Spg000376 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000376
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	auxin-responsive protein SAUR23-like
Location	scaffold8: 38349840 .. 38351053 (+)
RNA-Seq Expression	Spg000376
Synteny	Spg000376

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAATTACCATCGAACCCAAAAGTTTAAGTTGATGGGCTATGGTAAATTTAATCTTTTATCAATACTTTAACAACTTGAAAACGATCAACTTGACAAGTCTCTGAGATTATAAACATCCTTGAGACATATATATCTATTTCTCATGTTAATTGCAAAGTGCTTGTGTTAAATCACCTTGAACACACGAGCTTAAGCCGATGAGTTATGATAAATCTAATCTTTTATCAACGTTCTGATACTCTCCTCACTTGAGCAAGGTTCAACAAATGGTTATCAATATTAATAAGAGAGAATGATATTATAGGAGTTTGAATGTAGAACCCCCAATTCTAGTACCAATGTTAAATTACCGCCGAACCCAAAAGTTTAAGTTGATGAGTTGTGGTAAATTTAATCTTTTATCAATACTTTAACAACTTGAAAACGATCAACTTGACAAGTCTCTGAGATTATAAACATCCTTGAGACATATACATCCATTTCAGCTGATGGATACAATATCCATCCTGATATACACCACATATTTTTGAAGTAGTCCAATATTTCAACTTGAATATAGTTCTACTATCCTCTTCTCAATACCTATATTAGCCAGGTGGAAATGTTTGAATATGACTTCATTTATTGGAACAAGTGGGTCCACACTCCACAGTACCACAATTTGGATCACATTTGAAAGTGAGTGTACTTCAACCACTTGAGCAGCCCATGTGAATATTTGGTGAAGCAGGTTGTCTTGGACACCTATCTTCTATTCTCTGTTCTTATCTTCTCCTTTCTCCTGTATATACATACCAAATAAACAGCTTATCTCCAACTCAAATCTTCTCACATATTCTCATACAAGCAGTACAATTTAGCATTTTCAGATCCATATCAAGAGCTTAACCATTAAAAGTTCTTCATTGTTCTCTCACTTAATCAAATTTAGACATGGGGATTCGTCTACCTTCTGTTCTCTCCGGTGCCAAGCAAATTCTCAGAACGCAGTCCATGTCTGTTCCCAAAGGTCATATTGCAGTGTACGTGGGAGAAATTCAGAGGAAGCGGTTTTTGGTTCCAATTTCTTACTTGAACCATCCTTCATTTGTAGACTTGCTCAGTAGGGCTGAAGAAGAGTTTGGATTCAACCATCCAACAGGAGGTTTGACCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGATTGCAGACTTCATGA

mRNA sequence

ATGTTAAATTACCATCGAACCCAAAAGTTTAAGTTGATGGGCTATGACATGGGGATTCGTCTACCTTCTGTTCTCTCCGGTGCCAAGCAAATTCTCAGAACGCAGTCCATGTCTGTTCCCAAAGGTCATATTGCAGTGTACGTGGGAGAAATTCAGAGGAAGCGGTTTTTGGTTCCAATTTCTTACTTGAACCATCCTTCATTTGTAGACTTGCTCAGTAGGGCTGAAGAAGAGTTTGGATTCAACCATCCAACAGGAGGTTTGACCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGATTGCAGACTTCATGA

Coding sequence (CDS)

ATGTTAAATTACCATCGAACCCAAAAGTTTAAGTTGATGGGCTATGACATGGGGATTCGTCTACCTTCTGTTCTCTCCGGTGCCAAGCAAATTCTCAGAACGCAGTCCATGTCTGTTCCCAAAGGTCATATTGCAGTGTACGTGGGAGAAATTCAGAGGAAGCGGTTTTTGGTTCCAATTTCTTACTTGAACCATCCTTCATTTGTAGACTTGCTCAGTAGGGCTGAAGAAGAGTTTGGATTCAACCATCCAACAGGAGGTTTGACCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGATTGCAGACTTCATGA

Protein sequence

MLNYHRTQKFKLMGYDMGIRLPSVLSGAKQILRTQSMSVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVDLLSRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLQTS

Homology

[Close]

BLAST of Spg000376 vs. NCBI nr
Match: XP_023512601.1 (uncharacterized protein LOC111777295 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.9 bits (424), Expect = 4.7e-38
Identity = 84/98 (85.71%), Postives = 88/98 (89.80%), Query Frame = 0


Query: 16  DMGIRLPSVLSGAKQILRTQSMS------VPKGHIAVYVGEIQRKRFLVPISYLNHPSFV 75
           DMGIRLPS+L  AKQIL+TQS+S      VPKGHIAVYVGEIQRKRFLVPISYLNHPSFV
Sbjct: 138 DMGIRLPSLLLSAKQILKTQSVSVRGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFV 197

Query: 76  DLLSRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLQTS 108
           +LLSRAEEEFGFNHPTGGLTIPC EEAFIDVTSRL TS
Sbjct: 198 NLLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLYTS 235

[Close]

BLAST of Spg000376 vs. NCBI nr
Match: XP_022944373.1 (auxin-responsive protein SAUR22-like [Cucurbita moschata])

HSP 1 Score: 165.2 bits (417), Expect = 3.0e-37
Identity = 83/97 (85.57%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 17  MGIRLPSVLSGAKQILRTQSMS------VPKGHIAVYVGEIQRKRFLVPISYLNHPSFVD 76
           MGIRLPS+L  AKQIL+TQS+S      VPKGHIAVYVGEIQRKRFLVPISYLNHPSFV+
Sbjct: 1   MGIRLPSLLFSAKQILKTQSVSVRGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVN 60

Query: 77  LLSRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLQTS 108
           LLSRAEEEFGFNHPTGGLTIPC EEAFIDVTSRL TS
Sbjct: 61  LLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLYTS 97

[Close]

BLAST of Spg000376 vs. NCBI nr
Match: XP_022986737.1 (auxin-responsive protein SAUR22-like [Cucurbita maxima])

HSP 1 Score: 165.2 bits (417), Expect = 3.0e-37
Identity = 83/97 (85.57%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 17  MGIRLPSVLSGAKQILRTQSMS------VPKGHIAVYVGEIQRKRFLVPISYLNHPSFVD 76
           MGIRLPS+L  AKQIL+TQS+S      VPKGHIAVYVGEIQRKRFLVPISYLNHPSFV+
Sbjct: 1   MGIRLPSLLFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVN 60

Query: 77  LLSRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLQTS 108
           LLSRAEEEFGFNHPTGGLTIPC EEAFIDVTSRL TS
Sbjct: 61  LLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLYTS 97

[Close]

BLAST of Spg000376 vs. NCBI nr
Match: KAE8651887.1 (hypothetical protein Csa_006423 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36
Identity = 80/98 (81.63%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 16  DMGIRLPSVLSGAKQILRTQSM------SVPKGHIAVYVGEIQRKRFLVPISYLNHPSFV 75
           +MG RLPS+L  AKQIL+ QS+      SVPKGHIAVYVGEIQ+KRFLVPISYLNHPSF+
Sbjct: 35  NMGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFL 94

Query: 76  DLLSRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLQTS 108
           DLL RAEEEFGFNHPTGGLTIPCKEEAFIDVTSRL TS
Sbjct: 95  DLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 132

[Close]

BLAST of Spg000376 vs. NCBI nr
Match: XP_004147010.1 (auxin-responsive protein SAUR23 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 2.0e-36
Identity = 80/97 (82.47%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 17  MGIRLPSVLSGAKQILRTQSM------SVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVD 76
           MG RLPS+L  AKQIL+ QS+      SVPKGHIAVYVGEIQ+KRFLVPISYLNHPSF+D
Sbjct: 1   MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 77  LLSRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLQTS 108
           LL RAEEEFGFNHPTGGLTIPCKEEAFIDVTSRL TS
Sbjct: 61  LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of Spg000376 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-25
Identity = 55/82 (67.07%), Postives = 69/82 (84.15%), Query Frame = 0


Query: 25  LSGAKQIL-RTQSMSVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVDLLSRAEEEFGFNH 84
           L GAK+IL R+ + + PKG +AVYVGE Q+KR+LVP+SYL+ PSF  LLS++EEEFGF+H
Sbjct: 7   LLGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDH 66

Query: 85  PTGGLTIPCKEEAFIDVTSRLQ 106
           P GGLTIPC E+ FI+VTSRLQ
Sbjct: 67  PMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of Spg000376 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.6e-25
Identity = 56/84 (66.67%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 25  LSGAKQIL---RTQSMSVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVDLLSRAEEEFGF 84
           L GAK+IL    T + + PKG +AVYVGE Q+KR+LVPISYLN PSF  LLS++EEEFGF
Sbjct: 7   LLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGF 66

Query: 85  NHPTGGLTIPCKEEAFIDVTSRLQ 106
           +HP GGLTIPC E+ FI+VTSR Q
Sbjct: 67  DHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Spg000376 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.1e-25
Identity = 55/84 (65.48%), Postives = 68/84 (80.95%), Query Frame = 0


Query: 25  LSGAKQILRTQSMSV---PKGHIAVYVGEIQRKRFLVPISYLNHPSFVDLLSRAEEEFGF 84
           L GAK+IL   + +V   PKG +AVYVGE Q+KR+LVP+SYLN PSF  LLS++E+EFGF
Sbjct: 7   LLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGF 66

Query: 85  NHPTGGLTIPCKEEAFIDVTSRLQ 106
           +HP GGLTIPC E+ FI+VTSRLQ
Sbjct: 67  DHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Spg000376 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.1e-25
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 25  LSGAKQILRTQS---MSVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVDLLSRAEEEFGF 84
           L GAK+IL   +    + PKG +AVYVGE Q+KR+LVP+SYLN PSF  LLS++EEEFGF
Sbjct: 7   LLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 66

Query: 85  NHPTGGLTIPCKEEAFIDVTSRLQ 106
           +HP GGLTIPC E+ FI+VTSRLQ
Sbjct: 67  DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Spg000376 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.8e-24
Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 25  LSGAKQILRTQS---MSVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVDLLSRAEEEFGF 84
           L GAK+IL   +    + PKG +AVYVGE Q+KR+LVP+SYL+ PSF  LLS++EEEFGF
Sbjct: 7   LLGAKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 66

Query: 85  NHPTGGLTIPCKEEAFIDVTSRLQ 106
            HP GGLTIPC E+ FI+VTSRLQ
Sbjct: 67  AHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Spg000376 vs. ExPASy TrEMBL
Match: A0A6J1J8E2 (auxin-responsive protein SAUR22-like OS=Cucurbita maxima OX=3661 GN=LOC111484403 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.5e-37
Identity = 83/97 (85.57%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 17  MGIRLPSVLSGAKQILRTQSMS------VPKGHIAVYVGEIQRKRFLVPISYLNHPSFVD 76
           MGIRLPS+L  AKQIL+TQS+S      VPKGHIAVYVGEIQRKRFLVPISYLNHPSFV+
Sbjct: 1   MGIRLPSLLFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVN 60

Query: 77  LLSRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLQTS 108
           LLSRAEEEFGFNHPTGGLTIPC EEAFIDVTSRL TS
Sbjct: 61  LLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLYTS 97

[Close]

BLAST of Spg000376 vs. ExPASy TrEMBL
Match: A0A6J1FXZ9 (auxin-responsive protein SAUR22-like OS=Cucurbita moschata OX=3662 GN=LOC111448838 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.5e-37
Identity = 83/97 (85.57%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 17  MGIRLPSVLSGAKQILRTQSMS------VPKGHIAVYVGEIQRKRFLVPISYLNHPSFVD 76
           MGIRLPS+L  AKQIL+TQS+S      VPKGHIAVYVGEIQRKRFLVPISYLNHPSFV+
Sbjct: 1   MGIRLPSLLFSAKQILKTQSVSVRGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVN 60

Query: 77  LLSRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLQTS 108
           LLSRAEEEFGFNHPTGGLTIPC EEAFIDVTSRL TS
Sbjct: 61  LLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLYTS 97

[Close]

BLAST of Spg000376 vs. ExPASy TrEMBL
Match: A0A0A0LIZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258710 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 9.5e-37
Identity = 80/97 (82.47%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 17  MGIRLPSVLSGAKQILRTQSM------SVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVD 76
           MG RLPS+L  AKQIL+ QS+      SVPKGHIAVYVGEIQ+KRFLVPISYLNHPSF+D
Sbjct: 1   MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 77  LLSRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLQTS 108
           LL RAEEEFGFNHPTGGLTIPCKEEAFIDVTSRL TS
Sbjct: 61  LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of Spg000376 vs. ExPASy TrEMBL
Match: A0A5A7TQ48 (Auxin-responsive protein SAUR23-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001840 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.1e-36
Identity = 78/97 (80.41%), Postives = 84/97 (86.60%), Query Frame = 0


Query: 17  MGIRLPSVLSGAKQILRTQSM------SVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVD 76
           MG RLPS+L  AKQIL+ QS+      SVPKGHIAVYVGE+Q+ RFLVPISYLNHPSF+D
Sbjct: 1   MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEVQKTRFLVPISYLNHPSFLD 60

Query: 77  LLSRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLQTS 108
           LL RAEEEFGFNHPTGGLTIPCKEEAFIDVTSRL TS
Sbjct: 61  LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of Spg000376 vs. ExPASy TrEMBL
Match: A0A1S3C783 (auxin-responsive protein SAUR23-like OS=Cucumis melo OX=3656 GN=LOC103497280 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.1e-36
Identity = 78/97 (80.41%), Postives = 84/97 (86.60%), Query Frame = 0


Query: 17  MGIRLPSVLSGAKQILRTQSM------SVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVD 76
           MG RLPS+L  AKQIL+ QS+      SVPKGHIAVYVGE+Q+ RFLVPISYLNHPSF+D
Sbjct: 1   MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEVQKTRFLVPISYLNHPSFLD 60

Query: 77  LLSRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLQTS 108
           LL RAEEEFGFNHPTGGLTIPCKEEAFIDVTSRL TS
Sbjct: 61  LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of Spg000376 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 121.7 bits (304), Expect = 3.6e-28
Identity = 59/97 (60.82%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 17  MGIRLPSVLSGAKQILR----------TQSMSVPKGHIAVYVGEIQRKRFLVPISYLNHP 76
           M IR+P VL  +KQILR          + S+ VPKG++AVYVGE   KRF+VP+SYL+ P
Sbjct: 1   MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 77  SFVDLLSRAEEEFGFNHPTGGLTIPCKEEAFIDVTSR 104
           SF DLL +AEEEFGF+HP GGLTIPC EE FID+ SR
Sbjct: 61  SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of Spg000376 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.8 bits (299), Expect = 1.4e-27
Identity = 56/97 (57.73%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 17  MGIRLPSVLSGAKQILRTQS-----MSVPKGHIAVYVGE-IQRKRFLVPISYLNHPSFVD 76
           M IR+  VL  +KQ+L++ S     +++PKGH+AVYVGE +Q++RF+VP++YL+HP F  
Sbjct: 1   MAIRISRVLQSSKQLLKSLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQK 60

Query: 77  LLSRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLQTS 108
           LL +AEEEFGF+HP GGLTIPC E+ FID+ SRL TS
Sbjct: 61  LLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Spg000376 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.9 bits (294), Expect = 5.1e-27
Identity = 59/105 (56.19%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 17  MGIRLPSVLSGAKQILRTQSMS------------VPKGHIAVYVG---EIQRKRFLVPIS 76
           MG+   ++ +  KQIL+  S++            VPKGH+AVYVG   E+++KRF+VPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 77  YLNHPSFVDLLSRAEEEFGFNHPTGGLTIPCKEEAFID-VTSRLQ 106
           +LNHPSF + LSRAEEEFGFNHP GGLTIPC+EE F+D + SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of Spg000376 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-26
Identity = 55/82 (67.07%), Postives = 69/82 (84.15%), Query Frame = 0


Query: 25  LSGAKQIL-RTQSMSVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVDLLSRAEEEFGFNH 84
           L GAK+IL R+ + + PKG +AVYVGE Q+KR+LVP+SYL+ PSF  LLS++EEEFGF+H
Sbjct: 7   LLGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDH 66

Query: 85  PTGGLTIPCKEEAFIDVTSRLQ 106
           P GGLTIPC E+ FI+VTSRLQ
Sbjct: 67  PMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of Spg000376 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.5 bits (288), Expect = 2.6e-26
Identity = 56/84 (66.67%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 25  LSGAKQIL---RTQSMSVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVDLLSRAEEEFGF 84
           L GAK+IL    T + + PKG +AVYVGE Q+KR+LVPISYLN PSF  LLS++EEEFGF
Sbjct: 7   LLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGF 66

Query: 85  NHPTGGLTIPCKEEAFIDVTSRLQ 106
           +HP GGLTIPC E+ FI+VTSR Q
Sbjct: 67  DHPMGGLTIPCPEDTFINVTSRFQ 90

The following BLAST results are available for this feature:

BLAST of Spg000376 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512601.1	4.7e-38	85.71	uncharacterized protein LOC111777295 [Cucurbita pepo subsp. pepo]	[more]
XP_022944373.1	3.0e-37	85.57	auxin-responsive protein SAUR22-like [Cucurbita moschata]	[more]
XP_022986737.1	3.0e-37	85.57	auxin-responsive protein SAUR22-like [Cucurbita maxima]	[more]
KAE8651887.1	1.1e-36	81.63	hypothetical protein Csa_006423 [Cucumis sativus]	[more]
XP_004147010.1	2.0e-36	82.47	auxin-responsive protein SAUR23 [Cucumis sativus]	[more]

BLAST of Spg000376 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJF9	2.8e-25	67.07	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FJG0	3.6e-25	66.67	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	6.1e-25	65.48	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FK62	6.1e-25	65.48	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG1	6.8e-24	64.29	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]

BLAST of Spg000376 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J8E2	1.5e-37	85.57	auxin-responsive protein SAUR22-like OS=Cucurbita maxima OX=3661 GN=LOC111484403...	[more]
A0A6J1FXZ9	1.5e-37	85.57	auxin-responsive protein SAUR22-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A0A0LIZ4	9.5e-37	82.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258710 PE=3 SV=1	[more]
A0A5A7TQ48	6.1e-36	80.41	Auxin-responsive protein SAUR23-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C783	6.1e-36	80.41	auxin-responsive protein SAUR23-like OS=Cucumis melo OX=3656 GN=LOC103497280 PE=...	[more]

BLAST of Spg000376 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	3.6e-28	60.82	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	1.4e-27	57.73	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	5.1e-27	56.19	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	2.0e-26	67.07	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	2.6e-26	66.67	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 30..103 e-value: 1.2E-25 score: 89.5
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 17..106
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 17..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000376.1	Spg000376.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009733	response to auxin
molecular_function	GO:0004842	ubiquitin-protein transferase activity