Spg001696 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg001696
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Peptide deformylase
Location	scaffold10: 2977719 .. 2983728 (-)
RNA-Seq Expression	Spg001696
Synteny	Spg001696

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTCGCCAAAGATGGAAGGTCGGAGAAATGCTCCCTCCTTTTGTCAGCTCCTCCTTCCTCCTTGGGAATTGCCTCTACTCCCCCTTCTCTCAAATTTTTGTCTCTACCAGGGATATCTCATTCTCTAAAAGGGGCTACCTTACTATTGTTCTCATCCTTATGATTTCATGGTTGATTGGACTTTACTCAGGTACAATGAACACTTCTAATTGGATTAGAAGAGTTGATCATTTTGAGTTGATTTCTTACGCATCTTGAAGTAGATGAACTTTGCTCTCCAAATTGCTTTTGAAAACTTCAATTTTCAAGTGTCAAATATGAACTCCAAACATTAAGGCCCCGTTTGATAACCATTTGGTTTTTTGTTTTTGGTTTTTGAAAATTAGACTTGTTTTCTACCAATTTCCCTACCATGGTTTTCATATTTGCCAATGACACATTTGAATTCCTAACCAAATTCTAAAAACAAAAACAAGTTTTTGAAAACTACTTTTTTTAGTTTTCAAAATTTGCTTGGTTTTCAAAAACAAGGAAAGAAAGCTATTAGCAAAACAAAGAAATTTGTAGGTGGAGGTAGGATTTATAAGCTTAATTTTCAAAAACCAAAAACAAAAAACCAAATGGTTATCAAACAAGGCCTAAAATATTGTTCCATCAACTAATCTGCTATATGAAAGCTTCTACAATTCTACATCACATAATATATCTAAATTAGTGCTTTCAGCATCCAAACATTCTTTAATCCACAAATTACTCTTTCAAAGATGCCAACAAGAGTATAGCTCAACTGACCCAAAATTTATACTAATGACCAAGAAGTCTATGGTTCGAACTCCTCATGTTGTCAAAAAAAAAAAAAAAAAAAAAACCTCTTTGAAAGATGCTATAAAAGTAAAAAAAATGAAATGTGAGGAAATTACACACAAAGATTCTAACAATGTACCCACAAATTAAAGGGACTTGCATGTACTCGGGTGATAACCTAAAATCAAGAAAAGTGAACCAATGTGCACTCCTAAAGTAGTAGATGGGGTTCTCTTTTGAACAACATATCATCTTTTTATTAACAAAAACAATTTTTTGAATGAAATGAGTGAATTGAATTTTTTTTGTTAAATTATTAAAAATATCCCTGAATTATGATGATGTTGGTTTTAATTATTCCTCTGAACTTCCAAACGTTTCATTTTAGTCCTCAAAGTTTGAATTTTGTTACAAAACAACCATTGAAGGCAGTTTTTCGTTAGATTTATGGACGAAAAATGACGTGTTTGCATATATATTGTTGCTTATGTGAACATATTTGAACATATACGTGGAAAAAACAATAAAAACACATGCAAACACATCATTTTCAGTGCATAAATTTAACGGAAAATGTGTTCGTGGGTCTTTTTGAAATTGAAACAAACTTCAAAGTTCGAGGGCTAAAATGAAACTTTGGAAAGTCTAGGGGTATAATTGAATTCAACCTCATAGTTCAGAGCTATTTTTGATAATTTAAACTTTTGAAAGTTCAGGACTAAAATGAAACTTTTAAAAGTTCAGGGGTATTTTTGATAATTAACCAAAATTTTTATTCGATTGAGAGTAAAATTAAGAAATTTAAAATATCAAACACCAAAGATTTTTTTTTTTTTAAGATCAACAATTAGGGGTGGGAGGATTCGAACCTCTGACTTCTTGGTCAAAAATACATATCAATTACGACTAATGCTCGCCTTTGGCACAAACACCAAAGATTATATATTCAACCTAAGTAAAATATGGAAAATGAAAATACAACTTAGCAAAAGTGTTGCTAAGTGTTGGTCCATGATTCAAATTTGCATTGCATCTGCTCCTTCTATTATTTTTCTTTTCCATTTTTGTCTCATTATTTTCTAGATTTTGCAATTCAACCCCTAGATACTTTCTCATTGTTTCTCTAATTTTCATCAAAATTACATTATTGCACAACCTTTAGCCACAGCCTTCTCCTTCGCAATAGCTTTTGTGAGATCGTTATTCAACAGGCGTCCCGCCCTTGTCTCAGCTCTGCTCCTCCGCCGGTCCACCGTCGGCGCCCATTCCGGCCAATTTCCGGCGGCCATGGCCTACACTGCTCGATTGCACCTTTCTTTACCACACGCTCTTCTTCCTACTTTATCCCGCCGGTCGGCTCTTCCCGCCGTTTTCCGCCGGCTAAGCCGTGTTTCCTCAACCGGCCAGTTCTTCTCCCATTCGAGTAAGTCCAGCCCTTCAACGACTCTGGTTTACGCGCAGGCCAAGCGAGGATTCTCCGCCAGAGAAGATGTAGCTTCTTGTAAGCTTAAACCGTTTTGCAATTTGTTCTCCTATCTCTTTTATATTGCCATTTCTTCAATTCTCCATATAGGTTTGTGTAATTTTTCTAATAAGATTGTTGTTTTTTAGCTGCCGATCTTGAATTTGAGGCGCCGCTCAAAATTGTGGAATATCCGGACCCAATACTTAGAGCAAAGAATAAGCGTATTGATTCATTTGATGATAATCTGAAGAAGTTAGTGCAGGAAATGTTCGATGTAATGTATAAGTAAGTTTCTCGATTGGTTATTTGTTCCCTTTGTTTTCCTTCTTTCATGGTCAATTGTCTGCTTCATTTCATCTGGTAATTGGGTATTTGTATTTATATCATTTCATGAAAGAAGGATAAAACTCTCCAGTTTGCATATTTTATCTTTTTAATATTTTGTTTATACATTACCTCACTTGTGAGCTCGGAAATTAGCACAGTTGCAACTAGTAGACTATGAATATTAATTAGGGAGCAAATAATAGGTTTGAATATAGAAACTACTAGTTGCAAAACTGAGCATAGATCAACTGGCCAAGGCACCATAATCTCGACTAAAAGGTCGTAAGTTCAAATTTCCGCCCGAGATATTGTTGACTGAAACTCCCTGTCAGATGACTAAACTTGTTACTAAACCCAAAAGCAGCTAATAAGCTAGGACCTATTAAATCTTTTTAGTTATATAAGTTGAATCTGTGTCTTAGTCAGGTGACCAATGAAAGTTTAAGTTCTTGTTACTATGCATGAATGATGTATTCTGAGTTAGGGCCATTATTACCTTGTTATTTACAGGAAAGTGAACAATACTTGTTGGCTTCATTGTCCACAGAACTGATGGTATTGGGCTCTCAGCACCTCAAGTGGGAGTTAATGTTCAACTGATGGTATTTAATCCAGTCGGTGAACGTGGTGAAGGGGAAGAAATTGTTCTTGTGAACCCAAAAGTTTACAGATATTCCAAGAAAACTGTACTCTTTAATGAAGGTTGCTTATCATTCCCAAGGATATATGCTGATGTAGAGGTATTATTCAATATTGGATCTTTTCTCTCACTGCCCAGTGTCTACTTTCTAGTTTGATGCTCATTAAGGATATCGAGTATCTTTTTCAGAACTTGATATAATTTTTTTTTTAGCTAATTTAAATTCCAATTGGCCTACGAAACCATCATGAGTTGACCTAGTGGTCAATAAGGGACATGGGAAAAATAAAAAGCTTAAAAGGAATGGGCTCAATCCATGATAGCCACCTACCTAGGATTTTATATCCTACGTGTCGAGGTGCGTGCAAGCTGGCCCAGACATTCACAGATTAAAAAAAAAAAAATCCAATTGGCCAAGTACTTGGATATTTTCAAACAAATCTTGCAAAAGATAAATTTGTTCTAACTTCTAATATTTGGCGTTGTTAGACACAAAATTGGAACTTCAAGGATCTATTAAGCATTTTCTAGAGTTTAGAGACTTATTAAACACAACTCTAAAAGTTTAGGGATCAAACTTAAAATTTAACCTATATTTAATATTTGTCTGGCCAATTAGTTGTTCTTCTAATGCTTTGTCAGAATTGAAGTTCCAATGTAGTCTCTCTAGTTGCGAGACGATGGTTTTACATTCTTTGAGTTTGTATAAAACATTTCACTTTGAAGGACTAAGCATTTCTAGCTACCAATTTCTGTTTCTTATTCTTTGAGTTGTAATTGTGATGATGCGAGTTCATTCTTTTGTAATTGCAGAGACCAGAATCAGTTAAGATCGATGCACGAGACATCAGTGGTACAAGGTTCATGGTCAACTTGTCAGGACTTCCTGCAAGAGTGTTCCAGCATGAATTTGACCATTTGCAGGTCTTTTAATTAGTTTAAGATTAAGTTATTATGCACGACGTTCCCTTTTACAATGTTTAATTTAACCCGTGTCATACACATTCTTCCTCACAATCTCTGTTTTCAGCAACATTGCTCAATGGCATTCAAACAGTGCATGATTAAGTTGGTCTGGACCCTGTGATAATATCCACCAAGCATTTGGGTTAGCTCACATTTTTTCTAACAGTACCGTTAAATTTGCAGGGAATTTTGTTCTTTGACAGAATGACAGATGAAGTACTTGATACCATTCGCCCTCAGCTGCAGGTGAGTGGCCCCCCTGCTCATTGTTTCATCTTCTTTCTGATCCAAAAAAATACCTTTGAACTATAGGGAATGACATATTCTAGTGATTTTTTAACTTGTTTAATATTGGTAAAAAAACCATATTGGATTGGCTTAGTGGCCAATAATAGTCAATCTATATAGTAAAGGGCTTAGAAGGAATGATTTCAAGTCATAATCGCTACCTACCTAAGATTTCATGTCTTACAAGTTTCTAGGTAGCCAAATGTTGTAGTGTCAAACAATTTTCCAGTGAGAATAGTTGAATTGCGTGCATGCTAGTGCTAGCCCAAAAGAAAATTAACAATCATTGGTATGCACAAACAAGAAGTGAAAAGAAGCACAAGAACCCCCAACTAGAGTGTGGATAGGGTTGGATTTCCTCGTGTAAAAGATGCTTTATATGGTATGCATCCACTCAGAACAAAATATGGTATATACCCTTATACTGAGGTTTATTTCCTTCATTTTCTTCAGTTGTTTAGTTTGATAGCTATCGTGAAGTATGACTTTTGCTGTTAAGAACGAAATTCTGATGAAAACATGTTCAGATAACTATTTTTGAGAAGTTATTTTTTCTCATTTTGTTTTTATTTATTTTTACAGATAACTTAGAATTTGAAACAACCAAAGTTGCTCTTCTTTCCAAGATGGATTTATGTGTTTTCTTTCTAGAATTATGGATTTGTGTCATTTTAGGAGTAGAATGACACTTTACAAGTAACTCAATCACAATGTTTAGAAACAACTTTGAAAATAAAATTCAATAGTTGTTTAAGTGCATTGGAAATGTATATGCCGATTGATCTATCTTGTTAAGTTAAATGAGAACTAATTACTTCATAACTTCATAGATAATTGAAGCTGCGCATGTACCAGCCCCCAAATGTATTATGTGCCTTGGAAATTGATGCTAGTTTTTACAAGTCACTCAATCACAAATTTTACAAACAACTACGAAATAAAACTTAAAAGTCATTTTTTAGAATGAACTTGAAACACAGCGTCTCGGTTACCCCTTGTTCTAAAGGAGTGCTTCGGAACGTATATCCAAACTGGTCTGTCTAGTTGAGTTAGAGAGTACTGATTACTTCGTGACTTTTTTGATAATTGGGTCTGCGCATGTATCAGCCCCCAGCTGAATTGTGACTTTGCAATTGAAAAGAATTGAGCTGAAGTTGTTCTTTATTTACTTTTGATGCAGGCCCTGGAAAAGAAGTATGAAGATAAAACTGGATTACCAAGTCCTGAAAGAATAGAGAACTTCAGAACAAGGAAGGTTGCTGCTGGTTTTGGAAAATAATGATCACAGAGGTTTGATTACACATTATGAAAATGAATGCTACTAACTCTAATCAATTGTATGATAGAAAGAAATTTGATTTGATAGTTTGATGGTTTGATGGTTTTCTTATCCTTGAACCATATGATTACAAGAAGATATATATTTTTTTGTAAGTTACTTAAATCGGTACGTTGAATCTTTCTTATGTTCCGGTAAGTTTTAGTCAAAGGATGAGGGACGATTATGAAACTTTC

mRNA sequence

ATGGAAGTCGCCAAAGATGGAAGGTCGGAGAAATGCTCCCTCCTTTTGTCAGCTCCTCCTTCCTCCTTGGGAATTGCCTCTACTCCCCCTTCTCTCAAATTTTTGTCTCTACCAGGGATATCTCATTCTCTAAAAGGGGCTACCTTACTATTGCGTCCCGCCCTTGTCTCAGCTCTGCTCCTCCGCCGGTCCACCGTCGGCGCCCATTCCGGCCAATTTCCGGCGGCCATGGCCTACACTGCTCGATTGCACCTTTCTTTACCACACGCTCTTCTTCCTACTTTATCCCGCCGGTCGGCTCTTCCCGCCGTTTTCCGCCGGCTAAGCCGTGTTTCCTCAACCGGCCAGTTCTTCTCCCATTCGAGTAAGTCCAGCCCTTCAACGACTCTGGTTTACGCGCAGGCCAAGCGAGGATTCTCCGCCAGAGAAGATGTAGCTTCTTCTGCCGATCTTGAATTTGAGGCGCCGCTCAAAATTGTGGAATATCCGGACCCAATACTTAGAGCAAAGAATAAGCGTATTGATTCATTTGATGATAATCTGAAGAAGTTAGTGCAGGAAATGTTCGATGTAATGTATAAAACTGATGGTATTGGGCTCTCAGCACCTCAAGTGGGAGTTAATGTTCAACTGATGGTATTTAATCCAGTCGGTGAACGTGGTGAAGGGGAAGAAATTGTTCTTGTGAACCCAAAAGTTTACAGATATTCCAAGAAAACTGTACTCTTTAATGAAGGTTGCTTATCATTCCCAAGGATATATGCTGATGTAGAGAGACCAGAATCAGTTAAGATCGATGCACGAGACATCAGTGGTACAAGGTTCATGGTCAACTTGTCAGGACTTCCTGCAAGAGTGTTCCAGCATGAATTTGACCATTTGCAGGGAATTTTGTTCTTTGACAGAATGACAGATGAAGTACTTGATACCATTCGCCCTCAGCTGCAGGCCCTGGAAAAGAAGTATGAAGATAAAACTGGATTACCAAGTCCTGAAAGAATAGAGAACTTCAGAACAAGGAAGGTTGCTGCTGGTTTTGGAAAATAA

Coding sequence (CDS)

ATGGAAGTCGCCAAAGATGGAAGGTCGGAGAAATGCTCCCTCCTTTTGTCAGCTCCTCCTTCCTCCTTGGGAATTGCCTCTACTCCCCCTTCTCTCAAATTTTTGTCTCTACCAGGGATATCTCATTCTCTAAAAGGGGCTACCTTACTATTGCGTCCCGCCCTTGTCTCAGCTCTGCTCCTCCGCCGGTCCACCGTCGGCGCCCATTCCGGCCAATTTCCGGCGGCCATGGCCTACACTGCTCGATTGCACCTTTCTTTACCACACGCTCTTCTTCCTACTTTATCCCGCCGGTCGGCTCTTCCCGCCGTTTTCCGCCGGCTAAGCCGTGTTTCCTCAACCGGCCAGTTCTTCTCCCATTCGAGTAAGTCCAGCCCTTCAACGACTCTGGTTTACGCGCAGGCCAAGCGAGGATTCTCCGCCAGAGAAGATGTAGCTTCTTCTGCCGATCTTGAATTTGAGGCGCCGCTCAAAATTGTGGAATATCCGGACCCAATACTTAGAGCAAAGAATAAGCGTATTGATTCATTTGATGATAATCTGAAGAAGTTAGTGCAGGAAATGTTCGATGTAATGTATAAAACTGATGGTATTGGGCTCTCAGCACCTCAAGTGGGAGTTAATGTTCAACTGATGGTATTTAATCCAGTCGGTGAACGTGGTGAAGGGGAAGAAATTGTTCTTGTGAACCCAAAAGTTTACAGATATTCCAAGAAAACTGTACTCTTTAATGAAGGTTGCTTATCATTCCCAAGGATATATGCTGATGTAGAGAGACCAGAATCAGTTAAGATCGATGCACGAGACATCAGTGGTACAAGGTTCATGGTCAACTTGTCAGGACTTCCTGCAAGAGTGTTCCAGCATGAATTTGACCATTTGCAGGGAATTTTGTTCTTTGACAGAATGACAGATGAAGTACTTGATACCATTCGCCCTCAGCTGCAGGCCCTGGAAAAGAAGTATGAAGATAAAACTGGATTACCAAGTCCTGAAAGAATAGAGAACTTCAGAACAAGGAAGGTTGCTGCTGGTTTTGGAAAATAA

Protein sequence

MEVAKDGRSEKCSLLLSAPPSSLGIASTPPSLKFLSLPGISHSLKGATLLLRPALVSALLLRRSTVGAHSGQFPAAMAYTARLHLSLPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAKRGFSAREDVASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGK

Homology

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BLAST of Spg001696 vs. NCBI nr
Match: XP_022989167.1 (peptide deformylase 1B, chloroplastic [Cucurbita maxima])

HSP 1 Score: 496.5 bits (1277), Expect = 1.9e-136
Identity = 254/274 (92.70%), Postives = 263/274 (95.99%), Query Frame = 0


Query: 77  MAYTARLHLSLPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAK 136
           MAYTARLH+SLPHALLPTLSRRSALPAV RRLSR SSTG+  S+SSK  P TTLVYAQAK
Sbjct: 1   MAYTARLHVSLPHALLPTLSRRSALPAVLRRLSRFSSTGRLLSNSSKFRPPTTLVYAQAK 60

Query: 137 RGFSARE-DVASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 196
           RGFS +E DVASSADLEFEAPL+IVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT
Sbjct: 61  RGFSTKEDDVASSADLEFEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 120

Query: 197 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYA 256
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKT+LFNEGCLSFPRIYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTILFNEGCLSFPRIYA 180

Query: 257 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL 316
           DV+RPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQG+LFFDRMTDEVLDTIRPQL
Sbjct: 181 DVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQL 240

Query: 317 QALEKKYEDKTGLPSPERIENFRTR-KVAAGFGK 349
           QALEKKYED+TGLPSPERIEN RTR KVAAGFGK
Sbjct: 241 QALEKKYEDRTGLPSPERIENLRTRKKVAAGFGK 274

[Close]

BLAST of Spg001696 vs. NCBI nr
Match: XP_022928203.1 (peptide deformylase 1B, chloroplastic [Cucurbita moschata])

HSP 1 Score: 496.1 bits (1276), Expect = 2.4e-136
Identity = 255/274 (93.07%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 77  MAYTARLHLSLPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAK 136
           MAYTARLHLSLPHALLPTLSRRSALPAV RRLSR SSTG+  S+SSK  P TTLVYAQAK
Sbjct: 1   MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAK 60

Query: 137 RGFSARE-DVASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 196
           RGFS +E DVASSADLEFEAPL+IVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT
Sbjct: 61  RGFSTKEDDVASSADLEFEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 120

Query: 197 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYA 256
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFP IYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYA 180

Query: 257 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL 316
           DV+RPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQG+LFFDRMTDEVLDTIRPQL
Sbjct: 181 DVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQL 240

Query: 317 QALEKKYEDKTGLPSPERIENFRTR-KVAAGFGK 349
           QALEKKYED+TGLPSPERIEN RTR KVAAGFGK
Sbjct: 241 QALEKKYEDRTGLPSPERIENLRTRKKVAAGFGK 274

[Close]

BLAST of Spg001696 vs. NCBI nr
Match: XP_023530509.1 (peptide deformylase 1B, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493.4 bits (1269), Expect = 1.6e-135
Identity = 254/274 (92.70%), Postives = 261/274 (95.26%), Query Frame = 0


Query: 77  MAYTARLHLSLPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAK 136
           MAYTARLHLSLPHALLPTLSRRSALP V RRLSR SSTG+  S+SSK  P TTLVYAQAK
Sbjct: 1   MAYTARLHLSLPHALLPTLSRRSALPTVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAK 60

Query: 137 RGFSARE-DVASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 196
           RGFS +E DVASSADLEFEAPL+IVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT
Sbjct: 61  RGFSTKEDDVASSADLEFEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 120

Query: 197 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYA 256
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYA 180

Query: 257 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL 316
           DV+RPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQG+LFFDRMTDEVLDTIRPQL
Sbjct: 181 DVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQL 240

Query: 317 QALEKKYEDKTGLPSPERIENFRTR-KVAAGFGK 349
           QALEKKYED+TGL SPERIEN RTR KVAAGFGK
Sbjct: 241 QALEKKYEDRTGLRSPERIENLRTRKKVAAGFGK 274

[Close]

BLAST of Spg001696 vs. NCBI nr
Match: XP_038904020.1 (peptide deformylase 1B, chloroplastic [Benincasa hispida])

HSP 1 Score: 483.8 bits (1244), Expect = 1.2e-132
Identity = 247/273 (90.48%), Postives = 255/273 (93.41%), Query Frame = 0


Query: 77  MAYTARLHLSLPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAK 136
           M YT RLHLSL HALLPT+SRR +LPAVFRRLS    TG+FFSH SK  P +T+VYAQAK
Sbjct: 1   MEYTTRLHLSLQHALLPTVSRRLSLPAVFRRLSGFPLTGKFFSHWSKFRPPSTVVYAQAK 60

Query: 137 RGFSARE-DVASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 196
           RGFSA+E DVA S DLEFEAPLKIVEYPD ILRAKNKRIDSFDDNLKKLV+EMFDVMYKT
Sbjct: 61  RGFSAKEDDVAKSVDLEFEAPLKIVEYPDKILRAKNKRIDSFDDNLKKLVREMFDVMYKT 120

Query: 197 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYA 256
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+VYRYSKKTVLFNEGCLSFP IYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVYRYSKKTVLFNEGCLSFPMIYA 180

Query: 257 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL 316
           DVERPESVKIDARDISGTRFM NLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL
Sbjct: 181 DVERPESVKIDARDISGTRFMFNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL 240

Query: 317 QALEKKYEDKTGLPSPERIENFRTRKVAAGFGK 349
           QALEKKYEDKTGLPSPERIENFRTRKVAAGFGK
Sbjct: 241 QALEKKYEDKTGLPSPERIENFRTRKVAAGFGK 273

[Close]

BLAST of Spg001696 vs. NCBI nr
Match: XP_022152139.1 (peptide deformylase 1B, chloroplastic [Momordica charantia])

HSP 1 Score: 479.6 bits (1233), Expect = 2.4e-131
Identity = 248/273 (90.84%), Postives = 256/273 (93.77%), Query Frame = 0


Query: 77  MAYTARLHLSLPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAK 136
           MAYTARLHLSL HALLP   RR ALPAVFRRLS  SST QFFSHSSK  P +TLVYAQAK
Sbjct: 1   MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAK 60

Query: 137 RGFSARE-DVASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 196
           RGFSA+E D A SADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLV EMFDVMYKT
Sbjct: 61  RGFSAKEDDAALSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVHEMFDVMYKT 120

Query: 197 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYA 256
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+V+RYSKKTVLFNEGCLSFPRIYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYA 180

Query: 257 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL 316
           DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIR QL
Sbjct: 181 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQL 240

Query: 317 QALEKKYEDKTGLPSPERIENFRT-RKVAAGFG 348
           QALEKKYE++TGLPSPERIENFRT +KVAAG+G
Sbjct: 241 QALEKKYEERTGLPSPERIENFRTKKKVAAGYG 273

[Close]

BLAST of Spg001696 vs. ExPASy Swiss-Prot
Match: Q9FV54 (Peptide deformylase 1B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PDF1B PE=2 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.1e-94
Identity = 175/266 (65.79%), Postives = 208/266 (78.20%), Query Frame = 0


Query: 86  SLPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAKRGFSAR--- 145
           S    L P LSR S+   +   L R  S    F  +S + P    VYAQA+R  S++   
Sbjct: 13  SFTRFLRPLLSRNSSPSPISYSLHRYKSANCLFFSASSNKPPKLAVYAQARRVLSSKTKG 72

Query: 146 EDVASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSA 205
           +++A+ ADL F  PLKIVEYPDPILRAKNKRID+FD NLKKLV EMFD+MYKTDGIGLSA
Sbjct: 73  DEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLVDEMFDIMYKTDGIGLSA 132

Query: 206 PQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYADVERPES 265
           PQVG+NVQLMVFN  GERGEGEEIVLVNP+V RYS++ + + EGCLSFP I+ DV+RPES
Sbjct: 133 PQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGCLSFPMIHGDVKRPES 192

Query: 266 VKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQLQALEKKY 325
           VK+DA+DI+GTRF ++LS LPARVFQHEFDHLQG+LFFD+MTDEVLDTIR +L ALEKKY
Sbjct: 193 VKVDAQDINGTRFEISLSALPARVFQHEFDHLQGVLFFDKMTDEVLDTIREKLVALEKKY 252

Query: 326 EDKTGLPSPERIENFRTRKVAAGFGK 349
           ED+TGLP+PE I   + +K A GFGK
Sbjct: 253 EDRTGLPTPESINTRKIKKAAVGFGK 278

[Close]

BLAST of Spg001696 vs. ExPASy Swiss-Prot
Match: Q9FUZ2 (Peptide deformylase 1B, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PDF1B PE=1 SV=2)

HSP 1 Score: 345.5 bits (885), Expect = 7.0e-94
Identity = 175/262 (66.79%), Postives = 209/262 (79.77%), Query Frame = 0


Query: 87  LPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAKRGFSAREDVA 146
           L   LLP LSRR+    +     R+ ST  F S  +++SP T+ V A+ KR     + VA
Sbjct: 13  LSRILLPVLSRRAT--TLSAGYGRLKSTVTFCSTVNRTSPLTSSVRAEVKRVSRKDDKVA 72

Query: 147 SSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVG 206
           S+ D++FE PLKIVEYPDPILRAKNKRID FD+NLK LV  MFDVMYKTDGIGLSAPQVG
Sbjct: 73  SATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVG 132

Query: 207 VNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYADVERPESVKID 266
           +NVQLMVFNP GE GEG+EIVLVNPK+ +YS K V F+EGCLSFP IYA+V RP+SVKID
Sbjct: 133 LNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKID 192

Query: 267 ARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQLQALEKKYEDKT 326
           ARDI+G RF ++LS LPAR+FQHE+DHL+G+LFFDRMTD+VLD+IR +L+ALEKKYE+KT
Sbjct: 193 ARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEEKT 252

Query: 327 GLPSPERIENFRTRKVAAGFGK 349
           GLPSPER+E  + RK   GFGK
Sbjct: 253 GLPSPERVEARQKRKAGVGFGK 272

[Close]

BLAST of Spg001696 vs. ExPASy Swiss-Prot
Match: Q5VNN5 (Peptide deformylase 1B, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PDF1B PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 8.0e-82
Identity = 162/277 (58.48%), Postives = 199/277 (71.84%), Query Frame = 0


Query: 81  ARLHLSLPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAKRGFS 140
           ARLHL L   L    S  + L A   R   +S  G              L  A+A+RGF 
Sbjct: 3   ARLHLRLGPRLRGFASSFAPLLAAHPRALPLSRMGSV----------APLAAARARRGFG 62

Query: 141 AR---------EDVASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDV 200
           +          ED A++ADL+FE PLK+V+YPDPILRA+NKRI++FDDNL+ L  EMFDV
Sbjct: 63  SAVATAPPAEDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDV 122

Query: 201 MYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFP 260
           MYKTDGIGLSAPQVGVNVQLMVFNP G +GEGEEIVLVNP VY+ SK+ +++ EGCLSFP
Sbjct: 123 MYKTDGIGLSAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFP 182

Query: 261 RIYADVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTI 320
            IYA+V RP++VKIDA+D++G +  V LSGL ARVFQHEFDHLQGILFFDRM+ +VL+++
Sbjct: 183 GIYANVVRPDNVKIDAQDVTGAKIKVKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESV 242

Query: 321 RPQLQALEKKYEDKTGLPSPERIENFRTRKVAAGFGK 349
           R  L+ LEKKYE+ TGL SPE IEN++ RK    F +
Sbjct: 243 REGLKDLEKKYEESTGLVSPESIENYKGRKDLISFSR 269

[Close]

BLAST of Spg001696 vs. ExPASy Swiss-Prot
Match: Q7UHZ5 (Peptide deformylase OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) OX=243090 GN=def PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.6e-34
Identity = 74/175 (42.29%), Postives = 105/175 (60.00%), Query Frame = 0


Query: 156 PLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFN 215
           PL I+ +P P LR  ++ I   D  LK +  EM D+MY+ DG+GL+A QV + +++ V N
Sbjct: 2   PLSIIHFPHPTLRHVSRPIVRVDAKLKSMADEMLDLMYEFDGVGLAANQVDLPIRMFVAN 61

Query: 216 PVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF 275
           P G+R EGE  V++NP++ R  K      EGCLS P +Y  V+RP++V++   D+ G   
Sbjct: 62  PTGKRDEGESWVILNPEIDR-PKGNDTAQEGCLSVPGLYGQVKRPKTVRLRGFDLQGNEI 121

Query: 276 MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQLQALEKKYEDKTGLPS 331
              L G  ARV QHE DHL GI+FFDR+ +E L  +   L+  +  YE K G  S
Sbjct: 122 NQVLDGFMARVVQHEVDHLDGIMFFDRIGEEGLRDLEGHLEEFKTDYESKQGTGS 175

[Close]

BLAST of Spg001696 vs. ExPASy Swiss-Prot
Match: Q7NIF5 (Peptide deformylase 2 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=def2 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.6e-32
Identity = 70/160 (43.75%), Postives = 98/160 (61.25%), Query Frame = 0


Query: 156 PLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFN 215
           PL I    D +LR  +K+I   +D ++KL Q+M   MY  DGIGL+APQVGVN +++V +
Sbjct: 16  PLAIHTLGDRVLRQGSKQISGINDEVRKLAQQMLQTMYSADGIGLAAPQVGVNKRMIVVD 75

Query: 216 PVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF 275
              E      +VL+NP + ++S    +  EGCLS P IYADV RPE V    RD++G   
Sbjct: 76  IDPENAARPPLVLINPLIKQFSSDLAVDQEGCLSVPSIYADVRRPERVVATYRDLNGRPV 135

Query: 276 MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL 316
            +  +GL AR  QHE DHL G+LF DR+ +++   + PQL
Sbjct: 136 TLEATGLLARCIQHEIDHLDGVLFVDRVENQI--ALAPQL 173

[Close]

BLAST of Spg001696 vs. ExPASy TrEMBL
Match: A0A6J1JF23 (Peptide deformylase OS=Cucurbita maxima OX=3661 GN=LOC111486320 PE=3 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 9.0e-137
Identity = 254/274 (92.70%), Postives = 263/274 (95.99%), Query Frame = 0


Query: 77  MAYTARLHLSLPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAK 136
           MAYTARLH+SLPHALLPTLSRRSALPAV RRLSR SSTG+  S+SSK  P TTLVYAQAK
Sbjct: 1   MAYTARLHVSLPHALLPTLSRRSALPAVLRRLSRFSSTGRLLSNSSKFRPPTTLVYAQAK 60

Query: 137 RGFSARE-DVASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 196
           RGFS +E DVASSADLEFEAPL+IVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT
Sbjct: 61  RGFSTKEDDVASSADLEFEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 120

Query: 197 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYA 256
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKT+LFNEGCLSFPRIYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTILFNEGCLSFPRIYA 180

Query: 257 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL 316
           DV+RPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQG+LFFDRMTDEVLDTIRPQL
Sbjct: 181 DVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQL 240

Query: 317 QALEKKYEDKTGLPSPERIENFRTR-KVAAGFGK 349
           QALEKKYED+TGLPSPERIEN RTR KVAAGFGK
Sbjct: 241 QALEKKYEDRTGLPSPERIENLRTRKKVAAGFGK 274

[Close]

BLAST of Spg001696 vs. ExPASy TrEMBL
Match: A0A6J1EN89 (Peptide deformylase OS=Cucurbita moschata OX=3662 GN=LOC111435101 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 1.2e-136
Identity = 255/274 (93.07%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 77  MAYTARLHLSLPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAK 136
           MAYTARLHLSLPHALLPTLSRRSALPAV RRLSR SSTG+  S+SSK  P TTLVYAQAK
Sbjct: 1   MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAK 60

Query: 137 RGFSARE-DVASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 196
           RGFS +E DVASSADLEFEAPL+IVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT
Sbjct: 61  RGFSTKEDDVASSADLEFEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 120

Query: 197 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYA 256
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFP IYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYA 180

Query: 257 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL 316
           DV+RPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQG+LFFDRMTDEVLDTIRPQL
Sbjct: 181 DVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQL 240

Query: 317 QALEKKYEDKTGLPSPERIENFRTR-KVAAGFGK 349
           QALEKKYED+TGLPSPERIEN RTR KVAAGFGK
Sbjct: 241 QALEKKYEDRTGLPSPERIENLRTRKKVAAGFGK 274

[Close]

BLAST of Spg001696 vs. ExPASy TrEMBL
Match: A0A6J1DF55 (Peptide deformylase OS=Momordica charantia OX=3673 GN=LOC111019929 PE=3 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 1.1e-131
Identity = 248/273 (90.84%), Postives = 256/273 (93.77%), Query Frame = 0


Query: 77  MAYTARLHLSLPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAK 136
           MAYTARLHLSL HALLP   RR ALPAVFRRLS  SST QFFSHSSK  P +TLVYAQAK
Sbjct: 1   MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAK 60

Query: 137 RGFSARE-DVASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 196
           RGFSA+E D A SADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLV EMFDVMYKT
Sbjct: 61  RGFSAKEDDAALSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVHEMFDVMYKT 120

Query: 197 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYA 256
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+V+RYSKKTVLFNEGCLSFPRIYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYA 180

Query: 257 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL 316
           DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIR QL
Sbjct: 181 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQL 240

Query: 317 QALEKKYEDKTGLPSPERIENFRT-RKVAAGFG 348
           QALEKKYE++TGLPSPERIENFRT +KVAAG+G
Sbjct: 241 QALEKKYEERTGLPSPERIENFRTKKKVAAGYG 273

[Close]

BLAST of Spg001696 vs. ExPASy TrEMBL
Match: A0A0A0LG66 (Peptide deformylase OS=Cucumis sativus OX=3659 GN=Csa_3G837630 PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 5.0e-127
Identity = 241/273 (88.28%), Postives = 250/273 (91.58%), Query Frame = 0


Query: 77  MAYTARLHLSLPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAK 136
           MAY  RLH+SLPHALLPT+S   + PAVFRRLS  SST + FSHSSK    +TLVYAQAK
Sbjct: 1   MAYATRLHISLPHALLPTVSCWLSPPAVFRRLSGFSSTCKLFSHSSKFKAPSTLVYAQAK 60

Query: 137 RGFSARE-DVASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 196
           RGFSA+E DVASS DLEFEAPLKIVEYPDPILRAKNKRI SFDDNLKKLVQEMFDVMYKT
Sbjct: 61  RGFSAKEDDVASSVDLEFEAPLKIVEYPDPILRAKNKRIGSFDDNLKKLVQEMFDVMYKT 120

Query: 197 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYA 256
           DGIGLSAPQVGVNVQLMVFN VGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFP IYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNSVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPMIYA 180

Query: 257 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL 316
           DVERPES+KIDARDISGTRFMVNLSGL ARVFQHEFDHLQG LFFDRMTDEVL+TIRPQL
Sbjct: 181 DVERPESIKIDARDISGTRFMVNLSGLSARVFQHEFDHLQGTLFFDRMTDEVLETIRPQL 240

Query: 317 QALEKKYEDKTGLPSPERIENFRTRKVAAGFGK 349
           QALEKKYED+TGLPSPERIENFR RKV AGFGK
Sbjct: 241 QALEKKYEDRTGLPSPERIENFR-RKVGAGFGK 272

[Close]

BLAST of Spg001696 vs. ExPASy TrEMBL
Match: A0A1S3B8C2 (Peptide deformylase OS=Cucumis melo OX=3656 GN=LOC103487104 PE=3 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 7.1e-126
Identity = 240/273 (87.91%), Postives = 248/273 (90.84%), Query Frame = 0


Query: 77  MAYTARLHLSLPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAK 136
           MAYT RLH+SLP ALLPT+S   + P VFRRLS  SST    SHSSK    +TLVYAQAK
Sbjct: 1   MAYTTRLHISLPRALLPTVSCWLSPPVVFRRLSGFSSTCTLISHSSKFRAPSTLVYAQAK 60

Query: 137 RGFSARE-DVASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 196
           RGF A+E DVASS DLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT
Sbjct: 61  RGFYAKEDDVASSVDLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKT 120

Query: 197 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYA 256
           DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTV FNEGCLSFP IYA
Sbjct: 121 DGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVPFNEGCLSFPMIYA 180

Query: 257 DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQL 316
           DVERPES+KIDARDI GTRFMVNLSGL ARVFQHEFDHLQGILFFDRMTDEVL+TIRPQL
Sbjct: 181 DVERPESIKIDARDIRGTRFMVNLSGLSARVFQHEFDHLQGILFFDRMTDEVLETIRPQL 240

Query: 317 QALEKKYEDKTGLPSPERIENFRTRKVAAGFGK 349
           QALEKKYED+TGLPSPERIENFR RKVAAGFGK
Sbjct: 241 QALEKKYEDRTGLPSPERIENFR-RKVAAGFGK 272

[Close]

BLAST of Spg001696 vs. TAIR 10
Match: AT5G14660.1 (peptide deformylase 1B )

HSP 1 Score: 345.5 bits (885), Expect = 4.9e-95
Identity = 175/262 (66.79%), Postives = 209/262 (79.77%), Query Frame = 0


Query: 87  LPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAKRGFSAREDVA 146
           L   LLP LSRR+    +     R+ ST  F S  +++SP T+ V A+ KR     + VA
Sbjct: 13  LSRILLPVLSRRAT--TLSAGYGRLKSTVTFCSTVNRTSPLTSSVRAEVKRVSRKDDKVA 72

Query: 147 SSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVG 206
           S+ D++FE PLKIVEYPDPILRAKNKRID FD+NLK LV  MFDVMYKTDGIGLSAPQVG
Sbjct: 73  SATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVG 132

Query: 207 VNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYADVERPESVKID 266
           +NVQLMVFNP GE GEG+EIVLVNPK+ +YS K V F+EGCLSFP IYA+V RP+SVKID
Sbjct: 133 LNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKID 192

Query: 267 ARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQLQALEKKYEDKT 326
           ARDI+G RF ++LS LPAR+FQHE+DHL+G+LFFDRMTD+VLD+IR +L+ALEKKYE+KT
Sbjct: 193 ARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEEKT 252

Query: 327 GLPSPERIENFRTRKVAAGFGK 349
           GLPSPER+E  + RK   GFGK
Sbjct: 253 GLPSPERVEARQKRKAGVGFGK 272

[Close]

BLAST of Spg001696 vs. TAIR 10
Match: AT5G14660.2 (peptide deformylase 1B )

HSP 1 Score: 345.5 bits (885), Expect = 4.9e-95
Identity = 175/262 (66.79%), Postives = 209/262 (79.77%), Query Frame = 0


Query: 87  LPHALLPTLSRRSALPAVFRRLSRVSSTGQFFSHSSKSSPSTTLVYAQAKRGFSAREDVA 146
           L   LLP LSRR+    +     R+ ST  F S  +++SP T+ V A+ KR     + VA
Sbjct: 13  LSRILLPVLSRRAT--TLSAGYGRLKSTVTFCSTVNRTSPLTSSVRAEVKRVSRKDDKVA 72

Query: 147 SSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVG 206
           S+ D++FE PLKIVEYPDPILRAKNKRID FD+NLK LV  MFDVMYKTDGIGLSAPQVG
Sbjct: 73  SATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVG 132

Query: 207 VNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYADVERPESVKID 266
           +NVQLMVFNP GE GEG+EIVLVNPK+ +YS K V F+EGCLSFP IYA+V RP+SVKID
Sbjct: 133 LNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKID 192

Query: 267 ARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRPQLQALEKKYEDKT 326
           ARDI+G RF ++LS LPAR+FQHE+DHL+G+LFFDRMTD+VLD+IR +L+ALEKKYE+KT
Sbjct: 193 ARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEEKT 252

Query: 327 GLPSPERIENFRTRKVAAGFGK 349
           GLPSPER+E  + RK   GFGK
Sbjct: 253 GLPSPERVEARQKRKAGVGFGK 272

[Close]

BLAST of Spg001696 vs. TAIR 10
Match: AT1G15390.1 (peptide deformylase 1A )

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-22
Identity = 60/171 (35.09%), Postives = 87/171 (50.88%), Query Frame = 0


Query: 158 KIVEYPDPILRAKNKRIDSFD---DNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVF 217
           +IV   DP+L  K + +D  +   + ++K++ +M  VM    G+GL+APQ+GV ++++V 
Sbjct: 82  EIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLRIIVL 141

Query: 218 NP--------------VGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPRIYADVERP 277
                             ER   + +V+VNP +   S K  LF EGCLS     A VER 
Sbjct: 142 EDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKALFFEGCLSVDGFRAAVERY 201

Query: 278 ESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTI 312
             V +   D  G R  VN SG  AR+ QHE DHL G L+ D+M      T+
Sbjct: 202 LEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKMVPRTFRTV 252

The following BLAST results are available for this feature:

BLAST of Spg001696 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989167.1	1.9e-136	92.70	peptide deformylase 1B, chloroplastic [Cucurbita maxima]	[more]
XP_022928203.1	2.4e-136	93.07	peptide deformylase 1B, chloroplastic [Cucurbita moschata]	[more]
XP_023530509.1	1.6e-135	92.70	peptide deformylase 1B, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_038904020.1	1.2e-132	90.48	peptide deformylase 1B, chloroplastic [Benincasa hispida]	[more]
XP_022152139.1	2.4e-131	90.84	peptide deformylase 1B, chloroplastic [Momordica charantia]	[more]

BLAST of Spg001696 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FV54	1.1e-94	65.79	Peptide deformylase 1B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PDF1B P...	[more]
Q9FUZ2	7.0e-94	66.79	Peptide deformylase 1B, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3...	[more]
Q5VNN5	8.0e-82	58.48	Peptide deformylase 1B, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q7UHZ5	1.6e-34	42.29	Peptide deformylase OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / ...	[more]
Q7NIF5	2.6e-32	43.75	Peptide deformylase 2 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX...	[more]

BLAST of Spg001696 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JF23	9.0e-137	92.70	Peptide deformylase OS=Cucurbita maxima OX=3661 GN=LOC111486320 PE=3 SV=1	[more]
A0A6J1EN89	1.2e-136	93.07	Peptide deformylase OS=Cucurbita moschata OX=3662 GN=LOC111435101 PE=3 SV=1	[more]
A0A6J1DF55	1.1e-131	90.84	Peptide deformylase OS=Momordica charantia OX=3673 GN=LOC111019929 PE=3 SV=1	[more]
A0A0A0LG66	5.0e-127	88.28	Peptide deformylase OS=Cucumis sativus OX=3659 GN=Csa_3G837630 PE=3 SV=1	[more]
A0A1S3B8C2	7.1e-126	87.91	Peptide deformylase OS=Cucumis melo OX=3656 GN=LOC103487104 PE=3 SV=1	[more]

BLAST of Spg001696 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14660.1	4.9e-95	66.79	peptide deformylase 1B	[more]
AT5G14660.2	4.9e-95	66.79	peptide deformylase 1B	[more]
AT1G15390.1	2.5e-22	35.09	peptide deformylase 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 167..187
None	No IPR available	PANTHER	PTHR10458:SF2	PEPTIDE DEFORMYLASE, MITOCHONDRIAL	coord: 106..323
IPR023635	Peptide deformylase	PRINTS	PR01576	PDEFORMYLASE	coord: 257..275 score: 34.21 coord: 276..305 score: 47.28 coord: 186..215 score: 40.68 coord: 245..256 score: 57.1
IPR023635	Peptide deformylase	PFAM	PF01327	Pep_deformylase	coord: 157..305 e-value: 1.3E-49 score: 167.9
IPR023635	Peptide deformylase	TIGRFAM	TIGR00079	TIGR00079	coord: 157..306 e-value: 1.3E-46 score: 156.1
IPR023635	Peptide deformylase	PANTHER	PTHR10458	PEPTIDE DEFORMYLASE	coord: 106..323
IPR023635	Peptide deformylase	HAMAP	MF_00163	Pep_deformylase	coord: 155..318 score: 27.825769
IPR023635	Peptide deformylase	CDD	cd00487	Pep_deformylase	coord: 159..299 e-value: 2.95419E-65 score: 201.175
IPR036821	Peptide deformylase superfamily	GENE3D	3.90.45.10	Peptide deformylase	coord: 141..333 e-value: 2.8E-67 score: 227.3
IPR036821	Peptide deformylase superfamily	SUPERFAMILY	56420	Peptide deformylase	coord: 156..325

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg001696.1	Spg001696.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018206	peptidyl-methionine modification
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0042586	peptide deformylase activity