Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCACAATACTAAAGTTTAGTTGAAAAGCTTCATAATCCAACCATGGCTTCTATATGCTCAAAAGTAATCATTCTCTTCATATTAGCCTACATCTCAACTCTAACCTCTGCCAACAGGCATAAGAGTCCTCGGTTCCGGCTGCTGCCACCATCACCACCCCCATTACGACGACATCCACCACCACCATTACGGCGGCTGCCATCCCCACCCTCACAACGACTGTCACCACCACCACCAAGATGTTGGTCACCAACACCACCATCACGACGGCCACGAACACCACCACCAGGGCGGTTGCCTCCACCACTACCACCGTTGCTGCCGTTGCCACCACCACCATCACGACGGCCTCGAACACCACCACCAGGACGGTTGCCTCCACCACTACCACCCTTGCTGCCGCCGCCACCACCACCATCACGATGGCCTCGAACACCACCGCCTTCACGGAAGGTGCCACCACCACCGCCACCATCATTGTCACCACCGCCGTCACCAACGCCACAAAGTCCAAGAAAGATCATAGTGGGTGGTTCCGAGAATTGGCGCCTTGGCTTTGACTATAACGATTGGGCGCTGAAGAATGGTCCTTTTTATATAAATGATATTCTAGGTAATCTCCTTAAATAAGTTCATTTTCATCATTTATTACTAGAAAATTTCATTCCCAAGCTTATTGAAAGTTTCTTCTTTTCTTTTTGGGAATGGTCTTGACAATCTACAGTCTTCAAGTACGATCCTCCAAGCACTTCAACTCCTCATAGTGTTTATTTGCTACCAAACATGCAAAGCTTCGCCAACTGTGATCTTGGAAGGGCCAAAATGCTAGCAAATTCAACTCAAGGAAGTGGAGATGGGTTTGAGTTTGTGCTCAAACAGCAAAATCCTTACTACTTTGCCTGTGGTGAAGGCAATGGCTTCCATTGCAAAAGTGGATCCATGAAGTTCTCTGTTACACCAATAGTTCAGAGTTGATATTTACAAGGTTTCTTAGAATATATGTTTCTTTTCAATCTTAAAAAGGATGCTGTCAAATAAGACATCTTGCTCTCCCTAAGATGGCAATTGAGCCTATAGTTGTACTCTTTTAGTAAATTGACTTTAATTGTGTTTCAATATTTGGCTATCTTTTTCTTCTTTTTTTTTTTTCACTATATCCAAGTATCTTAATTAAGAACAATGTTT
mRNA sequence
ATGGCTTCTATATGCTCAAAAGTAATCATTCTCTTCATATTAGCCTACATCTCAACTCTAACCTCTGCCAACAGGCATAAGAGTCCTCGGTTCCGGCTGCTGCCACCATCACCACCCCCATTACGACGACATCCACCACCACCATTACGGCGGCTGCCATCCCCACCCTCACAACGACTGTCACCACCACCACCAAGATGTTGGTCACCAACACCACCATCACGACGGCCACGAACACCACCACCAGGGCGGTTGCCTCCACCACTACCACCGTTGCTGCCGTTGCCACCACCACCATCACGACGGCCTCGAACACCACCACCAGGACGGTTGCCTCCACCACTACCACCCTTGCTGCCGCCGCCACCACCACCATCACGATGGCCTCGAACACCACCGCCTTCACGGAAGGTGCCACCACCACCGCCACCATCATTGTCACCACCGCCGTCACCAACGCCACAAAGTCCAAGAAAGATCATAGTGGGTGGTTCCGAGAATTGGCGCCTTGGCTTTGACTATAACGATTGGGCGCTGAAGAATGGTCCTTTTTATATAAATGATATTCTAGTCTTCAAGTACGATCCTCCAAGCACTTCAACTCCTCATAGTGTTTATTTGCTACCAAACATGCAAAGCTTCGCCAACTGTGATCTTGGAAGGGCCAAAATGCTAGCAAATTCAACTCAAGGAAGTGGAGATGGGTTTGAGTTTGTGCTCAAACAGCAAAATCCTTACTACTTTGCCTGTGGTGAAGGCAATGGCTTCCATTGCAAAAGTGGATCCATGAAGTTCTCTGTTACACCAATAGTTCAGAGTTGA
Coding sequence (CDS)
ATGGCTTCTATATGCTCAAAAGTAATCATTCTCTTCATATTAGCCTACATCTCAACTCTAACCTCTGCCAACAGGCATAAGAGTCCTCGGTTCCGGCTGCTGCCACCATCACCACCCCCATTACGACGACATCCACCACCACCATTACGGCGGCTGCCATCCCCACCCTCACAACGACTGTCACCACCACCACCAAGATGTTGGTCACCAACACCACCATCACGACGGCCACGAACACCACCACCAGGGCGGTTGCCTCCACCACTACCACCGTTGCTGCCGTTGCCACCACCACCATCACGACGGCCTCGAACACCACCACCAGGACGGTTGCCTCCACCACTACCACCCTTGCTGCCGCCGCCACCACCACCATCACGATGGCCTCGAACACCACCGCCTTCACGGAAGGTGCCACCACCACCGCCACCATCATTGTCACCACCGCCGTCACCAACGCCACAAAGTCCAAGAAAGATCATAGTGGGTGGTTCCGAGAATTGGCGCCTTGGCTTTGACTATAACGATTGGGCGCTGAAGAATGGTCCTTTTTATATAAATGATATTCTAGTCTTCAAGTACGATCCTCCAAGCACTTCAACTCCTCATAGTGTTTATTTGCTACCAAACATGCAAAGCTTCGCCAACTGTGATCTTGGAAGGGCCAAAATGCTAGCAAATTCAACTCAAGGAAGTGGAGATGGGTTTGAGTTTGTGCTCAAACAGCAAAATCCTTACTACTTTGCCTGTGGTGAAGGCAATGGCTTCCATTGCAAAAGTGGATCCATGAAGTTCTCTGTTACACCAATAGTTCAGAGTTGA
Protein sequence
MASICSKVIILFILAYISTLTSANRHKSPRFRLLPPSPPPLRRHPPPPLRRLPSPPSQRLSPPPPRCWSPTPPSRRPRTPPPGRLPPPLPPLLPLPPPPSRRPRTPPPGRLPPPLPPLLPPPPPPSRWPRTPPPSRKVPPPPPPSLSPPPSPTPQSPRKIIVGGSENWRLGFDYNDWALKNGPFYINDILVFKYDPPSTSTPHSVYLLPNMQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCKSGSMKFSVTPIVQS
Homology
BLAST of Spg000978 vs. NCBI nr
Match:
XP_038902031.1 (extensin-3-like [Benincasa hispida])
HSP 1 Score: 296.2 bits (757), Expect = 2.9e-76
Identity = 203/319 (63.64%), Postives = 218/319 (68.34%), Query Frame = 0
Query: 1 MASICSKVIILFILAYISTLTSA------------NRHKSPRFRLLPPSPPPLRRHPPPP 60
MA I SKVIILFI A STL+SA NR P R PPSPPP RR P PP
Sbjct: 1 MAFIYSKVIILFIWACFSTLSSANVGRFRGYNSTLNRSPPPPLRRFPPSPPPSRRPPTPP 60
Query: 61 LRRLPSPPSQRLSPPPPRCWSPTPPSRRPRTPPPGRLPPP--------------LPPL-L 120
RR P PPS PP R + P PPSRRPRTPP LPPP PPL L
Sbjct: 61 SRRFPPPPSHHPRTPPSRQFPPPPPSRRPRTPPSQWLPPPPRHPRTPPSPRHPRTPPLVL 120
Query: 121 PLPPPPSRRPRTPPPGRLPPPLPPLLPP---------PPPPSRWPRTPPPSRKVPPPPP- 180
PPPPSRR RTPP + PPP PP P PPP SR PRT PPS+K+PPPPP
Sbjct: 121 SSPPPPSRRCRTPPQ-QSPPPSPPSQQPQTPPSPMMSPPPQSRRPRT-PPSQKIPPPPPS 180
Query: 181 -------PSLSPPPS--PTPQSPRKIIVGGSENWRLGFDYNDWALKNGPFYINDILVFKY 240
PSL P PS P PQSPRKIIVGGS+ W+LGFDYNDWALKNGPFY+NDILVFKY
Sbjct: 181 VPSPSPLPSLPPSPSPLPIPQSPRKIIVGGSKQWQLGFDYNDWALKNGPFYVNDILVFKY 240
Query: 241 DPPSTST-PHSVYLLPNMQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEG 273
DPP+TST PHSVY LPNM+SFANCDLG+ KM+AN TQGS DGFEFVLK QNPYYFACGEG
Sbjct: 241 DPPNTSTPPHSVYQLPNMRSFANCDLGKGKMVANITQGSRDGFEFVLKDQNPYYFACGEG 300
BLAST of Spg000978 vs. NCBI nr
Match:
XP_011649199.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >KGN61733.1 hypothetical protein Csa_006192 [Cucumis sativus])
HSP 1 Score: 274.6 bits (701), Expect = 9.0e-70
Identity = 193/306 (63.07%), Postives = 208/306 (67.97%), Query Frame = 0
Query: 1 MASICSKVIILFILAYISTLTSANR-----------------HK---SPRFRLLPPS--- 60
MA I SK+IILFI A ISTL SAN HK P R LPPS
Sbjct: 1 MAFISSKLIILFIWACISTLCSANNGGWFWGRPNCTVSSIPCHKPSLPPPLRRLPPSRYP 60
Query: 61 -PPPLRRHPPPPLRRLPSPPSQR--LSPPPPRCWSPTPPSRRPRTPPPG---RLPPPLPP 120
PP RR PPPP RRL +PPSQR L PPPP PP R PRTPPP R PPP PP
Sbjct: 61 RTPPSRRFPPPPSRRLRTPPSQRCPLLPPPP------PPPRHPRTPPPSRRPRTPPPPPP 120
Query: 121 LLPLPPPPSRRPRTPPPGRLPPPL---PPLLPPPPPPSRWPRTPPPSRKVPPPPPPSLSP 180
+L PPPPS PPP R P P PP P PP P P P PS PP P PSL P
Sbjct: 121 MLSSPPPPSPIVSPPPPQRRPRPRPRPPPFQPIPPSP---PSLPSPS---PPSPSPSLPP 180
Query: 181 PPSPTPQSPRKIIVGGSENWRLGFDYNDWALKNGPFYINDILVFKYDPPSTST-PHSVYL 240
P PTPQSPRKIIVGGS W+LGFDY DWALKNGPFY+NDILVFKYDPP+ ST PH+VYL
Sbjct: 181 SPQPTPQSPRKIIVGGSNQWQLGFDYTDWALKNGPFYVNDILVFKYDPPNRSTPPHNVYL 240
Query: 241 LPNMQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCKSGSMKFSV 274
LPNM+S ANCD G+AK+LAN TQGSGDGFEFVLK QNPYYFACGEGNGFHCK GSMKF++
Sbjct: 241 LPNMRSLANCDFGKAKVLANITQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTL 294
BLAST of Spg000978 vs. NCBI nr
Match:
XP_023007476.1 (extensin-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 252.7 bits (644), Expect = 3.7e-63
Identity = 164/244 (67.21%), Postives = 174/244 (71.31%), Query Frame = 0
Query: 34 LPPSPPPLRRHPP---PPLRRLPSPPSQRLSPPPPRCWSPTPPSRRPRTPPPGRLPPPLP 93
LPPS PP R PP PPL P PPS+R PPPR PPS+RPR PPP ++PP
Sbjct: 245 LPPSRPP-RIPPPRHVPPL--FPPPPSKRPRIPPPR--QVPPPSKRPRIPPPRQVPP--- 304
Query: 94 PLLPLPPPPSRRPRTPPPGRLPPPL-PPLLPPPPPPSRWPRTPPPSRKVPPPPPPSLSPP 153
P PPPPS+RPR PPP +PPPL PP LPP P PS PS SPP
Sbjct: 305 ---PSPPPPSKRPRIPPPRPMPPPLSPPSLPPSPSPS-----------------PSPSPP 364
Query: 154 PSPTPQSPRKIIVGGSENWRLGFDYNDWALKNGPFYINDILVFKYDPPSTSTPHSVYLLP 213
PSPTPQ PRKIIVGGSE WRLG DYNDWALKNGPFY+NDILVFKYDP HSVYLLP
Sbjct: 365 PSPTPQIPRKIIVGGSERWRLGSDYNDWALKNGPFYLNDILVFKYDP-----SHSVYLLP 424
Query: 214 NMQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCKSGSMKFSVTP 273
NMQS +CD G AKM+AN TQGSGDGFEFVL QQNPYYFACGEGNGFHCK GSMKFSVTP
Sbjct: 425 NMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNQQNPYYFACGEGNGFHCKLGSMKFSVTP 455
BLAST of Spg000978 vs. NCBI nr
Match:
XP_023533130.1 (extensin-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 251.5 bits (641), Expect = 8.2e-63
Identity = 173/287 (60.28%), Postives = 192/287 (66.90%), Query Frame = 0
Query: 28 SPRFRLLPPS--PPPLRRHPPPPLRRL----PSPPSQRLSPPPPRCW---SPTPPSRRPR 87
S R R+ PP PPP +R PP R + P PPS+R PPPR SP PPS+RPR
Sbjct: 261 SKRPRIPPPRHVPPPSKRPRIPPPRHVPPPSPPPPSKRPRIPPPRQVPPPSPPPPSKRPR 320
Query: 88 TPPPGRLPPPLPP--------------LLPLPPPPSRRPRTPPPGRLPPPLP------PL 147
PPP ++PPP PP P PPPPS+RPR PPP ++PPP P P
Sbjct: 321 IPPPRQVPPPSPPPPSKRPRIPPPRQVPPPSPPPPSKRPRIPPPRQVPPPSPPPPSKQPR 380
Query: 148 LPP--------PPPPSRWPRTPPPSRKVPPPPPPSLSPPPSPT----PQSPRKIIVGGSE 207
+PP PPPPS+ PR PPP + P P PPS SP PSP+ PQ PRKIIVGGSE
Sbjct: 381 IPPPRQVPPPSPPPPSKQPRIPPPRQMPPSPSPPSPSPSPSPSPSPNPQIPRKIIVGGSE 440
Query: 208 NWRLGFDYNDWALKNGPFYINDILVFKYDPPSTSTPHSVYLLPNMQSFANCDLGRAKMLA 267
WRLGFDYNDWALKNGPFY+NDILVFKYD HSVYLLPNMQS +CD G AKM+A
Sbjct: 441 RWRLGFDYNDWALKNGPFYLNDILVFKYD-----RTHSVYLLPNMQSLVDCDFGTAKMVA 500
Query: 268 NSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCKSGSMKFSVTPIVQS 274
N TQGSGDGFEFVL QNPYYFACGEGNGFHCK GSMKFS+TPI Q+
Sbjct: 501 NLTQGSGDGFEFVLNHQNPYYFACGEGNGFHCKLGSMKFSLTPIAQA 542
BLAST of Spg000978 vs. NCBI nr
Match:
XP_022947105.1 (extensin-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 250.4 bits (638), Expect = 1.8e-62
Identity = 160/235 (68.09%), Postives = 171/235 (72.77%), Query Frame = 0
Query: 47 PPLRRLPSPPSQRLSP--PPPRCWSPTPPSRRPRTPPPGRLPPPLPPLLPLPPPPSRRPR 106
P R LPSPP P PPPR PPS+RPR PPP ++PPPL P PPPPS+RPR
Sbjct: 245 PQSRCLPSPPPPSRPPRIPPPR--HVPPPSKRPRIPPPRQVPPPLS---PSPPPPSKRPR 304
Query: 107 TPPPGRLPPPLP------PLLPPPPPPSRWPRTPPPSRKVPPPPPPSLSPPPSPTPQSPR 166
PPP ++PP P P +PPP P P PPPS P P PS SPPPSPTPQ PR
Sbjct: 305 IPPPRQVPPSSPPPPSKRPRIPPPRPMPPQPMPPPPSLPPSPSPSPSPSPPPSPTPQIPR 364
Query: 167 KIIVGGSENWRLGFDYNDWALKNGPFYINDILVFKYDPPSTSTPHSVYLLPNMQSFANCD 226
KIIVGGSE WRLGFDYNDWALKNGPFY+NDILVFKYD HSVYLLPNMQS +CD
Sbjct: 365 KIIVGGSEQWRLGFDYNDWALKNGPFYLNDILVFKYD-----RTHSVYLLPNMQSLVDCD 424
Query: 227 LGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCKSGSMKFSVTPIVQS 274
G AKM+AN TQGSGDGFEFVL QQNPYYFACGEGNGFHCK GSMKFSVTPI Q+
Sbjct: 425 FGTAKMVANLTQGSGDGFEFVLNQQNPYYFACGEGNGFHCKLGSMKFSVTPIAQA 469
BLAST of Spg000978 vs. ExPASy TrEMBL
Match:
A0A0A0LIT9 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G234585 PE=4 SV=1)
HSP 1 Score: 274.6 bits (701), Expect = 4.4e-70
Identity = 193/306 (63.07%), Postives = 208/306 (67.97%), Query Frame = 0
Query: 1 MASICSKVIILFILAYISTLTSANR-----------------HK---SPRFRLLPPS--- 60
MA I SK+IILFI A ISTL SAN HK P R LPPS
Sbjct: 1 MAFISSKLIILFIWACISTLCSANNGGWFWGRPNCTVSSIPCHKPSLPPPLRRLPPSRYP 60
Query: 61 -PPPLRRHPPPPLRRLPSPPSQR--LSPPPPRCWSPTPPSRRPRTPPPG---RLPPPLPP 120
PP RR PPPP RRL +PPSQR L PPPP PP R PRTPPP R PPP PP
Sbjct: 61 RTPPSRRFPPPPSRRLRTPPSQRCPLLPPPP------PPPRHPRTPPPSRRPRTPPPPPP 120
Query: 121 LLPLPPPPSRRPRTPPPGRLPPPL---PPLLPPPPPPSRWPRTPPPSRKVPPPPPPSLSP 180
+L PPPPS PPP R P P PP P PP P P P PS PP P PSL P
Sbjct: 121 MLSSPPPPSPIVSPPPPQRRPRPRPRPPPFQPIPPSP---PSLPSPS---PPSPSPSLPP 180
Query: 181 PPSPTPQSPRKIIVGGSENWRLGFDYNDWALKNGPFYINDILVFKYDPPSTST-PHSVYL 240
P PTPQSPRKIIVGGS W+LGFDY DWALKNGPFY+NDILVFKYDPP+ ST PH+VYL
Sbjct: 181 SPQPTPQSPRKIIVGGSNQWQLGFDYTDWALKNGPFYVNDILVFKYDPPNRSTPPHNVYL 240
Query: 241 LPNMQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCKSGSMKFSV 274
LPNM+S ANCD G+AK+LAN TQGSGDGFEFVLK QNPYYFACGEGNGFHCK GSMKF++
Sbjct: 241 LPNMRSLANCDFGKAKVLANITQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTL 294
BLAST of Spg000978 vs. ExPASy TrEMBL
Match:
A0A6J1L0M6 (extensin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1)
HSP 1 Score: 252.7 bits (644), Expect = 1.8e-63
Identity = 164/244 (67.21%), Postives = 174/244 (71.31%), Query Frame = 0
Query: 34 LPPSPPPLRRHPP---PPLRRLPSPPSQRLSPPPPRCWSPTPPSRRPRTPPPGRLPPPLP 93
LPPS PP R PP PPL P PPS+R PPPR PPS+RPR PPP ++PP
Sbjct: 245 LPPSRPP-RIPPPRHVPPL--FPPPPSKRPRIPPPR--QVPPPSKRPRIPPPRQVPP--- 304
Query: 94 PLLPLPPPPSRRPRTPPPGRLPPPL-PPLLPPPPPPSRWPRTPPPSRKVPPPPPPSLSPP 153
P PPPPS+RPR PPP +PPPL PP LPP P PS PS SPP
Sbjct: 305 ---PSPPPPSKRPRIPPPRPMPPPLSPPSLPPSPSPS-----------------PSPSPP 364
Query: 154 PSPTPQSPRKIIVGGSENWRLGFDYNDWALKNGPFYINDILVFKYDPPSTSTPHSVYLLP 213
PSPTPQ PRKIIVGGSE WRLG DYNDWALKNGPFY+NDILVFKYDP HSVYLLP
Sbjct: 365 PSPTPQIPRKIIVGGSERWRLGSDYNDWALKNGPFYLNDILVFKYDP-----SHSVYLLP 424
Query: 214 NMQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCKSGSMKFSVTP 273
NMQS +CD G AKM+AN TQGSGDGFEFVL QQNPYYFACGEGNGFHCK GSMKFSVTP
Sbjct: 425 NMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNQQNPYYFACGEGNGFHCKLGSMKFSVTP 455
BLAST of Spg000978 vs. ExPASy TrEMBL
Match:
A0A6J1G5X5 (extensin-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1)
HSP 1 Score: 250.4 bits (638), Expect = 8.8e-63
Identity = 160/235 (68.09%), Postives = 171/235 (72.77%), Query Frame = 0
Query: 47 PPLRRLPSPPSQRLSP--PPPRCWSPTPPSRRPRTPPPGRLPPPLPPLLPLPPPPSRRPR 106
P R LPSPP P PPPR PPS+RPR PPP ++PPPL P PPPPS+RPR
Sbjct: 199 PQSRCLPSPPPPSRPPRIPPPR--HVPPPSKRPRIPPPRQVPPPLS---PSPPPPSKRPR 258
Query: 107 TPPPGRLPPPLP------PLLPPPPPPSRWPRTPPPSRKVPPPPPPSLSPPPSPTPQSPR 166
PPP ++PP P P +PPP P P PPPS P P PS SPPPSPTPQ PR
Sbjct: 259 IPPPRQVPPSSPPPPSKRPRIPPPRPMPPQPMPPPPSLPPSPSPSPSPSPPPSPTPQIPR 318
Query: 167 KIIVGGSENWRLGFDYNDWALKNGPFYINDILVFKYDPPSTSTPHSVYLLPNMQSFANCD 226
KIIVGGSE WRLGFDYNDWALKNGPFY+NDILVFKYD HSVYLLPNMQS +CD
Sbjct: 319 KIIVGGSEQWRLGFDYNDWALKNGPFYLNDILVFKYD-----RTHSVYLLPNMQSLVDCD 378
Query: 227 LGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCKSGSMKFSVTPIVQS 274
G AKM+AN TQGSGDGFEFVL QQNPYYFACGEGNGFHCK GSMKFSVTPI Q+
Sbjct: 379 FGTAKMVANLTQGSGDGFEFVLNQQNPYYFACGEGNGFHCKLGSMKFSVTPIAQA 423
BLAST of Spg000978 vs. ExPASy TrEMBL
Match:
A0A6J1G5W9 (extensin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1)
HSP 1 Score: 250.4 bits (638), Expect = 8.8e-63
Identity = 160/235 (68.09%), Postives = 171/235 (72.77%), Query Frame = 0
Query: 47 PPLRRLPSPPSQRLSP--PPPRCWSPTPPSRRPRTPPPGRLPPPLPPLLPLPPPPSRRPR 106
P R LPSPP P PPPR PPS+RPR PPP ++PPPL P PPPPS+RPR
Sbjct: 245 PQSRCLPSPPPPSRPPRIPPPR--HVPPPSKRPRIPPPRQVPPPLS---PSPPPPSKRPR 304
Query: 107 TPPPGRLPPPLP------PLLPPPPPPSRWPRTPPPSRKVPPPPPPSLSPPPSPTPQSPR 166
PPP ++PP P P +PPP P P PPPS P P PS SPPPSPTPQ PR
Sbjct: 305 IPPPRQVPPSSPPPPSKRPRIPPPRPMPPQPMPPPPSLPPSPSPSPSPSPPPSPTPQIPR 364
Query: 167 KIIVGGSENWRLGFDYNDWALKNGPFYINDILVFKYDPPSTSTPHSVYLLPNMQSFANCD 226
KIIVGGSE WRLGFDYNDWALKNGPFY+NDILVFKYD HSVYLLPNMQS +CD
Sbjct: 365 KIIVGGSEQWRLGFDYNDWALKNGPFYLNDILVFKYD-----RTHSVYLLPNMQSLVDCD 424
Query: 227 LGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCKSGSMKFSVTPIVQS 274
G AKM+AN TQGSGDGFEFVL QQNPYYFACGEGNGFHCK GSMKFSVTPI Q+
Sbjct: 425 FGTAKMVANLTQGSGDGFEFVLNQQNPYYFACGEGNGFHCKLGSMKFSVTPIAQA 469
BLAST of Spg000978 vs. ExPASy TrEMBL
Match:
A0A6J1D4K0 (leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111017245 PE=4 SV=1)
HSP 1 Score: 241.5 bits (615), Expect = 4.1e-60
Identity = 173/273 (63.37%), Postives = 189/273 (69.23%), Query Frame = 0
Query: 29 PRFRLLPPSPPPLRRHPPPP---LRRLPSPP---SQRLSPPPP----RCWSPTPP---SR 88
P L PP P RR PPPP RR P PP ++R PPPP R + P PP +R
Sbjct: 72 PSLPLPPPPQPKTRRFPPPPQPKSRRFPPPPQPKTRRFPPPPPQPKTRLFQPPPPQPKTR 131
Query: 89 RPRTPPPGRL--PPPLPPLLPLPPPPSRRPRTPPPGRLPPPLPP-----LLPPPPPPS-- 148
R PPP L P PLP LLP PPPP P PP LP P PP PPPPP S
Sbjct: 132 RSPPPPPSSLLPPSPLPSLLPPPPPP---PPPLPPSPLPSPPPPQPKTRRSPPPPPQSKT 191
Query: 149 RWPRTPPPSRKVPPPP---PPSLSPPPS--PTPQSPRKIIVGGSENWRLGFDYNDWALKN 208
R PPP +PPPP PPSL PPPS P PQSPRKIIVGGSENW LGFDY++WALKN
Sbjct: 192 RPSPPPPPPSPLPPPPLPSPPSLPPPPSSRPPPQSPRKIIVGGSENWHLGFDYSNWALKN 251
Query: 209 GPFYINDILVFKYDPPSTST-PHSVYLLPNMQSFANCDLGRAKMLANSTQGSGDGFEFVL 268
GPF++NDILVFKYDPP+ +T PHSVYLL NMQSF+NCDL RA LAN TQG+GDGF+FVL
Sbjct: 252 GPFFLNDILVFKYDPPTGATVPHSVYLLSNMQSFSNCDLRRATKLANWTQGNGDGFQFVL 311
Query: 269 KQQNPYYFACGEGNGFHCKSGSMKFSVTPIVQS 274
KQQ YYFACGEGNGFHCK+GSMKFSVTPI+QS
Sbjct: 312 KQQKTYYFACGEGNGFHCKNGSMKFSVTPILQS 341
BLAST of Spg000978 vs. TAIR 10
Match:
AT2G15780.1 (Cupredoxin superfamily protein )
HSP 1 Score: 159.5 bits (402), Expect = 3.9e-39
Identity = 70/119 (58.82%), Postives = 89/119 (74.79%), Query Frame = 0
Query: 153 TPQSPRKIIVGGSENWRLGFDYNDWALKNGPFYINDILVFKYDPPSTSTPHSVYLLPNMQ 212
T PRKIIVGG + W GF+Y DWA K PF++NDILVFKY+PP+ T HSVYLLPN
Sbjct: 137 TYNGPRKIIVGGDKEWTYGFNYADWASKTAPFFLNDILVFKYNPPAPFT-HSVYLLPNPS 196
Query: 213 SFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCKSGSMKFSVTPIV 272
S+ CD+ + KM+A+ QG+G GFEFVLKQ PYY +CGE +G HC +G+MKF+V P++
Sbjct: 197 SYEKCDVKKGKMIASPKQGAGKGFEFVLKQMKPYYISCGEHDGAHCSNGTMKFTVMPML 254
BLAST of Spg000978 vs. TAIR 10
Match:
AT2G15770.1 (Cupredoxin superfamily protein )
HSP 1 Score: 132.5 bits (332), Expect = 5.2e-31
Identity = 55/117 (47.01%), Postives = 84/117 (71.79%), Query Frame = 0
Query: 155 QSPRKIIVGGSENWRLGFDYNDWALKNGPFYINDILVFKYDPPSTSTPHSVYLLPNMQSF 214
++P+KIIVGGS+ W+ G DY DWA KN PFY+ND+LVFKYD S ++VYL + S+
Sbjct: 141 ETPKKIIVGGSDGWKKGLDYKDWASKNAPFYVNDVLVFKYD-KSAKRRNNVYLFKDRWSY 200
Query: 215 ANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCKSGSMKFSVTPIV 272
NCD+ A+ + ++ +GS + F F LK+ PY+FA GE +G +C++ +MKF++ P++
Sbjct: 201 MNCDIKNARKIGSTRKGSEESFNFTLKKIQPYFFASGEHDGDYCRNHNMKFTIFPVL 256
BLAST of Spg000978 vs. TAIR 10
Match:
AT5G19810.1 (Proline-rich extensin-like family protein )
HSP 1 Score: 43.1 bits (100), Expect = 4.1e-04
Identity = 73/167 (43.71%), Postives = 84/167 (50.30%), Query Frame = 0
Query: 1 MASICSKVIILFILAYISTLTSANRHK---------SPRFRLLPPSPPPLRRHPPPPLRR 60
M S +I+LF+LA + T+ + N ++ +P L PP PP PPPP+
Sbjct: 1 MVSRRFSLILLFLLATLITVANGNNNRKLLTSAPEPAPLVDLSPPPPPVNISSPPPPVNL 60
Query: 61 LPSPPSQRLSPPPPRCWSPTPPSRRPRTPPPGRLPPPLPPLLPLPPPPSRRPRTPPPGRL 120
P PP LSPPPP P + P PP PPP P LL PPPP PPP L
Sbjct: 61 SPPPPPVNLSPPPP------PVNLSPPPPPVNLSPPPPPVLLSPPPPPVNLSPPPPPVNL 120
Query: 121 PPPLPP-LLPPPPPPSRWPRTPPPSRKVPPPPPPSLSPPPSPTPQSP 158
PP PP LL PPPPP PPP PPPPP LSPPP P SP
Sbjct: 121 SPPPPPVLLSPPPPPVLLSPPPPPVNLSPPPPPVLLSPPPPPVLFSP 161
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LIT9 | 4.4e-70 | 63.07 | Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G234585... | [more] |
A0A6J1L0M6 | 1.8e-63 | 67.21 | extensin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1 | [more] |
A0A6J1G5X5 | 8.8e-63 | 68.09 | extensin-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1 | [more] |
A0A6J1G5W9 | 8.8e-63 | 68.09 | extensin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1 | [more] |
A0A6J1D4K0 | 4.1e-60 | 63.37 | leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LO... | [more] |