Spg001782 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGACTCTCAGCGCCAACTATTCAACCTGATTAACTCATTCATGAACAACCACCCTAGGATAGAAAACCAAACTCCATACCTCAGACACCAGATAAGGCAATTAGCCTGCTTCCGGTTGATTCATGAAAGTGACCTATGCTGTCGAGAAAGCACCAGGATGGATAGAAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACGTCCGGGTTGGTGGGAATGGAAATCGTAGACGTGGAAGAGATGGTCGCAATGTTCTTGCACATCGTTGCTCATGATGTTAAGAATCGAGTCATTAGAAGACAGTTTGCACGGTCGGGCGAAACCGTTTCTCGACACTTCAACGCGACTTTGAGTGCCGTACTACGATTGTACGACGTTTACTTAAGAAACCTGAACCGATCACGACTTCTTGCCAAGATGGGAGGTGGAAATGGTTTGAGGTATGGACACTATACGTTTGCACACATCGTTAAGATTTTACAACGTCCTTCTGACATTTGTAATGCGATGTGGAAACAGAATTGTTTAGGTGCATTGGACGGTACGTACGTAAAGGTCCATGTTAGTGCAGTTGATCGACCAAGGTATAGGACGCGAAAGGGTGAGATTGCAACAAATGTATTGGGCGTCGTGTCCCCAAAAGGTGAATTCATTTTTGTTATGCCGGGATGGGAAGGTTCGGCTGCTGATTCTCGTGTACTCAGAGATGCTATATCACGCCCCAATGGACTAATAGTGCCGAAGGGTATGGAACGAAATATGAATGTAAAATAGGATCGATTACGTCATCCTTTGGTATCAAACATCTTTTATGAACAGGTTACTACTACCTCTGTGATGCCGGGTACCCAAACGCAGAGGGTTTCTTGGCACCTTATAGAGGAGAGCGGTACCACTTAACCGAGTGGCGTGGGGGAGGCAATCCACCTACTACACCAAGAGAGTTCTTCAACATGAAGCATTCTTCTGCAAGGAATGTTATCGAGAGAGCATTCGGTGCTCTAAAAGGACGGTGGGCGATACTTCGGGGGAAGTCCTACTACCCTGCTCGGACCCAGTGTCGAATCATAACAGCGTGCTGTTTACTCCACAACCTTATCACCCGGGAGATGGGTCTGGATGTTGGATTGGATGAAGGTGATGTTGGTCGATCTGAACCTGTACCTCTAGATGGTGAGAACATAACCTTCATTCAAAGCTCCACTGAATGGACGCAAAAGCGAGATGACCTAGCGAACAGGATGTTCAACACGTGGGGGCAACATAATCCCTGATCCAGTTTCGAAATACGACTATCTGCTATGTTGTAATTTATATAGTTTTGACATTTCTTCGGCCTTACATTTTTTCTACAATCTAAACGATGTATTCCATGTAACTCAGTTTAGATTTATGGAAAACAATCGTTCATGTCGTTATTCTACATTATGTTTCTAACTTCTTGTCTGCGATTACTTCATAACTAAGTATCCTACATTATGTCACCGATTGTGTGAATTGATCAGAATACATACTTACAAAATCTGATGACACAATACTTTATCCATGTAGACTAATGGCAGGTGGAGATAAACAACAGAAGCACATCTGGACGAGGCAGGAGGAGGCACGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGGCCGGATACCTAGCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAACGTCCGTAATAGACTGCAAGGTGAGGTCCTTGAAACGGCAATACAGTGCCATCTCGGAGATGCTGGGTCCGGGCTGCAGCGGATTTGGTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAGGGAGGTATATGATGCATGGGTGAAGGTACGAACATTAGTTATTCATTGATGTAACTCATGTACAATATCGTTGATAAAACACTCTTCAATACATGCAGTCACACTCGGCCGCGAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGGATCTTGCTTTCGTTTTCGGCAAAGACAGGGCGAGTGGCGGCGCGTGTAATGTTCCAGCGGAACAGACAGACAGCACCCACGGGGACGACGAGGGTGATCAGAATGTCCAGGCGGAACAGGATTGTTACGTCCCCGCCCTTCCAGACATTAATCTGGCCGCGGACATGGACTTCGATGACGTCCCCATCACACTGACAAGCCGACCAAGCACTGCAGGGTCCTCCCAGAGTCGAAAGCGGAGCAGAGCTTCATATGAAGCTGAAGCCCTTGATATTATGAGGCAGTCAGTGACTATGCAGAAGGCACAGTTCACTAAGATCGCTGACTGGCCGGAAGCCCAAGACGCGCGAGAGTTCAAGAGGCGGGACACGGTCGGAGAGATGCTCCTGGCGCAGCACGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTCTTCGCCAAACCGAAGATGACAAATATGATGTTGTCTGTGCCACCGAACCTCAGGCTTCGCTTTCTACGAGGACTACTGCACGAACGCCGGTGACTTCCTACCAGACTTTCCTCCACCATACTTTTGATTTGTAATTACGAAAATATGTACCTTCGACTGACATTTCACTATTTTTTGTTAACTGTAATATAGTCAACCCATCGTCAATTTTTTGTATAGGGTTGATCATTATGTTCCTAATGTTTATGGAATCAATCAACTTACAAATGTCAATGAAATCAGTCCACGAAGTTTCTGCAGTATCACTTATCCCATGTACATTTTTTTACTTTAAAATGTTTTGCAATTCATTCTTCTCGTCTAATGTCACCAATAACACACGAATGTGTGTAAGTCTAACTTAAACAAATTAGAATAGTAATAATTGTTATTAATTTTCGAACATTTTTAAACCATCTTAACCATACATGGTTATGCATTTCAGGACGTGACTAACATTAATCTTTTTTGTTATAACGATCATACTTTAGCGATCTACGACCGAATGACATCAATGGTGACAAATGAAGTGGATGAGGATATGTCTGACACGAGCAGTAAAATCGAGCCAGAACATGCACCATCAGCACGGAGTAGTAGGAGACGATGTTCCTACAAGAGGGAGATAACTGGGGTCATAAAGGATGCAATGGACAGTCAAATTACCAGTCTTCATAGAATCTCATCGTGGCCGGATCGAAAGAACGAACGGGACACTGCACGCCGTAAGTTGGTAGTCGAGGACATAGAAGAAATGGCATACTTCGATGAACGAGATAAGACTCAACTTCTCAAAGTGCTGCTCGCTGATATGCATCAAATCGAGACTTTCCTATCAATGCCCATGTCTTTGAGAAAAATTCATTGCATGCATCTTCTTGGAAGGAATGAATGA ATGGCTGACTCTCAGCGCCAACTATTCAACCTGATTAACTCATTCATGAACAACCACCCTAGGATAGAAAACCAAACTCCATACCTCAGACACCAGATAAGGCAATTAGCCTGCTTCCGGTTGATTCATGAAAGTGACCTATGCTGTCGAGAAAGCACCAGGATGGATAGAAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACGTCCGGGTTGGTGGGAATGGAAATCGTAGACGTGGAAGAGATGGTCGCAATGTTCTTGCACATCGTTGCTCATGATGTTAAGAATCGAGTCATTAGAAGACAGTTTGCACGGTCGGGCGAAACCGTTTCTCGACACTTCAACGCGACTTTGAGTGCCGTACTACGATTGTACGACGTTTACTTAAGAAACCTGAACCGATCACGACTTCTTGCCAAGATGGGAGGTGGAAATGGTTTGAGACTAATGGCAGGTGGAGATAAACAACAGAAGCACATCTGGACGAGGCAGGAGGAGGCACGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGGCCGGATACCTAGCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAACGTCCGTAATAGACTGCAAGGTGAGGTCCTTGAAACGGCAATACAGTGCCATCTCGGAGATGCTGGGTCCGGGCTGCAGCGGATTTGGTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAGGGAGGTATATGATGCATGGGTGAAGTCACACTCGGCCGCGAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGGATCTTGCTTTCGTTTTCGGCAAAGACAGGGCGAGTGGCGGCGCGTGTAATGTTCCAGCGGAACAGACAGACAGCACCCACGGGGACGACGAGGGTGATCAGAATGTCCAGGCGGAACAGGATTGTTACGTCCCCGCCCTTCCAGACATTAATCTGGCCGCGGACATGGACTTCGATGACGTCCCCATCACACTGACAAGCCGACCAAGCACTGCAGGGTCCTCCCAGAGTCGAAAGCGGAGCAGAGCTTCATATGAAGCTGAAGCCCTTGATATTATGAGGCAGTCAGTGACTATGCAGAAGGCACAGTTCACTAAGATCGCTGACTGGCCGGAAGCCCAAGACGCGCGAGAGTTCAAGAGGCGGGACACGGTCGGAGAGATGCTCCTGGCGCAGCACGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTCTTCGCCAAACCGAAGATGACAAATATGATGTTGTCTGTGCCACCGAACCTCAGGCTTCGCTTTCTACGAGGACTACTGCACGAACGCCGGGTTGATCATTATGTTCCTAATGTTTATGGAATCAATCAACTTACAAATGACGTGACTAACATTAATCTTTTTTGTTATAACGATCATACTTTAGCGATCTACGACCGAATGACATCAATGGTGACAAATGAAGTGGATGAGGATATGTCTGACACGAGCAGTAAAATCGAGCCAGAACATGCACCATCAGCACGGAGTAGTAGGAGACGATGTTCCTACAAGAGGGAGATAACTGGGGTCATAAAGGATGCAATGGACAGTCAAATTACCAGTCTTCATAGAATCTCATCGTGGCCGGATCGAAAGAACGAACGGGACACTGCACGCCGTAAGTTGGTAGTCGAGGACATAGAAGAAATGGCATACTTCGATGAACGAGATAAGACTCAACTTCTCAAAGTGCTGCTCGCTGATATGCATCAAATCGAGACTTTCCTATCAATGCCCATGTCTTTGAGAAAAATTCATTGCATGCATCTTCTTGGAAGGAATGAATGA ATGGCTGACTCTCAGCGCCAACTATTCAACCTGATTAACTCATTCATGAACAACCACCCTAGGATAGAAAACCAAACTCCATACCTCAGACACCAGATAAGGCAATTAGCCTGCTTCCGGTTGATTCATGAAAGTGACCTATGCTGTCGAGAAAGCACCAGGATGGATAGAAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACGTCCGGGTTGGTGGGAATGGAAATCGTAGACGTGGAAGAGATGGTCGCAATGTTCTTGCACATCGTTGCTCATGATGTTAAGAATCGAGTCATTAGAAGACAGTTTGCACGGTCGGGCGAAACCGTTTCTCGACACTTCAACGCGACTTTGAGTGCCGTACTACGATTGTACGACGTTTACTTAAGAAACCTGAACCGATCACGACTTCTTGCCAAGATGGGAGGTGGAAATGGTTTGAGACTAATGGCAGGTGGAGATAAACAACAGAAGCACATCTGGACGAGGCAGGAGGAGGCACGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGGCCGGATACCTAGCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAACGTCCGTAATAGACTGCAAGGTGAGGTCCTTGAAACGGCAATACAGTGCCATCTCGGAGATGCTGGGTCCGGGCTGCAGCGGATTTGGTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAGGGAGGTATATGATGCATGGGTGAAGTCACACTCGGCCGCGAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGGATCTTGCTTTCGTTTTCGGCAAAGACAGGGCGAGTGGCGGCGCGTGTAATGTTCCAGCGGAACAGACAGACAGCACCCACGGGGACGACGAGGGTGATCAGAATGTCCAGGCGGAACAGGATTGTTACGTCCCCGCCCTTCCAGACATTAATCTGGCCGCGGACATGGACTTCGATGACGTCCCCATCACACTGACAAGCCGACCAAGCACTGCAGGGTCCTCCCAGAGTCGAAAGCGGAGCAGAGCTTCATATGAAGCTGAAGCCCTTGATATTATGAGGCAGTCAGTGACTATGCAGAAGGCACAGTTCACTAAGATCGCTGACTGGCCGGAAGCCCAAGACGCGCGAGAGTTCAAGAGGCGGGACACGGTCGGAGAGATGCTCCTGGCGCAGCACGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTCTTCGCCAAACCGAAGATGACAAATATGATGTTGTCTGTGCCACCGAACCTCAGGCTTCGCTTTCTACGAGGACTACTGCACGAACGCCGGGTTGATCATTATGTTCCTAATGTTTATGGAATCAATCAACTTACAAATGACGTGACTAACATTAATCTTTTTTGTTATAACGATCATACTTTAGCGATCTACGACCGAATGACATCAATGGTGACAAATGAAGTGGATGAGGATATGTCTGACACGAGCAGTAAAATCGAGCCAGAACATGCACCATCAGCACGGAGTAGTAGGAGACGATGTTCCTACAAGAGGGAGATAACTGGGGTCATAAAGGATGCAATGGACAGTCAAATTACCAGTCTTCATAGAATCTCATCGTGGCCGGATCGAAAGAACGAACGGGACACTGCACGCCGTAAGTTGGTAGTCGAGGACATAGAAGAAATGGCATACTTCGATGAACGAGATAAGACTCAACTTCTCAAAGTGCTGCTCGCTGATATGCATCAAATCGAGACTTTCCTATCAATGCCCATGTCTTTGAGAAAAATTCATTGCATGCATCTTCTTGGAAGGAATGAATGA MADSQRQLFNLINSFMNNHPRIENQTPYLRHQIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVYLRNLNRSRLLAKMGGGNGLRLMAGGDKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQTDSTHGDDEGDQNVQAEQDCYVPALPDINLAADMDFDDVPITLTSRPSTAGSSQSRKRSRASYEAEALDIMRQSVTMQKAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNLRLRFLRGLLHERRVDHYVPNVYGINQLTNDVTNINLFCYNDHTLAIYDRMTSMVTNEVDEDMSDTSSKIEPEHAPSARSSRRRCSYKREITGVIKDAMDSQITSLHRISSWPDRKNERDTARRKLVVEDIEEMAYFDERDKTQLLKVLLADMHQIETFLSMPMSLRKIHCMHLLGRNE Homology
BLAST of Spg001782 vs. NCBI nr
Match: KAA0034843.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 300.1 bits (767), Expect = 4.6e-77 Identity = 220/645 (34.11%), Postives = 285/645 (44.19%), Query Frame = 0
BLAST of Spg001782 vs. NCBI nr
Match: TYK26842.1 (uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]) HSP 1 Score: 265.4 bits (677), Expect = 1.2e-66 Identity = 142/315 (45.08%), Postives = 197/315 (62.54%), Query Frame = 0
BLAST of Spg001782 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]) HSP 1 Score: 264.6 bits (675), Expect = 2.1e-66 Identity = 167/432 (38.66%), Postives = 223/432 (51.62%), Query Frame = 0
BLAST of Spg001782 vs. NCBI nr
Match: KAA0033487.1 (uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]) HSP 1 Score: 263.1 bits (671), Expect = 6.2e-66 Identity = 141/315 (44.76%), Postives = 196/315 (62.22%), Query Frame = 0
BLAST of Spg001782 vs. NCBI nr
Match: KAA0045638.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 259.6 bits (662), Expect = 6.8e-65 Identity = 181/493 (36.71%), Postives = 251/493 (50.91%), Query Frame = 0
BLAST of Spg001782 vs. ExPASy TrEMBL
Match: A0A5A7SWD8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00010 PE=3 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 2.2e-77 Identity = 220/645 (34.11%), Postives = 285/645 (44.19%), Query Frame = 0
BLAST of Spg001782 vs. ExPASy TrEMBL
Match: A0A5D3DTL0 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00340 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 6.0e-67 Identity = 142/315 (45.08%), Postives = 197/315 (62.54%), Query Frame = 0
BLAST of Spg001782 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 1.0e-66 Identity = 167/432 (38.66%), Postives = 223/432 (51.62%), Query Frame = 0
BLAST of Spg001782 vs. ExPASy TrEMBL
Match: A0A5A7SW62 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00210 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 3.0e-66 Identity = 141/315 (44.76%), Postives = 196/315 (62.22%), Query Frame = 0
BLAST of Spg001782 vs. ExPASy TrEMBL
Match: A0A5A7TS15 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001490 PE=3 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 3.3e-65 Identity = 181/493 (36.71%), Postives = 251/493 (50.91%), Query Frame = 0
BLAST of Spg001782 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 1.4e-10 Identity = 36/102 (35.29%), Postives = 60/102 (58.82%), Query Frame = 0
BLAST of Spg001782 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 58.5 bits (140), Expect = 2.2e-08 Identity = 26/89 (29.21%), Postives = 49/89 (55.06%), Query Frame = 0
BLAST of Spg001782 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). ) HSP 1 Score: 58.5 bits (140), Expect = 2.2e-08 Identity = 26/89 (29.21%), Postives = 49/89 (55.06%), Query Frame = 0
BLAST of Spg001782 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 7.7e-06 Identity = 52/219 (23.74%), Postives = 95/219 (43.38%), Query Frame = 0
BLAST of Spg001782 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 1.0e-05 Identity = 30/91 (32.97%), Postives = 47/91 (51.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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