Spg001622 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGAAAGCACCTGGAAAGCGATCGATTGGAAAAAAATTTCAGAGTCCAGCCCTCGCCGGAAGTCGAATCTCCGGCCGCCGCTGTTTCCTCTTTCCGATCAATCCTCCTTTCTTCTGTCCGTCTCTATCTCCGACCACCGATCCTCATCGGAATCTCTGAAACAGAAATTAGAAGGCATGGTTGGATTTTTTGCGATTCCGCTGGAGATTTCCGCTAGGTTACTCTGGACCACCAGCTTCTTCCGCCATAAGCGATCTTGATCATCTTTTTCTTCCTTGTTTCGAGACTACTGTTCGTGTTTTAGGTTAGTACTAAATCTGAATCTTCGCCGCCTTAGACAAGTTTTAAATTCCGTACAAATTCCACCTCTGCGCCGTCGGAATTGGAGAAAGAAGGAGGAGATTTGAATGGAATCTGGCCGGTTCTTGTTTAATCCGCCGGCTTGCGGCGGCAACATGCTTTACCTTGGCGGAGCCGGTGCCGATCCTTTTCTGCGAGGTCTATTTCTCTTCCGATCCTCTGTTTTTTTTTTTTTTTTTTTAAGTGTATTTATTTATTTTTCTTTTGAATTTGAATTATAGTAAATTATGATTCATGGTTACAAAGCTTTAAAAATGATTTTTATCAAATTCTTAACTTAAATATACATACATAGAACAAATCATAACCAGATATCTTGATAGGTAATTTCACTTTTTTTAATAAAAAAAAAAAAAAAAAAACTTGATAGGTTATTACAATTTTTTTCAATTGTGAGGTGAATAGATATTTGATTTATGAAAATTGTTGGCTCTTGAACTTGTGTTGTGAATTAGATCTTGATGTATGAAAAAAAAATAAGTATAAAATCTCGTAGAATAAAAAAATTAAAAATTTATTAGACACCTTCAAAAGTTTAGAAAGATATTTGGAAATGGGATCCTTATTAAAAATTCAAAGATTTATAACACAAGTCTTGGAGTTGAACAACAATAAATTATATGTTACTTTATATTTTGGTCTTTTGTTCGTGTGGTGCAATACTATTTTTTAATTCTCTAAAAAAAAAAAGAAAATTGTATGTCACTTTATATCTTCAACCAAAAGATTTGAAGTTCAAATCCTCGGTTCTTGATTCAAACATGCAAATAGAGTTTCAAACTTCTGATTAGAGAAGTTGTTAATGTTTGTTTTTTATTTTTTATCTTTTTTCATATTTTAACTCTTTGATTAAAAAAAAAACCTTTAAAACGATTTTTAGTCATTTCCTTAAAAAAAATGGATAATTATCACTTTGCTCTCTAATTTGTATTTAGGTTTAATTTGATCTTTGAGTTATTTAATAAAAACTTTGAGTTATTCACGTGGACGATCTTTGAAATCTTATGTCAAATTTTTAAATTAATTTTTCAATTTTCACCCAAAAAATTGAACACATGAATCAAAATTGAAAATAATAAAAAAAAAATATATATATATATATATGCGTTTCTTTTAATAAGCAGGTGGATGATTTTTTTTTTTTTTCTGCAAATTCATGAATTTTCCAAAGGAGAGATGGAGTTGACCTAAAGTTTTTGGAATCCTATGCTCCTCTCTTTGACGAATTTTTTTCAATATATAGAAATGAAATTTGTAAGTTTTGATTTGTTTATTTTAATTTATTAGCTAAAACCTCATTATAATGTTTATAATTAATTAGTGGTATAGAATTAATTTTAATTTATTAATGATGGTTAGTTAATAATTAAACTACCACATGCCTGAATTTTAGAATAGTCCAAATAATCCTATATTTTCGTGTTATTTAATAGTCACTTGTCATTTGGAAGTCGGTTTTCTTTTGTTTTGTTCTTCAACAATTGCTTTTTGATTGAGTGCTCTATGAGTGTTTTTTTTCCATGCCCTCTTCCTAGTTTAATGGATTTACATCTTAATGGAATCTTATTGTTAAAAAAAATAACATTTGAAATTTTATTTTAATGTAGAGTACTTGTTTTATTTTGCATTTCTTGTCTTGAATTTTTAATTTAATAGATGTGGGAATGGGAATTTAAACTTTCGACCTAAAGTGACTTAGCTATTTTTTTATCTTTTGAGAAATTTAAAAATTAAGGCCCAGTTTGATAACCATTTGGTTTTTTGTTTTTCGTTTTTGAAAATTAAGCTTAAAAACACTACATGCACCTACAAGTTTCTTTGTTTTGTTATCTACCTCTTTCCCATGTTTTCAAAAACCAAGTCAAATTTTGAAAACTAGAAAAAATAGTTTTCGAAAACTTGTTTTTGTTTTTGGAATTTTGCTAGGAACTCAAGTGTGTCTTTAACAAGGATGAAAATTATTGTAAGGAAATTGGATGAAAACAAAAAACCAAAAACCAAATGGTTATCAAACGGGACCTAAAAACATGAAATTTTAAATACTTGGTTTTTAAAAAAAAAATAGTTTGTATGTGAAATTTCTAATCTTTGGAAAATGATGGAACAAAAAACAAAATCTACTACCAAACATATTTCTATCTTTAAAATGATGATTTTTGGTAGGGATTCATGTTTATATAAATGTTGGATTAGCTTTAAGTGGTCTTTTTTATGGATTTTCCCTCAGACAATTAAATAAACTGATTTCTTTTTTCCAATTTTTGATGAACAATTAAGGAGGAAGAACGATGATGAGCATGAGCATGCAAGAGAGTCCAAAGGGGCGACCATTTTTTAGATCCCCCGACGATCTTTACGACGATGAATATTACGACGAGCTTTACCCTGAGAAGAAGCGTCGTCTGACCCATGACCAGGTTTGTTACATTAGCCTCCTTTACCCCGCCATGTTTGCATATTGCTCTCTCTCTCTGTGGAACAAAATTGAAGAAGTTGTGGAAAATTATTGAAGGTTCAAATGTTGGAGAAGAGCTTTGAGGAAGAGAACAAACTAGAGCCAGAGAGGAAATCCCAACTGGCTAAGAAGTTAGGCCTGCAGCCAAGGCAGGTGGCCGTATGGTTCCAAAACCGCCGTGCTCGGTGGAAGACGAAGCAGCTCGAGAGGGACTATGATGTTCTTAAAGCCTCATATGATTTGCTTATGTCAAACTATGACTCCATCGTCAAAGAGAATGCTGTGCTTAAATCTGAGGTGAATTTCATACTTAATTTTAAATGGATAGTATAATAAATAAATATTTACAATAACTCAAGAGGTCAAGAACAAAAATAGTAGAGTTCAAAAACAAAGAATAAGAGTTAGACTAGTCCAATTCTGTTATATGCATAAAAATATATACTACTTTCAGGTGGCTTCCTTAACTGAGAAATGTCTAGCCAAAGAGCTGGATGGAGGAGAAGCACCATTTCCATGTATAACATCGGAGCCCCTTCTAGCAGACACTGCCCATGTCTCCGCCCCACACTCCGGCAGAAAGGCAGAAGATCGTCTCAGTTCAGGGAGCGATAGCAGTGCAGTGATTGACGATAATTGTCCACAGCTGATCGACAGCGGTGATTCTTACTTCCCCAGCAACGAGTATCCGCAATGTGTACCTCTGCCTGCTGGGTTGCAAGTTGAACATGATGATAGGAATGACAATAGCAACTACTTGTTCTCAGACATGTTCGCAGCAACAAACCAACAGAATCAGGTGGGAGGACCTTCAGCTTGGTGGGCATGGCCTTAGGAATGTCGTTCAACTTGTTACAGCCTGTTTCTTATACAAAATGTTTGAAGGTTTTTATTTACTCACTCGTTTGTAATCAATAAAGTTTAGGTATTATGGTCATTGTTTTAAGTATCGTATTTTACTTAGTAAAATGTAAGAGACTGCTTGAAGCCTGTGTTCCCAATTAATCACTAAATAGAAATGGAAATATGTCTCAACTGTGCTTAAATCTG ATGGAATCTGGCCGGTTCTTGTTTAATCCGCCGGCTTGCGGCGGCAACATGCTTTACCTTGGCGGAGCCGGTGCCGATCCTTTTCTGCGAGGAGGAAGAACGATGATGAGCATGAGCATGCAAGAGAGTCCAAAGGGGCGACCATTTTTTAGATCCCCCGACGATCTTTACGACGATGAATATTACGACGAGCTTTACCCTGAGAAGAAGCGTCGTCTGACCCATGACCAGGTTCAAATGTTGGAGAAGAGCTTTGAGGAAGAGAACAAACTAGAGCCAGAGAGGAAATCCCAACTGGCTAAGAAGTTAGGCCTGCAGCCAAGGCAGGTGGCCGTATGGTTCCAAAACCGCCGTGCTCGGTGGAAGACGAAGCAGCTCGAGAGGGACTATGATGTTCTTAAAGCCTCATATGATTTGCTTATGTCAAACTATGACTCCATCGTCAAAGAGAATGCTGTGCTTAAATCTGAGGTGGCTTCCTTAACTGAGAAATGTCTAGCCAAAGAGCTGGATGGAGGAGAAGCACCATTTCCATGTATAACATCGGAGCCCCTTCTAGCAGACACTGCCCATGTCTCCGCCCCACACTCCGGCAGAAAGGCAGAAGATCGTCTCAGTTCAGGGAGCGATAGCAGTGCAGTGATTGACGATAATTGTCCACAGCTGATCGACAGCGGTGATTCTTACTTCCCCAGCAACGAGTATCCGCAATGTGTACCTCTGCCTGCTGGGTTGCAAGTTGAACATGATGATAGGAATGACAATAGCAACTACTTGTTCTCAGACATGTTCGCAGCAACAAACCAACAGAATCAGGTGGGAGGACCTTCAGCTTGGTGGGCATGGCCTTAG ATGGAATCTGGCCGGTTCTTGTTTAATCCGCCGGCTTGCGGCGGCAACATGCTTTACCTTGGCGGAGCCGGTGCCGATCCTTTTCTGCGAGGAGGAAGAACGATGATGAGCATGAGCATGCAAGAGAGTCCAAAGGGGCGACCATTTTTTAGATCCCCCGACGATCTTTACGACGATGAATATTACGACGAGCTTTACCCTGAGAAGAAGCGTCGTCTGACCCATGACCAGGTTCAAATGTTGGAGAAGAGCTTTGAGGAAGAGAACAAACTAGAGCCAGAGAGGAAATCCCAACTGGCTAAGAAGTTAGGCCTGCAGCCAAGGCAGGTGGCCGTATGGTTCCAAAACCGCCGTGCTCGGTGGAAGACGAAGCAGCTCGAGAGGGACTATGATGTTCTTAAAGCCTCATATGATTTGCTTATGTCAAACTATGACTCCATCGTCAAAGAGAATGCTGTGCTTAAATCTGAGGTGGCTTCCTTAACTGAGAAATGTCTAGCCAAAGAGCTGGATGGAGGAGAAGCACCATTTCCATGTATAACATCGGAGCCCCTTCTAGCAGACACTGCCCATGTCTCCGCCCCACACTCCGGCAGAAAGGCAGAAGATCGTCTCAGTTCAGGGAGCGATAGCAGTGCAGTGATTGACGATAATTGTCCACAGCTGATCGACAGCGGTGATTCTTACTTCCCCAGCAACGAGTATCCGCAATGTGTACCTCTGCCTGCTGGGTTGCAAGTTGAACATGATGATAGGAATGACAATAGCAACTACTTGTTCTCAGACATGTTCGCAGCAACAAACCAACAGAATCAGGTGGGAGGACCTTCAGCTTGGTGGGCATGGCCTTAG MESGRFLFNPPACGGNMLYLGGAGADPFLRGGRTMMSMSMQESPKGRPFFRSPDDLYDDEYYDELYPEKKRRLTHDQVQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDLLMSNYDSIVKENAVLKSEVASLTEKCLAKELDGGEAPFPCITSEPLLADTAHVSAPHSGRKAEDRLSSGSDSSAVIDDNCPQLIDSGDSYFPSNEYPQCVPLPAGLQVEHDDRNDNSNYLFSDMFAATNQQNQVGGPSAWWAWP Homology
BLAST of Spg001622 vs. NCBI nr
Match: KAG6588967.1 (Homeobox-leucine zipper protein HAT5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022735.1 Homeobox-leucine zipper protein HAT5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 513.5 bits (1321), Expect = 1.2e-141 Identity = 264/291 (90.72%), Postives = 269/291 (92.44%), Query Frame = 0
BLAST of Spg001622 vs. NCBI nr
Match: XP_038903320.1 (homeobox-leucine zipper protein HAT5-like [Benincasa hispida]) HSP 1 Score: 509.2 bits (1310), Expect = 2.3e-140 Identity = 256/283 (90.46%), Postives = 264/283 (93.29%), Query Frame = 0
BLAST of Spg001622 vs. NCBI nr
Match: XP_022928165.1 (homeobox-leucine zipper protein HAT5 isoform X1 [Cucurbita moschata]) HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-139 Identity = 262/291 (90.03%), Postives = 267/291 (91.75%), Query Frame = 0
BLAST of Spg001622 vs. NCBI nr
Match: XP_023531673.1 (homeobox-leucine zipper protein HAT5-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 503.8 bits (1296), Expect = 9.5e-139 Identity = 260/293 (88.74%), Postives = 265/293 (90.44%), Query Frame = 0
BLAST of Spg001622 vs. NCBI nr
Match: XP_022928166.1 (homeobox-leucine zipper protein HAT5 isoform X2 [Cucurbita moschata]) HSP 1 Score: 503.4 bits (1295), Expect = 1.2e-138 Identity = 262/291 (90.03%), Postives = 267/291 (91.75%), Query Frame = 0
BLAST of Spg001622 vs. ExPASy Swiss-Prot
Match: Q02283 (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=1 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 2.1e-72 Identity = 156/285 (54.74%), Postives = 193/285 (67.72%), Query Frame = 0
BLAST of Spg001622 vs. ExPASy Swiss-Prot
Match: Q6YWR4 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX16 PE=2 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 5.2e-55 Identity = 147/342 (42.98%), Postives = 189/342 (55.26%), Query Frame = 0
BLAST of Spg001622 vs. ExPASy Swiss-Prot
Match: A2X980 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=HOX16 PE=2 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 8.8e-55 Identity = 147/344 (42.73%), Postives = 189/344 (54.94%), Query Frame = 0
BLAST of Spg001622 vs. ExPASy Swiss-Prot
Match: Q9XH36 (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica OX=39946 GN=HOX5 PE=1 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 7.3e-41 Identity = 99/200 (49.50%), Postives = 129/200 (64.50%), Query Frame = 0
BLAST of Spg001622 vs. ExPASy Swiss-Prot
Match: Q6ZA74 (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX5 PE=1 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 7.3e-41 Identity = 99/200 (49.50%), Postives = 129/200 (64.50%), Query Frame = 0
BLAST of Spg001622 vs. ExPASy TrEMBL
Match: A0A6J1EQW9 (homeobox-leucine zipper protein HAT5 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435068 PE=4 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 5.4e-140 Identity = 262/291 (90.03%), Postives = 267/291 (91.75%), Query Frame = 0
BLAST of Spg001622 vs. ExPASy TrEMBL
Match: A0A6J1EJJ4 (homeobox-leucine zipper protein HAT5 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435068 PE=4 SV=1) HSP 1 Score: 503.4 bits (1295), Expect = 6.0e-139 Identity = 262/291 (90.03%), Postives = 267/291 (91.75%), Query Frame = 0
BLAST of Spg001622 vs. ExPASy TrEMBL
Match: A0A6J1F7P1 (homeobox-leucine zipper protein HAT5-like OS=Cucurbita moschata OX=3662 GN=LOC111441616 PE=4 SV=1) HSP 1 Score: 503.1 bits (1294), Expect = 7.8e-139 Identity = 248/286 (86.71%), Postives = 259/286 (90.56%), Query Frame = 0
BLAST of Spg001622 vs. ExPASy TrEMBL
Match: A0A6J1JQL9 (homeobox-leucine zipper protein HAT5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486614 PE=4 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 8.6e-138 Identity = 260/291 (89.35%), Postives = 264/291 (90.72%), Query Frame = 0
BLAST of Spg001622 vs. ExPASy TrEMBL
Match: A0A6J1J4X1 (homeobox-leucine zipper protein HAT5-like OS=Cucurbita maxima OX=3661 GN=LOC111481400 PE=4 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 2.5e-137 Identity = 244/285 (85.61%), Postives = 258/285 (90.53%), Query Frame = 0
BLAST of Spg001622 vs. TAIR 10
Match: AT3G01470.1 (homeobox 1 ) HSP 1 Score: 273.9 bits (699), Expect = 1.5e-73 Identity = 156/285 (54.74%), Postives = 193/285 (67.72%), Query Frame = 0
BLAST of Spg001622 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 ) HSP 1 Score: 127.1 bits (318), Expect = 2.2e-29 Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of Spg001622 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 ) HSP 1 Score: 127.1 bits (318), Expect = 2.2e-29 Identity = 67/113 (59.29%), Postives = 84/113 (74.34%), Query Frame = 0
BLAST of Spg001622 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 ) HSP 1 Score: 122.1 bits (305), Expect = 7.2e-28 Identity = 64/107 (59.81%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of Spg001622 vs. TAIR 10
Match: AT5G65310.2 (homeobox protein 5 ) HSP 1 Score: 122.1 bits (305), Expect = 7.2e-28 Identity = 64/107 (59.81%), Postives = 82/107 (76.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|