Spg000416 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000416
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Pre-mRNA-splicing factor SYF2
Location	scaffold8: 39195026 .. 39197700 (-)
RNA-Seq Expression	Spg000416
Synteny	Spg000416

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTCGGTTTTGCTTCGCAAGTTTCAACTGGAATCAGTGACAATTTTCATGCTGTTATTTGTTGCTTTTTCTCGCTCGCTTTCTGAGAATTCGAACAAAGAAAAGGATTGTGGTTTTTCCCCCCTTTTTTGGTGTATTTTTTATGCTGTAGTGGACTTGATTATGTGTTATGTTGCTGTCCGTGGTTTCCTTTCCCCAGAAGTTGAATTGTTCTTGTTTACTCTGGAATTGTTTGTGCTCCTTCGAATCCCTCTTGCCAAAAACAAAGACAGATAGAAAAAAAAAAAAAATCAATTTTCTGTTGGATACACTTTTTGCGCATTGTGTGTTGGGAGAAGTCGAGGATAACTATTGGCGTTGGTTCGATACATTCGGTTAATTTAACAAGATTCAGTTGGAAGTTTGAGTTCTTTTACTCGCTTGATTGATCATGTAACCTTTGTATCCAATGATAGCTTTTATTGTCAAATTTTCTTTTATGGCTTTAAGAATCCAAAATTTTTGTAGATTTTTAAGCTCCGTTTAATTATGACTCTTTATTTGCAGTGTTTTATTGGGTAGAGAAGTTGTTGCTGAAATGACTGATGAAGGAAGAGTACACCCGGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAATAATAGCTGAAGTCAAAGCCCGGAATCAGCACAATGAGCCAGGTTTTATGACATGTTACAATTTCTTTGCAATTACCTTGAACATCATGACCTTCTCTAATTGTTGCTAACAATTTCATTCCCCATCACTATTTACCCTTTTGTCTAATTTGTTAATGTTCTCTTGGAATCACTTATTTCTTCAACATTGCTCAAAATTGGATCTGTAAATTGCTTAATCATCTTTTATTCCCTCCTCCACCTTTCAAATTCAGATGATGTTATTTGTTATCGGCCACTCTTATCTCATATAAACTTTTTCTTGTGAATTGTGATCACAGTTCCCATTTCATCAGAAGCCGTTCAAGCTGGTAGAAGTGGTGGTTCTTCCAATTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGATGAAGAAGGGCACAGTGACGGTGATATTGACAAATTTAGTGGTGGGGAGACTGTGGAAGGAGACTTCACACAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTAAGGCTTAAGATGGTAATTTTCTATATTTTTTTGAAGTAACAATCAATTACAATCAAGCATCTCGTAATGACTTATGGATGAATGGATGCAGAATGAGGCACGAAAAGCTAATCAGACAGCAATTGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAACTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCGGAGTCCAAATATAAGAAATGGGAGAAGGATGCAGCTCCCTATGGATGGGATGGTGAGTCTCTATGTGTACTACGAATGTCATAACACCAATTGAGCAATTCTTGTGCACATGGGCTCTTTTGAATACGTGCAGGTGCAGCTGCACCTATTATGCTGATTGCTGATTTTAGCTGCTTTTTTGTGGACAAATGCATTTTTTTTTTAATAATTTGACAAGGTTCCCTAATATGCTGGTTGATGACGAAAACATGAATTGATTCTAGGATATAGATATTATGTGTTGAGTTGTCAAGGATATTATGCATGCCCATGCCCTAATAGGTGTGTGAACTCTATTGGTGCAATCCTGAATGTGCATTCTATTGAAAGAACTTTTTAATTAAAGTAATGGTCACTTTTTAATTCTTTCTTCTTCACGTAGTATGTTACTCTTTGGGGCTCATTCTTGTAATTAGCTCTTGGGGTCTTGGTTTGTGGGCTTGTTTCTAGCGTTCGGCTTGTTTTTTTGTATGCCATTGTTCTTCCTTTCATTGGTTTCTTATTAAAGAAAATAGCTATAGTGTCCCATGTTTCTCTGTATAAGGAGATTTAAATTGATTGTATAATCATGAATTGTGTTATATTACCATGTAATCACTTTTCTTGGGGGAGGGGAGGGGGAAGGTCTTGGGTATAAAGTTTACTTAATTGGCTGTATTTTATCTATTTGTTGTCAATACTTATCTGAAAAGGTTAAATTGCATTTGTTTTAACAGTCTTTAACCAGAAAACATTGTACAATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGTACTGTTAGTTCCACTGTATAATTTTGACTATATCTGTAAATATTAGATTTCTGAGGATATAGTTCTTGGGCCACTACTCTGCAGTCTCCTAAGGTTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGAGCGGGACGAGAAGCGAAAGTTGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATTGATTCTATCAATGATCGCAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACGCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA

mRNA sequence

ATGAATTTCGGTTTTGCTTCGCAAGTTTCAACTGGAATCAGTGACAATTTTCATGCTGTTATTTTGGACTTGATTATGTGTTATGTTGCTGTCCGTGGTTTCCTTTCCCCAGAAGTTGAATTGTTCTTGTTTACTCTGGAATTTGTTTTATTGGGTAGAGAAGTTGTTGCTGAAATGACTGATGAAGGAAGAGTACACCCGGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAATAATAGCTGAAGTCAAAGCCCGGAATCAGCACAATGAGCCAGTTCCCATTTCATCAGAAGCCGTTCAAGCTGGTAGAAGTGGTGGTTCTTCCAATTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGATGAAGAAGGGCACAGTGACGGTGATATTGACAAATTTAGTGGTGGGGAGACTGTGGAAGGAGACTTCACACAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTAAGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATTGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAACTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCGGAGTCCAAATATAAGAAATGGGAGAAGGATGCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACATTGTACAATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGTCTCCTAAGGTTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGAGCGGGACGAGAAGCGAAAGTTGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATTGATTCTATCAATGATCGCAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACGCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA

Coding sequence (CDS)

ATGAATTTCGGTTTTGCTTCGCAAGTTTCAACTGGAATCAGTGACAATTTTCATGCTGTTATTTTGGACTTGATTATGTGTTATGTTGCTGTCCGTGGTTTCCTTTCCCCAGAAGTTGAATTGTTCTTGTTTACTCTGGAATTTGTTTTATTGGGTAGAGAAGTTGTTGCTGAAATGACTGATGAAGGAAGAGTACACCCGGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAATAATAGCTGAAGTCAAAGCCCGGAATCAGCACAATGAGCCAGTTCCCATTTCATCAGAAGCCGTTCAAGCTGGTAGAAGTGGTGGTTCTTCCAATTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGATGAAGAAGGGCACAGTGACGGTGATATTGACAAATTTAGTGGTGGGGAGACTGTGGAAGGAGACTTCACACAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTAAGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATTGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAACTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCGGAGTCCAAATATAAGAAATGGGAGAAGGATGCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACATTGTACAATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGTCTCCTAAGGTTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGAGCGGGACGAGAAGCGAAAGTTGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATTGATTCTATCAATGATCGCAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACGCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA

Protein sequence

MNFGFASQVSTGISDNFHAVILDLIMCYVAVRGFLSPEVELFLFTLEFVLLGREVVAEMTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNFVPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

Homology

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BLAST of Spg000416 vs. NCBI nr
Match: KAG7010847.1 (Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 598.6 bits (1542), Expect = 3.7e-167
Identity = 302/334 (90.42%), Postives = 318/334 (95.21%), Query Frame = 0


Query: 40  ELFLFTLEFVLLGREVVAEMTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEP 99
           E+    L+ V+  REVVA+M+DEGRVHPDCRNASNPYHEC+EYCFK+IAEVKARNQ NEP
Sbjct: 414 EISSLQLKCVVGVREVVAKMSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEP 473

Query: 100 VPISSEAVQAGRSGGSSNFVPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLT 159
           VP SSE VQAGRS GSSNFVPPDEYEDL DEKP+EEGHSDGD DKFSGGE VEGDFT+LT
Sbjct: 474 VPTSSEGVQAGRSSGSSNFVPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLT 533

Query: 160 GRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDAN 219
           GRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDAN
Sbjct: 534 GRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDAN 593

Query: 220 GLDMTKAYMLDTQEAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNK 279
           GLDM+KAYMLDTQEAAESKYKKWEKD APYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNK
Sbjct: 594 GLDMSKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNK 653

Query: 280 MKESDPEFYREASSLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSI 339
           MKESDPEFYREASSLQYGK+PK+SEDKIDNMVKELK+R+EKRK FSRRRKFHEDKDIDSI
Sbjct: 654 MKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSI 713

Query: 340 NDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD 374
           NDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
Sbjct: 714 NDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD 747

[Close]

BLAST of Spg000416 vs. NCBI nr
Match: KAG7027023.1 (Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 595.1 bits (1533), Expect = 4.1e-166
Identity = 299/321 (93.15%), Postives = 309/321 (96.26%), Query Frame = 0


Query: 53  REVVAEMTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRS 112
           R+VVAEM+DEGRVHPDCRNASNPYHECSEYCF+IIAEVKARNQ NEPV  SSEAVQAGRS
Sbjct: 9   RDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRS 68

Query: 113 GGSSNFVPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKM 172
              SNF PPDEYEDLHDEKP+EEGHSDGD DK SGGE VEGDFT+LTGRKKKLFELRLKM
Sbjct: 69  SAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKM 128

Query: 173 NEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQ 232
           NEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQ
Sbjct: 129 NEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQ 188

Query: 233 EAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREAS 292
           EAAESKYKKWEKD APYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMKESDPEFYREAS
Sbjct: 189 EAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREAS 248

Query: 293 SLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIER 352
           SLQYGK+PK+SEDKIDNMVKELK+R+EKRK FSRRRKFHEDKDIDSINDRNEHFNKKIER
Sbjct: 249 SLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER 308

Query: 353 AFGRYTLEIKNNLERGTALPD 374
           AFGRYTLEIKNNLERGTALPD
Sbjct: 309 AFGRYTLEIKNNLERGTALPD 329

[Close]

BLAST of Spg000416 vs. NCBI nr
Match: XP_011649295.1 (pre-mRNA-splicing factor syf2 [Cucumis sativus] >KGN61940.1 hypothetical protein Csa_006692 [Cucumis sativus])

HSP 1 Score: 591.7 bits (1524), Expect = 4.6e-165
Identity = 294/315 (93.33%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 59  MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 118
           M+DEGRVHPDCRNASNPYHECSEYCFK+IAE+KAR+Q NEPVP SSE VQAGRS GSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 119 VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 178
           VPPDEYEDLHDEKPDEEGHSDGD+DKFSG E VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 179 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 238
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 239 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 298
           YKKWEKD APYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 299 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 358
           +PK+SEDKIDNMVKELK+RDEKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 359 LEIKNNLERGTALPD 374
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Spg000416 vs. NCBI nr
Match: XP_023532640.1 (pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 590.5 bits (1521), Expect = 1.0e-164
Identity = 297/321 (92.52%), Postives = 308/321 (95.95%), Query Frame = 0


Query: 53  REVVAEMTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRS 112
           R+VVAEM+DEGRVHPDCRNASNPYHECSEYCF+IIAEVKARNQ NEPV  SSEAVQAGRS
Sbjct: 9   RDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRS 68

Query: 113 GGSSNFVPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKM 172
              SNF PPDEYEDLHDEKP+EEGHSDGD DK SG E VEGDFT+LTGRKKKLFELRLKM
Sbjct: 69  SAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGEENVEGDFTKLTGRKKKLFELRLKM 128

Query: 173 NEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQ 232
           NEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQ
Sbjct: 129 NEARKANQTAIAAEKKKMEPPSESRGISKQKWLEERKKKIGKLLDANGLDMTKAYMLDTQ 188

Query: 233 EAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREAS 292
           EAAESKYKKWEKD APYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMKESDPEFYREAS
Sbjct: 189 EAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREAS 248

Query: 293 SLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIER 352
           SLQYGK+PK+SEDKIDNMVKELK+R+EKRK FSRRRKFHEDKDIDSINDRNEHFNKKIER
Sbjct: 249 SLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER 308

Query: 353 AFGRYTLEIKNNLERGTALPD 374
           AFGRYTLEIKNNLERGTALPD
Sbjct: 309 AFGRYTLEIKNNLERGTALPD 329

[Close]

BLAST of Spg000416 vs. NCBI nr
Match: XP_022943827.1 (pre-mRNA-splicing factor syf2-like [Cucurbita moschata] >XP_022943828.1 pre-mRNA-splicing factor syf2-like [Cucurbita moschata])

HSP 1 Score: 589.3 bits (1518), Expect = 2.3e-164
Identity = 294/315 (93.33%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 59  MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 118
           M+DEGRVHPDCRNASNPYHEC+EYCFK+IAEVKARNQ NEPVP SSE VQAGRS GSSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 119 VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 178
           VPPDEYEDL DEKP+EEGHSDGD DKFSGGE VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 179 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 238
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 239 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 298
           YKKWEKD APYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 299 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 358
           +PK+SEDKIDNMVKELK+R+EKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 359 LEIKNNLERGTALPD 374
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Spg000416 vs. ExPASy Swiss-Prot
Match: Q8AVQ6 (Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.1e-26
Identity = 85/214 (39.72%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 161 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 220
           R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   A
Sbjct: 30  RLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKNEEKK--RECAA 89

Query: 221 NGLDMTKAYMLD-TQEAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEY 280
           NG+D  +A +L+ + E AE   +K ++     G+  +    L   Y++ TK +  D+EEY
Sbjct: 90  NGVDFERAKLLEISAEDAERWERKKKRKNPDLGFSDYAAAQL-RQYQRLTKQIKPDMEEY 149

Query: 281 NKMKESDPEFYREASSLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDID 340
              KE   E +   S   Y  +   S+  ID MV +L+++ EKR+ +SRRR +++D DID
Sbjct: 150 EMEKEKQGELFYPTSDSLYHGTHVPSQSGIDRMVTDLEKQIEKREKYSRRRAYNDDADID 209

Query: 341 SINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 372
            IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 210 YINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 240

[Close]

BLAST of Spg000416 vs. ExPASy Swiss-Prot
Match: Q28G05 (Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.5e-25
Identity = 84/214 (39.25%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 161 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 220
           R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   A
Sbjct: 39  RLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKEEEKK--RECAA 98

Query: 221 NGLDMTKAYMLD-TQEAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEY 280
           NG+D  +A +L+ + E AE   +K ++     G+  +    L   Y++ TK +  D+EEY
Sbjct: 99  NGVDYERAKLLEISAEDAERWERKKKRKNPDLGFSDYAAAQL-RQYQRLTKQIKPDMEEY 158

Query: 281 NKMKESDPEFYREASSLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDID 340
              K+   E +   S   Y  +   S+  ID MV +L+++ EKR+ +SRRR +++D DID
Sbjct: 159 EMEKQKQGEMFYPTSESLYHGTHIPSQSGIDRMVTDLEKQIEKREKYSRRRAYNDDADID 218

Query: 341 SINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 372
            IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 219 YINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]

BLAST of Spg000416 vs. ExPASy Swiss-Prot
Match: Q6DV01 (Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 6.2e-24
Identity = 82/215 (38.14%), Postives = 129/215 (60.00%), Query Frame = 0


Query: 163 KKLFELRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDA 222
           +K  EL LK NEARK N   +  E K+++ P+      S+ +W   +E++KK+      A
Sbjct: 41  RKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKSRLEWELKVEEKKKE----CVA 100

Query: 223 NGLDMTKAYMLD-TQEAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEY 282
            G D  +  +L+ + E AE   +K +K     G+  +    +   Y++ T+ +  DLE+Y
Sbjct: 101 KGEDYERVKLLEISAEDAERFERKRKKRNPDLGFSDYAAAQM-RQYQRLTRQIKPDLEKY 160

Query: 283 NKMK-ESDPEFYREASSLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDI 342
            K++ ES  EFY  ++SL +G      E  +D MV++L+++ +KR+ +SRRR +++D DI
Sbjct: 161 AKLREESGEEFYPTSNSLLHGTHVPCKEG-VDKMVEDLEKQIQKREKYSRRRPYNDDADI 220

Query: 343 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 372
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 221 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]

BLAST of Spg000416 vs. ExPASy Swiss-Prot
Match: Q9D198 (Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 8.1e-24
Identity = 84/215 (39.07%), Postives = 126/215 (58.60%), Query Frame = 0


Query: 161 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 220
           R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 221 NGLDMTKAYMLD-TQEAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEY 280
            G D  K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQL-RQYHRLTKQIKPDMESY 151

Query: 281 NKMKESDPE-FYREASSLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDI 340
            + +E   E F+  ++SL +G     SE+ ID MV +L+++ EKR  +SRRR +++D DI
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKRDKYSRRRPYNDDADI 211

Query: 341 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 372
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 212 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242

[Close]

BLAST of Spg000416 vs. ExPASy Swiss-Prot
Match: Q4QRB2 (Pre-mRNA-splicing factor SYF2 OS=Rattus norvegicus OX=10116 GN=Syf2 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 8.1e-24
Identity = 84/215 (39.07%), Postives = 126/215 (58.60%), Query Frame = 0


Query: 161 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 220
           R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 221 NGLDMTKAYMLD-TQEAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEY 280
            G D  K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQL-RQYHRLTKQIKPDMESY 151

Query: 281 NKMKESDPE-FYREASSLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDI 340
            + +E   E F+  ++SL +G     SE+ ID MV +L+++ EKR  +SRRR +++D DI
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKRDKYSRRRPYNDDADI 211

Query: 341 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 372
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 212 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242

[Close]

BLAST of Spg000416 vs. ExPASy TrEMBL
Match: A0A0A0LJ81 (Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 2.2e-165
Identity = 294/315 (93.33%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 59  MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 118
           M+DEGRVHPDCRNASNPYHECSEYCFK+IAE+KAR+Q NEPVP SSE VQAGRS GSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 119 VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 178
           VPPDEYEDLHDEKPDEEGHSDGD+DKFSG E VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 179 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 238
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 239 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 298
           YKKWEKD APYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 299 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 358
           +PK+SEDKIDNMVKELK+RDEKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 359 LEIKNNLERGTALPD 374
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Spg000416 vs. ExPASy TrEMBL
Match: A0A6J1FXE9 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 1.1e-164
Identity = 294/315 (93.33%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 59  MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 118
           M+DEGRVHPDCRNASNPYHEC+EYCFK+IAEVKARNQ NEPVP SSE VQAGRS GSSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 119 VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 178
           VPPDEYEDL DEKP+EEGHSDGD DKFSGGE VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 179 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 238
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 239 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 298
           YKKWEKD APYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 299 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 358
           +PK+SEDKIDNMVKELK+R+EKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 359 LEIKNNLERGTALPD 374
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Spg000416 vs. ExPASy TrEMBL
Match: A0A6J1JD37 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.4e-164
Identity = 293/315 (93.02%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 59  MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 118
           M+DEGRVHPDCRNASNPYHEC+EYCFK+IAEVKARNQ NEPVP SSE VQAGRS GSSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 119 VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 178
           VPPDEYEDL DEKP+EEGHSDGD DKFSGGE VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 179 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 238
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 239 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 298
           YKKWEKD APYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGK 240

Query: 299 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 358
           +PK+SEDKIDNMVKELK+R+EKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 359 LEIKNNLERGTALPD 374
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Spg000416 vs. ExPASy TrEMBL
Match: A0A5A7TRR3 (Pre-mRNA-splicing factor SYF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001060 PE=3 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.4e-164
Identity = 291/315 (92.38%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 59  MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 118
           M+DEGRVHPDCRNASNPYHECSEYCFK+IA++KAR+Q NEPVP SSE VQAGRS GSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 119 VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 178
           VPPDEYEDLHDEKPDEEGHSDGD+DKFSG E VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 179 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 238
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 239 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 298
           YKKWEKD APYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 299 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 358
           +PK+SEDKI+NMVKELK+RDEKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 359 LEIKNNLERGTALPD 374
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Spg000416 vs. ExPASy TrEMBL
Match: A0A1S3C6T5 (Pre-mRNA-splicing factor SYF2 OS=Cucumis melo OX=3656 GN=LOC103497339 PE=3 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.4e-164
Identity = 291/315 (92.38%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 59  MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 118
           M+DEGRVHPDCRNASNPYHECSEYCFK+IA++KAR+Q NEPVP SSE VQAGRS GSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 119 VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 178
           VPPDEYEDLHDEKPDEEGHSDGD+DKFSG E VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 179 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 238
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 239 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 298
           YKKWEKD APYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 299 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 358
           +PK+SEDKI+NMVKELK+RDEKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 359 LEIKNNLERGTALPD 374
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Spg000416 vs. TAIR 10
Match: AT2G16860.1 (GCIP-interacting family protein )

HSP 1 Score: 410.2 bits (1053), Expect = 1.7e-114
Identity = 219/316 (69.30%), Postives = 247/316 (78.16%), Query Frame = 0


Query: 59  MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKAR-NQHNEPVPISSEAVQAGRSGGSSN 118
           M  E RVHPDC NASNPYHEC EYCFK IAE KAR  + N  +    E  +         
Sbjct: 1   MVSERRVHPDCINASNPYHECVEYCFKKIAEAKARFEKQNTGLAKVHEQTRE-------- 60

Query: 119 FVPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARK 178
             P D+     D   +EE   D         +  + D TQLTGR+KKLFELRLKMNEARK
Sbjct: 61  --PLDDKRIEEDSSEEEEEEED--------NQEPQVDVTQLTGRQKKLFELRLKMNEARK 120

Query: 179 ANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAES 238
           +NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDMT+AYMLDTQEAAES
Sbjct: 121 SNQTDVGSEKKKMEAPTETKGISKQKWLEGRKKKIGKLLDANGLDMTQAYMLDTQEAAES 180

Query: 239 KYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYG 298
           KYKKWEK+  P GWDVFNQKTLYNAYKKRTKN+ VDLEEYN+M+ +DPEFYREASSLQYG
Sbjct: 181 KYKKWEKEPTPAGWDVFNQKTLYNAYKKRTKNIQVDLEEYNRMRAADPEFYREASSLQYG 240

Query: 299 KSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY 358
           K+PK S+DKID M KEL +R++KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+Y
Sbjct: 241 KAPKTSQDKIDKMAKELLDREQKRQEFSRRRKFREEKDIDSINDRNEHFNKKIERAFGKY 298

Query: 359 TLEIKNNLERGTALPD 374
           TLEIKNNLERGTALPD
Sbjct: 301 TLEIKNNLERGTALPD 298

[Close]

BLAST of Spg000416 vs. TAIR 10
Match: AT4G38560.1 (Arabidopsis phospholipase-like protein (PEARLI 4) family )

HSP 1 Score: 42.4 bits (98), Expect = 9.6e-04
Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 0


Query: 63 GRVHPDCRNASNPYHECSEYCFKIIA 89
          G VH DC N+ NPYHEC + CFK I+
Sbjct: 3  GIVHHDCPNSGNPYHECHDQCFKRIS 28

[Close]

BLAST of Spg000416 vs. TAIR 10
Match: AT4G38560.2 (Arabidopsis phospholipase-like protein (PEARLI 4) family )

HSP 1 Score: 42.4 bits (98), Expect = 9.6e-04
Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 0


Query: 63 GRVHPDCRNASNPYHECSEYCFKIIA 89
          G VH DC N+ NPYHEC + CFK I+
Sbjct: 3  GIVHHDCPNSGNPYHECHDQCFKRIS 28

The following BLAST results are available for this feature:

BLAST of Spg000416 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010847.1	3.7e-167	90.42	Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG7027023.1	4.1e-166	93.15	Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_011649295.1	4.6e-165	93.33	pre-mRNA-splicing factor syf2 [Cucumis sativus] >KGN61940.1 hypothetical protein...	[more]
XP_023532640.1	1.0e-164	92.52	pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943827.1	2.3e-164	93.33	pre-mRNA-splicing factor syf2-like [Cucurbita moschata] >XP_022943828.1 pre-mRNA...	[more]

BLAST of Spg000416 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8AVQ6	5.1e-26	39.72	Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1	[more]
Q28G05	1.5e-25	39.25	Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1	[more]
Q6DV01	6.2e-24	38.14	Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1	[more]
Q9D198	8.1e-24	39.07	Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1	[more]
Q4QRB2	8.1e-24	39.07	Pre-mRNA-splicing factor SYF2 OS=Rattus norvegicus OX=10116 GN=Syf2 PE=2 SV=1	[more]

BLAST of Spg000416 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ81	2.2e-165	93.33	Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV...	[more]
A0A6J1FXE9	1.1e-164	93.33	Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3...	[more]
A0A6J1JD37	2.4e-164	93.02	Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 S...	[more]
A0A5A7TRR3	2.4e-164	92.38	Pre-mRNA-splicing factor SYF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3C6T5	2.4e-164	92.38	Pre-mRNA-splicing factor SYF2 OS=Cucumis melo OX=3656 GN=LOC103497339 PE=3 SV=1	[more]

BLAST of Spg000416 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16860.1	1.7e-114	69.30	GCIP-interacting family protein	[more]
AT4G38560.1	9.6e-04	61.54	Arabidopsis phospholipase-like protein (PEARLI 4) family	[more]
AT4G38560.2	9.6e-04	61.54	Arabidopsis phospholipase-like protein (PEARLI 4) family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013260	mRNA splicing factor SYF2	PFAM	PF08231	SYF2	coord: 219..366 e-value: 1.3E-34 score: 119.9
IPR013260	mRNA splicing factor SYF2	PANTHER	PTHR13264	GCIP-INTERACTING PROTEIN P29	coord: 59..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..148
None	No IPR available	PANTHER	PTHR13264:SF5	PRE-MRNA-SPLICING FACTOR SYF2	coord: 59..373

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000416.1	Spg000416.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0071014	post-mRNA release spliceosomal complex
cellular_component	GO:0000974	Prp19 complex