Spg001840 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCTTTCTGCTTCTCTCTTTCTTGAGCATTTTGCTTCCCATTTTCATTCATCTCATGAGCTTTCACTCTCATCAAAATTGAAAACAATCGCTGTAATTCATTCCATCTGCATAAATCTCCTTCTCAACTTGATTCTCTCGTCGTCATGTTTGCCGTTTCGACGACATTTTTCTACTCTGTTTAACCGAGCATCGAAAATGGCGAGGCGTTGGGTCCTTTTGGCGGCCATTTTCGGGGTTTTCTTTTGTGGGTTTTCTTCAGTTTCTGCCACACCCACAAGTACGACCTACTTCTCTAACCTCGCCTCTTGTTTTTCTCTTCTCGTTCTTCATCTCTGTTTAGGCGTTTTCGTTTCATTTGCAGAAATTCTTGCTGGGGTTTTGTCCAAGGCGGTTTCGGCTCTTGTGAGTTGGATGTGGGCGATCAGCTCGGCCTCTAATACTGGTTTGATTCGTTTCCTTTGCCCTAGTTTTCAGCGTTTTCTGTGTGGTTGATCGATTTGTGGGGGTTTTGTTTTTGTTGATTTTTCAGCCGTTTCTACCCGGTCAATGATTAAATTTGAAGGGGGATATGTTGTTGAGACTGTGTTTGATGGTAGTAAGCTGGGGATTGAGCCTTACTCTGTTGGGGTATCTCCTAGTGGAGACCTTTTGATTTTGGATGCTGAAAATAGTAATGTTCACAAGATCTCTATGCCATTTTCTCAATGTAAGCCCTCTTTATGTATTGATTTATCAGCTCAATTGTGTAGGTTAGATTATATTTCTTGCCTTGAAACATTTTTTCTTGTTAGAATATAGTGTTATGAATGTGGGGTTGAGAATTCGATTCTTTGGCCGGTAGGGAAGATTATTAATGCCTTAACCGTTGAGGTAAACTCAAGTTGGATTTGGCACTAGACATGATACTTTGCTTTTTTAACGTTTTTGTCATTTCTTTTTCAATTTCAATCTTTATACTTTCAGTTTTATGAACGTCTTAAATAGTAACAGAACGTTCACATGAGATGACATTGGATGTATGCAAACTTATCGTAAATCAATGTAACATCTTTTGTGGTACATTGGCTTTTTACCAATGGAATTGCGTGAACTAAAATGAAATGGGTACCATGACCAAAAGATTAAAAAGTAGCAAATATAAAAATTAGCATTGTAAATGTAGAATTCTAATAGCTATGGTAATCAGTCCGTTTGCTTGTTCTTTGTCTAGACTTGTGGTAGCTGCTCGTACTTTGCTTCAAACTTTGGACATCTTTTCTTTTCTTTTCTCTTTTATGATTTTTTTTTTCAACAGATTCTTTGCCTTCTTTAAGTATTAGTTGATTCCAAATGTAGATCATAGTACTTTTACTTTGCTTACAAGCTTTTGTTTAGTAGAAGACTCTACTTTTTATTGTAAAACTATCCTTTTCAAAAGTTCTGCAGTCACATTAAAGATCTATATCTCTTATGTTAGACAAATATTGAGCTTCATTAGCTCTTAGTCCTTTAGCTTTACTTACCATGATTCAAGGCTTCGACGTACAAAATCAATCAATTGAAGTGTACTTTTCCTGTATCTAATAAGTTTGAGCTTCCTGAAGAAGACATGTATTGTCTTATTTGGTTGTTAGACCACCTCATTTCACTTTACTTTTCAAAGATATTAGTTTTGCAGTATCACGAGCATTTGGACCCACTTACATGTACTAAATAATTTTAGTAGCCAATAGCATGACATTAAAATATTTGATATTTAGAAGTTCGTGGAAGGCGATCAAGGTAACAAACTGATGAGTCATATAGGTAATTAGCTAGCAGTCTTGCAGTGTTTAATACTGAATTTACTTGAGTAGAATTCCTCATTGAATGATTTTAAGGAGTCAAAACTAGCTTAATATATTTGTACGAAAATTGCATGACAAGGCATATTTTATACTCTATTTTAAAAATATTGTTTTTTTTTTTCATATTGATGTAAATAGCATATTTTTTTACACCTAAGACCAATCAATGGTTTTTATCCTGTAATACTTCTACTTTTCATCCTACCAAGTGATATGCCATTCAGTCATATAATTCATGGTTTAAATTTTATAATTTTCTGTACTTGAATCTTAAATGAATAAATTTACATCATATCACTCAGTTTCATGCTGATTATTCGATAACTCGGGCAGGGTAAAATAGAATTGCTCTTTCTAGTTTGATGAACTATTCGTTACTCTAGTTTCTTCTTTTGCTGAAAGAAAGAGCCATATACAGTTTGCAGGCCCAAACTGTTAGCAGGATCATCTGAAGGATACTCTGGACATGTAGATGGAAAACTGAGGGATGCAAGAATGAGCCATCCAAGAGGGCTAACAGTGGATCAAAGAGGAAACATTTACATTGCAGATACAAAGAACAAGGCTATAAGAAAAATCAGTGATGCCGGTAATTTCCTAAATCAGTTCGAGAGCATTTTGCACCTTGAAAATGAATCTCGGCTTGTTGTCGACTTCTTGTTCATTAAGTTTACTAAAGAATCTCCATTCAGTTACACTTTGTAGCATTCAACTTCTTGGTTTTGGGATCCGTTAATTGTTTATAAGTCGTTTATAGTTTTTATGCAGGAGTTACAACTATTGCTGGCGGTAAATGGAGGAAAAGTGGCCACGTTGATGGTCTAAGTGAAGAATCAAAGTTCTCAAATGATTTTGATGTGGTTTATGTAGGAAGAAGCTGCTCACTTCTGGTAGTCGACAGAGGAAACCAGGCAATTCGGGAGATTCAACTCCGTGCCGATGATTGTACCAACGAATATGATGGTAGCTTCCTCCTAGGTACATTGTAGCCAGAACAAATCAACATTAGGTGCCATCTTTCTCTCCTCTTCAGCAAGCTATTAACTATATTCTGTTAATTGTAGGGATGGCTCTGCTGATTGCAGCTATGCTTTCAGGATACATGTTGGCACGTTTTCAATTTCGAGTGTTGGCAATGTTCTCTTCGAAAAATGTAACGCCATCTCAAATCTTACAAAACAAACAATAGCTGTCTTATTGTTAATGTAGCAATAGAGTGAAATATCCATCAGCATTGACATTTCCCAGTAGTTTTACTGATGTTTCTGCTTTATTGCTAAGAGGAGGGAGTGATTGACCAGGCTATTCAACATAGAATCAACTTGCAGTTACAGGTTTCTACCTTTCCTATACTTCTTTTCCTCTGAAAAATTTTCCTGTGTTTTGCAGGATTCAAGGACTGATGCAAGGAACATTACATCGATTCCTCCATTTTGGAGACCCGAGAAATCAGTCAGGCATCCATTGATTCCTAGTGGAGAGGAAGAAGATGTACCTGGAGAGAATATCATTTGTTCCCTGGGCAAGCTTTTCCTCAACACTGGTTCATCCGCGGCCGAAATCTTTGTGGCATTGCTTCTTGGAGCTAGAAGAAAGCCATCCCACCCCCACGTCCAGCAGCACTATCAAGTAAACAAACACGCGCAGTCACGGTTCGGCATACAGGGAAGCTTTGCAGTTCCACAGGGGCACGAACCACTGCATACAATGGTGAGCAAACCTTACTCTTATTCGGCAGCACAACTGGAAAATGTTCACTGTTACAGGCGCATGTGGGGCGACAATGGAGGACAGGAAGAACAACCATATCCATCGAGTCCAAAGATGTGGTACAACAGCTGTGAGAGGAATGAGGTTGTGTTTGGTGAAGTACAAGAAGAAGAGCAACTGTGTGAACAAAAGGAAGAGAAATGCTGCGTTGGTGGTGGCTGTGTAGAAAGGAGATCCTTCAGTACCAATAAAGATGAGAACTCTTTTGTTACAGAAAAAAGGAGAATGAGAGATTAGCAATTGATTGATTTCTCAATCTGAGTTGTATGATGATGTGATAAACTTATAAATTCTTTTGTTAAAAGAAATAGAATAAATGTTGAATATAAAATTTTACATTAAGGTAACAC ATGAGCCATCCAAGAGGGCTAACAGTGGATCAAAGAGGAAACATTTACATTGCAGATACAAAGAACAAGGCTATAAGAAAAATCAGTGATGCCGGAGTTACAACTATTGCTGGCGGTAAATGGAGGAAAAGTGGCCACGTTGATGGTCTAAGTGAAGAATCAAAGTTCTCAAATGATTTTGATGTGGTTTATGTAGGAAGAAGCTGCTCACTTCTGGTAGTCGACAGAGGAAACCAGGCAATTCGGGAGATTCAACTCCGTGCCGATGATTGTACCAACGAATATGATGGTAGCTTCCTCCTAGGGATGGCTCTGCTGATTGCAGCTATGCTTTCAGGATACATGTTGGCACGTTTTCAATTTCGAGTGTTGGCAATGTTCTCTTCGAAAAATGATTCAAGGACTGATGCAAGGAACATTACATCGATTCCTCCATTTTGGAGACCCGAGAAATCAGTCAGGCATCCATTGATTCCTAGTGGAGAGGAAGAAGATGTACCTGGAGAGAATATCATTTGTTCCCTGGGCAAGCTTTTCCTCAACACTGGTTCATCCGCGGCCGAAATCTTTGTGGCATTGCTTCTTGGAGCTAGAAGAAAGCCATCCCACCCCCACGTCCAGCAGCACTATCAAGTAAACAAACACGCGCAGTCACGGTTCGGCATACAGGGAAGCTTTGCAGTTCCACAGGGGCACGAACCACTGCATACAATGGTGAGCAAACCTTACTCTTATTCGGCAGCACAACTGGAAAATGTTCACTGTTACAGGCGCATGTGGGGCGACAATGGAGGACAGGAAGAACAACCATATCCATCGAGTCCAAAGATGTGGTACAACAGCTGTGAGAGGAATGAGGTTGTGTTTGGTGAAGTACAAGAAGAAGAGCAACTGTGTGAACAAAAGGAAGAGAAATGCTGCGTTGGTGGTGGCTGTGTAGAAAGGAGATCCTTCAGTACCAATAAAGATGAGAACTCTTTTGTTACAGAAAAAAGGAGAATGAGAGATTAG ATGAGCCATCCAAGAGGGCTAACAGTGGATCAAAGAGGAAACATTTACATTGCAGATACAAAGAACAAGGCTATAAGAAAAATCAGTGATGCCGGAGTTACAACTATTGCTGGCGGTAAATGGAGGAAAAGTGGCCACGTTGATGGTCTAAGTGAAGAATCAAAGTTCTCAAATGATTTTGATGTGGTTTATGTAGGAAGAAGCTGCTCACTTCTGGTAGTCGACAGAGGAAACCAGGCAATTCGGGAGATTCAACTCCGTGCCGATGATTGTACCAACGAATATGATGGTAGCTTCCTCCTAGGGATGGCTCTGCTGATTGCAGCTATGCTTTCAGGATACATGTTGGCACGTTTTCAATTTCGAGTGTTGGCAATGTTCTCTTCGAAAAATGATTCAAGGACTGATGCAAGGAACATTACATCGATTCCTCCATTTTGGAGACCCGAGAAATCAGTCAGGCATCCATTGATTCCTAGTGGAGAGGAAGAAGATGTACCTGGAGAGAATATCATTTGTTCCCTGGGCAAGCTTTTCCTCAACACTGGTTCATCCGCGGCCGAAATCTTTGTGGCATTGCTTCTTGGAGCTAGAAGAAAGCCATCCCACCCCCACGTCCAGCAGCACTATCAAGTAAACAAACACGCGCAGTCACGGTTCGGCATACAGGGAAGCTTTGCAGTTCCACAGGGGCACGAACCACTGCATACAATGGTGAGCAAACCTTACTCTTATTCGGCAGCACAACTGGAAAATGTTCACTGTTACAGGCGCATGTGGGGCGACAATGGAGGACAGGAAGAACAACCATATCCATCGAGTCCAAAGATGTGGTACAACAGCTGTGAGAGGAATGAGGTTGTGTTTGGTGAAGTACAAGAAGAAGAGCAACTGTGTGAACAAAAGGAAGAGAAATGCTGCGTTGGTGGTGGCTGTGTAGAAAGGAGATCCTTCAGTACCAATAAAGATGAGAACTCTTTTGTTACAGAAAAAAGGAGAATGAGAGATTAG MSHPRGLTVDQRGNIYIADTKNKAIRKISDAGVTTIAGGKWRKSGHVDGLSEESKFSNDFDVVYVGRSCSLLVVDRGNQAIREIQLRADDCTNEYDGSFLLGMALLIAAMLSGYMLARFQFRVLAMFSSKNDSRTDARNITSIPPFWRPEKSVRHPLIPSGEEEDVPGENIICSLGKLFLNTGSSAAEIFVALLLGARRKPSHPHVQQHYQVNKHAQSRFGIQGSFAVPQGHEPLHTMVSKPYSYSAAQLENVHCYRRMWGDNGGQEEQPYPSSPKMWYNSCERNEVVFGEVQEEEQLCEQKEEKCCVGGGCVERRSFSTNKDENSFVTEKRRMRD Homology
BLAST of Spg001840 vs. NCBI nr
Match: XP_008443491.1 (PREDICTED: uncharacterized protein LOC103487068 [Cucumis melo] >KAA0053690.1 NHL domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 534.3 bits (1375), Expect = 7.8e-148 Identity = 278/338 (82.25%), Postives = 296/338 (87.57%), Query Frame = 0
BLAST of Spg001840 vs. NCBI nr
Match: XP_004141183.2 (uncharacterized protein LOC101216407 [Cucumis sativus] >KGN59643.1 hypothetical protein Csa_001016 [Cucumis sativus]) HSP 1 Score: 527.7 bits (1358), Expect = 7.3e-146 Identity = 275/339 (81.12%), Postives = 295/339 (87.02%), Query Frame = 0
BLAST of Spg001840 vs. NCBI nr
Match: XP_038903583.1 (uncharacterized protein LOC120090138 [Benincasa hispida]) HSP 1 Score: 524.6 bits (1350), Expect = 6.2e-145 Identity = 277/343 (80.76%), Postives = 292/343 (85.13%), Query Frame = 0
BLAST of Spg001840 vs. NCBI nr
Match: KAG6581010.1 (hypothetical protein SDJN03_21012, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 514.2 bits (1323), Expect = 8.3e-142 Identity = 269/339 (79.35%), Postives = 289/339 (85.25%), Query Frame = 0
BLAST of Spg001840 vs. NCBI nr
Match: KAG7017751.1 (hypothetical protein SDJN02_19617, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 514.2 bits (1323), Expect = 8.3e-142 Identity = 269/339 (79.35%), Postives = 289/339 (85.25%), Query Frame = 0
BLAST of Spg001840 vs. ExPASy TrEMBL
Match: A0A5A7UER2 (NHL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G00630 PE=4 SV=1) HSP 1 Score: 534.3 bits (1375), Expect = 3.8e-148 Identity = 278/338 (82.25%), Postives = 296/338 (87.57%), Query Frame = 0
BLAST of Spg001840 vs. ExPASy TrEMBL
Match: A0A1S3B7P5 (uncharacterized protein LOC103487068 OS=Cucumis melo OX=3656 GN=LOC103487068 PE=4 SV=1) HSP 1 Score: 534.3 bits (1375), Expect = 3.8e-148 Identity = 278/338 (82.25%), Postives = 296/338 (87.57%), Query Frame = 0
BLAST of Spg001840 vs. ExPASy TrEMBL
Match: A0A0A0LCX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G835800 PE=4 SV=1) HSP 1 Score: 527.7 bits (1358), Expect = 3.5e-146 Identity = 275/339 (81.12%), Postives = 295/339 (87.02%), Query Frame = 0
BLAST of Spg001840 vs. ExPASy TrEMBL
Match: A0A6J1F447 (uncharacterized protein LOC111441944 OS=Cucurbita moschata OX=3662 GN=LOC111441944 PE=4 SV=1) HSP 1 Score: 505.8 bits (1301), Expect = 1.4e-139 Identity = 264/339 (77.88%), Postives = 289/339 (85.25%), Query Frame = 0
BLAST of Spg001840 vs. ExPASy TrEMBL
Match: A0A6J1J758 (uncharacterized protein LOC111481869 OS=Cucurbita maxima OX=3661 GN=LOC111481869 PE=4 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 1.1e-136 Identity = 263/339 (77.58%), Postives = 282/339 (83.19%), Query Frame = 0
BLAST of Spg001840 vs. TAIR 10
Match: AT1G70280.1 (NHL domain-containing protein ) HSP 1 Score: 213.8 bits (543), Expect = 2.2e-55 Identity = 143/336 (42.56%), Postives = 186/336 (55.36%), Query Frame = 0
BLAST of Spg001840 vs. TAIR 10
Match: AT1G70280.2 (NHL domain-containing protein ) HSP 1 Score: 213.8 bits (543), Expect = 2.2e-55 Identity = 143/336 (42.56%), Postives = 186/336 (55.36%), Query Frame = 0
BLAST of Spg001840 vs. TAIR 10
Match: AT1G23880.1 (NHL domain-containing protein ) HSP 1 Score: 207.6 bits (527), Expect = 1.6e-53 Identity = 134/326 (41.10%), Postives = 187/326 (57.36%), Query Frame = 0
BLAST of Spg001840 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein ) HSP 1 Score: 184.5 bits (467), Expect = 1.4e-46 Identity = 127/310 (40.97%), Postives = 181/310 (58.39%), Query Frame = 0
BLAST of Spg001840 vs. TAIR 10
Match: AT3G14860.2 (NHL domain-containing protein ) HSP 1 Score: 141.7 bits (356), Expect = 1.0e-33 Identity = 85/198 (42.93%), Postives = 118/198 (59.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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