Spg001837 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGGCCGAGGTGGGGTTGAGAATGATAAATCAGGAAAAAACCTCGTGTGGGATGGATATGTCCCACCAGTGTGTCAACCTGACCCATCCATCCTACGATTGAATCCTCAGTGTCAATGGGAGATAGCACGAGAGCCTATCCATGCAGGGATCGACCTCCCTGACAAGACCCCTGGGATTGGTCCGGCAATGGCAATTGCTCGCCAGATACAAGCGAAAGTCGGACAAAAGGTAGGTGTTGTGGGTTTAGTTCCTTGTGCTAAAGGTGGCACTTTAATCGAACAATGGATGAAAAACCCTAGCAATCCTAAAGCAACTTTTTACCAAAATTTCATTGAACGAATCAAAGCGTCAGATAAAGAAGGTGGAGTGGTGCGTGCTCTTTTCTGGCACCTAGGGGAAAGCGATGCGGCTATGAGTGACACTGCTCATAGATACAAAGACAACTTAAAGAAGTTCTTCACCGACATCCGCAATGATATAAAACCTAGATTTTTACCCATCATTATTGTTAAAGCAACCCTCTATGACTTTTTTATGAAGCATGATACTCATGATTTGCCAACAGTGAGGGCGGCACAAGAAGCACTCCAGCACGAGCTGCCGGACGTGGTGACCATCGACTCCTGGAAATTGCCTATAAACTTGACCACTCATGAAGGTTTTAACTTGGATCACGGTCATTTTAATACTACCACTGAGATTGCTTTGGGTAAATGGTTGGCTAATACCTACCTCTCTCATTATGGTCATTTACTGTAATCCTATTATTTATCATTTTCTAATCGCTAATAAGTAATCACTTATTTTATTTCAATAAAATCTTTCTTTTATCCTCTTTCTTAGATCTTATTTTTATTCCATCTTTAACATGATTAGTATTCCACATCATTTAAATATTTTAAATCTCTTCGGAACTTATAACTAAATTAAACACAAACATGCAATGGACAAAGCACATATTATAAGCTTTTATACAACCACTTTTCCTTTCTTGGGTTAATTAGAAAAAAATAGATTAAAAAAAAATTGAGAAATCAAGTTGTTTTGAAAAAAAATAGCGAAAACAAGTTAATATTTTGTCTTTATTGGGTTCTGTGGCTTCGAACAATGGTCCAATTGACTGGTCAAATGTGTCCAGTCAGCAACACTATGGATCTGTGGCTCGGATCCATGTATTTTTTTTTAAAGTTGATCCATGATTCTTTCACATCACTCACGACTACATAATTCGTTTTTTTTCAAATGATAACGTAATCCTTGTTTTTTTAATTTTAATTTTCTATTTTCAATTTTTACAAATGATAATGACTCTTCAATATGATGGGACATGACTCTTCGAGTTGAGGTGTCAGAGAAATGTTGAATAGTTGCAATGTATATTGGTAGGACATGACCGTTCAAATGACGATGTGACTCTTCGAGTGTATGTGTCTGTTCATTCAAATGTGTGCAATTAATATCGACAAGACACGACTATTAGGTGGAGGTAGTTATACATCAATAGATGCATCCATTCGCGTATGAATGCAATGCATGTATAAAAGCATTGAACTATGTTATATACTTATTTTTTTCGAGTTAGTTCTTCATTTATTGACTTGCATGTATTCTTAAGTGATTTTTTTGCAAAGCAGGTTGTTGTTGTTGAGATTCATGAATTTCGTAGTTATATTATTTGTATCTTTAGATTCAAGAGTTGTTATTTCATGAAATTCTCTTTATTTCCTAAGTATATTATCTATGACGAAAGAGATTATCGTGGTCTCTTGTCAAATAAATTTATAATCCACGATTCCTAAAGCTAACTTGTAGCAGTAGTGGTCAGGGTCGATCACAGGGAACAATCGGTTTATTTCTAAATTCTTTAGTGTGTTTGAGGTAACCAACAGTGGGGGGGGGGGGGTTTATTGATAAAAGATTAAGACATAAAGTAAATGCGGAAAAATAAATAAGGAAAATTAAATGCAAGGAAAGTAAAAGCGGAGTTAGTTGATCTTACCACGAGGATCACTGGAATCGGGGTTGAACTCGATGTTAAGTTTGATTAATTTCATTCATCGATTATCAATTGATTTTAATTAACTATCTAAGTCCGACGTACTCCAGCAACAAACCGAGAGCCATGATCCAACTATCACAAACATGCAAACGCTAAGTTTGATTCTAGTTTAAATTAATTAATATGCCTATTAACTAATCTAAACTGCATTGGAATCTAGCCGAATTAATTCACATGCAACGGTCAACAAACCACAATTACAATTGATTAAATCATTTAGTTCTAGGGACGCATGCGTATAATCATAACGTTAACCTATTTGCTACTTAGATTTAGCAAGTAAATTTAGAGAGGGCGGTCAATGTTGTCAATCTTTCCTACCACAATCTAAACTTATAGAAAAAGAACTAAAATCACAAATACAATTAACTAAGTAATGAAGAATGGAAATCTCATAAAATTGAATCAAACTTACAAATCGAGGTCCCGATTACAACGATCCAAGCTTAGTTGGCCATAAACAAGCACCTCCAAGCTCGAGGCTCGATCAACCGACCCTTAGACTAAGAAAAACTTTAAAAACTAAGAAGAATGGTGGAGAAAGGGGAGAGAGATGGACTACAATGTTGTAGTGAATTGTGTATTGAGGGATGATTCTAAACCTACACCAAGGCCCTCTATTTATAGTGATTCTTGGCCTTCAATTCGTGGTCATTTGGTGCTGAATTGGGTCTTCAAACAAGGAAAATTTCCAGCCAAAATAGGAAAAATTTGATTCTGAAAAACTGCCTAGCGTCGCGACGCTGTTCCTTCAATTTTGGAAAATATCTCTCGGATTGCCCTAGTGTCGTGACGCTGTTGCCAGCTTGATCTCCAAGTTGCTTCCTTATTTGGCTAGCATCTCGACTCTGATGATGGACTTCTCGACGCTGATGAGGCTCCAGGGGCAAAATGGTCATTTTACGCTCCGGTTTCGCTCGTTTTAGCCCAGAATTGCTTCCAAAGCTCCGGTGAGGACTTATAG ATGGCTGGCCGAGGTGGGGTTGAGAATGATAAATCAGGAAAAAACCTCGTGTGGGATGGATATGTCCCACCAGTGTGTCAACCTGACCCATCCATCCTACGATTGAATCCTCAGTGTCAATGGGAGATAGCACGAGAGCCTATCCATGCAGGGATCGACCTCCCTGACAAGACCCCTGGGATTGGTCCGGCAATGGCAATTGCTCGCCAGATACAAGCGAAAGTCGGACAAAAGGTAGGTGTTGTGGGTTTAGTTCCTTGTGCTAAAGGTGGCACTTTAATCGAACAATGGATGAAAAACCCTAGCAATCCTAAAGCAACTTTTTACCAAAATTTCATTGAACGAATCAAAGCGTCAGATAAAGAAGGTGGAGTGGTGCGTGCTCTTTTCTGGCACCTAGGGGAAAGCGATGCGGCTATGAGTGACACTGCTCATAGATACAAAGACAACTTAAAGAAGTTCTTCACCGACATCCGCAATGATATAAAACCTAGATTTTTACCCATCATTATTGTTAAAGCAACCCTCTATGACTTTTTTATGAAGCATGATACTCATGATTTGCCAACAGTGAGGGCGGCACAAGAAGCACTCCAGCACGAGCTGCCGGACGTGGTGACCATCGACTCCTGGAAATTGCCTATAAACTTGACCACTCATGAAGGTTTTAACTTGGATCACGGTCATTTTAATACTACCACTGAGATTGCTTTGGGACATGACCGTTCAAATGACGATGTGACTCTTCGAGTGTATGTGTCTGTTCATTCAAATCATCTCGACTCTGATGATGGACTTCTCGACGCTGATGAGGCTCCAGGGGCAAAATGGTCATTTTACGCTCCGGTTTCGCTCGTTTTAGCCCAGAATTGCTTCCAAAGCTCCGGTGAGGACTTATAG ATGGCTGGCCGAGGTGGGGTTGAGAATGATAAATCAGGAAAAAACCTCGTGTGGGATGGATATGTCCCACCAGTGTGTCAACCTGACCCATCCATCCTACGATTGAATCCTCAGTGTCAATGGGAGATAGCACGAGAGCCTATCCATGCAGGGATCGACCTCCCTGACAAGACCCCTGGGATTGGTCCGGCAATGGCAATTGCTCGCCAGATACAAGCGAAAGTCGGACAAAAGGTAGGTGTTGTGGGTTTAGTTCCTTGTGCTAAAGGTGGCACTTTAATCGAACAATGGATGAAAAACCCTAGCAATCCTAAAGCAACTTTTTACCAAAATTTCATTGAACGAATCAAAGCGTCAGATAAAGAAGGTGGAGTGGTGCGTGCTCTTTTCTGGCACCTAGGGGAAAGCGATGCGGCTATGAGTGACACTGCTCATAGATACAAAGACAACTTAAAGAAGTTCTTCACCGACATCCGCAATGATATAAAACCTAGATTTTTACCCATCATTATTGTTAAAGCAACCCTCTATGACTTTTTTATGAAGCATGATACTCATGATTTGCCAACAGTGAGGGCGGCACAAGAAGCACTCCAGCACGAGCTGCCGGACGTGGTGACCATCGACTCCTGGAAATTGCCTATAAACTTGACCACTCATGAAGGTTTTAACTTGGATCACGGTCATTTTAATACTACCACTGAGATTGCTTTGGGACATGACCGTTCAAATGACGATGTGACTCTTCGAGTGTATGTGTCTGTTCATTCAAATCATCTCGACTCTGATGATGGACTTCTCGACGCTGATGAGGCTCCAGGGGCAAAATGGTCATTTTACGCTCCGGTTTCGCTCGTTTTAGCCCAGAATTGCTTCCAAAGCTCCGGTGAGGACTTATAG MAGRGGVENDKSGKNLVWDGYVPPVCQPDPSILRLNPQCQWEIAREPIHAGIDLPDKTPGIGPAMAIARQIQAKVGQKVGVVGLVPCAKGGTLIEQWMKNPSNPKATFYQNFIERIKASDKEGGVVRALFWHLGESDAAMSDTAHRYKDNLKKFFTDIRNDIKPRFLPIIIVKATLYDFFMKHDTHDLPTVRAAQEALQHELPDVVTIDSWKLPINLTTHEGFNLDHGHFNTTTEIALGHDRSNDDVTLRVYVSVHSNHLDSDDGLLDADEAPGAKWSFYAPVSLVLAQNCFQSSGEDL Homology
BLAST of Spg001837 vs. NCBI nr
Match: XP_023002177.1 (probable carbohydrate esterase At4g34215 [Cucurbita maxima] >XP_023002870.1 probable carbohydrate esterase At4g34215 [Cucurbita maxima] >XP_023002871.1 probable carbohydrate esterase At4g34215 [Cucurbita maxima]) HSP 1 Score: 399.8 bits (1026), Expect = 2.0e-107 Identity = 188/239 (78.66%), Postives = 209/239 (87.45%), Query Frame = 0
BLAST of Spg001837 vs. NCBI nr
Match: XP_023002892.1 (probable carbohydrate esterase At4g34215 [Cucurbita maxima]) HSP 1 Score: 399.8 bits (1026), Expect = 2.0e-107 Identity = 188/239 (78.66%), Postives = 209/239 (87.45%), Query Frame = 0
BLAST of Spg001837 vs. NCBI nr
Match: XP_023537877.1 (probable carbohydrate esterase At4g34215 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 397.9 bits (1021), Expect = 7.7e-107 Identity = 188/239 (78.66%), Postives = 208/239 (87.03%), Query Frame = 0
BLAST of Spg001837 vs. NCBI nr
Match: XP_023537881.1 (probable carbohydrate esterase At4g34215 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 397.9 bits (1021), Expect = 7.7e-107 Identity = 188/239 (78.66%), Postives = 208/239 (87.03%), Query Frame = 0
BLAST of Spg001837 vs. NCBI nr
Match: XP_022951887.1 (probable carbohydrate esterase At4g34215 [Cucurbita moschata]) HSP 1 Score: 396.7 bits (1018), Expect = 1.7e-106 Identity = 187/239 (78.24%), Postives = 208/239 (87.03%), Query Frame = 0
BLAST of Spg001837 vs. ExPASy Swiss-Prot
Match: Q8L9J9 (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g34215 PE=1 SV=2) HSP 1 Score: 146.4 bits (368), Expect = 5.3e-34 Identity = 85/239 (35.56%), Postives = 125/239 (52.30%), Query Frame = 0
BLAST of Spg001837 vs. ExPASy TrEMBL
Match: A0A6J1KIR8 (probable carbohydrate esterase At4g34215 OS=Cucurbita maxima OX=3661 GN=LOC111496116 PE=4 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 9.9e-108 Identity = 188/239 (78.66%), Postives = 209/239 (87.45%), Query Frame = 0
BLAST of Spg001837 vs. ExPASy TrEMBL
Match: A0A6J1KKV2 (probable carbohydrate esterase At4g34215 OS=Cucurbita maxima OX=3661 GN=LOC111496632 PE=4 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 9.9e-108 Identity = 188/239 (78.66%), Postives = 209/239 (87.45%), Query Frame = 0
BLAST of Spg001837 vs. ExPASy TrEMBL
Match: A0A6J1GIW6 (probable carbohydrate esterase At4g34215 OS=Cucurbita moschata OX=3662 GN=LOC111454624 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 8.3e-107 Identity = 187/239 (78.24%), Postives = 208/239 (87.03%), Query Frame = 0
BLAST of Spg001837 vs. ExPASy TrEMBL
Match: A0A6J1GIR0 (probable carbohydrate esterase At4g34215 OS=Cucurbita moschata OX=3662 GN=LOC111454623 PE=4 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 2.7e-105 Identity = 185/239 (77.41%), Postives = 207/239 (86.61%), Query Frame = 0
BLAST of Spg001837 vs. ExPASy TrEMBL
Match: A0A6J1I774 (probable carbohydrate esterase At4g34215 OS=Cucurbita maxima OX=3661 GN=LOC111471873 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.7e-104 Identity = 182/240 (75.83%), Postives = 206/240 (85.83%), Query Frame = 0
BLAST of Spg001837 vs. TAIR 10
Match: AT3G53010.1 (Domain of unknown function (DUF303) ) HSP 1 Score: 159.5 bits (402), Expect = 4.3e-39 Identity = 97/243 (39.92%), Postives = 136/243 (55.97%), Query Frame = 0
BLAST of Spg001837 vs. TAIR 10
Match: AT4G34215.1 (Domain of unknown function (DUF303) ) HSP 1 Score: 146.4 bits (368), Expect = 3.8e-35 Identity = 85/239 (35.56%), Postives = 125/239 (52.30%), Query Frame = 0
BLAST of Spg001837 vs. TAIR 10
Match: AT4G34215.2 (Domain of unknown function (DUF303) ) HSP 1 Score: 146.4 bits (368), Expect = 3.8e-35 Identity = 85/239 (35.56%), Postives = 125/239 (52.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|