Spg001182 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGACAATAAGGAAGGCGGGATAGTCAAAACCGGCCACGACGACGGCCTCGAGCTGGCAGTTTCTCTCCTGAAGGAGTTCGAGCTGCCGGAGGGGCTGCTCCCGCTGGCCGACGTGGTGGAGGTCGGGTACGTGAAGGAGACTGGGTACGTGTGGATCGTGCAGAGGAAGAAGGTGGAGCACGAGTTCAAAATGGTGAGCAAGTTGGTGAGCTACGACACCGAGATCACCGGGTTTATGTTGAAGAAGAGAATCAAGAAGCTCAAGGGCGTCAAGGCCAAGGAGTTCTTGCTCTGGCCGCCGGTTAATGATATCTACGTCGACGACCCGCCCACCGGCAAGATTCACTTCAAGAGCCTCGCCGGTGTCACCAAGACTTTCCCTGTCCAGGCCTTCGCCGCCGGCCAGTGA ATGGCGGACAATAAGGAAGGCGGGATAGTCAAAACCGGCCACGACGACGGCCTCGAGCTGGCAGTTTCTCTCCTGAAGGAGTTCGAGCTGCCGGAGGGGCTGCTCCCGCTGGCCGACGTGGTGGAGGTCGGGTACGTGAAGGAGACTGGGTACGTGTGGATCGTGCAGAGGAAGAAGGTGGAGCACGAGTTCAAAATGGTGAGCAAGTTGGTGAGCTACGACACCGAGATCACCGGGTTTATGTTGAAGAAGAGAATCAAGAAGCTCAAGGGCGTCAAGGCCAAGGAGTTCTTGCTCTGGCCGCCGGTTAATGATATCTACGTCGACGACCCGCCCACCGGCAAGATTCACTTCAAGAGCCTCGCCGGTGTCACCAAGACTTTCCCTGTCCAGGCCTTCGCCGCCGGCCAGTGA ATGGCGGACAATAAGGAAGGCGGGATAGTCAAAACCGGCCACGACGACGGCCTCGAGCTGGCAGTTTCTCTCCTGAAGGAGTTCGAGCTGCCGGAGGGGCTGCTCCCGCTGGCCGACGTGGTGGAGGTCGGGTACGTGAAGGAGACTGGGTACGTGTGGATCGTGCAGAGGAAGAAGGTGGAGCACGAGTTCAAAATGGTGAGCAAGTTGGTGAGCTACGACACCGAGATCACCGGGTTTATGTTGAAGAAGAGAATCAAGAAGCTCAAGGGCGTCAAGGCCAAGGAGTTCTTGCTCTGGCCGCCGGTTAATGATATCTACGTCGACGACCCGCCCACCGGCAAGATTCACTTCAAGAGCCTCGCCGGTGTCACCAAGACTTTCCCTGTCCAGGCCTTCGCCGCCGGCCAGTGA MADNKEGGIVKTGHDDGLELAVSLLKEFELPEGLLPLADVVEVGYVKETGYVWIVQRKKVEHEFKMVSKLVSYDTEITGFMLKKRIKKLKGVKAKEFLLWPPVNDIYVDDPPTGKIHFKSLAGVTKTFPVQAFAAGQ Homology
BLAST of Spg001182 vs. NCBI nr
Match: XP_038896279.1 (uncharacterized protein LOC120084552 [Benincasa hispida]) HSP 1 Score: 256.5 bits (654), Expect = 1.3e-64 Identity = 125/137 (91.24%), Postives = 132/137 (96.35%), Query Frame = 0
BLAST of Spg001182 vs. NCBI nr
Match: XP_008461296.1 (PREDICTED: uncharacterized protein LOC103499927 [Cucumis melo] >KAA0058627.1 uncharacterized protein E6C27_scaffold339G00960 [Cucumis melo var. makuwa] >TYK10435.1 uncharacterized protein E5676_scaffold459G00820 [Cucumis melo var. makuwa]) HSP 1 Score: 254.6 bits (649), Expect = 4.8e-64 Identity = 124/137 (90.51%), Postives = 131/137 (95.62%), Query Frame = 0
BLAST of Spg001182 vs. NCBI nr
Match: XP_022986045.1 (uncharacterized protein LOC111483899 [Cucurbita maxima]) HSP 1 Score: 254.2 bits (648), Expect = 6.3e-64 Identity = 123/137 (89.78%), Postives = 131/137 (95.62%), Query Frame = 0
BLAST of Spg001182 vs. NCBI nr
Match: XP_022149634.1 (uncharacterized protein LOC111018020 [Momordica charantia]) HSP 1 Score: 252.7 bits (644), Expect = 1.8e-63 Identity = 122/133 (91.73%), Postives = 130/133 (97.74%), Query Frame = 0
BLAST of Spg001182 vs. NCBI nr
Match: XP_022944663.1 (uncharacterized protein LOC111449053 [Cucurbita moschata] >KAG6570534.1 hypothetical protein SDJN03_29449, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010389.1 hypothetical protein SDJN02_27182, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 252.3 bits (643), Expect = 2.4e-63 Identity = 122/137 (89.05%), Postives = 131/137 (95.62%), Query Frame = 0
BLAST of Spg001182 vs. ExPASy TrEMBL
Match: A0A5D3CFZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00820 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 2.3e-64 Identity = 124/137 (90.51%), Postives = 131/137 (95.62%), Query Frame = 0
BLAST of Spg001182 vs. ExPASy TrEMBL
Match: A0A1S3CE01 (uncharacterized protein LOC103499927 OS=Cucumis melo OX=3656 GN=LOC103499927 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 2.3e-64 Identity = 124/137 (90.51%), Postives = 131/137 (95.62%), Query Frame = 0
BLAST of Spg001182 vs. ExPASy TrEMBL
Match: A0A6J1JCY7 (uncharacterized protein LOC111483899 OS=Cucurbita maxima OX=3661 GN=LOC111483899 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 3.1e-64 Identity = 123/137 (89.78%), Postives = 131/137 (95.62%), Query Frame = 0
BLAST of Spg001182 vs. ExPASy TrEMBL
Match: A0A6J1D7L8 (uncharacterized protein LOC111018020 OS=Momordica charantia OX=3673 GN=LOC111018020 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 8.9e-64 Identity = 122/133 (91.73%), Postives = 130/133 (97.74%), Query Frame = 0
BLAST of Spg001182 vs. ExPASy TrEMBL
Match: A0A6J1FYA1 (uncharacterized protein LOC111449053 OS=Cucurbita moschata OX=3662 GN=LOC111449053 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.2e-63 Identity = 122/137 (89.05%), Postives = 131/137 (95.62%), Query Frame = 0
BLAST of Spg001182 vs. TAIR 10
Match: AT1G09310.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 125.9 bits (315), Expect = 2.4e-29 Identity = 61/122 (50.00%), Postives = 83/122 (68.03%), Query Frame = 0
BLAST of Spg001182 vs. TAIR 10
Match: AT1G56580.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 120.6 bits (301), Expect = 1.0e-27 Identity = 58/123 (47.15%), Postives = 84/123 (68.29%), Query Frame = 0
BLAST of Spg001182 vs. TAIR 10
Match: AT5G46230.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 116.7 bits (291), Expect = 1.5e-26 Identity = 52/132 (39.39%), Postives = 86/132 (65.15%), Query Frame = 0
BLAST of Spg001182 vs. TAIR 10
Match: AT4G24130.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 105.5 bits (262), Expect = 3.4e-23 Identity = 48/129 (37.21%), Postives = 84/129 (65.12%), Query Frame = 0
BLAST of Spg001182 vs. TAIR 10
Match: AT1G30020.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 102.1 bits (253), Expect = 3.7e-22 Identity = 46/91 (50.55%), Postives = 65/91 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|