Spg000842 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg000842
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold8: 38408477 .. 38415687 (-)
RNA-Seq ExpressionSpg000842
SyntenySpg000842
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTCTGCCCGTTCCAGTTTTGTTTCCGTCGTTGTGATGATGGAGTTCAAACAGGGGAATGGAGAAAAAAAAGAAAAGGAGAAGAAAGAAAGAAAGTGGAAGAATTTTTTTTTTTAAAAAAAAAGTCCGCCGGCGACCACCGTCGCCGGCGGACGGCAGCGGTGGCCGGTGATGCCGCCGGTAATTACAGATGGTGGCTGGGTAATGGCTGGATGGTAGGTGGATGGTGGTGAAAAAGAATAAGGTAGGAGAAAGAAAAAGTAATTAAAATAATAATAGAATAATAAAAAATAATAATATTTTATTGTTTTTATTTTAAAATAAATTTTTTTTTTTAATTAAAAAAATATTGCCACGTCAGCATTCCGTTAGTATTTAACGGCAAAATGGATGGCAGGGACCAAATTGCTCCTATCTCAAACTTCAGGGGTAATTTTGTTGAGTTTTAAAACTCAGGACCAAAATGTAACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCAATATTCTTCTAAAAAAAAAGTGATATAAATATATATCATTATTAGCTTTAAACTTTTTTTTCCTTTTTGTTTTTATTTAACAGGTCAATACTTTAATAATAGCAAAAGAGGATTGGGTTCCAATCCATAAAATTAGTTTGTATTTAAACCTCTTTGTAATTGACCATATTAAATCTTTGAGGGAATCTGTGTTGAAATGTTTAGAAGTGGCCCTTTTGGACACTTTTAAGATTTAAAAATGAAAAAAGTCCCATTACAACTCATTACACACCTCATTAGGAGGTTGTGTTTTTCCCCTAAACATAATGCTATTGTCTTCAACCTTGAGGGCAATGTGATAGAATTCGGGGAAAGAATTTTCAATTATCACTGGATTAAATTGTAATCCATTTCCTGTAGAAAACATTGATGATGGAGATGCGTTAGAGTCTGAAATAAAAAAAAACTTTCTTCAAACATAAAGACTCACTCGATAGAAGGGACTTAGGCACGGGGTTCAGTATCTGTCAGAGCCTTTAATTAGAAGATTCTTTAGTTGTCAAATTTTAATCTTTATATTTACTAGAATGTCTTCTAGTACCAAAACAACCTCACAATAGAATAAGTTGGAGGCATGTAAAATTGTTTGACAATAAAGAATCGATTCAAAATTATCCATGGGAGAGGTTTCTTATGAACTAACTGTACAATATATAAAAAAGGTCTAAAAAAATATCTCGGGATCCATCTATCTCCAAGGATTTCCAATAGTTATTGGGCATTGGAAATCATTCCAAAATTGTCCGAGGAAAGCTTAGGATTTGCTAGAAGAATCCAAAGCCCCACCCCCACCCCCAACCCACGGATTGCTCAATGGGAGATGTTCGACACGCTTGATTGGAGTGACTTGGATGAAAATATCTTCTCGACTGAAGATGTAAGGTGGTTACTTTTTAATTCTTATTCTATCATAGATTCTATCACTTCTATCAGTGGTAAAATTCTATCACCGATAGATTCTATCAGTTCTATCACTGATAGGATTCAATCAGTGATGAGAACAATAAAAATTAATGAGAATAATATATTGATATGAAAAAAACTGATTTTTAAAAACATGATAACTTTACCTCTTTTTCTCTAGTAGCAGCATATGAGGTTGCATTATCAACAATCCTGTCAATGTGGTCTTCTGCATTGACAACATTTTCAGCAACATCTACAAATTGCTCAGCTGCATTTATAAATTCTAGTTTTTCGAGACTAGAAGTTGGAGGACAATTTTTGTGAAGAGATTTCTGAGATTGTTTTTCCGAAATATCTTTTGGTGGAAATTTGTCTGTGACAATTTCCACCAAATTATTTAACAATCTCAGAATCTCTTTTTGCCCATTTTTTAGTTCCTTTTGTCCTTCATTCAAATATTTGATATCATGTTCTAAGATTAATATCCTTTCTTTTTCTTTTTCATTCTTTTCTTGTTCTTCTCTTTTTCTTTTTTCTTGTTATTCCTTTTCTTCTCTTTTTCTTTTTTCTTCTTCTTCCTTCTGTCTCTTCTTTTCCATTTCAATTTTTTCTCTTTACAACCTTTCCTCCTTCTCCTTCTTCATTTCTGGATGAAATATTCCATATTTTTTGATGTCATTTCTGCATCAATTGGCACTAATGGCACAACAGAGAACTGAAATAAAAAAAAAAAATTAGAATGTTCTATTAGTGATAGTTCTATCAGAGTTCTATCTCAGTGAATAGAATTCTATCACCGATAGATTCTATCAGTCAGTGATAGAATTCTATCATCGATTGAATTCTATTCACTGAGATAGAACTCTGATAAAACTATCTTTGATAGAACATTCTAATTTTTTTTTTATTTTTTTTTATTTCAGTTCTTTGTTGTGCCATTAGTGCCAACTGACGCAGAAATGACATAAAAAAATATGGAATATTTCATCCAAGAAATGGAGAAAGAGGATGAAAGATTGGAAAGAGAAAAAATTGAAATGGAAAAGAAGAGACAGAAGGAAGAAGAAGAAAAAAGAAAAAGAGAAGAAAAGGAAGAAGAAGAAAAAAGAAAAAGAGAAGAACAAGAAAAAAGAGAACAAGAAAAGAATGAGAAAGAAAAAGAAAAGATATTAATCTTAGAACATGATATCAAATATTTGAATGAAGGACAAAAGGAACTAAAAAATGGGCAAAAAGAGATTCTGAGATTGTTAAATAATTTGGTGGAAATTGTCACAGACAAATTTACACCAAAAGATATTTCGGAAAAACAATCTCAAGAATCTCTTCACAAAAATTGTCCTCCAACTTCTAGTCTCGAAAAACTAGAATTTATAAATGCAGCTGAGCAATTTGTAGATGTTGCTGAAAATGTTGTCAATGCAGAAGACCACATTGACAACATTGACAGGATTGTTGATAATGCAACCTCATATGTTGCTACTAGAGAAAAAGAGGTAAAGTTATCATGTTTTTAAAAATCAATTTTTTTCATATCAATATATTATTCTCATTAATTTTTATTGTTCTCATCACTGATTGAATTCTATCAGTGATAGAACTGATAGAATCTATCGGTGATAGAATTCTACCACTGATAGAAGTGATAGAATCTATGATTGAATAAGAATTAAAAAGTAACCACCTTACATCTTCAGTCGAGAATATATTTTCATCCAAGTCACTCCAATCAAGCGTGTCGAGCATCTCCCATTGAGCAATCTGTGGGGTGGGGGTGGGGCTTTGGATTCTTCTAGCAAATCCTAAGCTTTCCTCGGACAGTTTTGGAATGATTTCCAATGCCCAATAACTATTGGAAATCCCTGGAGATAGATGGATCCCGAGATATTTTTTGAGGCCTTTTTTATATATTCTACAGTTAGTTCATAAGACAATCTCCCCCATGGATAATTTTGAATCGATTCTTCATTGTCAAACAATTTTACATGCCTCCAACTTATCCTATTGTGAGGTTGTTTTGGTACTAGAAGACATTCTAGTAAATAAAAAGATGAAAATTTGACAACTAAAGAATCTTCTAATGGAAGGCTCTGACAGATACTGAACCCCGTGCCTAAGTCCCTTCTATCGAGTGAGTCTTTATGTTTGAAGAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTCAGACTCTAACGCATCCCCATCATCAATGTTTTCTAGAGGAAATGGATTATAATTTAATCCAGTGATAATTGAAAATTCTTTCAACCCGAATTCTATCACATTGCCCTCAAGGTTGAGGACAATGACATTATGTTTAGGGGAAAAACACAACCTCCTAATGAGGTGTGTAATGAGACTTTTTTCATTTTTAAGTCTAAAAAGTGTCCAAAAGGGCCACTTCTAAACATTTCAACACAAGATTCCCTCAAAGATTTAATATGGTCAATTATAGAGAGGTTTAAATACAAACTAATTTTATGGATTGGAACCCATTCCTCTTTTGCCATTATTAAAGTATTGACATTTTAAATAAAAACAAAAAGGGAAAAAATGTTTAAAGCTAATAATGATATATATTTATATCACCTTTTTTTTTGAGAAGAATATTTATATCACTTGATAGAATCTATCACTGATAGAATGGAATCTATCACTGATAGAATCTATTATAGAAATCTACCAACCTTCTTCTGTTTCTTCTTTTTGGAGTCCTCCCCTTTGTATTTTAATTTTCTTTTTGTGCTTTTCTCGTCATGTTCATAATCTAGTTTTTAGTTCTTCATCTAAAAAAACAAGATAAAAAAAAATGAGTGATATAACAATACAACTAAAACACCGAACACTGATAGGATAGAAGTGATAGAAAATCTTTATATCATTGATAAAATCTATCTATCAGTGATAGAAAGTCTATCTATTAGTGATAGAAAGACTTACTATCACTGATAGAAAGTTTTTCTATCACTGATCGATTGTTTTTCTATTACTGATAGAATCTATCAGTGATAGAAAGTTTCTATCACTGATAGAAAGTCACTGATGAAAACACAACAACAACCAAATATCAGTGATAGAAAGACAACAACAACCAAACAGCTTGTAGAAAACCTAAGAAAACAACACGATATTAGAACACCAACACTTATAGAGAACAATAGTGATAGAAAGCGAAATGCAAATACAATCTAAAACAACAACATCAACTGGCAAAATGAATCAACTGATAGAAATCGAAGAAAAAAAAAGAAAAAGAGGGAGCGAAAACAAACTTGATTCGAAAATGTAAAATCGCGCAAACGATAGAATCGGAAGAACGTGAAAATAAACCTCGATCAAGCCCTGATAGAATCAAAATAGAGAAGAATCAACAACAAATGAACTGATAGAAATCAAAGAAAAAAAAGAGTCAGCAAAAACAAACCTGAAGACGAACGATAGAAATTGAAACCGATCAAAAAGAATCGACTGATAACCGAGAAAATGAACTGAACTTTGAGAAGACCAGAGATGGAGAAGACGAACGCAAAGAAGATGAAATGTATTCAGATGGAGACGACGAACGAGAAATAGATAGAAAGAAATGAGAAAGATGAAATGCACGAGAATGAATTTCGTGGGTTCAGGGGTTTAGGAAAGGCATTTTAGTAAATTTACGTTTCAGATGTTGAGATTTTGCCATTTTTGCAAATAGTTTTGCGGGCCGCTACATTTGCAATTATTTTGGGCCAGTTTGCTACTTTTGCTGTAACGCCCCGCGTTTTGAAATCAAGCCATTTTAGAGAATTGTTGAGCATTATTATTCTAATTTGGATAATTAGAATTTAAGCTTAGCCTTGGGTCGTTAAATTAAATTTCTATAATTTAGGGAAAATTTTTTTTTAATTAAATCCTTAATTTCCTATAGTTTGGAGGTTTAATATTCGATATTTATTTTAATTATCAAAAGACCCAAATCCTTAATCAATTGAGTTATTTCTTCCCAAATTCTGTAGGAGCTAAGATTGAGTTTAAAATTAAACCTTAGATGAGCCCTAAATCCTACTTAAGATGGGATTTCATTCTTAGGGTTTATTTAAAAGAAAATAAATCAAAAAAAGAAAACCCACATCCCTTCTCTCTCTCTCAAACTCGCGTGCAGCAGACCCCCCCCCTCTCTGCATTTTTTTCTAGCCGCCGGCCATCACCCACGAATCGCCAGAGTTCTGACCGCCGCCGTCATCGAGCAGCGCCGCCCATGAGTCGTTCCGTCGTGTAGCCTTCGCGCCGCCCTCGTTCGCGCGGATCTCTCTCTCTCTTTCGCAACTCTCTCTCTCTCGTTGGTCTCTCTCCTTCTCGAGTCGCCTCGCCCGTCCAGCCGCTGCCGCTGCAACAAGGTGTGTCGCCGCCGCCGCTTCACCGCTGTTCGGATCTGCGGTTTTAGGTTCGTTTCTTGTGGCATTTCGCCAAGAAGAGAATAAACTCGTGGGTAAGCTTCTTTCCTTCCCATTCCTTGTGATTTTAGGCCGATCTAAGGTTCCCTTGTTCTATTTTGGTTAGATTTTGCATGACCAGCCTTTCGGAGTGTCTTGTTCTCGCGTTTTTGCCTCTGTCCAGCAACATTCTTGGGTGTTTCCGGCAATGATTGGCAGTTCCGGTAAGTTTAGGCACTTACCTATTCTTGGTTAGTGCTAGAACTAAAATGCCCAATGGTTTATGTGCTGGAAATTTAGTTTAGTGATGAGTTTCTATTCTGCAGCGCCGTCTAAGTGATCGATTGGGTTCGAATCACTGTAAACTTGAATACCCACTGCCCAAGGATCGTTCTAGTGCGTTGTTCGAGGTTATTATAACCCGTCTTGCGTGAAATCGGGTCCGTTGGGTAAGGTTCAATGCTGTTTTTAGTTTTATAGCTTAAGTGTTTGATACCCATTAGAGATTAAAGTCTTAAAATCATGCTAAATCGATTCTCATTAGTTATCTAAGCCTCAGAAGCATTGCCCAATCGCTAGGAGTCCTTAAATTGCTAATTAAGTGTTATTTACTTGCTGTCTAACGACTAAAAAGCCTTGAATATAGCCATTCGGTGAATACCCATTGCCCGTTGTGCCTTAGACATGGTTGCCCATGGTCTAAAGGTTTTGGGTTTTTATTTTGGGGAATTTTGAGTGGCTGTCCAGCAAGGAAATAGACTTTCCTCAGTTGATTTAGGCCTTTCTAGCATGTTTTCAGTTTTCAGTAGGTTGGTTCTAATTTTTAGAACTTATCCTTGTTGTTTAGGAGTTTATCTGGATCTTTTGAGCGGCTTAAGGAGTTCTTTAGGAGCGTTTGTAAGCTTTTGGTAAGTAGTTTCTACTCGTTGAGTCTGTTTGACTGCATGAGCATATTGTTTGTTACTCGTTTCTCTAGTTTGCGTTGTTGGTCGTTATATAACTTGTTATATGTGATAAGCACGTTGCTCTGCTTGATTTAAACTATGTTGTTCCAACTGGTGTTAAGCATGTTGTGTTATTGTTCTTGGGCTATGTTGCATGTGTGTCATGGATGCATAGTCTGTGTGCTCATGCAGAGGTGAGCTGGGTGTGTGTGAGGAGCGTGACGCGGAAATCATGTGTTAAGATTGCGATACATGACGCGAAAATCATGTTATTGGTGCGGAGCGTGACGCGTAAATCACGTGAGAGTGTGCGCTGTGCATGGCGCGTAATTCATGTGCTGGGTGTGAGTGCGTTACATGACGCGGAAATCATGTTTTGGTGCGGAGCGTGA

mRNA sequence

ATGAGTTTCTGCCCGTTCCAGTTTTGTTTCCGTCGTTGTGATGATGGAAATTCGGGGAAAGAATTTTCAATTATCACTGGATTAAATTGTAATCCATTTCCTGTAGAAAACATTGATGATGGAGATGCGTTAGATTATTGGGCATTGGAAATCATTCCAAAATTGTCCGAGGAAAGCTTAGGATTTGCTAGAAGAATCCAAAGCCCCACCCCCACCCCCAACCCACGGATTGCTCAATGGGAGATGTTCGACACGCTTGATTGGAGTGACTTGGATGAAAATATCTTCTCGACTGAAGATGTAAGTCTCGAAAAACTAGAATTTATAAATGCAGCTGAGCAATTTGTAGATGTTGCTGAAAATGTTGTCAATGCAGAAGACCACATTGACAACATTGACAGGATTGTTGATAATGCAACCTCATATGTTGCTACTAGAGAAAAAGAGATACTGAACCCCGTGCCTAAGTCCCTTCTATCGACCTTCGCGCCGCCCTCGTTCGCGCGGATCTCTCTCTCTCTTTCGCAACTCTCTCTCTCTCGTTGGTCTCTCTCCTTCTCGAGTCGCCTCGCCCGTCCAGCCGCTGCCGCTGCAACAAGGTGTGTCGCCGCCGCCGCTTCACCGCTGTTCGGATCTGCGGTTTTAGGTTCGTTTCTTGTGGCATTTCGCCAAGAAGAGAATAAACTCGTGGCCTTTCGGAGTGTCTTGTTCTCGCGTTTTTGCCTCTGTCCAGCAACATTCTTGGGTGTTTCCGGCAATGATTGGCAGTTCCGGAGTTTATCTGGATCTTTTGAGCGGCTTAAGGAGTTCTTTAGGAGCGTTTGTAAGCTTTTGCACGTTGCTCTGCTTGATTTAAACTATGTTGTTCCAACTGGTGTTAAGCATGTTGTGTTATTGTTCTTGGGCTATGTTGCATGTGTGTCATGGATGCATAGTCTGTGTGCTCATGCAGAGGTGAGCTGGGTGTGTGTGAGGAGCGTGACGCGGAAATCATGTGTTAAGATTGCGATACATGACGCGAAAATCATGTTATTGGTGCGGAGCGTGACGCGTAAATCACGTGAGAGTGTGCGCTGTGCATGGCGCGTAATTCATGTGCTGGGTGTGAGTGCGTTACATGACGCGGAAATCATGTTTTGGTGCGGAGCGTGA

Coding sequence (CDS)

ATGAGTTTCTGCCCGTTCCAGTTTTGTTTCCGTCGTTGTGATGATGGAAATTCGGGGAAAGAATTTTCAATTATCACTGGATTAAATTGTAATCCATTTCCTGTAGAAAACATTGATGATGGAGATGCGTTAGATTATTGGGCATTGGAAATCATTCCAAAATTGTCCGAGGAAAGCTTAGGATTTGCTAGAAGAATCCAAAGCCCCACCCCCACCCCCAACCCACGGATTGCTCAATGGGAGATGTTCGACACGCTTGATTGGAGTGACTTGGATGAAAATATCTTCTCGACTGAAGATGTAAGTCTCGAAAAACTAGAATTTATAAATGCAGCTGAGCAATTTGTAGATGTTGCTGAAAATGTTGTCAATGCAGAAGACCACATTGACAACATTGACAGGATTGTTGATAATGCAACCTCATATGTTGCTACTAGAGAAAAAGAGATACTGAACCCCGTGCCTAAGTCCCTTCTATCGACCTTCGCGCCGCCCTCGTTCGCGCGGATCTCTCTCTCTCTTTCGCAACTCTCTCTCTCTCGTTGGTCTCTCTCCTTCTCGAGTCGCCTCGCCCGTCCAGCCGCTGCCGCTGCAACAAGGTGTGTCGCCGCCGCCGCTTCACCGCTGTTCGGATCTGCGGTTTTAGGTTCGTTTCTTGTGGCATTTCGCCAAGAAGAGAATAAACTCGTGGCCTTTCGGAGTGTCTTGTTCTCGCGTTTTTGCCTCTGTCCAGCAACATTCTTGGGTGTTTCCGGCAATGATTGGCAGTTCCGGAGTTTATCTGGATCTTTTGAGCGGCTTAAGGAGTTCTTTAGGAGCGTTTGTAAGCTTTTGCACGTTGCTCTGCTTGATTTAAACTATGTTGTTCCAACTGGTGTTAAGCATGTTGTGTTATTGTTCTTGGGCTATGTTGCATGTGTGTCATGGATGCATAGTCTGTGTGCTCATGCAGAGGTGAGCTGGGTGTGTGTGAGGAGCGTGACGCGGAAATCATGTGTTAAGATTGCGATACATGACGCGAAAATCATGTTATTGGTGCGGAGCGTGACGCGTAAATCACGTGAGAGTGTGCGCTGTGCATGGCGCGTAATTCATGTGCTGGGTGTGAGTGCGTTACATGACGCGGAAATCATGTTTTGGTGCGGAGCGTGA

Protein sequence

MSFCPFQFCFRRCDDGNSGKEFSIITGLNCNPFPVENIDDGDALDYWALEIIPKLSEESLGFARRIQSPTPTPNPRIAQWEMFDTLDWSDLDENIFSTEDVSLEKLEFINAAEQFVDVAENVVNAEDHIDNIDRIVDNATSYVATREKEILNPVPKSLLSTFAPPSFARISLSLSQLSLSRWSLSFSSRLARPAAAAATRCVAAAASPLFGSAVLGSFLVAFRQEENKLVAFRSVLFSRFCLCPATFLGVSGNDWQFRSLSGSFERLKEFFRSVCKLLHVALLDLNYVVPTGVKHVVLLFLGYVACVSWMHSLCAHAEVSWVCVRSVTRKSCVKIAIHDAKIMLLVRSVTRKSRESVRCAWRVIHVLGVSALHDAEIMFWCGA
Homology
[Close]
BLAST of Spg000842 vs. NCBI nr
Match: XP_038891747.1 (pescadillo homolog [Benincasa hispida])

HSP 1 Score: 58.5 bits (140), Expect = 1.4e-04
Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 0 

Query: 44 LDYWALEIIPKLSEESLGFARRIQSPTPTPNPRIAQWEMFDTLDWSDLDENIF 97
          L YWA EIIP+LS  ++GFARRI+S      PR+ QWE  +  DW  ++ NIF
Sbjct: 45 LVYWAFEIIPRLSNPTIGFARRIKS----DGPRLTQWESQEPNDWQHINNNIF 93

The following BLAST results are available for this feature:
BLAST of Spg000842 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038891747.11.4e-0450.94pescadillo homolog [Benincasa hispida][more]
BLAST of Spg000842 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg000842 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg000842 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg000842.1Spg000842.1mRNA