Spg001044 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg001044
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ribosome-binding factor A family protein
Location	scaffold8: 38249829 .. 38269365 (-)
RNA-Seq Expression	Spg001044
Synteny	Spg001044

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCTGGTGCTTCTAGCCGCCACGGTTTCGCCTGGTTTAACCCGAAACGCCTCCGAATTGCTAAAAACCCTAGGAGCACGAACAGGTATTTATACCCCTCTTCACCACTGAAGAAGGGGACCCGAACTCAATTCTCGACTCTCTTCTCTTGCTCTCTAGCTCTCCCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTTCTCTTTTGTAGGCCACGTCTTCCCCCCTCATCTACAAATTTATCGTTGGTGGCAGGTGAAGGTCAGGTGAGTTTCCTCTGACCAAAATCGACCATCAACATTTTAGTTCAACTATTGCAAGGGTAACGATTTAATTGATGTCTTATCTATTGAGATATGTTTGAAATGATAACTAATATTTACTTGATTCATAGCTAGTAAGATATCTTCTCTCATCTCGAGAGAGAGAAAAAAAAACTTCACTTACGCACACAATCTTACTTCATTGACAATCGCCTCAATACAATCTATAACAAAGTGTTTATTAATGGTTCGTCCATCGTCACAAATAGTATCCCACTCGACTCGTGTCATTTTGTGATTTCCTAAACTCAACGCTCTATCTTCACAGGTCCCAATAAAACATGAATGGTTCCATTAAAGTCGTCACCACACTTATGTTGGGAATTGGGAGTGCAACCAAAGTCCCACATTGGCTAGATAAGGGGATGATCATGGGTTTATAAGGGAGGACAAGTATCTCCATTGGTATGAGGCCTTTTGGGTGGAACCAAAAGCAAAGCCATGAGGGCTTATGCCCAAAGTGGACAATATCATACCATTGTGGAGATCTGTGTCGTGTCCTCGTCCTTAACATGTCTCAATGAACCAATGTAATGTGTCATCTCTATCGATATTAATATGCAAAAATTATTGTTTTTTCTTTTTATCCTTTTTTTTTTTTTAGATTCATGGTTCAAAGCAAAAGGTGAAAGTGGCAAAATTAGTATAATCTAACATTTTATTTTGGGATATCATTTTTTCCTTTATCCCATCATCTTTTGTCTGCCAGATTCCTTTTTTTTTTTTTTTTTTTTAAATCATAAAAAGAAAAATCTTCTTTTCTTTTTTTCTTTACTTGAAATATACATGGTAATATTGATTAAAATGGAAATTAGTTTAAATTTTACCAAATACATTGTCGGGTATCTCTTAACTTGGCACTTGTGTGATTTGACTGCCTAATTTAGATCCGACATTCATTTTTTTTTTTTTTTGGTCATTTTCATTTCTTTAATTTTGTTTACATGATAAATTTGGAAATATAACAACAAACACATAAGCTTCTCTATTTTTTTCCAAAATTAGAGAATATCCCATTAATTTAAAGAATTTTATTTTATTTTTAATTTTATTAAATAGTGGGAAATGTCAGCAAGAATTTCGTATTATTCCACTCAATAACCATAAATAAGGGACATTATGTTCGAAAATTAGAAATGATGAAATTTAATGAGACAATTATCCCTTAATTCATGGAAGATTGTTGTCCCCTCTTCTAATGCAACTTTTTAGCATAGTGTAAAATGAAATAAAATATATTATATTGTAAATTGGGTAAATTCACTTTGTCGGTTTCAAGTAATTATTTTTCACTTATAGGTTATATGGTTTTTATGATTAATGTAAATAAGAAAAAAATTATTGACGCAGCAACAAGTCTAGCATAATTGAGAGAAAATATTATCAAAGTGACTCATAATAACTAAAAAGATTGTGTCAACAAGAGCATATAGCTCAATTGACATAAAGCTTGTACCTTCGCCTAAGAGGTTGAGGTTCAGATCTTCCCACCCCAGATGTTATAAAAAAAAAAACTAAAAAGATTGTTGAAGTAAAAAAAAATGATTATTGATTATAATGAATATATTAAATTCAACCTTTGTTCCACTATCAACTATATGATATGGTTGACAACAAGAGCATAGCTCAACTGGCATAAAGTTGTACTAGTAACCATGAGATCTTTGGTTCAAATCCCTCCACCTCCATATTGTCAAAAAAAAAAAAAAAACAAAAAAACAAAACTATATGATATGGTTATTTTTGTCTGCATTGTTTCCTCTCCCAACTAAACAAGTAAGAGATTTCTCGTTTGTGAGTGAGTCTCGACTCATATTTTGGATTTTATTGGTCATAAAAGACATTATTCTACATTTAGTCACGCTATTATGACTCTCGAAACACGATATTCTTATACTTGTGGTCCGTCGATATTAGGTTAATTAGTGATGGAGGAATATAATCACCTATTGAAGCACATGGAATTGAAGGGGAAAAGGGAGGGGGGGGGGGGGGAATTAGAAATTTCTCACCTACCTATTGGAAAATTTTCAAAATGATAATTATTTTGTGGTTTGCATGGAGCGTTTATGAAAATGCTGCTTGGCTGTAAAAATGAGCACTTTTCCAAAAAGAGAATAGCCTTAACTGCCTATAATTATTACATTGTAAATAATAATAATAATAATAATATTTAAAAAAAAAAAAAAAAAAAAAGCTGCCTATAATTATTACAGAAATTGGGGGTATTTTTTTAGTTTTTTTTTTTATTTATAACATGGGCCCTACGAACTGCCCGTTTAATGGCCCAAATTTATTCTTTACCTTTCACCAATGAACCTTGTCCAAAGTTGTTTTGAATCAAGTAAATTTGGACCAAAAGCAAAAGAGGTACAAAACTAGATCAACTCGACTAATTTTCACAAGGTATTTGTCCAATTTTGCTATACTTAATCATAAAAATAATTTTTTTATTTTAGGAAAAAATACATTTTTAGTACTTCATGTTTGGGTTAGGCTTCATTTTAGTTCTTGAGTTTTCAAACTGGACAATTTAGCCACTGAGGTTTGGATTTCATTTCATTTTGGTCCCTCTGTCCAATTTTCCGTTAATTACTAACGGATTGGTGATGTGACACTATTTTTTAATTAAAAAATTGTTTTTTAGTTTTTTAAAATAAAATAATATTAAAATAATAAAAATATATATTTCTATTTTTTCTTTTTTCATTTCTCTCTCCTCCTTTCTTCTTTTTCTTACCACCACCAAAGTCATCACTCGCCGACACACGTCGTCGTCATCCGTCCCCGAGATCGTCGTTCGCCATCGCCTATACTTTGTTTTCCTTTTTTCCATTTTCTTCCCTCTTCATTCATCTTCTTCTCCTTCCCTTTTCCTCTCTTATTTTCTTTTCTTCTCATTCCCTTTCGCCCTCACTTTCTTCTCCTAAACCTTTGTATTTAAACAAGAAAGGAAAACGTTTCAGATCTGGGTTCATGCAGTCGTGGATTTTCCATATCTGAATTCGTGCTACCGTGGGTTAGTGTCGCCAACACTTGTCGTCGGAGAAGGAGAAAATGAGAGAGGAAGAGATTTATGCACGTGTTTTGTTTCCAAATTTGTTCGTGCCACCGTGAGTTTTGTTTCCAGATCTGTTCGTGTTGTCGTGGGTTTCCAGATATGTTACAGAGGGAGAGATTCATGCGCGAGTTCGTGTCGCCATGGGTTCAGGCCGCCAACACTTGTCGTCGGAGAAGGAGAAGACCGAGAGAGGGAGAGATTCTTTTGCGGGAGAGATTCGATTCCAGATTTGTTCAAACGTGTTGTTCGTGACTGTTCCAAATCTGTTCAAATAGCATGGATTTTGTTTCACTTTAGGAAAAAAAAAAAACCGAAGAGAGAAAAAGAAAAGAAAAAAAGGAGAAATAAGGAAAAAAAGGGAAAGAAAAAAAAAAGTCAATCGTCGGCCGCCAGTGGACGATTGTCGATGGTGGAGGTTGAAATTAGATTGAAAAAGATGGAGTAGAAGGATGGAAAGAAAGAAGATGAAGAAAAAAGAAGAAAGAAGAACGAAAAAGAAAAAGAAAAATACAAAAAAAATATTATTTTATTTAAAAAATTCAAATAATATAATTTTTTTTAATAAAAAATGCATGTCAAGTAAGCAATTCGTCAATTATAAACGGAAAATTGGATGGAAGGACAAAAAAAAAAAAAAAAACGAAATCTAAACCTCATAGGCTAAAATGTCAAGCTTTAAACTTAGGGGCCAAAATGAAACCTAACCCAAACCTCAGGGACTAAAAGTGTATTTTTTCAAAATTTTTATATTTCAAATAAGTGACCATTATAGAGGATGAACAAGTTTACTTAAAGTCCCTCACTTCTTTTCAAATTGCTCCAATGACAAACATTATTAGTTTCTAATTCCTATCGATTGACTTTTGTTCTGTAGATAATTTTCTTTAAAATTTTAACCATGTTCTTAGATGTGTAATTGTTGGCTCTAGATTTTTTCATGTCTAAATGTAATTCCTAATAGGTATATAAGGTTCATACATTTGCTTCCACATCATTCAAAAGTAAACGTCTTCAACTATGTTTACGAGTTTAATTGATGCATCTTTACTTTCGTGGGGAGGAGACAAGGTGATCCACATAGGACCAATGAATACTCCCAAACTTTGAAATCTTTATTAATTAAGAATATATGTTGCATAGATTATCACAAGATTGGTTTACACAGTTTAGTGGCTTACACGCTACTATCCATTTGCTAGGTTCTAGCCTTCTAGGTTTGAGTACTTCAATTGACAATTAGCTTGTATTATTACAAGTAATTACCGACATGTGATGCACATGTTTATGAATTTTATATTTTATATTTTATTTATTTAATTATAGTGAAAAAAAATTAAAATTTGAATATGGCCTAAAATTAAAAATAATGAATGAAAAATTAAAATGAGAAAGTTAAAAAAAAAAAAATTATCATTCATATAATTGGGATAAAATTACAATTCATATAATTAGGATAAATTAATAATTATTTTCTAATAATTATGTTTTAAAAAGAAAGTAATACAATTATAATATAATTATTCCCTAATCATAAGGTTAAGGAAAAAATAAATTAAATAGTAGGACAATCATTTTTCAATCATTACAATTTGAGGGAAAAAAGAAATACAAAATTAAAACTAAAACTAAATATGAAAACTAAAAAAATAAATAGATAAAAAGAAAAGGAATTGTTTAAAACCTCTAATTATTTTCAATGATTAAGTTTTTTTTTTTTGACAAAATTCAATGATTAAATTGAGGAAATAAAAGAAGTACAAAAATAAAAATTAAAAATAAATCGGTGTTACATTACACGAAAGAAAGAAAGAAAATATATATTAGAAGAATCCACCTCCAAAACTTTTTGAAAAGTCTCAGTTTTTTCCATTTTTGTTAAAATGCATTTTTAACTAATTACCCCCCCCCCCTCCCTCCATATGCTAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTCATCCATAACTAGCACCCAATAAAGCTAATGTGATAAAAAGAAAAGAAATTTCTTCTACCTCTGTTTTCTTTTTCCCTTTTATTTTCGTTTTTCATATTTTTCCAAATGAAATTGAGAAGAAAGAAAGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCTTCGGAAAAGTCTATGAGTGGAGGAAGAGAGGAGAGAGTTACGGTAAAGAATTGATAGAATAATCAGGTGGGTTGAATGACTGTTACTGTAGCAACACGAGGGTAAAAATAACTCACTTCACCACTTATTTTTGTTGATGTCCCAAACACTAAATGGGCTATAATAGCTCCCTCTATAGCCAACACAGGGGCTCAAAAAGCCGCTTAAATCATGAAAAAGTTCCTATGATAATCCTATTTCATGGTATTATCATGTACTCGTCATTTCACCAATGCTCGAGCTTCGAGTGAGCTTACTACTTAGGTATTTTCTACCATTATTTGCTTCGCACTTGACTCAATTACTTGATGTACTTGCTCTATTAGGCTCTTGTTAAGGAGAAAAAATCTATTTTTTATTAGACTTGGTATATGCTTACCTTACTCATGGTATTACATCAATATGTTCAACATTTCTAGCGACGTTTTCACATGTCCATGGATTTGACATGAACACAAGAGGTGAATCGACATCTCTATTGTATCATTAAAAAATTTGGTGAAATATTAAAAGATAGCAATAAAATGTAATTAATGTAAATATAATATTAATAATAAGTTTTTCCACTTATCTAGAAAAATGTAAAATATTTATTTATTAATTTAAACATTTTTAATTTTAATTTTTTTCAAAAAATATCCATCAACATAAACATTTTATTGATATTTTGATCGACATTTCCATAAAATTGAGACAGAACTTTATTGCATATTTGTTAGGATGTGGGTCCAAATTAACCTTTGATTAATCCACATGGCCTTATTACTTGTGCCAAGGCTCGTCTGCTGTGCAAGTGATTCGGTAAAATGTTTTGTCCTAGTGAAACAAAGGGAAAATTTCTAGTCCTCCCGTAGTAGGGAAAATTCCCTACCCCCACTGAATGGATGCCACGTGTCATCCATTTAGTGGGAGAGGTAGGAAATTTAGAAATTTTCCCGTGAAGGGAAACAAAGGAGTAATAAAAGAAATAATGGTAAAAATGATATATCTCTCGTCTCCAACTTGTTTAATTTTTACTCCTCAAAAAAAAAAAAAAAAAAAAAAGAAAACTTGTTTAATTTTTACATTTTATAAAAATAATAATAATTAATATCTTTTTCGTGATATAAACCAAGATAAATTCAATTATTGTACTATAAAAAGATGAATTCAATTATCATTTTACTTCAAATAATAATAATTTTACTTTTAACTTTTTCAAAAAGGTTGAACTTTTTTTTTTTTTAAATACAAAAAGGTTCAACTTAATTTTATTGAAATGAACCATAAATTTAATCATATATTGCAATTTTTTTTTTTTTGAAAGAAAATACCTCTTTATTTACGCCACATGGGCAGCATGAAAAAGGTCCAATTGGACCTTAGTACATAACCAACTAGGGAAATGACCCACCCAAGTTGAATTACTTCATCTGGCAAACTTTGCCACCACGTCAGCCACTTTATTACAACACCTGGGAACAAAGGAAAAATCTATTTTTAAAAAACTTGGAATTAAATCCCATATTCTTGCCACTTCAACTTCCACTTCGTCCCAAACCACTGAAGCTTTATTGATAGAATTAATTGCCATCAAATTATCAGATTCCACTTTCAGCTGTTTGCATCCCATCGACAAAGCATCCTTCATGCATTCGTAAATTGCTTTCACCTCTGCCCTCAGAGGATCCATTGAGAAATCGAAAAATAAAGCTGAGGCAATCATCATTGCACCATCCTTGTTGAACAAATCATATATTGCAATTTTATCCGATGTTGAATCCTCTACTTTTAACCAAAAAGATCAAGAAAAAAAAAAAACCTAAAACTCACTATTAATTTCAACAAAATTTAAGTTTTGCTAAAATTAACTAGATCAGTGCACAACATGATTGAATAAATCTTTCCAGACTTGTAAATTTCAACAATAATCCTAATGGTTTTTTTTTTTTAATTCATTAATTTTGTACTAAACCTATGTTTTTTTTTTATTGTTTTTTTTATTTTTAATTACATGTGTTGTAGGTAAAAAATTCTCGCTGGCCTAACGTTTCGGAATACCTGGAAATAACAGGCCCAAATGCCAAAGAAGCGGCCCGTCACAATCAGAGAGAAAGAAAGATCCACACCTCCCTACACTCTCCTCCTCGGCCTCGGCCCATTACCGAGGCTGAGGGAGGGGTTGACCTCGCCCAATGCCGAGGCCAACCAAAGGCGTGGGCCCAAGCCCGTCGTGCAACGACCTGTTGTCGTCTCCCAAAGCTCCGAGGTAAACCCTAGCGAGAAAAAGGAATTGAAAAAGAGAATACTAAATATTGCAGGTACATCTACGGGACTTTTGTGTTACAATTGCTTTCTCTCCTTCGGAACTGGCTTAAGCATCGGAGTGTGTGTGGCCTACACCACACCACTGTGCAGCATTTGCTCGTCTTGCAGGTCACGTATTCTCCCTCTCTTCAACAAATTCACTGCTAGTGTCACGTGGAAGTTAGGCGATCCGCCTAGTCTAAATTTAACTATCAACAACATGCATATAAGAATATTTTCATTGATGATCTCTTAGATGAAAGTCTATGATAAAATTCACAAAACCTATTCAGGTTGAATGTGATTGCAACACTTATGAAAGTTTAAGTTTAAATTTGATAAAACTGAAAGTTTAAGGTAAAAGCTAATAGAAGTGGCCAAATACAGACTAAAATTTGATTTTTTTTCATAATTATTTTTGGTTAAATATAGTAAATAGTTTCGAATAGTTTAATCAATTATCAATTTGTTCTTCAATCTTTAAAAGTTCTCAAGTTTACCCTTACTAATATATTCAAAATTCTTCACTACATCATTTTATAAAACAAAATAGTTGAAATTTGTTTTTTTTTTTTTTTTGAAAAAAAATATAGTTGAAATTTGTTAATGAAAATTTGATATGTCATTAAATTATTGTTTTATTAGCATATTTAAACAAGTGAATACTACTCAAATATTATTACCATATATTAATACTTTTCTTATGACATGTTTTTAAAACCGGATAGGGAGATGTGTAACAAGTTAACATTTTAAATAACATACATGAAAGTAACAAAACTATCAATGTATGATGGCAAGTAATCAAATTATAAACACCGGATTGAAAAGGCCAACCAAGAAATAAATCAACTTGTTATTTGTTAAAAACCTATTCACACTCAAACAAAAAGTTAGAAATTTGAATCTCACTCCAAATATTGTTGAATTGGAGAATAGGATCGAAAGTAACCACAAATTATAAAAACTAAAATAGTAAATTAACCTGTACACCAACCTAAAAAGTTCATGAAAATTAAAGAACTAAATAGGGAAAAGGAATTTCAAAAATTCAAAAACCCTAAAGGTGTTTTGGCTCAAGGAGTTGTGAAGTCGAGGTTAGGTGGAGTTAATAACTCCACTCAACTCCTTGTTTGGCTACATACAACACTGGAAAATTTATAGTACTACGGTGGTACATACTCCCTCCATTCAGCATTTGACACGTCATTTAATGATCATTTAATAATATAATATTTTATTCTATGAGTCTTACACTATTCTTAAATGTTTCTTTCATGGTAACCAATGAATGGAGGTAGTATGGGAAAAATTTCCATACAGTACTAGAAATTTTCCCTACAGCACTCAGATGTGAGCCCACAAACTTATTAACTAATTACAACACTCAGATGTGAACCCACAAACTTATTAACTCTTATCCAAACACTTTAGTGTGGGTTCCATAAACTTATGAACTCCGACTCCAACTCCTAAAACAAAATGACTCTAGATTTCATAACTTTGACTCCTTGAGCCAAACCTCCCTAAAGTAAGATCAAAATATTAAATTTTCATCATGTCGATATTTCCATCGACACACATGTCCATGGGTCAGACATCGACATACGAAATTAATCAACATTCCATTACATCATAAAAAAATCTATAAAATATTTTTAAAAAGTTGCAATAAAATGTAACCAACATGAATATTATATTTGGTAATAGGCATTTAAACACTTTTTTGAATATTTTGCTTTTAAGATTTTTTCAGTAATAACATCCATCTCCAATTCCATCAACATTTTTCATAAAATTGGCTAAGATGTAAGAATTGGGCTAAAAAAATCTTGAGTTGAATGATGCTCAAATCCAAAACACTCTCTCTTCTCGGCAATTTCACAGGCCTTACTAATCCAAAACCTCAGAAAAAGCTCATAGCTCGCAAATCCGAATCCATTTCAGCCCAACAAAGTAGAGATTTCGATCACAAATATCAAAATTATTCATCTGGGGAATCAAATTTCAGGATGCCGCATCTTCTGCAGCAAATTCATCCTCAACCCCATCATTGGCCACTCAAACTTTCGTCTTCCCTCGCATCTTCACGATTTCCTTCCCAATTGCAAGCTTCACTGCCATGGTTTTGCTCCCAGAGTTCCGTCGCCCTTGTTCGTCAACGTCCGGTAACGAGGGGTGCAACCATTCGGTGTATGGCCAATTCACGGAGGGTTAAAATGGTGGCGAAGCAGATTCAGAGGGAGCTTTCCGACATGCTTCTTACTGATAAGGTGTTGCAGTACGCCATTCTTCCTGAGGCCTCTTTGGGAGCGGATAAGTACCTCTCGTCTCTCACCACCATCACCGATGTTGAAGTCTCCGCCGACTTGCAGGTATTTTGACAAATTGTTCAAATTGAAGAGCTGGGATGGGTGTTTCTTTTTGCTGTTCTTGAGATATTTTGTAGTGGGTAGCAGAATTATGTTTTGTTTTTAATTCGTTTTCTGGATACCCCCCAAAACTGTAGTTCGTTATGGAACTGGGAAAGAATTGAAGCTAAGGGCTAAAGCCTGAAGCCTAAATGGTGATTTTATGCTTGAATATGGTAGTAAATATGAATATTGTATGAGATTTACACTACATTCAAGCGGTGCATTTTTTGAAGAGAAGGGATTGTAACGAATTTTGACTTCTTAAATTGCTACACAACTCAATTGCTGGTTGCATCTTGAACTGTGGATATAGTGTAGTTTAGCCACTGGGAAACGATTAGGAGGCTTCAGAAGCCCATTAGAAATGTTTGGTTGAAACGTTTTTGACATTAGTTCTTAACTCGAGGAACTAGACTTTTTGAGAAGGAGAACATATTGAAGAGAACTCTTGAGGAATGCTTGAAAGTCACTTTAACCTTGATAAGCAAGTGCTGGGACTACAATGCTTTTGGAAGAATTCCTGATAAGTCATGCTTATATCGACCACTGGGATAACCATTGCTTCTCAAGCCTGGACTGATTCTACTATGACCAAGGAAAGAAGTTTGTCAATATCTTTTTTCATACAGCAACCAATCCACCTCACTTCTGCTTTTGAACTTGCAGTGGCAGTTGTGTAAGTGGTGGTTGTGTTTTTTTATCGATGTTTGAACAGATTTAACATTGCATGAGCTGCCTATATCTTAGGATTTACCTTTTGGTCTTATGGTTGTTGAAAGTTTTTCTTTAACCGAGGTTTAGATATGGATATATGATCTTTGAGTGTCAGACTAAAAAATGTTCATGACAGTGCGATACAAACCCTTTGGATTTCTCTGAACCTTGACTGAGCTGGTTAGTGGTTTGCTCTTTGCTCAACAGTAGTAAACTTCTTGGCTTTCAATCTTTCCATGAAATCAGTTTTCATCTCTCCGTTTCTTGTTTGTTGTCAATGCCAAAGGCAGCTTAAATATTGTTTCTTGAAAGAGTCTGACATATACCTTTTTATTGTCGTGAAAATTTCAGTACTATGAAGGTCAAACCTTATTTCGCCATTTAACTAACTCTTCACCTTCCGTGAGTTTACAAGTCAGTTTGCTATTTCAATTGTACAATTTAGGTACCGTGTGGATGTGATTACGTCAATCTCAGCTTAAACTCTCCAGGAAAAAAATTAAAGAGCTTTTTCTTTTCATTTTGATTTATATGATGGCCATCTTGACCGTTGCTTCAGCTGATAAGTAATTGTTATATGCTATATATGAATACGGACACGCAGGTGGTTAAAGTATATGTATCTGTCTTTGGTGATGAAAGAGGAAAGGATGTTGCTATGGCTGGGTTGAAGTCTAAAGCTAAGTATGTTCGAAGTGTATTGGGAAAACGTATGAAGCTTCGGCTAACTCCTGAGATACGTTTTATAGAGGATGAGTCTTTTGAGAGAGGAAGCAGGGTAAGTAACAATTTATCTTCTTGCTTATATATATTTTCTTGCTATGGCTGGAGACCAGTTCAGTTACTTTTAAGAATTCCTTCCACAAGATGTTTTTCATCTCATATTCTTCACTGTTTCTCAATGCATGTGCTTATTTCTTAGGAACTTCGGGTTTATTGCATATTTCCTATTGAAATATCTCTTGGAAGTTCTAGAAGTATCATTGTTTTGGATGCTATTTCCAACAACACAAAATACTTGGAAATCATCAATTTTCCAGTAACGAAAAGAGAGATGGTTTTGTGTGAGAACTGTTGACAAAATTGAAAATGAAAGGTTGAAAATAATATTGCGGAAGCAATAATCAAACTCTCAATGTTTGTTGAACAAAGAGAGAAAATGGAAAATGAGAGTGGAATCCAAAAGATGAATAAACTTCTAATTGATGTAGAAAACTTGGTGATACAAACTTTACATGGAAGTTCATCCTTTTATAGGCACAAGAATGAACCTAACTTACAATCTTTAAAACAACATTAAAGTTAGTAACTCAAAAAACTTCAAAAGATAACTTAAAAGACAAAAAACTGAAATGTAAATCTAACTTCAACAAAATAAATTTAAAACATTAAACTGAAAATTAAATGTAAAAAGAAAAAACTCATAAAACTTTAACACTCCTCCTTGAGGTTTTTCTTTGTGACGCCCAGCTTTTGGCGTAGAAACAGAAATGGCCTATGTGGTAGAGCTTTTGTGAGAATATCGGCAAGTTGTTGCTCAGAACTGCAAAACTTGAGTTTGATTTCGCATTCTTTCTCTGCTTCCCTCAACAAATGAAATTTAACTTTGATGTGTTTCGTTCTACCATGCTGTACAGGATTGGAGGCAATAGCAATAGCGGACTTGTTATCACAAAACAATTTTGTAGGCTCTTGAGGTTCAAATCCCAAATCACTAAGCAATTTGCGAAGCCATATTGCTTGATTTGCAGCTGATGCAGCTGAAATATATTCAGCTTCGGCAGTTGATTGAGCCACAACTTCTTGCTTTCTTGAATTCCAAGAGAAAATCCCAGTGCCAAGAGAAAAAACATAACCGGAAGTACTCTTAGAATCATCAACACAACCAGCCCAATCACTGTCAGAATATCCAGTCAATTCCAAATCACCTGTAAAATTGAACCAAATTCCAAAATCAAGAGTACCTTTTAAGTATCTAAGCACTCTTTTAGCAATACCAAAATGAACTTCACTGGGTGAATTCATATATCTTGATAGAAAACTTGCAGCGAACATCAAGTCCGGTCTAGATGCTGTCAAATACAAGAGACTTCCTACTAAACTTCTGTAGTTTGTAGGATTTGAAAGCTTATCACCGTCATTCTTTGAGACTTTTAAATTTATCGCTAAAGGAGTAGAAACAACTTTACATGTCTCCATCTTGAATTTCTTCAAAATTCCTTGAGCGTACTTTCTTTGGGTAATAAAAATACCCTTATCTTCTTGATGAATTTCCATACCAAGAAAATAACGCATGTAACCAAGATCTGACATCTCAAACATCTTTTCCATCTCAACTTTAAAATCTTGTAGCATTTGATAATCATTTCCAGTTACAAGCATATCATCAACATAAAGAGAAAGAATGAGCTGCTTAGAGTTGTCACCAACCTTAACATAGAGAGTAGTTTCGCTCATACTCCTCCTAAAACCTTGAAGAAGCAAGTAAGAATCAATCTTACTATACCAAGCACGAGGTGCCTGCTTCAATCCATAAAGGGCTTTGTTCAGATGATATACTTTGTCTTCTTTGCCTTTATCCACAAACCCTTCAGGTTGATTCACATAAATCTCCTCCGTAAGATCACCATTCAAAAAAGCTGATTTGACATCTAGATGGAATATTTTCCACCCCAAGTGTGCAGCTAAAGCAATAATCAAGCGTATTGTGTCGTGTCGTGCAACTGGAGCAAATGTATCTCCATAATCAATTCCGGGTTGTTGTGCATAACCCTTTACCACTAACCTTGCTTTATATTTGTTGATTGAACCGTCAGAATTATACTTCACTCTGAACACCCATTTCACACCTAAGGCGTTCTTTCCTCGTGGTTGCTCCACAAGCTCCCATGTATTATTTTTATTGATCATCTCCAATTCTTCTTTCATAGCGGCAATCCATTCAGCAGATTGTGAAGCCTCATAATAGTTATTTGGTTCAACAATAACAAGATTACAACTTTCATATACATCAGCAAGTGATCTTACCTTGTAATTCGGATCATCACCAGTTGCATCAATAAGGTCATCATCATTTGATGGAGAATTTTGGTTATCTTGATCATTAGAAACAGTTGAATCAACAGAAGATTCATTTTGTTCTAAGTTTTCAAGACGAGTGGATGAGTCTCTCACAATTGCTTGCTTCTCAAAATCCCAATAAGCATCTTCATCAATGATGACATCACGACTCAAGATAACCTTTTCAGTGTTCAAGTCAAAAATTCTATACCCTTTTGAATCAGCAGCATAGCCAATAAATACTCCCTTAATTGCCTTCTCATCAAGTTTGGATCTCTTAATTGAAGGAACAAAAGAGTAACATACTGATCCAAAAATCTTCAAGTTCTTAACAGAAGGTTTTCTACCTGACCAAGCTTCATAAGGAGTCTTGCCCTCAACTGCCCTTGTAGGTAGTCTATTGAGCAAATAAATAGCAGTACATACAGCTTCTCCCCAAAATTTCTTTGGTAATTTTTTCCCAAAGAGTAGACATCTTGCCATCTCCATCACGGTTCTGTTTTTCCTTTCCGATACACCATTCTGTTGTGGTGTATAGGCAATGGACAACTGGTGTTGGATTCCCGAGTCTTCACAAAACTTGTCAAATTGCTTGGAGGTATATTCCTTCCCATTATCCGTTCTCAAAGTTTTGAGCTTACAACCACTTTGAGTTTCAACCAAATTTATGAACTTCTTAAAAACTTCAAAAACTTGAGTTCTCTCAACCAAAAAATATACCCATGTCATCCTGGTAAAATCATCAATAAACAGAATGAAATATTTATTATTCCCAATAGATATGTTGCGCATGGGACCGCAAACATCACTATGCACCAATTCAAGCCTTTCTTTGGCTCTATAATTGCCACCTTTTGAAAAAGGCAGTCTGTGCATCTTTCCTTCTTGGCAACTTTCACAAATCTGATCAAAGGAGGTAAAGTTGAAAAAATCATCAACCATATTGGAAGAATGCAAAATCTTCAAGGCTTTGTTGTTGTAGTGACCAAAGCGATGATGCCACTTTTTGCTTTCTTCTACTTTTGCATTTAGTGCATGATGACATAGAGAGTCACCATTCAAAAAGAAAGCATTGCCAACCATGTTGACTCTTGCAACCTCTGCTCCTTGTGGATCATAAATAACACAAATTTGGTCCTTGAAAACCACAGAAAATTTGTTATGCAACAATTGAGCAATACTAAGCAAGTTTTGAGATAACCTCGGAACAAATAAAACGTTGGATATTTTCTTTTCACCTTGCTTAGTATGCATAGTGACAGTACCTTTACCTTCAGCTAGCACTGTCTCGCCATGTCCAAGAACAACCTTAGACTTTATAGATCTATCCATTTGGCTAAAAAGATTTATATCTTTAGCCATATGAGTAGTACATCCACTGTCAATAAGCCAAGAAGTTGACTCTTTGTCATCAACATGAGAAGCCATAAATAAAAAACTTGTTTCTTGACTATCGTTGGCACAATTTGCTTGTTCCGGAGGATGCTGGGTTTGGTCTTTTTTGGCATAACAAAATTTCTCTGTATGACCATCTTTGTTGCAGTAATCACAATGATAGACTTTCTTGTTTTTTGACCAACAATTTTTCTCGGCATGATTGGTCTTTTTACAATAACAACAAGGAGGAAATTTACCTTTCTTCGATGCTCCTCCTTTTCCCTTGCTCCCTTGATCTTTGGTCGCTTGTCTATCATCTTCGACAATTGGCTTCTTGCCTTTAGACTTGGCATGAAAAGCACCCTCAACATGCTCCTCATTACGCATTGTATCCCTTTGTTCTTGGGCTTGTAATTTGCTACTTAACTCAGCTATAGAGAGAGTAGTCAAATCAGATGACTCTTCTATGGCTGAGATTTTTGACTCAAATTTGCTAGGAACACTAACCATTATTTTTTCCACAACTCTTTGATCTGGAAAAGTTTCACCAGTTAGTCTTATTTGGTTTACAATGGTCATCACTTTTGTTGTGTAGTCCCTCACAGAATCTGAGTCCTTCATTTTCAACATCTCAAACTCTCTCTTGAGAGTCAATAATTTGACGGCTTTCACCCGTGCACTTCCTTCAAATTCTTCTTGCAATTTATCCCAAGCTTCTTTTGCCGTTTTACAATCAATAATCCTAGCAAATATAGGATCTGATAAAGCGGCATGAATCACCGATAAAGCCTTTGGCTTCTTTAATTTCTCCTCTTCATGTAGTCTAATCTGATTCAACGTTGGATTTTCTCCTAATGGTTGAGGATCAGCATTAGTTGAAACAGATTCCCAAAGGCCAAGAGCCTTGAGATAGGATTGCATTTTAACAACCCAAAATTGGTAGTTTTCACCACCAAAATGTGGAGGAGAGGCGACACCAAAATTAGAAGACATTTTCTTCAAATACAAAAATGGAATTTCTCACTCTCAAATAAAATCACAGCCCTTTAAATCTAAGGCTCTGATACCACTGTTGACAAAATTGAAAATGAAAGGTTGAAAATAATATTGCGGAAGCAATAATCAAACTCTCAATGTTTGTTGAACAAAGAGAGAAAATGGAAAATGAGAGTGGAATCCAAAAGATGAATAAACTTCTAATTGATGTAGAAAACTTGGTGATACAAACTTTACATGGAAGTTCATCCTTTTATAGGCACAAGAATGAACCTAACTTACAATCTTTAAAACAACATTAAAGTTAGTAACTCAAAAAACTTCAAAAGATAACTTAAAAGACAAAAAACTGAAATGTAAATCTAACTTCAACAAAATAAATTTAAAACATTAAACTGAAAATTAAATGTAAAAAGAAAAAACTCATAAAACTTTAACACGATGGGTCATCTAGTAATAAGGGCTTGAGATGTTAGAGCTCCAAGGTCTGAATTTAAGTCTAGTTATAGAACTTAAAAAGTGTAAAATTTTTGTTGTCTTTGAAGTTGACCTTGAGGTGGGTGAAGCATCTGAAGATTATTTGAGTTGGCCATAAGCATAATGCAATGAGTGGGGGGCTCTCAATACTTCAGGCCCCAGTGAATAATCATTTGGTTTTGTTTTTTTTTAAAAAAATTAAGCTTATAAACACTACTTTCACCTATGAGTTTCTTTGTTTTGTTATTTCCTTTCTAAAAATGTTTTCAAAATTCAAGTCAAGTTTTGAAAACTTAAAAAAGTAGTTTTTAAAATCTTGTTTTGGATTTAAAACCATAATAAAGAAATTGTGAAGACAATAAGGTATCAAGCACAATTTTGAAAAGATAGAAAACTAAAAATGAGATGGTTATCAAAAGGGGTCTCAATAATTCTATTATCAAGAGAGAGAACAGATTATGTAGATGCAATAGATTTGACTGTTAAAAGTACAGCACAAACACTCATATGCATTGGGTAGGATCTTCTTGGGTGAAAAAGAGACTCCTATTTGAAACTCATCCTATCATTGCCTATTGCAACTTTTCATATCCCTATAATTTAAGCAACTGGAAGATTATTTTCAAGCTTCTTTCCTGTGCTATTTTGGTTTGAACTTTCCCAGGTAATTGCCATATTAGATCGGATCAAGGACAAAAAGAAGGATATCGATGATGAAGGCTTTGAGCAATCTGAATTATCCGATGCTTCTCAAGACGACAGGGACTGGGAAGGCGACGATGCTGATGAAGACATAATATATGTACGATAGGCTGTTCCATTTCTTGTCCAACTTACGCTCATCTGTGCTGAGGCATCGGTTAACTCTCGCAGGTTCGTTATATTACGAGTTTAAGCAACAAATATACTTCCTCTGTCCTTGTCCTTATCTATGTTAGCTTTTACATATGAAATATTCTAAACTAATATTTCCAAGATGCATTGCTTCTAAAATGTCTGAAATTCATGGTTTTGAGTTTTATAGTCAATCATCCATGTGGGTATAATTTTATATATGAAAGCTCTGGGGCTCTAGGTAAGCACTTTTTCAAAAAATATTTTTTCTTAAAATACTTTGGATAGGGTTTTAGCTTTAGTGGCCCTTTAGTTTTTGTGGTTTTTCTTCTGGGATGGTTTCTCCCAGGGGCTTTTTGTACTTTAATGCTTTATTTTGGCTTTTGTAACTTCTCTCCCTCTTTTCAAATATCACTGAAGTTCAAGAAAATAATAAATAAAACATTTGTGTGTTTAGTGACATTTTCATAAAAGTGATTTTGATGACCAGTTTGTTTTGTTACATTACATCTAACAATGATTCTTCAAATATCAAATTACCAAAAAAACCATTTGTTGTCTTTAAATTTAAGAACTATGCAGAAAAATATTTCTTGTCATTGGTTTTTCAATTAATTTTTCTACCTATTAACTTTAAAATATAATACATCTTAATCAAATTTAAAGTTATATGAAGGGATAAAGAGAATTAAATATTGTCAATCTTATCTGCTGTTTTTTTGTTTTGAAAAGTGTTTCTAGAAATTATTCGACCAAATTAATTTTCTATACTAAAAAAATGTTTATTTTTCCAAAAAAAAGAAAAAAAAAAAACAAAAACCAATTCAAACCTTATTTTCAGGCTCTCAATTATTGTAAAAAATAAAAAATCTGATACTTTTTGTTCTTCAAATTTGGCTAAAACTTCAAAAGTGTATTCAAAACAAAGCAAAAGGAAAGTTATACTTATATTAAACAAATTAAACTTTAAAAAACAAAAAGTAAAAAATGAAAACATTATTAAATGGGGGTCTTATTAACTTTAGTCTGGATTCTTTTGGTGTGTTGAACAGTTGAAGCACTTTGATTTTGGATGATAGAATTTTGAAGCTTCCATTGTTATTTGCAGAGCAAGAAGTCAAAGTCAAGATGCTTCAACCACCAAACTGCCTCTTCACTCACAATGATGTTCCTTTAAATTCTCACCTTGCCATCCAAATTTATTATCATCAAAGGTAATAAATTTCACATTCTCTCTTTTGATTCAATTGTTTGTAGTTGCATAGAGATGACAAATATCAAATACATATTGTATAAGGATTTAAATGTCGATGTCGAGAAAAATGTCATTTCGTATTGGTATTTGTCATGATTTGACGTTTTCAATATTTTGTTGATATCTCCATAGCGAGAAGGTATATATTTCTCTTTAACATTGGTATCGAATCTTTCGATTCACAGGAATATTGTTGGTAGAAATTAAAAGGGTGTTTTTGTGAGCATCTTTTTTTTTTTTTTTTTTTTGTGGACTTTTTTCTTGGGAGCATCTATTGTTTGTTTGTTGGGATGAGATAATGTTCATCTTTGCAACTTATTCTTTCCTTTTTTTTTTTTATTGGAATGTTTGATTATTTATTTATTTGGGTCATAGAGATTTAAAGGTGGAAATGACAAGATCCTCAAAAATTATTCCAAGTTTTCTTCCATTAATCAAATTCAAAATGTAAACCAAGGATTTGTAGGAAAGTAA

mRNA sequence

ATGGTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCTGGTGCTTCTAGCCGCCACGGTTTCGCCTGGTTTAACCCGAAACGCCTCCGAATTGCTAAAAACCCTAGGAGCACGAACAGGCCACGTCTTCCCCCCTCATCTACAAATTTATCGTTGGTGGCAGGTGAAGGTCAGATCTGTTCGTGTTGTCGTGGGTTTCCAGATATGTTACAGAGGGAGAGATTCATGCGCGAGTTCGCCCAAATGCCAAAGAAGCGGCCCGTCACAATCAGAGAGAAAGAAAGATCCACACCTCCCTACACTCTCCTCCTCGGCCTCGGCCCATTACCGAGGCTGAGGGAGGGGTTGACCTCGCCCAATGCCGAGGCCAACCAAAGGCGTGGGCCCAAGCCCGTCGTGCAACGACCTGTTGTCGTCTCCCAAAGCTCCGAGGTAAACCCTAGCGAGAAAAAGGAATTGAAAAAGAGAATACTAAATATTGCAGGCCTTACTAATCCAAAACCTCAGAAAAAGCTCATAGCTCGCAAATCCGAATCCATTTCAGCCCAACAAAGTAGAGATTTCGATCACAAATATCAAAATTATTCATCTGGGGAATCAAATTTCAGGATGCCGCATCTTCTGCAGCAAATTCATCCTCAACCCCATCATTGGCCACTCAAACTTTCGTCTTCCCTCGCATCTTCACGATTTCCTTCCCAATTGCAAGCTTCACTGCCATGGTTTTGCTCCCAGAGTTCCGTCGCCCTTGTTCGTCAACGTCCGGTAACGAGGGGTGCAACCATTCGGTGTATGGCCAATTCACGGAGGGTTAAAATGGTGGCGAAGCAGATTCAGAGGGAGCTTTCCGACATGCTTCTTACTGATAAGGTGTTGCAGTACGCCATTCTTCCTGAGGCCTCTTTGGGAGCGGATAAGTACCTCTCGTCTCTCACCACCATCACCGATGTTGAAGTCTCCGCCGACTTGCAGGTGGTTAAAGTATATGTATCTGTCTTTGGTGATGAAAGAGGAAAGGATGTTGCTATGGCTGGGTTGAAGTCTAAAGCTAAGTATGTTCGAAGTGTATTGGGAAAACGTATGAAGCTTCGGCTAACTCCTGAGATACGTTTTATAGAGGATGAGTCTTTTGAGAGAGGAAGCAGGGTAATTGCCATATTAGATCGGATCAAGGACAAAAAGAAGGATATCGATGATGAAGGCTTTGAGCAATCTGAATTATCCGATGCTTCTCAAGACGACAGGGACTGGGAAGGCGACGATGCTGATGAAGACATAATATATGTACGATAG

Coding sequence (CDS)

ATGGTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCTGGTGCTTCTAGCCGCCACGGTTTCGCCTGGTTTAACCCGAAACGCCTCCGAATTGCTAAAAACCCTAGGAGCACGAACAGGCCACGTCTTCCCCCCTCATCTACAAATTTATCGTTGGTGGCAGGTGAAGGTCAGATCTGTTCGTGTTGTCGTGGGTTTCCAGATATGTTACAGAGGGAGAGATTCATGCGCGAGTTCGCCCAAATGCCAAAGAAGCGGCCCGTCACAATCAGAGAGAAAGAAAGATCCACACCTCCCTACACTCTCCTCCTCGGCCTCGGCCCATTACCGAGGCTGAGGGAGGGGTTGACCTCGCCCAATGCCGAGGCCAACCAAAGGCGTGGGCCCAAGCCCGTCGTGCAACGACCTGTTGTCGTCTCCCAAAGCTCCGAGGTAAACCCTAGCGAGAAAAAGGAATTGAAAAAGAGAATACTAAATATTGCAGGCCTTACTAATCCAAAACCTCAGAAAAAGCTCATAGCTCGCAAATCCGAATCCATTTCAGCCCAACAAAGTAGAGATTTCGATCACAAATATCAAAATTATTCATCTGGGGAATCAAATTTCAGGATGCCGCATCTTCTGCAGCAAATTCATCCTCAACCCCATCATTGGCCACTCAAACTTTCGTCTTCCCTCGCATCTTCACGATTTCCTTCCCAATTGCAAGCTTCACTGCCATGGTTTTGCTCCCAGAGTTCCGTCGCCCTTGTTCGTCAACGTCCGGTAACGAGGGGTGCAACCATTCGGTGTATGGCCAATTCACGGAGGGTTAAAATGGTGGCGAAGCAGATTCAGAGGGAGCTTTCCGACATGCTTCTTACTGATAAGGTGTTGCAGTACGCCATTCTTCCTGAGGCCTCTTTGGGAGCGGATAAGTACCTCTCGTCTCTCACCACCATCACCGATGTTGAAGTCTCCGCCGACTTGCAGGTGGTTAAAGTATATGTATCTGTCTTTGGTGATGAAAGAGGAAAGGATGTTGCTATGGCTGGGTTGAAGTCTAAAGCTAAGTATGTTCGAAGTGTATTGGGAAAACGTATGAAGCTTCGGCTAACTCCTGAGATACGTTTTATAGAGGATGAGTCTTTTGAGAGAGGAAGCAGGGTAATTGCCATATTAGATCGGATCAAGGACAAAAAGAAGGATATCGATGATGAAGGCTTTGAGCAATCTGAATTATCCGATGCTTCTCAAGACGACAGGGACTGGGAAGGCGACGATGCTGATGAAGACATAATATATGTACGATAG

Protein sequence

MVGPLARAELGHLLSVPGASSRHGFAWFNPKRLRIAKNPRSTNRPRLPPSSTNLSLVAGEGQICSCCRGFPDMLQRERFMREFAQMPKKRPVTIREKERSTPPYTLLLGLGPLPRLREGLTSPNAEANQRRGPKPVVQRPVVVSQSSEVNPSEKKELKKRILNIAGLTNPKPQKKLIARKSESISAQQSRDFDHKYQNYSSGESNFRMPHLLQQIHPQPHHWPLKLSSSLASSRFPSQLQASLPWFCSQSSVALVRQRPVTRGATIRCMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADLQVVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVIAILDRIKDKKKDIDDEGFEQSELSDASQDDRDWEGDDADEDIIYVR

Homology

[Close]

BLAST of Spg001044 vs. NCBI nr
Match: XP_022948118.1 (probable ribosome-binding factor A, chloroplastic [Cucurbita moschata])

HSP 1 Score: 380.2 bits (975), Expect = 2.4e-101
Identity = 203/227 (89.43%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 208 MPHLLQQIHPQPHHWPLKLSSSLASSRFPSQLQASLPWFCSQSSVALVRQRPVTRGATIR 267
           MPHLLQQIHPQ HH+PLKLSSSLASSRFPSQ  AS P FCS +SVALVR+RPV RGATIR
Sbjct: 1   MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIR 60

Query: 268 CMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADL 327
           CMANSRRVKMV+KQIQRELS+MLLTDKVLQ+AILPEASLGADKYLSSLTTITDVE+S+DL
Sbjct: 61  CMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDL 120

Query: 328 QVVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 387
           QVVKVYVSVFGDERGKD+AMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV
Sbjct: 121 QVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 180

Query: 388 IAILDRIKDKKKDIDDEGFEQSELSDASQDDRDWEGDDADEDIIYVR 435
           IAILDRIKD+K +IDDE  EQSELSDA QDDRDWE DDADEDIIYV+
Sbjct: 181 IAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYVQ 227

[Close]

BLAST of Spg001044 vs. NCBI nr
Match: XP_023006992.1 (probable ribosome-binding factor A, chloroplastic [Cucurbita maxima])

HSP 1 Score: 378.3 bits (970), Expect = 9.2e-101
Identity = 200/227 (88.11%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 208 MPHLLQQIHPQPHHWPLKLSSSLASSRFPSQLQASLPWFCSQSSVALVRQRPVTRGATIR 267
           MPHLLQQIHPQPHH+PLKLSSSLASSRFPSQ   S P FCS +SVALVRQRPV RGATI+
Sbjct: 1   MPHLLQQIHPQPHHFPLKLSSSLASSRFPSQFLTSPPCFCSPNSVALVRQRPVMRGATIQ 60

Query: 268 CMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADL 327
           CMANSRRVKMV+KQIQRELS+MLLTDKVLQ+AILPEASLGADKYLSSLTTITDVE+S+DL
Sbjct: 61  CMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDL 120

Query: 328 QVVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 387
           QVVKVYVSVFGDERGKD+AMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV
Sbjct: 121 QVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 180

Query: 388 IAILDRIKDKKKDIDDEGFEQSELSDASQDDRDWEGDDADEDIIYVR 435
           IAILDRIKD+K +IDDE  E+SELSDA QDDRDWE D+ADEDIIY++
Sbjct: 181 IAILDRIKDEKNNIDDEDMEKSELSDAPQDDRDWEEDEADEDIIYIQ 227

[Close]

BLAST of Spg001044 vs. NCBI nr
Match: KAG6605037.1 (putative ribosome-binding factor A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 377.9 bits (969), Expect = 1.2e-100
Identity = 202/225 (89.78%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 208 MPHLLQQIHPQPHHWPLKLSSSLASSRFPSQLQASLPWFCSQSSVALVRQRPVTRGATIR 267
           MPHLLQQIHPQ HH+PLKLSSSLASSRFPSQ  AS P FCS +SVALVR+RPV RGATIR
Sbjct: 1   MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIR 60

Query: 268 CMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADL 327
           CMANSRRVKMV+KQIQRELS+MLLTDKVLQ+AILPEASLGADKYLSSLTTITDVE+S+DL
Sbjct: 61  CMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDL 120

Query: 328 QVVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 387
           QVVKVYVSVFGDERGKD+AMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV
Sbjct: 121 QVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 180

Query: 388 IAILDRIKDKKKDIDDEGFEQSELSDASQDDRDWEGDDADEDIIY 433
           IAILDRIKD+K +IDDE  EQSELSDA QDDRDWE DDADEDIIY
Sbjct: 181 IAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIY 225

[Close]

BLAST of Spg001044 vs. NCBI nr
Match: XP_023534592.1 (probable ribosome-binding factor A, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 376.3 bits (965), Expect = 3.5e-100
Identity = 200/227 (88.11%), Postives = 214/227 (94.27%), Query Frame = 0


Query: 208 MPHLLQQIHPQPHHWPLKLSSSLASSRFPSQLQASLPWFCSQSSVALVRQRPVTRGATIR 267
           MPHLLQQIHPQ HH+PLKLSSSLASSRFPSQ  AS P FCS +SVA+VR+RPV RG TIR
Sbjct: 1   MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVAVVRRRPVMRGVTIR 60

Query: 268 CMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADL 327
           CMANSRRVKMV+KQIQRELS+MLLTDKVLQ+AILPEASLGADKYLSSLTTITDVE+S+DL
Sbjct: 61  CMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDL 120

Query: 328 QVVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 387
           QVVKVYVSVFGDERGKD+AMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV
Sbjct: 121 QVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 180

Query: 388 IAILDRIKDKKKDIDDEGFEQSELSDASQDDRDWEGDDADEDIIYVR 435
           IAILDRIKD+K +IDDE  EQSELSD+ QDDRDWE DDADEDIIYV+
Sbjct: 181 IAILDRIKDEKNNIDDEDMEQSELSDSPQDDRDWEEDDADEDIIYVQ 227

[Close]

BLAST of Spg001044 vs. NCBI nr
Match: XP_038900542.1 (probable ribosome-binding factor A, chloroplastic [Benincasa hispida])

HSP 1 Score: 369.4 bits (947), Expect = 4.3e-98
Identity = 203/227 (89.43%), Postives = 208/227 (91.63%), Query Frame = 0


Query: 208 MPHLLQQIHPQPHHWPLKLSSSLASSRFPSQLQASLPWFCSQSSVALVRQRPVTRGATIR 267
           MPHLLQQIHPQPH  PLKLSSSL SS FPSQ QAS PWF S SSV L+R  P   GATIR
Sbjct: 1   MPHLLQQIHPQPHLSPLKLSSSLPSSPFPSQFQASRPWFYSPSSVTLLRP-PRMMGATIR 60

Query: 268 CMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADL 327
           CMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADL
Sbjct: 61  CMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADL 120

Query: 328 QVVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 387
           QVVKVYVSVFGDERGKDVA+AGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV
Sbjct: 121 QVVKVYVSVFGDERGKDVAIAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 180

Query: 388 IAILDRIKDKKKDIDDEGFEQSELSDASQDDRDWEGDDADEDIIYVR 435
           IAILDRIKDKKKD DDE FE SELSD  +DDRDW+GDDADEDIIYV+
Sbjct: 181 IAILDRIKDKKKDNDDEDFEPSELSDTLEDDRDWKGDDADEDIIYVQ 226

[Close]

BLAST of Spg001044 vs. ExPASy Swiss-Prot
Match: O65693 (Probable ribosome-binding factor A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g34730 PE=2 SV=2)

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-63
Identity = 145/216 (67.13%), Postives = 168/216 (77.78%), Query Frame = 0


Query: 220 HHWPL-KLSSSLASSRFPSQLQASLPWFCSQSSVALVRQRPVTRGATIRCMANSRRVKMV 279
           HH P+  +SS   +  FP           S + V L     V R  T+RCMAN RRVKMV
Sbjct: 16  HHPPIYTVSSKTQAFHFPQ----------SMAPVNLRTNLSVRR--TVRCMANPRRVKMV 75

Query: 280 AKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADLQVVKVYVSVFG 339
           AKQI RELSDMLLTD VLQ+A+LPEA+LGAD+YLSSLTTI+DVEVS DLQVVKVYVSVFG
Sbjct: 76  AKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVEVSNDLQVVKVYVSVFG 135

Query: 340 DERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVIAILDRIKDKK 399
           D+RGKDVA+AGLKSKAKYVRS LGKRMKLRLTPE+RFIEDE+ ERGSRVIAILD+IK +K
Sbjct: 136 DDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDEAMERGSRVIAILDKIKAEK 195

Query: 400 KDIDDEGFEQSELSDASQDDRDWEGDDADEDIIYVR 435
                 G  ++E SD+++DD+DWE DD DEDIIYV+
Sbjct: 196 ----GSGEGKTEPSDSTEDDQDWEVDDPDEDIIYVK 215

[Close]

BLAST of Spg001044 vs. ExPASy Swiss-Prot
Match: B0JRP8 (Ribosome-binding factor A OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=rbfA PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.4e-21
Identity = 59/140 (42.14%), Postives = 89/140 (63.57%), Query Frame = 0


Query: 269 MANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADLQ 328
           MAN RRV  V+  I+RE+S MLL +            +  D+  + + ++TDV++S DLQ
Sbjct: 1   MANDRRVSRVSSLIKREVSQMLLME------------IKDDRVGAGMVSVTDVDLSHDLQ 60

Query: 329 VVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVI 388
             K++VS++G+E  K   MAGLK+ A +VR  LG+R++LR TPE+ F+ED S ERG R++
Sbjct: 61  HAKIFVSIYGNEDAKAETMAGLKASAGFVRRELGQRIRLRRTPEVVFLEDSSLERGDRML 120

Query: 389 AILDRIKDKKKDIDDEGFEQ 409
            +LD IK  +   DD+  E+
Sbjct: 121 HLLDHIKTDRPPEDDDSEEE 128

[Close]

BLAST of Spg001044 vs. ExPASy Swiss-Prot
Match: Q8Z0M8 (Ribosome-binding factor A OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbfA PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.7e-21
Identity = 57/134 (42.54%), Postives = 86/134 (64.18%), Query Frame = 0


Query: 269 MANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADLQ 328
           MA +RRV  VA+ I+RE+S ML+              +  D+  + + ++TDV+VS DLQ
Sbjct: 1   MATNRRVSRVAELIKREVSQMLIN------------GIKDDRVGTGMVSVTDVDVSGDLQ 60

Query: 329 VVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVI 388
             K+YVS++G E  K   MAGLKS   +VRS LG R++LR TPE+ FIED S ERG++V+
Sbjct: 61  HAKIYVSIYGTEEAKAETMAGLKSATGFVRSELGARVRLRRTPEVTFIEDRSIERGTKVL 120

Query: 389 AILDRIKDKKKDID 403
            +L+++++ +   D
Sbjct: 121 TLLNKLENARSPDD 122

[Close]

BLAST of Spg001044 vs. ExPASy Swiss-Prot
Match: Q3M9Q8 (Ribosome-binding factor A OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rbfA PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 7.5e-21
Identity = 58/135 (42.96%), Postives = 87/135 (64.44%), Query Frame = 0


Query: 269 MANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADLQ 328
           MA +RRV  VA+ I+RE+S ML+              +  D+  + + ++TDV+VS DLQ
Sbjct: 1   MATNRRVSRVAELIKREVSQMLIN------------GIKDDRVGTGMVSVTDVDVSGDLQ 60

Query: 329 VVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVI 388
             K+YVS++G E  K   MAGLKS   +VRS LG R++LR TPE+ FIED S ERG++V+
Sbjct: 61  HAKIYVSIYGTEEAKAETMAGLKSATGFVRSELGARVRLRRTPEVTFIEDRSIERGTKVL 120

Query: 389 AILDRIKDKKKDIDD 404
            +L+++ +  + +DD
Sbjct: 121 TLLNKL-ENARSLDD 122

[Close]

BLAST of Spg001044 vs. ExPASy Swiss-Prot
Match: Q93LL7 (Ribosome-binding factor A OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rbfA PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 9.8e-21
Identity = 62/151 (41.06%), Postives = 89/151 (58.94%), Query Frame = 0


Query: 269 MANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADLQ 328
           MA +RRV  VA+ I+RE+S MLL              +  D+  + + ++TDV+VS DLQ
Sbjct: 1   MATNRRVSRVAELIKREVSQMLLN------------GIKDDRVGTGMVSVTDVDVSGDLQ 60

Query: 329 VVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVI 388
             K+YVS++G +  K   MAGLKS   YVRS LG R++LR TPE+ F+ED S ERG++V+
Sbjct: 61  HAKIYVSIYGTDEAKVETMAGLKSATGYVRSELGARVRLRRTPEVIFLEDRSIERGNKVL 120

Query: 389 AILDRIK-----------DKKKDIDDEGFEQ 409
           A+L ++            +   D DDE F +
Sbjct: 121 ALLSQLNHDRPPENLLAVEDNTDEDDESFSE 139

[Close]

BLAST of Spg001044 vs. ExPASy TrEMBL
Match: A0A6J1G8H2 (probable ribosome-binding factor A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451795 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.2e-101
Identity = 203/227 (89.43%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 208 MPHLLQQIHPQPHHWPLKLSSSLASSRFPSQLQASLPWFCSQSSVALVRQRPVTRGATIR 267
           MPHLLQQIHPQ HH+PLKLSSSLASSRFPSQ  AS P FCS +SVALVR+RPV RGATIR
Sbjct: 1   MPHLLQQIHPQSHHFPLKLSSSLASSRFPSQFLASPPCFCSPNSVALVRRRPVMRGATIR 60

Query: 268 CMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADL 327
           CMANSRRVKMV+KQIQRELS+MLLTDKVLQ+AILPEASLGADKYLSSLTTITDVE+S+DL
Sbjct: 61  CMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDL 120

Query: 328 QVVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 387
           QVVKVYVSVFGDERGKD+AMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV
Sbjct: 121 QVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 180

Query: 388 IAILDRIKDKKKDIDDEGFEQSELSDASQDDRDWEGDDADEDIIYVR 435
           IAILDRIKD+K +IDDE  EQSELSDA QDDRDWE DDADEDIIYV+
Sbjct: 181 IAILDRIKDEKNNIDDEDMEQSELSDAPQDDRDWEEDDADEDIIYVQ 227

[Close]

BLAST of Spg001044 vs. ExPASy TrEMBL
Match: A0A6J1KXB5 (probable ribosome-binding factor A, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499618 PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 4.5e-101
Identity = 200/227 (88.11%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 208 MPHLLQQIHPQPHHWPLKLSSSLASSRFPSQLQASLPWFCSQSSVALVRQRPVTRGATIR 267
           MPHLLQQIHPQPHH+PLKLSSSLASSRFPSQ   S P FCS +SVALVRQRPV RGATI+
Sbjct: 1   MPHLLQQIHPQPHHFPLKLSSSLASSRFPSQFLTSPPCFCSPNSVALVRQRPVMRGATIQ 60

Query: 268 CMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADL 327
           CMANSRRVKMV+KQIQRELS+MLLTDKVLQ+AILPEASLGADKYLSSLTTITDVE+S+DL
Sbjct: 61  CMANSRRVKMVSKQIQRELSNMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEISSDL 120

Query: 328 QVVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 387
           QVVKVYVSVFGDERGKD+AMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV
Sbjct: 121 QVVKVYVSVFGDERGKDIAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 180

Query: 388 IAILDRIKDKKKDIDDEGFEQSELSDASQDDRDWEGDDADEDIIYVR 435
           IAILDRIKD+K +IDDE  E+SELSDA QDDRDWE D+ADEDIIY++
Sbjct: 181 IAILDRIKDEKNNIDDEDMEKSELSDAPQDDRDWEEDEADEDIIYIQ 227

[Close]

BLAST of Spg001044 vs. ExPASy TrEMBL
Match: A0A1S4E1P3 (probable ribosome-binding factor A, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497269 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 2.2e-92
Identity = 196/228 (85.96%), Postives = 204/228 (89.47%), Query Frame = 0


Query: 208 MPH-LLQQIHPQPHHWPLKLSSSLASSRFPSQLQASLPWFCSQSSVALVRQRPVTRGATI 267
           MPH LLQQIHPQ +  PLK SSSL SS FPSQ QAS P F S SSV L+   PV RGATI
Sbjct: 1   MPHLLLQQIHPQFYFSPLKFSSSLQSSPFPSQFQASRPCFYSPSSVNLLPPPPVMRGATI 60

Query: 268 RCMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSAD 327
           RCMANSRRVKMVAKQIQRELSDMLLTDKVLQ+AILPEASLGADKYLSSLTTITDVEVSAD
Sbjct: 61  RCMANSRRVKMVAKQIQRELSDMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEVSAD 120

Query: 328 LQVVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSR 387
           LQVVKVYVSVFGDE+GKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEI FIEDESFERGSR
Sbjct: 121 LQVVKVYVSVFGDEKGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEICFIEDESFERGSR 180

Query: 388 VIAILDRIKDKKKDIDDEGFEQSELSDASQDDRDWEGDDADEDIIYVR 435
           VIAILDRIKDKKKD  DE F++ ELSDA  DDRDW+GDDADEDIIYV+
Sbjct: 181 VIAILDRIKDKKKDTIDEDFDEPELSDALDDDRDWKGDDADEDIIYVQ 228

[Close]

BLAST of Spg001044 vs. ExPASy TrEMBL
Match: A0A5A7TVW4 (Putative ribosome-binding factor A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00030 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 2.2e-92
Identity = 196/228 (85.96%), Postives = 204/228 (89.47%), Query Frame = 0


Query: 208 MPH-LLQQIHPQPHHWPLKLSSSLASSRFPSQLQASLPWFCSQSSVALVRQRPVTRGATI 267
           MPH LLQQIHPQ +  PLK SSSL SS FPSQ QAS P F S SSV L+   PV RGATI
Sbjct: 1   MPHLLLQQIHPQFYFSPLKFSSSLQSSPFPSQFQASRPCFYSPSSVNLLPPPPVMRGATI 60

Query: 268 RCMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSAD 327
           RCMANSRRVKMVAKQIQRELSDMLLTDKVLQ+AILPEASLGADKYLSSLTTITDVEVSAD
Sbjct: 61  RCMANSRRVKMVAKQIQRELSDMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEVSAD 120

Query: 328 LQVVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSR 387
           LQVVKVYVSVFGDE+GKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEI FIEDESFERGSR
Sbjct: 121 LQVVKVYVSVFGDEKGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEICFIEDESFERGSR 180

Query: 388 VIAILDRIKDKKKDIDDEGFEQSELSDASQDDRDWEGDDADEDIIYVR 435
           VIAILDRIKDKKKD  DE F++ ELSDA  DDRDW+GDDADEDIIYV+
Sbjct: 181 VIAILDRIKDKKKDTIDEDFDEPELSDALDDDRDWKGDDADEDIIYVQ 228

[Close]

BLAST of Spg001044 vs. ExPASy TrEMBL
Match: A0A6J1CYL8 (probable ribosome-binding factor A, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015387 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-90
Identity = 190/227 (83.70%), Postives = 199/227 (87.67%), Query Frame = 0


Query: 208 MPHLLQQIHPQPHHWPLKLSSSLASSRFPSQLQASLPWFCSQSSVALVRQRPVTRGATIR 267
           MPHLLQQIHP P+H PLKLSSS      P Q Q   PW  S + +AL+R RPVT GATIR
Sbjct: 1   MPHLLQQIHPHPYHSPLKLSSSTR----PFQFQPPPPWISSPNPIALLRPRPVTGGATIR 60

Query: 268 CMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADL 327
           CMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADL
Sbjct: 61  CMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADL 120

Query: 328 QVVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRV 387
           QVVKVYVSVFGDERGKDVA+AGLKSKAKYVRSVLG+RMKLRLTPEIRFIEDESFERGSRV
Sbjct: 121 QVVKVYVSVFGDERGKDVAIAGLKSKAKYVRSVLGRRMKLRLTPEIRFIEDESFERGSRV 180

Query: 388 IAILDRIKDKKKDIDDEGFEQSELSDASQDDRDWEGDDADEDIIYVR 435
           IAILDRIKD+KKD      E SELS+  QDDRDWEGDDADEDIIYV+
Sbjct: 181 IAILDRIKDEKKDT-----ELSELSNTPQDDRDWEGDDADEDIIYVQ 218

[Close]

BLAST of Spg001044 vs. TAIR 10
Match: AT4G34730.1 (ribosome-binding factor A family protein )

HSP 1 Score: 245.4 bits (625), Expect = 8.7e-65
Identity = 145/216 (67.13%), Postives = 168/216 (77.78%), Query Frame = 0


Query: 220 HHWPL-KLSSSLASSRFPSQLQASLPWFCSQSSVALVRQRPVTRGATIRCMANSRRVKMV 279
           HH P+  +SS   +  FP           S + V L     V R  T+RCMAN RRVKMV
Sbjct: 16  HHPPIYTVSSKTQAFHFPQ----------SMAPVNLRTNLSVRR--TVRCMANPRRVKMV 75

Query: 280 AKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADLQVVKVYVSVFG 339
           AKQI RELSDMLLTD VLQ+A+LPEA+LGAD+YLSSLTTI+DVEVS DLQVVKVYVSVFG
Sbjct: 76  AKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVEVSNDLQVVKVYVSVFG 135

Query: 340 DERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVIAILDRIKDKK 399
           D+RGKDVA+AGLKSKAKYVRS LGKRMKLRLTPE+RFIEDE+ ERGSRVIAILD+IK +K
Sbjct: 136 DDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDEAMERGSRVIAILDKIKAEK 195

Query: 400 KDIDDEGFEQSELSDASQDDRDWEGDDADEDIIYVR 435
                 G  ++E SD+++DD+DWE DD DEDIIYV+
Sbjct: 196 ----GSGEGKTEPSDSTEDDQDWEVDDPDEDIIYVK 215

The following BLAST results are available for this feature:

BLAST of Spg001044 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948118.1	2.4e-101	89.43	probable ribosome-binding factor A, chloroplastic [Cucurbita moschata]	[more]
XP_023006992.1	9.2e-101	88.11	probable ribosome-binding factor A, chloroplastic [Cucurbita maxima]	[more]
KAG6605037.1	1.2e-100	89.78	putative ribosome-binding factor A, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_023534592.1	3.5e-100	88.11	probable ribosome-binding factor A, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_038900542.1	4.3e-98	89.43	probable ribosome-binding factor A, chloroplastic [Benincasa hispida]	[more]

BLAST of Spg001044 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65693	1.2e-63	67.13	Probable ribosome-binding factor A, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
B0JRP8	3.4e-21	42.14	Ribosome-binding factor A OS=Microcystis aeruginosa (strain NIES-843) OX=449447 ...	[more]
Q8Z0M8	5.7e-21	42.54	Ribosome-binding factor A OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576...	[more]
Q3M9Q8	7.5e-21	42.96	Ribosome-binding factor A OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937...	[more]
Q93LL7	9.8e-21	41.06	Ribosome-binding factor A OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) ...	[more]

BLAST of Spg001044 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G8H2	1.2e-101	89.43	probable ribosome-binding factor A, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1KXB5	4.5e-101	88.11	probable ribosome-binding factor A, chloroplastic OS=Cucurbita maxima OX=3661 GN...	[more]
A0A1S4E1P3	2.2e-92	85.96	probable ribosome-binding factor A, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5A7TVW4	2.2e-92	85.96	Putative ribosome-binding factor A OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1CYL8	1.6e-90	83.70	probable ribosome-binding factor A, chloroplastic OS=Momordica charantia OX=3673...	[more]

BLAST of Spg001044 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34730.1	8.7e-65	67.13	ribosome-binding factor A family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000238	Ribosome-binding factor A	PFAM	PF02033	RBFA	coord: 274..391 e-value: 3.9E-27 score: 94.8
IPR000238	Ribosome-binding factor A	TIGRFAM	TIGR00082	TIGR00082	coord: 269..395 e-value: 1.9E-23 score: 81.1
IPR000238	Ribosome-binding factor A	PANTHER	PTHR33515	RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED	coord: 259..433
IPR000238	Ribosome-binding factor A	HAMAP	MF_00003	RbfA	coord: 273..391 score: 22.148361
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 269..385 e-value: 5.0E-35 score: 121.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..427
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..434
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..155
IPR020053	Ribosome-binding factor A, conserved site	PROSITE	PS01319	RBFA	coord: 357..378
IPR023799	Ribosome-binding factor A domain superfamily	SUPERFAMILY	89919	Ribosome-binding factor A, RbfA	coord: 269..394

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg001044.1	Spg001044.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0043024	ribosomal small subunit binding