Homology
BLAST of Spg001231 vs. NCBI nr
Match:
XP_022140575.1 (putative pentatricopeptide repeat-containing protein At1g03510 [Momordica charantia])
HSP 1 Score: 766.5 bits (1978), Expect = 1.2e-217
Identity = 387/427 (90.63%), Postives = 405/427 (94.85%), Query Frame = 0
Query: 1 MGSYNSNYVRLLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAV 60
MGSYNSNY+RLLSYTKQLTFY NHGNHEQAL+LFHHMQASLALGLDAHVFSL LKSCTA+
Sbjct: 1 MGSYNSNYLRLLSYTKQLTFYVNHGNHEQALALFHHMQASLALGLDAHVFSLTLKSCTAI 60
Query: 61 RRPHLATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAML 120
+RPHL AIHAH AKSSLLSSPFVA ALVDMYGKC+SVSLARKLFDEIP RSVVVWNA+L
Sbjct: 61 QRPHLGIAIHAHAAKSSLLSSPFVASALVDMYGKCISVSLARKLFDEIPQRSVVVWNAIL 120
Query: 121 SLYAHSNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNL 180
SLYAH+N+L DALRLFEAMDV PNTSSFNSIIA LSELEDGFKAIAFYRKMQQ GLKPNL
Sbjct: 121 SLYAHANMLSDALRLFEAMDVQPNTSSFNSIIAGLSELEDGFKAIAFYRKMQQFGLKPNL 180
Query: 181 ITLLALLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDG 240
I+LLALLPA VG+AALDLIKQIHG+AMRSDI H QL SGLVEAYGRCGCLSYAHNVFD
Sbjct: 181 ISLLALLPACVGVAALDLIKQIHGFAMRSDISSHLQLGSGLVEAYGRCGCLSYAHNVFDS 240
Query: 241 MKERDVVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEA 300
MKERDVVAWSSLISAHALHGEARTALNIFQQMELA+V PDEITFIGVLKACSHVGLAD+A
Sbjct: 241 MKERDVVAWSSLISAHALHGEARTALNIFQQMELAEVHPDEITFIGVLKACSHVGLADKA 300
Query: 301 LAYFSRMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACR 360
L YFSRMQRDYGL+A+SDHYSCLVDVL RAGRL EA+DIIREMPVR TA+AWGALLGACR
Sbjct: 301 LDYFSRMQRDYGLKASSDHYSCLVDVLGRAGRLHEAFDIIREMPVRATAKAWGALLGACR 360
Query: 361 IYGELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGS 420
IYGELELAEIAGKALFEIEPENAANYVLLAKM+ASVGRHEEAQRMRREMKERRVKVVPGS
Sbjct: 361 IYGELELAEIAGKALFEIEPENAANYVLLAKMFASVGRHEEAQRMRREMKERRVKVVPGS 420
Query: 421 SWVVYQD 428
SWVVYQD
Sbjct: 421 SWVVYQD 427
BLAST of Spg001231 vs. NCBI nr
Match:
XP_038902010.1 (putative pentatricopeptide repeat-containing protein At1g03510 [Benincasa hispida])
HSP 1 Score: 764.2 bits (1972), Expect = 5.9e-217
Identity = 384/422 (91.00%), Postives = 403/422 (95.50%), Query Frame = 0
Query: 6 SNYVRLLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRRPHL 65
SNY+RLLSYTKQL+FYANHGNHEQALSLFHHMQ SLAL LDAHVFSLVLKSCTA+RR +L
Sbjct: 3 SNYLRLLSYTKQLSFYANHGNHEQALSLFHHMQTSLALDLDAHVFSLVLKSCTAIRRSYL 62
Query: 66 ATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAH 125
TAIHAH KSSLLSSPFVACALVDMYGK +S+SLARKLFDEIPHRSVVVWNAMLSLYAH
Sbjct: 63 GTAIHAHSVKSSLLSSPFVACALVDMYGKSLSISLARKLFDEIPHRSVVVWNAMLSLYAH 122
Query: 126 SNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLA 185
SN+LFDALRLFEA+DVPPNTSSFN IIA LS+LEDGFKAIAFYR+MQQ GLKPNLITLLA
Sbjct: 123 SNMLFDALRLFEAIDVPPNTSSFNPIIAGLSKLEDGFKAIAFYRQMQQYGLKPNLITLLA 182
Query: 186 LLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERD 245
LLP SVG+A+LDLIKQIHG+AMRSD+GC+PQLS GLVEAYGRCGCLSYAHNVFD M ERD
Sbjct: 183 LLPTSVGVASLDLIKQIHGFAMRSDMGCNPQLSCGLVEAYGRCGCLSYAHNVFDNMTERD 242
Query: 246 VVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFS 305
VVAWSSLISAHALHGEARTALNIFQQMEL +VQPDEITFIGVLKACSHVGLADEAL YFS
Sbjct: 243 VVAWSSLISAHALHGEARTALNIFQQMELGKVQPDEITFIGVLKACSHVGLADEALDYFS 302
Query: 306 RMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRIYGEL 365
RMQRDYGLQANSDHYSCLVDVLSRAGRL EAY IIREMPVR TA+AWGALLGACRIYG+L
Sbjct: 303 RMQRDYGLQANSDHYSCLVDVLSRAGRLYEAYGIIREMPVRATAKAWGALLGACRIYGDL 362
Query: 366 ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY 425
ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMK+RRVKVVPGSSWVVY
Sbjct: 363 ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKKRRVKVVPGSSWVVY 422
Query: 426 QD 428
QD
Sbjct: 423 QD 424
BLAST of Spg001231 vs. NCBI nr
Match:
XP_031743918.1 (putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis sativus] >XP_031743919.1 putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis sativus] >XP_031743920.1 putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis sativus] >XP_031743921.1 putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis sativus] >KGN46687.1 hypothetical protein Csa_020798 [Cucumis sativus])
HSP 1 Score: 760.4 bits (1962), Expect = 8.5e-216
Identity = 381/422 (90.28%), Postives = 403/422 (95.50%), Query Frame = 0
Query: 6 SNYVRLLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRRPHL 65
S+Y+RLLSYTKQL+FYANHGNHEQ LSLFHHMQASLALGLDAHVFSLVLKSCTA+RRPHL
Sbjct: 3 SSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRPHL 62
Query: 66 ATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAH 125
AIHAH AKSSLLSSPFVACALVDMYGK +SV+LARKLFDEIPHRSVVVWN MLSLY H
Sbjct: 63 GIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVH 122
Query: 126 SNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLA 185
+N+LF AL+LFEAMDVPPN SSFN+I+A LS+LEDGFKAIAFYR+MQQCGLKPNLITLLA
Sbjct: 123 ANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLA 182
Query: 186 LLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERD 245
LLPASVG+A+LDLIKQIHG+AMR+DIG H QLSSGLVEAYGRCGCLSYAHNVFD M ERD
Sbjct: 183 LLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERD 242
Query: 246 VVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFS 305
VVAWSSLISAHALHGEA TALNIFQQME +VQPDEITFIGVLKACSHVGLA+EAL YF+
Sbjct: 243 VVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYFN 302
Query: 306 RMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRIYGEL 365
RMQRDYGLQA+SDHYSCLVDVLSRAGRL EAYDIIREMPVRVTA+AWGALLGACRIYGEL
Sbjct: 303 RMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGEL 362
Query: 366 ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY 425
ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY
Sbjct: 363 ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY 422
Query: 426 QD 428
QD
Sbjct: 423 QD 424
BLAST of Spg001231 vs. NCBI nr
Match:
XP_022944604.1 (putative pentatricopeptide repeat-containing protein At1g03510 [Cucurbita moschata] >XP_022944605.1 putative pentatricopeptide repeat-containing protein At1g03510 [Cucurbita moschata])
HSP 1 Score: 756.1 bits (1951), Expect = 1.6e-214
Identity = 380/422 (90.05%), Postives = 399/422 (94.55%), Query Frame = 0
Query: 6 SNYVRLLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRRPHL 65
SNY+RLLSYTKQL+FYANHGNHEQAL+LFHHMQASLAL LDAHVFSLVLKSCTA+RRPHL
Sbjct: 3 SNYLRLLSYTKQLSFYANHGNHEQALALFHHMQASLALALDAHVFSLVLKSCTAIRRPHL 62
Query: 66 ATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAH 125
TAIHAH KSSLLSSPFVACALVDMYGK MSV LARKLFDEIPHR+VV WNAMLSLY H
Sbjct: 63 GTAIHAHATKSSLLSSPFVACALVDMYGKSMSVPLARKLFDEIPHRTVVAWNAMLSLYTH 122
Query: 126 SNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLA 185
SN+L DALRLFEAMDVPPNTSSFN IIA L L+DGFKAIAFYRKMQQCGLKPNLITLLA
Sbjct: 123 SNMLPDALRLFEAMDVPPNTSSFNPIIAGL--LDDGFKAIAFYRKMQQCGLKPNLITLLA 182
Query: 186 LLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERD 245
LLPASVG+AALDLIKQIHG+AMR+D+GCHPQLSSGLVEAYGRCGCL+YAHNVFD M ERD
Sbjct: 183 LLPASVGVAALDLIKQIHGFAMRNDLGCHPQLSSGLVEAYGRCGCLNYAHNVFDKMHERD 242
Query: 246 VVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFS 305
VVAWSSLISA+ALHGEARTALNIFQQMEL +VQPDEITFIGVLKACSHVGLADEAL YFS
Sbjct: 243 VVAWSSLISAYALHGEARTALNIFQQMELCKVQPDEITFIGVLKACSHVGLADEALDYFS 302
Query: 306 RMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRIYGEL 365
RMQRDYGLQA+SDHYSCLVD LSRAGRL EAY+IIREMPVRVTA+AWGALLGACR YGEL
Sbjct: 303 RMQRDYGLQASSDHYSCLVDALSRAGRLHEAYEIIREMPVRVTAKAWGALLGACRNYGEL 362
Query: 366 ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY 425
ELAEIAGKALF+IEPENAANYVLL KMYASVGRHEEAQR+R EMKERRVK VPGSSWVVY
Sbjct: 363 ELAEIAGKALFDIEPENAANYVLLGKMYASVGRHEEAQRLRMEMKERRVKAVPGSSWVVY 422
Query: 426 QD 428
QD
Sbjct: 423 QD 422
BLAST of Spg001231 vs. NCBI nr
Match:
KAG6570852.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 755.7 bits (1950), Expect = 2.1e-214
Identity = 380/422 (90.05%), Postives = 398/422 (94.31%), Query Frame = 0
Query: 6 SNYVRLLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRRPHL 65
SNY+RLLSYTKQL+FYANHGNHEQAL+LFHHMQASLAL LDAHVFSLVLKSCTA+RRP L
Sbjct: 3 SNYLRLLSYTKQLSFYANHGNHEQALALFHHMQASLALALDAHVFSLVLKSCTAIRRPQL 62
Query: 66 ATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAH 125
TAIHAH KSSLLSSPFVACALVDMYGK MSVSLARKLFDEIPHR+VV WNAMLSLY H
Sbjct: 63 GTAIHAHATKSSLLSSPFVACALVDMYGKSMSVSLARKLFDEIPHRTVVAWNAMLSLYTH 122
Query: 126 SNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLA 185
SN+L DALRLFEAMDVPPNTSSFN IIA L L+DGFKAIAFYRKMQQCGLKPNLITLLA
Sbjct: 123 SNMLPDALRLFEAMDVPPNTSSFNPIIAGL--LDDGFKAIAFYRKMQQCGLKPNLITLLA 182
Query: 186 LLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERD 245
LLPASVG+AALDLIKQIHG+AMR+D+GCHPQL SGLVEAYGRCGCL+YAHNVFD M ERD
Sbjct: 183 LLPASVGVAALDLIKQIHGFAMRNDLGCHPQLGSGLVEAYGRCGCLNYAHNVFDKMHERD 242
Query: 246 VVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFS 305
VVAWSSLISAHALHGEARTALNIFQQMEL +VQPDEITFIGVLKACSHVGLADEAL YFS
Sbjct: 243 VVAWSSLISAHALHGEARTALNIFQQMELCKVQPDEITFIGVLKACSHVGLADEALDYFS 302
Query: 306 RMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRIYGEL 365
RMQRDYGLQA+SDHYSCLVD LSRAGRL EAY+IIREMPVRVTA+AWGALLGACR YGEL
Sbjct: 303 RMQRDYGLQASSDHYSCLVDALSRAGRLHEAYEIIREMPVRVTAKAWGALLGACRNYGEL 362
Query: 366 ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY 425
ELAEIAGKALF+IEPENAANYVLL KMYASVGRHEEAQR+R EMKERRVK VPGSSWVVY
Sbjct: 363 ELAEIAGKALFDIEPENAANYVLLGKMYASVGRHEEAQRLRMEMKERRVKAVPGSSWVVY 422
Query: 426 QD 428
QD
Sbjct: 423 QD 422
BLAST of Spg001231 vs. ExPASy Swiss-Prot
Match:
Q9LR72 (Putative pentatricopeptide repeat-containing protein At1g03510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E3 PE=3 SV=1)
HSP 1 Score: 543.9 bits (1400), Expect = 1.6e-153
Identity = 277/426 (65.02%), Postives = 330/426 (77.46%), Query Frame = 0
Query: 3 SYNSNYVRLLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRR 62
SY S+ +L+S TKQL+ YAN GNHEQAL+LF M +S AL LDAHVFSL LKSC A R
Sbjct: 4 SYASSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFR 63
Query: 63 PHLATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSL 122
P L ++HAH KS+ LS+PFV CAL+DMYGKC+SVS ARKLFDEIP R+ VVWNAM+S
Sbjct: 64 PVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISH 123
Query: 123 YAHSNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDG-FKAIAFYRKMQQCGLKPNLI 182
Y H + +A+ L+EAMDV PN SSFN+II L EDG ++AI FYRKM + KPNLI
Sbjct: 124 YTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLI 183
Query: 183 TLLALLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGM 242
TLLAL+ A + A LIK+IH YA R+ I HPQL SGLVEAYGRCG + Y VFD M
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM 243
Query: 243 KERDVVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEAL 302
++RDVVAWSSLISA+ALHG+A +AL FQ+MELA+V PD+I F+ VLKACSH GLADEAL
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEAL 303
Query: 303 AYFSRMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRI 362
YF RMQ DYGL+A+ DHYSCLVDVLSR GR +EAY +I+ MP + TA+ WGALLGACR
Sbjct: 304 VYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRN 363
Query: 363 YGELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSS 422
YGE+ELAEIA + L +EPEN ANYVLL K+Y SVGR EEA+R+R +MKE VKV PGSS
Sbjct: 364 YGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Query: 423 WVVYQD 428
W +++D
Sbjct: 424 WCLFKD 429
BLAST of Spg001231 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 278.5 bits (711), Expect = 1.3e-73
Identity = 142/378 (37.57%), Postives = 232/378 (61.38%), Query Frame = 0
Query: 46 DAHVFSLVLKSCTAVRRPHLATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLF 105
D F + KSC ++ +L +H H+ K AL+DMY K + A K+F
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVF 167
Query: 106 DEIPHRSVVVWNAMLSLYAHSNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDGFKAI 165
DE+ R V+ WN++LS YA + A LF M + S+ ++I+ + + +A+
Sbjct: 168 DEMYERDVISWNSLLSGYARLGQMKKAKGLFHLM-LDKTIVSWTAMISGYTGIGCYVEAM 227
Query: 166 AFYRKMQQCGLKPNLITLLALLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAY 225
F+R+MQ G++P+ I+L+++LP+ + +L+L K IH YA R + + L+E Y
Sbjct: 228 DFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMY 287
Query: 226 GRCGCLSYAHNVFDGMKERDVVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFI 285
+CG +S A +F M+ +DV++WS++IS +A HG A A+ F +M+ A+V+P+ ITF+
Sbjct: 288 SKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFL 347
Query: 286 GVLKACSHVGLADEALAYFSRMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPV 345
G+L ACSHVG+ E L YF M++DY ++ +HY CL+DVL+RAG+L+ A +I + MP+
Sbjct: 348 GLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPM 407
Query: 346 RVTARAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRM 405
+ ++ WG+LL +CR G L++A +A L E+EPE+ NYVLLA +YA +G+ E+ R+
Sbjct: 408 KPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRL 467
Query: 406 RREMKERRVKVVPGSSWV 424
R+ ++ +K PG S +
Sbjct: 468 RKMIRNENMKKTPGGSLI 484
BLAST of Spg001231 vs. ExPASy Swiss-Prot
Match:
Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 272.7 bits (696), Expect = 7.0e-72
Identity = 148/408 (36.27%), Postives = 237/408 (58.09%), Query Frame = 0
Query: 21 YANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRRPHLATAIHAHVAKSSLLS 80
Y+ + + ++AL LF M+ S L ++ + V+ +C AIH V K L
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 438
Query: 81 SPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAHSNLLFDALRLFEAMD 140
FV L+DMY + + +A ++F ++ R +V WN M++ Y S DAL L M
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM- 498
Query: 141 VPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLALLPASVGMAALDLIK 200
++ ++S + + LKPN ITL+ +LP+ ++AL K
Sbjct: 499 --------QNLERKVS------------KGASRVSLKPNSITLMTILPSCAALSALAKGK 558
Query: 201 QIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERDVVAWSSLISAHALHG 260
+IH YA+++++ + S LV+ Y +CGCL + VFD + +++V+ W+ +I A+ +HG
Sbjct: 559 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 618
Query: 261 EARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFSRMQRDYGLQANSDHY 320
+ A+++ + M + V+P+E+TFI V ACSH G+ DE L F M+ DYG++ +SDHY
Sbjct: 619 NGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY 678
Query: 321 SCLVDVLSRAGRLKEAYDIIREMPVRVT-ARAWGALLGACRIYGELELAEIAGKALFEIE 380
+C+VD+L RAGR+KEAY ++ MP A AW +LLGA RI+ LE+ EIA + L ++E
Sbjct: 679 ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE 738
Query: 381 PENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQD 428
P A++YVLLA +Y+S G ++A +RR MKE+ V+ PG SW+ + D
Sbjct: 739 PNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765
BLAST of Spg001231 vs. ExPASy Swiss-Prot
Match:
Q9LNU6 (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2)
HSP 1 Score: 268.5 bits (685), Expect = 1.3e-70
Identity = 146/416 (35.10%), Postives = 241/416 (57.93%), Query Frame = 0
Query: 11 LLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRRPHLATAIH 70
++S+ L+ + G H++A+ +F + L D S VL S ++ IH
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIH-HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 276
Query: 71 AHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAHSNLLF 130
+V K LL V A++DMYGK V LF++ V NA ++ + + L+
Sbjct: 277 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 336
Query: 131 DALRLFE---AMDVPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLALL 190
AL +FE + N S+ SIIA ++ +A+ +R+MQ G+KPN +T+ ++L
Sbjct: 337 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 396
Query: 191 PASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERDVV 250
PA +AAL + HG+A+R + + + S L++ Y +CG ++ + VF+ M +++V
Sbjct: 397 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 456
Query: 251 AWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFSRM 310
W+SL++ ++HG+A+ ++IF+ + +++PD I+F +L AC VGL DE YF M
Sbjct: 457 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 516
Query: 311 QRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRIYGELEL 370
+YG++ +HYSC+V++L RAG+L+EAYD+I+EMP + WGALL +CR+ ++L
Sbjct: 517 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 576
Query: 371 AEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 424
AEIA + LF +EPEN YVLL+ +YA+ G E +R +M+ +K PG SW+
Sbjct: 577 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
BLAST of Spg001231 vs. ExPASy Swiss-Prot
Match:
Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)
HSP 1 Score: 266.5 bits (680), Expect = 5.0e-70
Identity = 148/403 (36.72%), Postives = 225/403 (55.83%), Query Frame = 0
Query: 25 GNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTA----VRRPHLATAIHAHVAKSSLLS 84
G+ E+ L L+ M + + D ++ VLK+C A V IHAH+ + S
Sbjct: 157 GHGEEVLGLYWKMN-RIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 216
Query: 85 SPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAHSNLLFDALRLFEAMD 144
++ LVDMY + V A +F +P R+VV W+AM++ YA + F+ALR F M
Sbjct: 217 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM- 276
Query: 145 VPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLALLPASVGMAALDLIK 204
+ E +D PN +T++++L A +AAL+ K
Sbjct: 277 --------------MRETKDS---------------SPNSVTMVSVLQACASLAALEQGK 336
Query: 205 QIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERDVVAWSSLISAHALHG 264
IHGY +R + + S LV YGRCG L VFD M +RDVV+W+SLIS++ +HG
Sbjct: 337 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 396
Query: 265 EARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFSRMQRDYGLQANSDHY 324
+ A+ IF++M P +TF+ VL ACSH GL +E F M RD+G++ +HY
Sbjct: 397 YGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHY 456
Query: 325 SCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRIYGELELAEIAGKALFEIEP 384
+C+VD+L RA RL EA ++++M + WG+LLG+CRI+G +ELAE A + LF +EP
Sbjct: 457 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP 516
Query: 385 ENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 424
+NA NYVLLA +YA +E +R+++ ++ R ++ +PG W+
Sbjct: 517 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWM 528
BLAST of Spg001231 vs. ExPASy TrEMBL
Match:
A0A6J1CFE4 (putative pentatricopeptide repeat-containing protein At1g03510 OS=Momordica charantia OX=3673 GN=LOC111011197 PE=4 SV=1)
HSP 1 Score: 766.5 bits (1978), Expect = 5.7e-218
Identity = 387/427 (90.63%), Postives = 405/427 (94.85%), Query Frame = 0
Query: 1 MGSYNSNYVRLLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAV 60
MGSYNSNY+RLLSYTKQLTFY NHGNHEQAL+LFHHMQASLALGLDAHVFSL LKSCTA+
Sbjct: 1 MGSYNSNYLRLLSYTKQLTFYVNHGNHEQALALFHHMQASLALGLDAHVFSLTLKSCTAI 60
Query: 61 RRPHLATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAML 120
+RPHL AIHAH AKSSLLSSPFVA ALVDMYGKC+SVSLARKLFDEIP RSVVVWNA+L
Sbjct: 61 QRPHLGIAIHAHAAKSSLLSSPFVASALVDMYGKCISVSLARKLFDEIPQRSVVVWNAIL 120
Query: 121 SLYAHSNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNL 180
SLYAH+N+L DALRLFEAMDV PNTSSFNSIIA LSELEDGFKAIAFYRKMQQ GLKPNL
Sbjct: 121 SLYAHANMLSDALRLFEAMDVQPNTSSFNSIIAGLSELEDGFKAIAFYRKMQQFGLKPNL 180
Query: 181 ITLLALLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDG 240
I+LLALLPA VG+AALDLIKQIHG+AMRSDI H QL SGLVEAYGRCGCLSYAHNVFD
Sbjct: 181 ISLLALLPACVGVAALDLIKQIHGFAMRSDISSHLQLGSGLVEAYGRCGCLSYAHNVFDS 240
Query: 241 MKERDVVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEA 300
MKERDVVAWSSLISAHALHGEARTALNIFQQMELA+V PDEITFIGVLKACSHVGLAD+A
Sbjct: 241 MKERDVVAWSSLISAHALHGEARTALNIFQQMELAEVHPDEITFIGVLKACSHVGLADKA 300
Query: 301 LAYFSRMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACR 360
L YFSRMQRDYGL+A+SDHYSCLVDVL RAGRL EA+DIIREMPVR TA+AWGALLGACR
Sbjct: 301 LDYFSRMQRDYGLKASSDHYSCLVDVLGRAGRLHEAFDIIREMPVRATAKAWGALLGACR 360
Query: 361 IYGELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGS 420
IYGELELAEIAGKALFEIEPENAANYVLLAKM+ASVGRHEEAQRMRREMKERRVKVVPGS
Sbjct: 361 IYGELELAEIAGKALFEIEPENAANYVLLAKMFASVGRHEEAQRMRREMKERRVKVVPGS 420
Query: 421 SWVVYQD 428
SWVVYQD
Sbjct: 421 SWVVYQD 427
BLAST of Spg001231 vs. ExPASy TrEMBL
Match:
A0A0A0KE48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124020 PE=4 SV=1)
HSP 1 Score: 760.4 bits (1962), Expect = 4.1e-216
Identity = 381/422 (90.28%), Postives = 403/422 (95.50%), Query Frame = 0
Query: 6 SNYVRLLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRRPHL 65
S+Y+RLLSYTKQL+FYANHGNHEQ LSLFHHMQASLALGLDAHVFSLVLKSCTA+RRPHL
Sbjct: 3 SSYLRLLSYTKQLSFYANHGNHEQTLSLFHHMQASLALGLDAHVFSLVLKSCTALRRPHL 62
Query: 66 ATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAH 125
AIHAH AKSSLLSSPFVACALVDMYGK +SV+LARKLFDEIPHRSVVVWN MLSLY H
Sbjct: 63 GIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVTLARKLFDEIPHRSVVVWNVMLSLYVH 122
Query: 126 SNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLA 185
+N+LF AL+LFEAMDVPPN SSFN+I+A LS+LEDGFKAIAFYR+MQQCGLKPNLITLLA
Sbjct: 123 ANMLFGALQLFEAMDVPPNASSFNAIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLA 182
Query: 186 LLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERD 245
LLPASVG+A+LDLIKQIHG+AMR+DIG H QLSSGLVEAYGRCGCLSYAHNVFD M ERD
Sbjct: 183 LLPASVGVASLDLIKQIHGFAMRNDIGAHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERD 242
Query: 246 VVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFS 305
VVAWSSLISAHALHGEA TALNIFQQME +VQPDEITFIGVLKACSHVGLA+EAL YF+
Sbjct: 243 VVAWSSLISAHALHGEASTALNIFQQMESCKVQPDEITFIGVLKACSHVGLANEALDYFN 302
Query: 306 RMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRIYGEL 365
RMQRDYGLQA+SDHYSCLVDVLSRAGRL EAYDIIREMPVRVTA+AWGALLGACRIYGEL
Sbjct: 303 RMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGALLGACRIYGEL 362
Query: 366 ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY 425
ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY
Sbjct: 363 ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY 422
Query: 426 QD 428
QD
Sbjct: 423 QD 424
BLAST of Spg001231 vs. ExPASy TrEMBL
Match:
A0A6J1FYR9 (putative pentatricopeptide repeat-containing protein At1g03510 OS=Cucurbita moschata OX=3662 GN=LOC111449013 PE=4 SV=1)
HSP 1 Score: 756.1 bits (1951), Expect = 7.7e-215
Identity = 380/422 (90.05%), Postives = 399/422 (94.55%), Query Frame = 0
Query: 6 SNYVRLLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRRPHL 65
SNY+RLLSYTKQL+FYANHGNHEQAL+LFHHMQASLAL LDAHVFSLVLKSCTA+RRPHL
Sbjct: 3 SNYLRLLSYTKQLSFYANHGNHEQALALFHHMQASLALALDAHVFSLVLKSCTAIRRPHL 62
Query: 66 ATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAH 125
TAIHAH KSSLLSSPFVACALVDMYGK MSV LARKLFDEIPHR+VV WNAMLSLY H
Sbjct: 63 GTAIHAHATKSSLLSSPFVACALVDMYGKSMSVPLARKLFDEIPHRTVVAWNAMLSLYTH 122
Query: 126 SNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLA 185
SN+L DALRLFEAMDVPPNTSSFN IIA L L+DGFKAIAFYRKMQQCGLKPNLITLLA
Sbjct: 123 SNMLPDALRLFEAMDVPPNTSSFNPIIAGL--LDDGFKAIAFYRKMQQCGLKPNLITLLA 182
Query: 186 LLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERD 245
LLPASVG+AALDLIKQIHG+AMR+D+GCHPQLSSGLVEAYGRCGCL+YAHNVFD M ERD
Sbjct: 183 LLPASVGVAALDLIKQIHGFAMRNDLGCHPQLSSGLVEAYGRCGCLNYAHNVFDKMHERD 242
Query: 246 VVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFS 305
VVAWSSLISA+ALHGEARTALNIFQQMEL +VQPDEITFIGVLKACSHVGLADEAL YFS
Sbjct: 243 VVAWSSLISAYALHGEARTALNIFQQMELCKVQPDEITFIGVLKACSHVGLADEALDYFS 302
Query: 306 RMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRIYGEL 365
RMQRDYGLQA+SDHYSCLVD LSRAGRL EAY+IIREMPVRVTA+AWGALLGACR YGEL
Sbjct: 303 RMQRDYGLQASSDHYSCLVDALSRAGRLHEAYEIIREMPVRVTAKAWGALLGACRNYGEL 362
Query: 366 ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY 425
ELAEIAGKALF+IEPENAANYVLL KMYASVGRHEEAQR+R EMKERRVK VPGSSWVVY
Sbjct: 363 ELAEIAGKALFDIEPENAANYVLLGKMYASVGRHEEAQRLRMEMKERRVKAVPGSSWVVY 422
Query: 426 QD 428
QD
Sbjct: 423 QD 422
BLAST of Spg001231 vs. ExPASy TrEMBL
Match:
A0A1S4DX62 (putative pentatricopeptide repeat-containing protein At1g03510 OS=Cucumis melo OX=3656 GN=LOC103490472 PE=4 SV=1)
HSP 1 Score: 751.9 bits (1940), Expect = 1.5e-213
Identity = 378/422 (89.57%), Postives = 401/422 (95.02%), Query Frame = 0
Query: 6 SNYVRLLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRRPHL 65
S+Y+RL+SY+KQL+FYA HG+HEQ LSLFHHMQASLAL LDAHVFSLVLKSCTA+RRPHL
Sbjct: 3 SSYLRLVSYSKQLSFYAKHGSHEQTLSLFHHMQASLALALDAHVFSLVLKSCTALRRPHL 62
Query: 66 ATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAH 125
AIHAH AKSSLLSSPFVACALVDMYGK +SVSLARKLFDEIPHRSVVVWN MLSLY H
Sbjct: 63 GIAIHAHSAKSSLLSSPFVACALVDMYGKSLSVSLARKLFDEIPHRSVVVWNVMLSLYVH 122
Query: 126 SNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLA 185
SN+LF AL+LFEAMDVPPN SSFN I+A LS+LEDGFKAIAFYR+MQQCGLKPNLITLLA
Sbjct: 123 SNMLFGALQLFEAMDVPPNASSFNPIVAGLSKLEDGFKAIAFYRQMQQCGLKPNLITLLA 182
Query: 186 LLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERD 245
LLPASVG+A+LDLIKQIHG+AMR+DIG H QLSSGLVEAYGRCGCLSYAHNVFD M ERD
Sbjct: 183 LLPASVGVASLDLIKQIHGFAMRNDIGGHLQLSSGLVEAYGRCGCLSYAHNVFDNMTERD 242
Query: 246 VVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFS 305
VVAWSSLISAHALHGEA TALNIFQQMEL++VQPD ITFIGVLKACSHVGLADEAL YF+
Sbjct: 243 VVAWSSLISAHALHGEASTALNIFQQMELSKVQPDAITFIGVLKACSHVGLADEALDYFN 302
Query: 306 RMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRIYGEL 365
RMQRDYGLQA+SDHYSCLVDVLSRAGRL EA+DIIREMPVRVTA+AWGALLGACRIYGEL
Sbjct: 303 RMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGALLGACRIYGEL 362
Query: 366 ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY 425
ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY
Sbjct: 363 ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY 422
Query: 426 QD 428
QD
Sbjct: 423 QD 424
BLAST of Spg001231 vs. ExPASy TrEMBL
Match:
A0A6J1J925 (putative pentatricopeptide repeat-containing protein At1g03510 OS=Cucurbita maxima OX=3661 GN=LOC111484567 PE=4 SV=1)
HSP 1 Score: 736.9 bits (1901), Expect = 4.9e-209
Identity = 372/422 (88.15%), Postives = 394/422 (93.36%), Query Frame = 0
Query: 6 SNYVRLLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRRPHL 65
SNY+RLLSYTKQL+FYANHGNHEQAL+LF HMQASLAL LDAHVFSLVLKSCTA+RRP L
Sbjct: 3 SNYLRLLSYTKQLSFYANHGNHEQALALFLHMQASLALALDAHVFSLVLKSCTAIRRPLL 62
Query: 66 ATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAH 125
TAIHAH KSSLLS+PFVACALVDMYGK MSV LARKLFDEIP R+VV WN MLSLY H
Sbjct: 63 GTAIHAHATKSSLLSNPFVACALVDMYGKSMSVPLARKLFDEIPQRTVVAWNTMLSLYTH 122
Query: 126 SNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLA 185
SN+L DALRLFEAMDVPPNTSSFN IIA L L+DGFKAI+FYRKMQQCGLKPNLITLLA
Sbjct: 123 SNMLPDALRLFEAMDVPPNTSSFNPIIAGL--LDDGFKAISFYRKMQQCGLKPNLITLLA 182
Query: 186 LLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERD 245
LLPASVG+AALDLIKQIHG+AMR+D+GCHPQLSSGLVEAYGRCGCL+YAHNVFD M ERD
Sbjct: 183 LLPASVGVAALDLIKQIHGFAMRNDLGCHPQLSSGLVEAYGRCGCLNYAHNVFDKMHERD 242
Query: 246 VVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFS 305
VVAWSSLISAHALHGEARTALNIFQQM L +VQPDEITFIGVLKACS+VGLADEAL YFS
Sbjct: 243 VVAWSSLISAHALHGEARTALNIFQQMALCKVQPDEITFIGVLKACSYVGLADEALYYFS 302
Query: 306 RMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRIYGEL 365
RMQRDYGLQA+SDHYSCLVD LSRAGRL EAY+IIREMPVRVTA+AWGALLGACR YGEL
Sbjct: 303 RMQRDYGLQASSDHYSCLVDALSRAGRLHEAYEIIREMPVRVTAKAWGALLGACRNYGEL 362
Query: 366 ELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVY 425
ELAEIAGKALF+IEPENAANYVLL KMYASVGRHEEAQR+R EMKERRV+ VPGSSWVVY
Sbjct: 363 ELAEIAGKALFDIEPENAANYVLLGKMYASVGRHEEAQRLRMEMKERRVQAVPGSSWVVY 422
Query: 426 QD 428
QD
Sbjct: 423 QD 422
BLAST of Spg001231 vs. TAIR 10
Match:
AT1G03510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 543.9 bits (1400), Expect = 1.2e-154
Identity = 277/426 (65.02%), Postives = 330/426 (77.46%), Query Frame = 0
Query: 3 SYNSNYVRLLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRR 62
SY S+ +L+S TKQL+ YAN GNHEQAL+LF M +S AL LDAHVFSL LKSC A R
Sbjct: 4 SYASSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFR 63
Query: 63 PHLATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSL 122
P L ++HAH KS+ LS+PFV CAL+DMYGKC+SVS ARKLFDEIP R+ VVWNAM+S
Sbjct: 64 PVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISH 123
Query: 123 YAHSNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDG-FKAIAFYRKMQQCGLKPNLI 182
Y H + +A+ L+EAMDV PN SSFN+II L EDG ++AI FYRKM + KPNLI
Sbjct: 124 YTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLI 183
Query: 183 TLLALLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGM 242
TLLAL+ A + A LIK+IH YA R+ I HPQL SGLVEAYGRCG + Y VFD M
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM 243
Query: 243 KERDVVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEAL 302
++RDVVAWSSLISA+ALHG+A +AL FQ+MELA+V PD+I F+ VLKACSH GLADEAL
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEAL 303
Query: 303 AYFSRMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRI 362
YF RMQ DYGL+A+ DHYSCLVDVLSR GR +EAY +I+ MP + TA+ WGALLGACR
Sbjct: 304 VYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRN 363
Query: 363 YGELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSS 422
YGE+ELAEIA + L +EPEN ANYVLL K+Y SVGR EEA+R+R +MKE VKV PGSS
Sbjct: 364 YGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Query: 423 WVVYQD 428
W +++D
Sbjct: 424 WCLFKD 429
BLAST of Spg001231 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 278.5 bits (711), Expect = 9.1e-75
Identity = 142/378 (37.57%), Postives = 232/378 (61.38%), Query Frame = 0
Query: 46 DAHVFSLVLKSCTAVRRPHLATAIHAHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLF 105
D F + KSC ++ +L +H H+ K AL+DMY K + A K+F
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVF 167
Query: 106 DEIPHRSVVVWNAMLSLYAHSNLLFDALRLFEAMDVPPNTSSFNSIIARLSELEDGFKAI 165
DE+ R V+ WN++LS YA + A LF M + S+ ++I+ + + +A+
Sbjct: 168 DEMYERDVISWNSLLSGYARLGQMKKAKGLFHLM-LDKTIVSWTAMISGYTGIGCYVEAM 227
Query: 166 AFYRKMQQCGLKPNLITLLALLPASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAY 225
F+R+MQ G++P+ I+L+++LP+ + +L+L K IH YA R + + L+E Y
Sbjct: 228 DFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMY 287
Query: 226 GRCGCLSYAHNVFDGMKERDVVAWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFI 285
+CG +S A +F M+ +DV++WS++IS +A HG A A+ F +M+ A+V+P+ ITF+
Sbjct: 288 SKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFL 347
Query: 286 GVLKACSHVGLADEALAYFSRMQRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPV 345
G+L ACSHVG+ E L YF M++DY ++ +HY CL+DVL+RAG+L+ A +I + MP+
Sbjct: 348 GLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPM 407
Query: 346 RVTARAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRM 405
+ ++ WG+LL +CR G L++A +A L E+EPE+ NYVLLA +YA +G+ E+ R+
Sbjct: 408 KPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRL 467
Query: 406 RREMKERRVKVVPGSSWV 424
R+ ++ +K PG S +
Sbjct: 468 RKMIRNENMKKTPGGSLI 484
BLAST of Spg001231 vs. TAIR 10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 272.7 bits (696), Expect = 5.0e-73
Identity = 148/408 (36.27%), Postives = 237/408 (58.09%), Query Frame = 0
Query: 21 YANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRRPHLATAIHAHVAKSSLLS 80
Y+ + + ++AL LF M+ S L ++ + V+ +C AIH V K L
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 438
Query: 81 SPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAHSNLLFDALRLFEAMD 140
FV L+DMY + + +A ++F ++ R +V WN M++ Y S DAL L M
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM- 498
Query: 141 VPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLALLPASVGMAALDLIK 200
++ ++S + + LKPN ITL+ +LP+ ++AL K
Sbjct: 499 --------QNLERKVS------------KGASRVSLKPNSITLMTILPSCAALSALAKGK 558
Query: 201 QIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERDVVAWSSLISAHALHG 260
+IH YA+++++ + S LV+ Y +CGCL + VFD + +++V+ W+ +I A+ +HG
Sbjct: 559 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 618
Query: 261 EARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFSRMQRDYGLQANSDHY 320
+ A+++ + M + V+P+E+TFI V ACSH G+ DE L F M+ DYG++ +SDHY
Sbjct: 619 NGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY 678
Query: 321 SCLVDVLSRAGRLKEAYDIIREMPVRVT-ARAWGALLGACRIYGELELAEIAGKALFEIE 380
+C+VD+L RAGR+KEAY ++ MP A AW +LLGA RI+ LE+ EIA + L ++E
Sbjct: 679 ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE 738
Query: 381 PENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQD 428
P A++YVLLA +Y+S G ++A +RR MKE+ V+ PG SW+ + D
Sbjct: 739 PNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765
BLAST of Spg001231 vs. TAIR 10
Match:
AT1G20230.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 268.5 bits (685), Expect = 9.4e-72
Identity = 146/416 (35.10%), Postives = 241/416 (57.93%), Query Frame = 0
Query: 11 LLSYTKQLTFYANHGNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTAVRRPHLATAIH 70
++S+ L+ + G H++A+ +F + L D S VL S ++ IH
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIH-HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 276
Query: 71 AHVAKSSLLSSPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAHSNLLF 130
+V K LL V A++DMYGK V LF++ V NA ++ + + L+
Sbjct: 277 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 336
Query: 131 DALRLFE---AMDVPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLALL 190
AL +FE + N S+ SIIA ++ +A+ +R+MQ G+KPN +T+ ++L
Sbjct: 337 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 396
Query: 191 PASVGMAALDLIKQIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERDVV 250
PA +AAL + HG+A+R + + + S L++ Y +CG ++ + VF+ M +++V
Sbjct: 397 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 456
Query: 251 AWSSLISAHALHGEARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFSRM 310
W+SL++ ++HG+A+ ++IF+ + +++PD I+F +L AC VGL DE YF M
Sbjct: 457 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 516
Query: 311 QRDYGLQANSDHYSCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRIYGELEL 370
+YG++ +HYSC+V++L RAG+L+EAYD+I+EMP + WGALL +CR+ ++L
Sbjct: 517 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 576
Query: 371 AEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 424
AEIA + LF +EPEN YVLL+ +YA+ G E +R +M+ +K PG SW+
Sbjct: 577 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
BLAST of Spg001231 vs. TAIR 10
Match:
AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 266.5 bits (680), Expect = 3.6e-71
Identity = 148/403 (36.72%), Postives = 225/403 (55.83%), Query Frame = 0
Query: 25 GNHEQALSLFHHMQASLALGLDAHVFSLVLKSCTA----VRRPHLATAIHAHVAKSSLLS 84
G+ E+ L L+ M + + D ++ VLK+C A V IHAH+ + S
Sbjct: 157 GHGEEVLGLYWKMN-RIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 216
Query: 85 SPFVACALVDMYGKCMSVSLARKLFDEIPHRSVVVWNAMLSLYAHSNLLFDALRLFEAMD 144
++ LVDMY + V A +F +P R+VV W+AM++ YA + F+ALR F M
Sbjct: 217 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM- 276
Query: 145 VPPNTSSFNSIIARLSELEDGFKAIAFYRKMQQCGLKPNLITLLALLPASVGMAALDLIK 204
+ E +D PN +T++++L A +AAL+ K
Sbjct: 277 --------------MRETKDS---------------SPNSVTMVSVLQACASLAALEQGK 336
Query: 205 QIHGYAMRSDIGCHPQLSSGLVEAYGRCGCLSYAHNVFDGMKERDVVAWSSLISAHALHG 264
IHGY +R + + S LV YGRCG L VFD M +RDVV+W+SLIS++ +HG
Sbjct: 337 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 396
Query: 265 EARTALNIFQQMELAQVQPDEITFIGVLKACSHVGLADEALAYFSRMQRDYGLQANSDHY 324
+ A+ IF++M P +TF+ VL ACSH GL +E F M RD+G++ +HY
Sbjct: 397 YGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHY 456
Query: 325 SCLVDVLSRAGRLKEAYDIIREMPVRVTARAWGALLGACRIYGELELAEIAGKALFEIEP 384
+C+VD+L RA RL EA ++++M + WG+LLG+CRI+G +ELAE A + LF +EP
Sbjct: 457 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP 516
Query: 385 ENAANYVLLAKMYASVGRHEEAQRMRREMKERRVKVVPGSSWV 424
+NA NYVLLA +YA +E +R+++ ++ R ++ +PG W+
Sbjct: 517 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWM 528
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022140575.1 | 1.2e-217 | 90.63 | putative pentatricopeptide repeat-containing protein At1g03510 [Momordica charan... | [more] |
XP_038902010.1 | 5.9e-217 | 91.00 | putative pentatricopeptide repeat-containing protein At1g03510 [Benincasa hispid... | [more] |
XP_031743918.1 | 8.5e-216 | 90.28 | putative pentatricopeptide repeat-containing protein At1g03510 [Cucumis sativus]... | [more] |
XP_022944604.1 | 1.6e-214 | 90.05 | putative pentatricopeptide repeat-containing protein At1g03510 [Cucurbita moscha... | [more] |
KAG6570852.1 | 2.1e-214 | 90.05 | putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... | [more] |
Match Name | E-value | Identity | Description | |
Q9LR72 | 1.6e-153 | 65.02 | Putative pentatricopeptide repeat-containing protein At1g03510 OS=Arabidopsis th... | [more] |
Q9SIL5 | 1.3e-73 | 37.57 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
Q7Y211 | 7.0e-72 | 36.27 | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... | [more] |
Q9LNU6 | 1.3e-70 | 35.10 | Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX... | [more] |
Q9STF3 | 5.0e-70 | 36.72 | Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CFE4 | 5.7e-218 | 90.63 | putative pentatricopeptide repeat-containing protein At1g03510 OS=Momordica char... | [more] |
A0A0A0KE48 | 4.1e-216 | 90.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124020 PE=4 SV=1 | [more] |
A0A6J1FYR9 | 7.7e-215 | 90.05 | putative pentatricopeptide repeat-containing protein At1g03510 OS=Cucurbita mosc... | [more] |
A0A1S4DX62 | 1.5e-213 | 89.57 | putative pentatricopeptide repeat-containing protein At1g03510 OS=Cucumis melo O... | [more] |
A0A6J1J925 | 4.9e-209 | 88.15 | putative pentatricopeptide repeat-containing protein At1g03510 OS=Cucurbita maxi... | [more] |
Match Name | E-value | Identity | Description | |
AT1G03510.1 | 1.2e-154 | 65.02 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G20540.1 | 9.1e-75 | 37.57 | mitochondrial editing factor 21 | [more] |
AT3G57430.1 | 5.0e-73 | 36.27 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G20230.1 | 9.4e-72 | 35.10 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G46790.1 | 3.6e-71 | 36.72 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |