Spg001822 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg001822
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	nuclear pore complex protein GP210 isoform X1
Location	scaffold10: 2312865 .. 2318303 (-)
RNA-Seq Expression	Spg001822
Synteny	Spg001822

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTGAGGCGCAGCCAGGCGCTCGCCTATAGCGAGAGGCAAGGAGAGGAGAGGCCTTCACGCCTTGCAAGTACCCAAGGCGAGCACCTTCAATAAGGCACTCGCCTTTTGGGCCTTTCAATCGCCTTGAACATATGTTCAAGGCAACACGACGCTCGCCTTCATGAAGGCAACCAATTTTTCTTCGATTCTACTCCAAATTTTACGTTTTGCTTCCAATTTTCTTCTTCAATTCTTTGATTAAAAAGAAAAATTGAAGTTCAAAGAGGAAGAATTAAAGGGAAAAAAAAGGGAAGAATCAAGAAAGAACTAAAGAAAAAAAATAGTCAAAGAAGTAAGATAAAGAATCAAAGAACCATCTCTTTTTTGACCGACCATCTATCAGTAGTTTATCAAAGAAGAAGGAAATGAAGAAGAAGGGTTGGAATTTGGAAGGGAAGAAGAAAAGTCGATAAAAGAGCTCCATCTTCTCTTTCAGTCTTTCTTACATTTCCTAGAAGATTTGAACGGTTGGGTACCAACATTAAAGAAGTGGCTGCCAGCAATAAAGAAAGGCTGTGTGCATGCTACCCAAACTGCCAAATGGCAATATTTCTACTTTTCTAAGTACATACTCAGACCACTATTTATTTACCTATTGAAAAAGCATTTCTATTTCAATTTCTTTTTAAATATCTTTCTTTTCTCAACATATTTTTATTTCAATCTTAAATGATTTTATTAATATTTTGACATTTCAAAAATGAGGTATTTTTTTATATAATCATATTTATTTATTATTTTATTAGGTGTTTCTTGCTTTAGTCGGGCGATGCCTTTTTGTCACTTCTCACCTTGAGGCATTTAAAAAGCCTGTCGCCTTAGAGTGCGCCTTGCGCTTTGAAAACACTACCAATGATTGTCTCATACTCGAAAAAGTCTCCATCCAACTCCTAGATAACAAAATTCTATTTATTCTACTACGTGTCCTACTATTGGCCCAGGTAAAACTTCCGTTCACTGGGGGACAAAAAAGACAACAACCCTCAATCAACTCATTGAACTGCTTCATAAACTTCTTCACCCTATTGCCTAACGCGGAAAGGGGTCGAGTAACATTAAAATCCCCCACTAGGCACCAACCAGGCCTACAATGGCAAAACGGATCACCCAATTCATTCCAAAACTTTTTCCTACCTCTAGGCAGCGTGGGCCATAAACCTCAGTGACCTAACCCACCTCCTTATCCTGAACCCTAAAAGAGATAAAAATGGAGAACACGCTTTTAACCACTTTCTAAACCCCCACCAGGTTACCATCCCACAAAACAAGCACGCCCCTATAGACTCGTGTCATGATAATTCTCGTCTTCGAAAATGATTTTTCAAATACGCACCTCATGATCAGGATTTTTTTCTTTTTCAATTTTTTCTCGTTGGGGGACGGGGGTTGAAACTCAGGCATAAACAGTTTGTTTTATGGATTTTACTATAAATAATGTGTAGGTTTCAATGATCAACTTTCTGGCCGGTGGATTACAACCAATGAAAGTGTTGTATCTGTGGATACGCATTCTGGAGTAGCTGAAGCAGTCGGTCCAGGTTCAACAGAAGGTACCTGATGTCTTAACCAATCACTGTGCTAGATTTGTTACTGTATTTTTAAAGAACTTATATTTTTATCTGATTTTACTTTACCAATTGTTAAGTAATCCATAACCCGTTCCATGCTGACAGTACTATTTGAAGGTTCAAATTTGAACTTACGGACTACAGTGACGGTGCAGAATGGGTACACTGTGTCCGTCATTGCTCCAGTTGAAATTCTGACAAATGTTCCGTTCCCAGCAAAAGGATACAACTTCTCTGTGAATTTCAGGTTTGTAGATTTGCATGCATGTGAACATAGGATATTAGATTTCACTCTGTCACCATATGAATTTTGGAAATATCTTTGTCAGTGACTCAGTAGTGAACTAATTTTCTTTTGTTAAAATTGAACGATAGACAGCAGTTTTACCATATCTAATGACGCTTTCATGTTGAAGTTTTTTGAGGATGTAATTCAGTGTTTAAATTCCCTGACCAGCTAATTGGACGATAGTATTTTTTTTTTGGGGCGAATTTACCTTTTTGGTTCTGAAGTTCCTAAGAACTGTTCTATTTAGTCCCTTCCCTTCTAAAGGGGAGCTTTTAACCCTGAATTTAGAATCATTCAAAATATTAGTTTTTAATTAGTAATAGTAAAGGAAAGTTGGTGGGACTTTTTTCTTTTTTCATTTATTAATTTTATAATATTTTCTGATCCGGTTATAATTGATTAATTATATATTCTTCCGTTACTTACATAGTAAATTTATTAATTTACTTAAAATTAATAATTAATTATTAATTAGAGTTTAAAGCTTGGGGATTGAGGAATCTTTTCTGTGAAAAATACCGTAGAAACTGTTAAAGTGTCAAGTTTCTTCTGATTTCTTTCTTTTTATTACAGTGGCAAAGATGGAACTCTTCTAAATGATAAGAGAGTCCTGCACGACTGTAGAGTAGACCCTCCCTTTGTTGGGTATGTTGCGATATAATTCTTTTCTTCCTCCCCATATTCTTGAATTGAGTAATTGACTATTCATACATTTTCTTTTTTATGGATTAAAGATATGCAAAGCCATGGTTGGATCTTGACTATGGCAATTTATATTGCCTCTTCTTCCCTTACTCACCGGAGCACTTGGCACATTCAGTGCCCCAGCTGAAGGCCATGAGACCAGATATATCTGTTACTATCTATGCTTCATCTCGAGAAGCCAACCAAATTTCTGGATCTGCTTCTGCACTTTTTATTGGGGGCTTTTCAGTTATGGAGATGGGCAAGGTAATTCAGTCATTAATAAACACCTGTATTTTATTTATCAGGAAACTGAAATTGGAATAATATATCCAGACGTGACTTCCAATCAGATCAGAACAGTCCATAAGAAGCTCATAAATTCATTACAAAAAAGAAAATTAATCATTTAAGTTCTTTCTATTCTGTCCAAGAACTGAGTTATTTTGGATAATGTTACAAAGATTTTTGTTAAGTGAAGCGTGTTTAAACCATCTATTATCTCCATGAAGGTATTTTAAAATTCTCTCTTTTTTCAAAGAAAAATAATAATAATTCCCAATAGTTCAACTAAGTTTGGTCCAACTCTTTAATTTACCTTCTCAGTAAGATTAATTTGTATTCCAAGATAATTTGGTGTATGATTTTATTTATCAAATTTTGACTATTTCCAAATTCCAGAGTGCAACACAATTGATTCTGACTCCAGACTCGAACAAGACTGTTATAACCATCTTGGGGAACACAGGTAAGCTAACAACTTTATATTATCCTGTTCTAAGAGAGAATTTGTAATATAATATTAGGTCGGTCAAATTCTCTGTACAACTTCCTATAAATTTTAGGGAATCTCTAATATGTTCGATAATGTTAACGTGGATTCTTTTTCCTATGAAAAGATAATAATTATATGATGTTTTAAAATGTAATATATTTGTAGATCTGCCAAATTCTATCTAGAGCTCCCCTACATAAACTTGAGACTGTCTCATATGGTTCGATTAAAGTTTTGGAGGATTCCTCCTGTTAAAAGATAATAATTATGTCTCGTAAATTGAAATCATGGCCCATTGGCTGTGTGCATGCTTATCACCATAAAGGTTCGATCTTGCTCGTCGCTGTTAGTTACTATCCCAAAAGATAATACTGTGTCTCATATAGTTCAATAAAATTGTTTAAAGGCTTTCTTCTTCCTTTATTTTATCTTCTTGAGCGCATCCTTTGGATATATTAGACCAGTTTTGTGGTTGCTGAAGATTGTACAGGCATAACTATTTTTCATCATACATTAGTACAACGAAGTTGGTAAGGTTTCTGAGATATTCTTGGAAAACGACAGGCTTTGGACGTTTCATTCGTATAGTGTCATAATTAAGAAATTTCCATTATTGACAACTATTATAGGCTCGTATTATAGCTGAAACCTTTTTAAGTCGCCCATTTAGCTGTCTCTGTTTACTTGTTACTGCCAGCAATATTTCAGTAATCCCTATAATAGATAACTTCCAGTACACACTGCACCTGTCTCATTCCTGGGCCACTAATATTACTGTAAGAAAATATCATGTGTGTATCTTAAACTGAATGGTGCTAATGATATTTGCTTTTCTACTATCATAGACGTTGAACTTCATTGGCATGAACGCGATTTGGTGATCGTCGGTCCCATTTCTAAAGAAGAATCTGGCATTGCTGGTCGTACAGAGTATGAAGTAAGTTTGGCCGTTTATAATATTTACTCACAATCCAATCAACTTTTCAAATAGTTTAGGTATATACTGAATACAGAATATGAAGTAAGTTCAATTCAGTGGTAGATTAAGGATTTTTCTTATATTCCTTTCCAAAGGCCAGATCTCATGTTGTATTGCTAATCACATCATCTATACTCAGGTGAAAGCAATGGGAACGAAGAGATTCAAAGATAAAATTCTCATCACATTGGCTGCCAACGGTAAGCTGTTTTTACTCTATTACTAAGACTGCCCCTTCATCATTCTTTCTTTTTCTGTTTTTTGTGTGGGGGAGTGTAGGGGGTTGAATCAGTAACATCACAAGTTGAAATGCATGGTGGTGGTATTTGTTGCAGGCCAGAGAACAGAAATTGATGTCTTCTATGAACCCAGAGAAAGAGAAGCACCAGAAACCACCTTCGATGCGACAACCATTTGGGCTACGATACTTGGCTCTCTCTCCTTGCTCATATTGACTATTACTTTATTCATTTGTTTCATGGACAAACCTAACAGAGCTCAGCCCTCTCAGCCCTCTCGGCCTGCCATTACTCATACTCCAACTGTTACAGCACCTGTCACGCCTGATCGCAGAAGCCCTGTTGTCTCGAACGAACAATCTCCTCGAACACCACAACCATTTGTAGACTATGTGAGGCAAACCATTGATGAGACTCCATATTACAAACGTGAGGGAAGACGGAGATTCAATGTGCAAAATACCTTCTAGGCTTCTAGCTTTGTATTATAGAACAAACAGACATTCTCAACACTATGCCATGAAGAGGACTTGAACCTCTGGCTGTTTTGGTCCTCCTTTTATTGGGCTCCATTTTCACACTTTTCTTTGGGGAGGTTCAAGTTTTAACATGTAAGTCCCAGATTGTGGAAGTGGTTTAATGTTTGATTGAAATTATGGGATTGCAATGTTTTGCAACTCCTTTATTCATTTTCAGAGTAATAGGTTAGAAATTAGAATCATGCTAGAGGATGATTGTATTGTACTTAGGAGCATGTTCTCATTTTATGGGAGTCTTCATCTGGGAAAAGTGGCTTTGAACTATTGGGAACATTGAGTTGCAAATTTGTAAAGCTAGTATGATTATTAATCAAAGAGACT

mRNA sequence

ATGGTGTTGAGGCGCAGCCAGGCGCTCGCCTATAGCGAGAGGCAAGGAGAGGAGAGGCCTTCACGCCTTGCAAGTTTCAATGATCAACTTTCTGGCCGGTGGATTACAACCAATGAAAGTGTTGTATCTGTGGATACGCATTCTGGAGTAGCTGAAGCAGTCGGTCCAGGTTCAACAGAAGTACTATTTGAAGGTTCAAATTTGAACTTACGGACTACAGTGACGGTGCAGAATGGGTACACTGTGTCCGTCATTGCTCCAGTTGAAATTCTGACAAATGTTCCGTTCCCAGCAAAAGGATACAACTTCTCTGTGAATTTCAGTGGCAAAGATGGAACTCTTCTAAATGATAAGAGAGTCCTGCACGACTGTAGAGTAGACCCTCCCTTTGTTGGATATGCAAAGCCATGGTTGGATCTTGACTATGGCAATTTATATTGCCTCTTCTTCCCTTACTCACCGGAGCACTTGGCACATTCAGTGCCCCAGCTGAAGGCCATGAGACCAGATATATCTGTTACTATCTATGCTTCATCTCGAGAAGCCAACCAAATTTCTGGATCTGCTTCTGCACTTTTTATTGGGGGCTTTTCAGTTATGGAGATGGGCAAGAGTGCAACACAATTGATTCTGACTCCAGACTCGAACAAGACTGTTATAACCATCTTGGGGAACACAGACGTTGAACTTCATTGGCATGAACGCGATTTGGTGATCGTCGGTCCCATTTCTAAAGAAGAATCTGGCATTGCTGGTCGTACAGAGTATGAAGTGAAAGCAATGGGAACGAAGAGATTCAAAGATAAAATTCTCATCACATTGGCTGCCAACGGCCAGAGAACAGAAATTGATGTCTTCTATGAACCCAGAGAAAGAGAAGCACCAGAAACCACCTTCGATGCGACAACCATTTGGGCTACGATACTTGGCTCTCTCTCCTTGCTCATATTGACTATTACTTTATTCATTTGTTTCATGGACAAACCTAACAGAGCTCAGCCCTCTCAGCCCTCTCGGCCTGCCATTACTCATACTCCAACTGTTACAGCACCTGTCACGCCTGATCGCAGAAGCCCTGTTGTCTCGAACGAACAATCTCCTCGAACACCACAACCATTTGTAGACTATGTGAGGCAAACCATTGATGAGACTCCATATTACAAACGTGAGGGAAGACGGAGATTCAATGTGCAAAATACCTTCTAG

Coding sequence (CDS)

ATGGTGTTGAGGCGCAGCCAGGCGCTCGCCTATAGCGAGAGGCAAGGAGAGGAGAGGCCTTCACGCCTTGCAAGTTTCAATGATCAACTTTCTGGCCGGTGGATTACAACCAATGAAAGTGTTGTATCTGTGGATACGCATTCTGGAGTAGCTGAAGCAGTCGGTCCAGGTTCAACAGAAGTACTATTTGAAGGTTCAAATTTGAACTTACGGACTACAGTGACGGTGCAGAATGGGTACACTGTGTCCGTCATTGCTCCAGTTGAAATTCTGACAAATGTTCCGTTCCCAGCAAAAGGATACAACTTCTCTGTGAATTTCAGTGGCAAAGATGGAACTCTTCTAAATGATAAGAGAGTCCTGCACGACTGTAGAGTAGACCCTCCCTTTGTTGGATATGCAAAGCCATGGTTGGATCTTGACTATGGCAATTTATATTGCCTCTTCTTCCCTTACTCACCGGAGCACTTGGCACATTCAGTGCCCCAGCTGAAGGCCATGAGACCAGATATATCTGTTACTATCTATGCTTCATCTCGAGAAGCCAACCAAATTTCTGGATCTGCTTCTGCACTTTTTATTGGGGGCTTTTCAGTTATGGAGATGGGCAAGAGTGCAACACAATTGATTCTGACTCCAGACTCGAACAAGACTGTTATAACCATCTTGGGGAACACAGACGTTGAACTTCATTGGCATGAACGCGATTTGGTGATCGTCGGTCCCATTTCTAAAGAAGAATCTGGCATTGCTGGTCGTACAGAGTATGAAGTGAAAGCAATGGGAACGAAGAGATTCAAAGATAAAATTCTCATCACATTGGCTGCCAACGGCCAGAGAACAGAAATTGATGTCTTCTATGAACCCAGAGAAAGAGAAGCACCAGAAACCACCTTCGATGCGACAACCATTTGGGCTACGATACTTGGCTCTCTCTCCTTGCTCATATTGACTATTACTTTATTCATTTGTTTCATGGACAAACCTAACAGAGCTCAGCCCTCTCAGCCCTCTCGGCCTGCCATTACTCATACTCCAACTGTTACAGCACCTGTCACGCCTGATCGCAGAAGCCCTGTTGTCTCGAACGAACAATCTCCTCGAACACCACAACCATTTGTAGACTATGTGAGGCAAACCATTGATGAGACTCCATATTACAAACGTGAGGGAAGACGGAGATTCAATGTGCAAAATACCTTCTAG

Protein sequence

MVLRRSQALAYSERQGEERPSRLASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLFICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF

Homology

[Close]

BLAST of Spg001822 vs. NCBI nr
Match: XP_022934340.1 (nuclear pore complex protein GP210 isoform X1 [Cucurbita moschata])

HSP 1 Score: 663.7 bits (1711), Expect = 1.0e-186
Identity = 330/379 (87.07%), Postives = 348/379 (91.82%), Query Frame = 0


Query: 23   LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTV 82
            +  FN QLSGRW TTN SV+SVD  SG+A+AVGPGSTEVLFEGSNLNLRTT TVQ GYT+
Sbjct: 1582 IKGFNGQLSGRWTTTNGSVLSVDMLSGIAKAVGPGSTEVLFEGSNLNLRTTATVQTGYTL 1641

Query: 83   SVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDY 142
            SV+AP EILTNVPFPAKGYNFSVNFSGK GTLLNDKRVLHDCRVDP FVGYAKPWLDLD 
Sbjct: 1642 SVVAPAEILTNVPFPAKGYNFSVNFSGKHGTLLNDKRVLHDCRVDPLFVGYAKPWLDLDN 1701

Query: 143  GNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEM 202
             N YCLFFPYSPEHLAHS P+LKAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEM
Sbjct: 1702 DNSYCLFFPYSPEHLAHSAPKLKAMRPDISVTIYASSREGSQISGSASALFIGGFSVMEM 1761

Query: 203  GKSATQLILTPDSNKTVITILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMG 262
            GKSATQLILTPDSNKTVITILGNTDVEL+ HERDLVI+GPISKE+SG+ G +EYEVKAMG
Sbjct: 1762 GKSATQLILTPDSNKTVITILGNTDVELYCHERDLVIIGPISKEDSGVGGHSEYEVKAMG 1821

Query: 263  TKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF 322
            TKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Sbjct: 1822 TKRFKDKIIITLAANGQRTEIDVFYEPREKEVSVGAFGTTTIWATILGSLFLLILTIALF 1881

Query: 323  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTID 382
            ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTID
Sbjct: 1882 ICFLDKPNRAQPSQPSRPATTHTPTITAPVTPDRSSPVLSNEQSPRTPQPFVDYVRQTID 1941

Query: 383  ETPYYKREGRRRFNVQNTF 402
            ETPYYKREGRRRFNVQNTF
Sbjct: 1942 ETPYYKREGRRRFNVQNTF 1960

[Close]

BLAST of Spg001822 vs. NCBI nr
Match: XP_022934341.1 (nuclear pore complex protein GP210 isoform X2 [Cucurbita moschata])

HSP 1 Score: 663.7 bits (1711), Expect = 1.0e-186
Identity = 330/379 (87.07%), Postives = 348/379 (91.82%), Query Frame = 0


Query: 23   LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTV 82
            +  FN QLSGRW TTN SV+SVD  SG+A+AVGPGSTEVLFEGSNLNLRTT TVQ GYT+
Sbjct: 1349 IKGFNGQLSGRWTTTNGSVLSVDMLSGIAKAVGPGSTEVLFEGSNLNLRTTATVQTGYTL 1408

Query: 83   SVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDY 142
            SV+AP EILTNVPFPAKGYNFSVNFSGK GTLLNDKRVLHDCRVDP FVGYAKPWLDLD 
Sbjct: 1409 SVVAPAEILTNVPFPAKGYNFSVNFSGKHGTLLNDKRVLHDCRVDPLFVGYAKPWLDLDN 1468

Query: 143  GNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEM 202
             N YCLFFPYSPEHLAHS P+LKAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEM
Sbjct: 1469 DNSYCLFFPYSPEHLAHSAPKLKAMRPDISVTIYASSREGSQISGSASALFIGGFSVMEM 1528

Query: 203  GKSATQLILTPDSNKTVITILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMG 262
            GKSATQLILTPDSNKTVITILGNTDVEL+ HERDLVI+GPISKE+SG+ G +EYEVKAMG
Sbjct: 1529 GKSATQLILTPDSNKTVITILGNTDVELYCHERDLVIIGPISKEDSGVGGHSEYEVKAMG 1588

Query: 263  TKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF 322
            TKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Sbjct: 1589 TKRFKDKIIITLAANGQRTEIDVFYEPREKEVSVGAFGTTTIWATILGSLFLLILTIALF 1648

Query: 323  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTID 382
            ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTID
Sbjct: 1649 ICFLDKPNRAQPSQPSRPATTHTPTITAPVTPDRSSPVLSNEQSPRTPQPFVDYVRQTID 1708

Query: 383  ETPYYKREGRRRFNVQNTF 402
            ETPYYKREGRRRFNVQNTF
Sbjct: 1709 ETPYYKREGRRRFNVQNTF 1727

[Close]

BLAST of Spg001822 vs. NCBI nr
Match: XP_022982534.1 (nuclear pore complex protein GP210 isoform X2 [Cucurbita maxima])

HSP 1 Score: 663.3 bits (1710), Expect = 1.3e-186
Identity = 331/379 (87.34%), Postives = 347/379 (91.56%), Query Frame = 0


Query: 23   LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTV 82
            +  FN QLSGRW TTN SV+SVD  SG+AEAVGPGSTEVLFEGSNLNLRTT TVQ GYT+
Sbjct: 1349 IKGFNGQLSGRWTTTNGSVLSVDMLSGIAEAVGPGSTEVLFEGSNLNLRTTATVQTGYTL 1408

Query: 83   SVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDY 142
            SV+AP EILTNVPFPAKGYNFSVN SGK GTLLNDKRVLHDCRVDP FVGYAKPWLDLD 
Sbjct: 1409 SVVAPAEILTNVPFPAKGYNFSVNCSGKHGTLLNDKRVLHDCRVDPLFVGYAKPWLDLDN 1468

Query: 143  GNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEM 202
             NLYCLFFPYSPEHLAHS P+ KAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEM
Sbjct: 1469 DNLYCLFFPYSPEHLAHSAPKSKAMRPDISVTIYASSREGSQISGSASALFIGGFSVMEM 1528

Query: 203  GKSATQLILTPDSNKTVITILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMG 262
            GKSATQLILTPDSNKTVITILGNTDVEL+ HERDLVIVGPISKE+SG+ G +EYEVKAMG
Sbjct: 1529 GKSATQLILTPDSNKTVITILGNTDVELYCHERDLVIVGPISKEDSGVGGHSEYEVKAMG 1588

Query: 263  TKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF 322
            TKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Sbjct: 1589 TKRFKDKIIITLAANGQRTEIDVFYEPREKEVSVAAFGTTTIWATILGSLFLLILTIALF 1648

Query: 323  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTID 382
            ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTID
Sbjct: 1649 ICFLDKPNRAQPSQPSRPATTHTPTITAPVTPDRSSPVLSNEQSPRTPQPFVDYVRQTID 1708

Query: 383  ETPYYKREGRRRFNVQNTF 402
            ETPYYKREGRRRFNVQNTF
Sbjct: 1709 ETPYYKREGRRRFNVQNTF 1727

[Close]

BLAST of Spg001822 vs. NCBI nr
Match: XP_022982533.1 (nuclear pore complex protein GP210 isoform X1 [Cucurbita maxima])

HSP 1 Score: 663.3 bits (1710), Expect = 1.3e-186
Identity = 331/379 (87.34%), Postives = 347/379 (91.56%), Query Frame = 0


Query: 23   LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTV 82
            +  FN QLSGRW TTN SV+SVD  SG+AEAVGPGSTEVLFEGSNLNLRTT TVQ GYT+
Sbjct: 1582 IKGFNGQLSGRWTTTNGSVLSVDMLSGIAEAVGPGSTEVLFEGSNLNLRTTATVQTGYTL 1641

Query: 83   SVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDY 142
            SV+AP EILTNVPFPAKGYNFSVN SGK GTLLNDKRVLHDCRVDP FVGYAKPWLDLD 
Sbjct: 1642 SVVAPAEILTNVPFPAKGYNFSVNCSGKHGTLLNDKRVLHDCRVDPLFVGYAKPWLDLDN 1701

Query: 143  GNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEM 202
             NLYCLFFPYSPEHLAHS P+ KAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEM
Sbjct: 1702 DNLYCLFFPYSPEHLAHSAPKSKAMRPDISVTIYASSREGSQISGSASALFIGGFSVMEM 1761

Query: 203  GKSATQLILTPDSNKTVITILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMG 262
            GKSATQLILTPDSNKTVITILGNTDVEL+ HERDLVIVGPISKE+SG+ G +EYEVKAMG
Sbjct: 1762 GKSATQLILTPDSNKTVITILGNTDVELYCHERDLVIVGPISKEDSGVGGHSEYEVKAMG 1821

Query: 263  TKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF 322
            TKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Sbjct: 1822 TKRFKDKIIITLAANGQRTEIDVFYEPREKEVSVAAFGTTTIWATILGSLFLLILTIALF 1881

Query: 323  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTID 382
            ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTID
Sbjct: 1882 ICFLDKPNRAQPSQPSRPATTHTPTITAPVTPDRSSPVLSNEQSPRTPQPFVDYVRQTID 1941

Query: 383  ETPYYKREGRRRFNVQNTF 402
            ETPYYKREGRRRFNVQNTF
Sbjct: 1942 ETPYYKREGRRRFNVQNTF 1960

[Close]

BLAST of Spg001822 vs. NCBI nr
Match: KAG6581051.1 (Nuclear pore complex protein 210, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 659.8 bits (1701), Expect = 1.5e-185
Identity = 331/382 (86.65%), Postives = 348/382 (91.10%), Query Frame = 0


Query: 23   LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTV 82
            +  FN QLSGRW TTN SV+SVD  SG+AEAVGPGSTEVLFEGSNLNLRTT TVQ GYT+
Sbjct: 2210 IKGFNGQLSGRWTTTNGSVLSVDMLSGIAEAVGPGSTEVLFEGSNLNLRTTATVQTGYTL 2269

Query: 83   SVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDY 142
            SV+AP EILTNVPFPAKGYNFSVNFSGK GTLLNDKRVLHDCRVDP FVGYAKPWLDLD 
Sbjct: 2270 SVVAPAEILTNVPFPAKGYNFSVNFSGKHGTLLNDKRVLHDCRVDPLFVGYAKPWLDLDN 2329

Query: 143  GNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEM 202
             N YCLFFPYSPEHLAHS P+LKAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEM
Sbjct: 2330 DNSYCLFFPYSPEHLAHSAPKLKAMRPDISVTIYASSREGSQISGSASALFIGGFSVMEM 2389

Query: 203  GKSATQLILTPDSNKTVITILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMG 262
            GKSATQLILTPDSNKTVITILGNTDVEL+ HERDLVI+GPISKE+SG+ G +EYEVKAMG
Sbjct: 2390 GKSATQLILTPDSNKTVITILGNTDVELYCHERDLVIIGPISKEDSGVGGHSEYEVKAMG 2449

Query: 263  TKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF 322
            TKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Sbjct: 2450 TKRFKDKIIITLAANGQRTEIDVFYEPREKEVSVGAFGTTTIWATILGSLFLLILTIALF 2509

Query: 323  ICFMDKPNRA---QPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQ 382
            ICF+DKPNRA   QPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQ
Sbjct: 2510 ICFLDKPNRAQPSQPSQPSRPATTHTPTITAPVTPDRSSPVLSNEQSPRTPQPFVDYVRQ 2569

Query: 383  TIDETPYYKREGRRRFNVQNTF 402
            TIDETPYYKREGRRRFNVQNTF
Sbjct: 2570 TIDETPYYKREGRRRFNVQNTF 2591

[Close]

BLAST of Spg001822 vs. ExPASy Swiss-Prot
Match: F4KHD8 (Nuclear pore complex protein GP210 OS=Arabidopsis thaliana OX=3702 GN=GB210 PE=1 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.8e-85
Identity = 170/376 (45.21%), Postives = 249/376 (66.22%), Query Frame = 0


Query: 27   NDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIA 86
            +++++G+W T+N SV+SV+  SG A+A+  GST V F+G  L L+T VTV  G T+ V +
Sbjct: 1557 DNEVTGQWFTSNRSVISVNVASGQAKAISQGSTHVTFKGHGLKLQTKVTVLFGNTIYVDS 1616

Query: 87   PVEILTNVPFPAKGYNFSVNF-SGKDGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDYGNL 146
            P E LTNV  PA+GY F V F   K     +  +   +C+VDPPF+GY KPW+DLD GN 
Sbjct: 1617 PGETLTNVHVPAEGYKFPVKFRENKFAVTEHGNKATFNCQVDPPFIGYTKPWMDLDTGNT 1676

Query: 147  YCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKS 206
            YCLFFPYSPEHL HS+   K M+P +S ++ AS +EA ++SGSASAL IGGFSV    K 
Sbjct: 1677 YCLFFPYSPEHLVHSMSITKDMKPHVSFSVDASLKEARRVSGSASALLIGGFSVTGPDK- 1736

Query: 207  ATQLILTPDSNKTVITILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKR 266
               L + PDSN T+I+++GNTDV++H   +  + +  I +++ GIAG  +Y+V  + +++
Sbjct: 1737 ---LNINPDSNTTIISLVGNTDVQIHCRNKGRLSISLIKRDDFGIAGHAQYKVNVLRSEQ 1796

Query: 267  FKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLFICF 326
            F D+I+ITL A GQ  EIDV Y+  E     ++ D  ++   IL  + +L++++ + +  
Sbjct: 1797 FTDRIIITLPATGQIVEIDVCYDTGE-SLVASSKDGYSVLLKILWGVLVLVVSVIILMKV 1856

Query: 327  MDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRS-PVVSNEQSPRTPQPFVDYVRQTIDET 386
            +D+    Q    +    T++    A  TP+RRS  V+ +E+SPRTP PF++YV++T+DET
Sbjct: 1857 IDR----QVPTGATGTATYSGN-AAQGTPERRSGTVIYHEESPRTPSPFMEYVKRTVDET 1916

Query: 387  PYYKREGRRRFNVQNT 401
            PYY+REGRRRFN QNT
Sbjct: 1917 PYYRREGRRRFNPQNT 1922

[Close]

BLAST of Spg001822 vs. ExPASy TrEMBL
Match: A0A6J1F7E5 (nuclear pore complex protein GP210 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441535 PE=3 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 4.9e-187
Identity = 330/379 (87.07%), Postives = 348/379 (91.82%), Query Frame = 0


Query: 23   LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTV 82
            +  FN QLSGRW TTN SV+SVD  SG+A+AVGPGSTEVLFEGSNLNLRTT TVQ GYT+
Sbjct: 1582 IKGFNGQLSGRWTTTNGSVLSVDMLSGIAKAVGPGSTEVLFEGSNLNLRTTATVQTGYTL 1641

Query: 83   SVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDY 142
            SV+AP EILTNVPFPAKGYNFSVNFSGK GTLLNDKRVLHDCRVDP FVGYAKPWLDLD 
Sbjct: 1642 SVVAPAEILTNVPFPAKGYNFSVNFSGKHGTLLNDKRVLHDCRVDPLFVGYAKPWLDLDN 1701

Query: 143  GNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEM 202
             N YCLFFPYSPEHLAHS P+LKAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEM
Sbjct: 1702 DNSYCLFFPYSPEHLAHSAPKLKAMRPDISVTIYASSREGSQISGSASALFIGGFSVMEM 1761

Query: 203  GKSATQLILTPDSNKTVITILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMG 262
            GKSATQLILTPDSNKTVITILGNTDVEL+ HERDLVI+GPISKE+SG+ G +EYEVKAMG
Sbjct: 1762 GKSATQLILTPDSNKTVITILGNTDVELYCHERDLVIIGPISKEDSGVGGHSEYEVKAMG 1821

Query: 263  TKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF 322
            TKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Sbjct: 1822 TKRFKDKIIITLAANGQRTEIDVFYEPREKEVSVGAFGTTTIWATILGSLFLLILTIALF 1881

Query: 323  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTID 382
            ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTID
Sbjct: 1882 ICFLDKPNRAQPSQPSRPATTHTPTITAPVTPDRSSPVLSNEQSPRTPQPFVDYVRQTID 1941

Query: 383  ETPYYKREGRRRFNVQNTF 402
            ETPYYKREGRRRFNVQNTF
Sbjct: 1942 ETPYYKREGRRRFNVQNTF 1960

[Close]

BLAST of Spg001822 vs. ExPASy TrEMBL
Match: A0A6J1F1J2 (nuclear pore complex protein GP210 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441535 PE=3 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 4.9e-187
Identity = 330/379 (87.07%), Postives = 348/379 (91.82%), Query Frame = 0


Query: 23   LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTV 82
            +  FN QLSGRW TTN SV+SVD  SG+A+AVGPGSTEVLFEGSNLNLRTT TVQ GYT+
Sbjct: 1349 IKGFNGQLSGRWTTTNGSVLSVDMLSGIAKAVGPGSTEVLFEGSNLNLRTTATVQTGYTL 1408

Query: 83   SVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDY 142
            SV+AP EILTNVPFPAKGYNFSVNFSGK GTLLNDKRVLHDCRVDP FVGYAKPWLDLD 
Sbjct: 1409 SVVAPAEILTNVPFPAKGYNFSVNFSGKHGTLLNDKRVLHDCRVDPLFVGYAKPWLDLDN 1468

Query: 143  GNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEM 202
             N YCLFFPYSPEHLAHS P+LKAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEM
Sbjct: 1469 DNSYCLFFPYSPEHLAHSAPKLKAMRPDISVTIYASSREGSQISGSASALFIGGFSVMEM 1528

Query: 203  GKSATQLILTPDSNKTVITILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMG 262
            GKSATQLILTPDSNKTVITILGNTDVEL+ HERDLVI+GPISKE+SG+ G +EYEVKAMG
Sbjct: 1529 GKSATQLILTPDSNKTVITILGNTDVELYCHERDLVIIGPISKEDSGVGGHSEYEVKAMG 1588

Query: 263  TKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF 322
            TKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Sbjct: 1589 TKRFKDKIIITLAANGQRTEIDVFYEPREKEVSVGAFGTTTIWATILGSLFLLILTIALF 1648

Query: 323  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTID 382
            ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTID
Sbjct: 1649 ICFLDKPNRAQPSQPSRPATTHTPTITAPVTPDRSSPVLSNEQSPRTPQPFVDYVRQTID 1708

Query: 383  ETPYYKREGRRRFNVQNTF 402
            ETPYYKREGRRRFNVQNTF
Sbjct: 1709 ETPYYKREGRRRFNVQNTF 1727

[Close]

BLAST of Spg001822 vs. ExPASy TrEMBL
Match: A0A6J1J529 (nuclear pore complex protein GP210 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481382 PE=3 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 6.4e-187
Identity = 331/379 (87.34%), Postives = 347/379 (91.56%), Query Frame = 0


Query: 23   LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTV 82
            +  FN QLSGRW TTN SV+SVD  SG+AEAVGPGSTEVLFEGSNLNLRTT TVQ GYT+
Sbjct: 1582 IKGFNGQLSGRWTTTNGSVLSVDMLSGIAEAVGPGSTEVLFEGSNLNLRTTATVQTGYTL 1641

Query: 83   SVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDY 142
            SV+AP EILTNVPFPAKGYNFSVN SGK GTLLNDKRVLHDCRVDP FVGYAKPWLDLD 
Sbjct: 1642 SVVAPAEILTNVPFPAKGYNFSVNCSGKHGTLLNDKRVLHDCRVDPLFVGYAKPWLDLDN 1701

Query: 143  GNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEM 202
             NLYCLFFPYSPEHLAHS P+ KAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEM
Sbjct: 1702 DNLYCLFFPYSPEHLAHSAPKSKAMRPDISVTIYASSREGSQISGSASALFIGGFSVMEM 1761

Query: 203  GKSATQLILTPDSNKTVITILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMG 262
            GKSATQLILTPDSNKTVITILGNTDVEL+ HERDLVIVGPISKE+SG+ G +EYEVKAMG
Sbjct: 1762 GKSATQLILTPDSNKTVITILGNTDVELYCHERDLVIVGPISKEDSGVGGHSEYEVKAMG 1821

Query: 263  TKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF 322
            TKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Sbjct: 1822 TKRFKDKIIITLAANGQRTEIDVFYEPREKEVSVAAFGTTTIWATILGSLFLLILTIALF 1881

Query: 323  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTID 382
            ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTID
Sbjct: 1882 ICFLDKPNRAQPSQPSRPATTHTPTITAPVTPDRSSPVLSNEQSPRTPQPFVDYVRQTID 1941

Query: 383  ETPYYKREGRRRFNVQNTF 402
            ETPYYKREGRRRFNVQNTF
Sbjct: 1942 ETPYYKREGRRRFNVQNTF 1960

[Close]

BLAST of Spg001822 vs. ExPASy TrEMBL
Match: A0A6J1J4U8 (nuclear pore complex protein GP210 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481382 PE=3 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 6.4e-187
Identity = 331/379 (87.34%), Postives = 347/379 (91.56%), Query Frame = 0


Query: 23   LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTV 82
            +  FN QLSGRW TTN SV+SVD  SG+AEAVGPGSTEVLFEGSNLNLRTT TVQ GYT+
Sbjct: 1349 IKGFNGQLSGRWTTTNGSVLSVDMLSGIAEAVGPGSTEVLFEGSNLNLRTTATVQTGYTL 1408

Query: 83   SVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDY 142
            SV+AP EILTNVPFPAKGYNFSVN SGK GTLLNDKRVLHDCRVDP FVGYAKPWLDLD 
Sbjct: 1409 SVVAPAEILTNVPFPAKGYNFSVNCSGKHGTLLNDKRVLHDCRVDPLFVGYAKPWLDLDN 1468

Query: 143  GNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEM 202
             NLYCLFFPYSPEHLAHS P+ KAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEM
Sbjct: 1469 DNLYCLFFPYSPEHLAHSAPKSKAMRPDISVTIYASSREGSQISGSASALFIGGFSVMEM 1528

Query: 203  GKSATQLILTPDSNKTVITILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMG 262
            GKSATQLILTPDSNKTVITILGNTDVEL+ HERDLVIVGPISKE+SG+ G +EYEVKAMG
Sbjct: 1529 GKSATQLILTPDSNKTVITILGNTDVELYCHERDLVIVGPISKEDSGVGGHSEYEVKAMG 1588

Query: 263  TKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF 322
            TKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Sbjct: 1589 TKRFKDKIIITLAANGQRTEIDVFYEPREKEVSVAAFGTTTIWATILGSLFLLILTIALF 1648

Query: 323  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTID 382
            ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTID
Sbjct: 1649 ICFLDKPNRAQPSQPSRPATTHTPTITAPVTPDRSSPVLSNEQSPRTPQPFVDYVRQTID 1708

Query: 383  ETPYYKREGRRRFNVQNTF 402
            ETPYYKREGRRRFNVQNTF
Sbjct: 1709 ETPYYKREGRRRFNVQNTF 1727

[Close]

BLAST of Spg001822 vs. ExPASy TrEMBL
Match: A0A1S4E5N1 (nuclear pore complex protein GP210 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502678 PE=3 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 8.7e-184
Identity = 326/380 (85.79%), Postives = 346/380 (91.05%), Query Frame = 0


Query: 23   LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTV 82
            +  F  Q SGRWI+TNESV+SVD  SG+AEAVGPGSTEVLFEGSNLNLRTTVTVQ G+T+
Sbjct: 1424 IKGFKAQFSGRWISTNESVLSVDMLSGIAEAVGPGSTEVLFEGSNLNLRTTVTVQTGHTL 1483

Query: 83   SVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDY 142
            SV+APVEILTNVPFPAKGYNFSVNF G+ G LLNDKRVLHDCRVDPPFVGYAKPWLD DY
Sbjct: 1484 SVVAPVEILTNVPFPAKGYNFSVNFRGQSGALLNDKRVLHDCRVDPPFVGYAKPWLDHDY 1543

Query: 143  GNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEM 202
             N YCLFFPYSPEHLA S  + KAMRPDISVTIYASSRE++QI GSASALF+GGFSVMEM
Sbjct: 1544 DNSYCLFFPYSPEHLARSATKSKAMRPDISVTIYASSRESSQIFGSASALFVGGFSVMEM 1603

Query: 203  GKSATQLILTPDSNKTVITILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMG 262
             KSATQLILTPDSNKT ITILGNTDVELHWHERDLVIVGPISKEESG+ GR EYEVKAMG
Sbjct: 1604 DKSATQLILTPDSNKTAITILGNTDVELHWHERDLVIVGPISKEESGVGGRAEYEVKAMG 1663

Query: 263  TKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF 322
            TKRF+DKILITLAANGQRTEIDV Y+P E+EA ET FD TTIWAT+LGSLSLLILTITLF
Sbjct: 1664 TKRFRDKILITLAANGQRTEIDVIYDPGEKEALETVFDTTTIWATVLGSLSLLILTITLF 1723

Query: 323  ICFMDKPNRAQPSQPS-RPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTI 382
            IC++DKPNRAQPSQPS   A THTPTVTAP TPDR SPV+SNEQSPRTPQPFVDYVRQTI
Sbjct: 1724 ICYLDKPNRAQPSQPSWSLATTHTPTVTAPRTPDRSSPVISNEQSPRTPQPFVDYVRQTI 1783

Query: 383  DETPYYKREGRRRFNVQNTF 402
            DETPYYKREGRRRFNVQNTF
Sbjct: 1784 DETPYYKREGRRRFNVQNTF 1803

[Close]

BLAST of Spg001822 vs. TAIR 10
Match: AT5G40480.1 (embryo defective 3012 )

HSP 1 Score: 317.8 bits (813), Expect = 1.3e-86
Identity = 170/376 (45.21%), Postives = 249/376 (66.22%), Query Frame = 0


Query: 27   NDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIA 86
            +++++G+W T+N SV+SV+  SG A+A+  GST V F+G  L L+T VTV  G T+ V +
Sbjct: 1557 DNEVTGQWFTSNRSVISVNVASGQAKAISQGSTHVTFKGHGLKLQTKVTVLFGNTIYVDS 1616

Query: 87   PVEILTNVPFPAKGYNFSVNF-SGKDGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDYGNL 146
            P E LTNV  PA+GY F V F   K     +  +   +C+VDPPF+GY KPW+DLD GN 
Sbjct: 1617 PGETLTNVHVPAEGYKFPVKFRENKFAVTEHGNKATFNCQVDPPFIGYTKPWMDLDTGNT 1676

Query: 147  YCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKS 206
            YCLFFPYSPEHL HS+   K M+P +S ++ AS +EA ++SGSASAL IGGFSV    K 
Sbjct: 1677 YCLFFPYSPEHLVHSMSITKDMKPHVSFSVDASLKEARRVSGSASALLIGGFSVTGPDK- 1736

Query: 207  ATQLILTPDSNKTVITILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKR 266
               L + PDSN T+I+++GNTDV++H   +  + +  I +++ GIAG  +Y+V  + +++
Sbjct: 1737 ---LNINPDSNTTIISLVGNTDVQIHCRNKGRLSISLIKRDDFGIAGHAQYKVNVLRSEQ 1796

Query: 267  FKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLFICF 326
            F D+I+ITL A GQ  EIDV Y+  E     ++ D  ++   IL  + +L++++ + +  
Sbjct: 1797 FTDRIIITLPATGQIVEIDVCYDTGE-SLVASSKDGYSVLLKILWGVLVLVVSVIILMKV 1856

Query: 327  MDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRS-PVVSNEQSPRTPQPFVDYVRQTIDET 386
            +D+    Q    +    T++    A  TP+RRS  V+ +E+SPRTP PF++YV++T+DET
Sbjct: 1857 IDR----QVPTGATGTATYSGN-AAQGTPERRSGTVIYHEESPRTPSPFMEYVKRTVDET 1916

Query: 387  PYYKREGRRRFNVQNT 401
            PYY+REGRRRFN QNT
Sbjct: 1917 PYYRREGRRRFNPQNT 1922

The following BLAST results are available for this feature:

BLAST of Spg001822 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934340.1	1.0e-186	87.07	nuclear pore complex protein GP210 isoform X1 [Cucurbita moschata]	[more]
XP_022934341.1	1.0e-186	87.07	nuclear pore complex protein GP210 isoform X2 [Cucurbita moschata]	[more]
XP_022982534.1	1.3e-186	87.34	nuclear pore complex protein GP210 isoform X2 [Cucurbita maxima]	[more]
XP_022982533.1	1.3e-186	87.34	nuclear pore complex protein GP210 isoform X1 [Cucurbita maxima]	[more]
KAG6581051.1	1.5e-185	86.65	Nuclear pore complex protein 210, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of Spg001822 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4KHD8	1.8e-85	45.21	Nuclear pore complex protein GP210 OS=Arabidopsis thaliana OX=3702 GN=GB210 PE=1...	[more]

BLAST of Spg001822 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7E5	4.9e-187	87.07	nuclear pore complex protein GP210 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1F1J2	4.9e-187	87.07	nuclear pore complex protein GP210 isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1J529	6.4e-187	87.34	nuclear pore complex protein GP210 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1J4U8	6.4e-187	87.34	nuclear pore complex protein GP210 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A1S4E5N1	8.7e-184	85.79	nuclear pore complex protein GP210 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]

BLAST of Spg001822 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40480.1	1.3e-86	45.21	embryo defective 3012	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..371
None	No IPR available	PANTHER	PTHR23019:SF0	NUCLEAR PORE MEMBRANE GLYCOPROTEIN 210	coord: 26..359
None	No IPR available	PANTHER	PTHR23019	NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED	coord: 26..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg001822.1	Spg001822.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003723	RNA binding