Spg000245 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000245
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	LOB domain-containing protein
Location	scaffold8: 43689938 .. 43690925 (+)
RNA-Seq Expression	Spg000245
Synteny	Spg000245

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGCTGGTTCATCGCCATGCGCGTCCTGCAAATTGCTGCGGCGGCGGTGCGCCGAGAGCTGCATTTTTGCTCCTTATTTCCCTCCTAATGATCCTCAGAGGTTCGCCATTGTTCATAAGATCTTCGGCGCTAGCAATGTCAGCAAAATGTTGCAGGTCTTTCTTCTTTTCTATGCCCTTTTTCTTCTTTTTAATTGAGTTTCGGGGCCACCCGTGAGGTGGAGAATTTAAGTTTTGAGCGAGGTGACGTTTAGTTTAGACGTGTAATGACTCGATCGTGTTCAGGTTGGCTTATGTCTCTCTAGCTTGTGAGTTGCATGTACGATCAACGTGTTTTGTCTTCTTGATTTAAGAGAATTGTTTAATATACGTCGAGAATTAAATTTCAAAACGGATGTCGAAGAGTGGTAGATTAGGGTTTTAGCCACGTTGTGACAACTACATTCTGGAGCTCAATCCAAAAGCTATGGTAGATTTAATTATATCAACACTTTTATCTGTAGTGAAATAATTTCTCTTAGCTTTGATTTAGGTTAAAAAATCAAACAATTTTATGATTTTCTCTCTAAATTTTAAACCTTTACAAACAACATAGAATAAGGTCTCTTAAGAAAGTTTCTAGCTCTTTCTCTAACAATAGAATGTGATTAATCTTGTGCAGGAGCTACCAATTGATAAGAGAGCAGATGCAGTGAACAGTATAGTATACGAAGCGAGCGCGAGAATGCGAGATCCAGTCTACGGCTGCGTTGGGACAATCTCATTCCTACAAAACGAAGTGTCCCGATTGGAAATGCAGCTAGCGAAGGCGCAGGCTGAGATACTAAGCTTTCAGATGCGGCAACAAGCAGCTCCGACGACATTTCCGACGATGGAGATGGACCTATATGATCAAGATCCAGTTTTTTTCTCACATCCTGCTGATTCTTCTAATTCCATCAATAGTTTTCAAGAAGTTGAAGATTATTGCTCTCTGTGGACCTAA

mRNA sequence

ATGGGAGCTGGTTCATCGCCATGCGCGTCCTGCAAATTGCTGCGGCGGCGGTGCGCCGAGAGCTGCATTTTTGCTCCTTATTTCCCTCCTAATGATCCTCAGAGGTTCGCCATTGTTCATAAGATCTTCGGCGCTAGCAATGTCAGCAAAATGTTGCAGGAGCTACCAATTGATAAGAGAGCAGATGCAGTGAACAGTATAGTATACGAAGCGAGCGCGAGAATGCGAGATCCAGTCTACGGCTGCGTTGGGACAATCTCATTCCTACAAAACGAAGTGTCCCGATTGGAAATGCAGCTAGCGAAGGCGCAGGCTGAGATACTAAGCTTTCAGATGCGGCAACAAGCAGCTCCGACGACATTTCCGACGATGGAGATGGACCTATATGATCAAGATCCAGTTTTTTTCTCACATCCTGCTGATTCTTCTAATTCCATCAATAGTTTTCAAGAAGTTGAAGATTATTGCTCTCTGTGGACCTAA

Coding sequence (CDS)

ATGGGAGCTGGTTCATCGCCATGCGCGTCCTGCAAATTGCTGCGGCGGCGGTGCGCCGAGAGCTGCATTTTTGCTCCTTATTTCCCTCCTAATGATCCTCAGAGGTTCGCCATTGTTCATAAGATCTTCGGCGCTAGCAATGTCAGCAAAATGTTGCAGGAGCTACCAATTGATAAGAGAGCAGATGCAGTGAACAGTATAGTATACGAAGCGAGCGCGAGAATGCGAGATCCAGTCTACGGCTGCGTTGGGACAATCTCATTCCTACAAAACGAAGTGTCCCGATTGGAAATGCAGCTAGCGAAGGCGCAGGCTGAGATACTAAGCTTTCAGATGCGGCAACAAGCAGCTCCGACGACATTTCCGACGATGGAGATGGACCTATATGATCAAGATCCAGTTTTTTTCTCACATCCTGCTGATTCTTCTAATTCCATCAATAGTTTTCAAGAAGTTGAAGATTATTGCTCTCTGTGGACCTAA

Protein sequence

MGAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKRADAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTTFPTMEMDLYDQDPVFFSHPADSSNSINSFQEVEDYCSLWT

Homology

[Close]

BLAST of Spg000245 vs. NCBI nr
Match: KAG6605396.1 (LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035343.1 LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.2 bits (666), Expect = 6.0e-66
Identity = 128/160 (80.00%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   MGAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKR 60
           MGAGSSPCASCKLLRRRCA+ CIFAPYFPPNDP +FAIVHKIFGASNVSKMLQELP+D+R
Sbjct: 1   MGAGSSPCASCKLLRRRCAKDCIFAPYFPPNDPYKFAIVHKIFGASNVSKMLQELPLDQR 60

Query: 61  ADAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTT 120
            DAVNS+VYEASARMRDPVYGCVG I+FLQN+VSRLEMQLA AQAEILSFQM+QQAAP +
Sbjct: 61  PDAVNSMVYEASARMRDPVYGCVGAITFLQNQVSRLEMQLAAAQAEILSFQMQQQAAPAS 120

Query: 121 FPTMEMDLYDQDPVFFSHPADSSNSINSFQEVEDYCSLWT 161
           FP  +M+ YDQ+ VF S+ ADS NS++   EVEDYCSLW+
Sbjct: 121 FPMTQMNQYDQNLVFLSN-ADSFNSVDGSPEVEDYCSLWS 159

[Close]

BLAST of Spg000245 vs. NCBI nr
Match: XP_022947802.1 (LOB domain-containing protein 12-like [Cucurbita moschata])

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-65
Identity = 127/160 (79.38%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   MGAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKR 60
           MGAGSSPCASCKLLRRRCA+ CIFAPYFPP+DP +FAIVHKIFGASNVSKMLQELP+D+R
Sbjct: 1   MGAGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKIFGASNVSKMLQELPLDQR 60

Query: 61  ADAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTT 120
            DAVNS+VYEASARMRDPVYGCVG I+FLQN+VSRLEMQLA AQAEILSFQM+QQAAP +
Sbjct: 61  PDAVNSMVYEASARMRDPVYGCVGAITFLQNQVSRLEMQLAAAQAEILSFQMQQQAAPAS 120

Query: 121 FPTMEMDLYDQDPVFFSHPADSSNSINSFQEVEDYCSLWT 161
           FP  +M+ YDQ+ VF S+ ADS NS++   EVEDYCSLW+
Sbjct: 121 FPMTQMNQYDQNLVFLSN-ADSFNSVDGSPEVEDYCSLWS 159

[Close]

BLAST of Spg000245 vs. NCBI nr
Match: XP_023533075.1 (LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 259.2 bits (661), Expect = 2.3e-65
Identity = 127/160 (79.38%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   MGAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKR 60
           MGAGSSPCASCKLLRRRCA+ CIFAPYFPP+DP +FAIVHKIFGASNVSKMLQELP+D+R
Sbjct: 1   MGAGSSPCASCKLLRRRCAKDCIFAPYFPPDDPYKFAIVHKIFGASNVSKMLQELPLDQR 60

Query: 61  ADAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTT 120
            DAVNS+VYEASARMRDPVYGCVG I+FLQN+VSRLEMQLA AQAEILSFQM+QQAAP +
Sbjct: 61  PDAVNSMVYEASARMRDPVYGCVGAITFLQNQVSRLEMQLAAAQAEILSFQMQQQAAPAS 120

Query: 121 FPTMEMDLYDQDPVFFSHPADSSNSINSFQEVEDYCSLWT 161
           FP  +M+ YDQ+ VF S+ ADS NS++   EVEDYCSLW+
Sbjct: 121 FPMTQMNQYDQNLVFLSN-ADSFNSVDGSPEVEDYCSLWS 159

[Close]

BLAST of Spg000245 vs. NCBI nr
Match: XP_023006803.1 (LOB domain-containing protein 12-like [Cucurbita maxima])

HSP 1 Score: 256.1 bits (653), Expect = 1.9e-64
Identity = 126/160 (78.75%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   MGAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKR 60
           MGAGSSPCASCKLLRRRCA+ CIFAPYFPP+DP +FAIVHKIFGASNVSKMLQELP+D+R
Sbjct: 1   MGAGSSPCASCKLLRRRCAKDCIFAPYFPPDDPYKFAIVHKIFGASNVSKMLQELPLDQR 60

Query: 61  ADAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTT 120
            DAVNS+VYEASARMRDPVYGCVG I+FLQN+VSRLEMQLA AQAEILSFQM+QQAA  +
Sbjct: 61  PDAVNSMVYEASARMRDPVYGCVGAITFLQNQVSRLEMQLAAAQAEILSFQMQQQAASAS 120

Query: 121 FPTMEMDLYDQDPVFFSHPADSSNSINSFQEVEDYCSLWT 161
           FP  +M+ YDQ+ VF S+ ADS NS++   EVEDYCSLW+
Sbjct: 121 FPMTQMNQYDQNLVFLSN-ADSFNSVDGSPEVEDYCSLWS 159

[Close]

BLAST of Spg000245 vs. NCBI nr
Match: XP_008463841.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo])

HSP 1 Score: 238.4 bits (607), Expect = 4.2e-59
Identity = 120/162 (74.07%), Postives = 138/162 (85.19%), Query Frame = 0


Query: 1   MGAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKR 60
           MG GSSPCASCKLLRRRCA+ CIFAPYFPP DP +FAIVHKIFGASNVSKMLQE+PID+R
Sbjct: 1   MGVGSSPCASCKLLRRRCAKDCIFAPYFPPEDPLKFAIVHKIFGASNVSKMLQEVPIDQR 60

Query: 61  ADAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTT 120
           ADAV+S+VYEASARM+DPVYGCVGTI+FLQNEVSRLE+QL  AQAEIL+ QMRQQ   TT
Sbjct: 61  ADAVSSMVYEASARMQDPVYGCVGTIAFLQNEVSRLEIQLGAAQAEILTLQMRQQETSTT 120

Query: 121 FP--TMEMDLYDQDPVFFSHPADSSNSINSFQEVEDYCSLWT 161
           FP  T +MD  +Q+ + FS+  DSSNS++ FQ  EDY  +WT
Sbjct: 121 FPTTTTQMDQDEQNLMIFSN-TDSSNSLHIFQATEDYYHMWT 161

[Close]

BLAST of Spg000245 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-47
Identity = 94/131 (71.76%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 2   GAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKRA 61
           G GSSPCASCKLLRRRCA+ CIFAPYFPP+DP +FAIVHK+FGASNVSKMLQELP+ +RA
Sbjct: 3   GPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 62

Query: 62  DAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTTF 121
           DAVNS+V+EA+AR+RDPVYGCVG IS+LQN+VS+L+MQLA AQAEIL  QM+ +  PT  
Sbjct: 63  DAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNE--PTLQ 122

Query: 122 PTMEMDLYDQD 133
              ++   DQD
Sbjct: 123 SHHQVLELDQD 131

[Close]

BLAST of Spg000245 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-39
Identity = 76/118 (64.41%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 5   SSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKRADAV 64
           +SPCA+CKLLRRRCA+ C+F+PYFP ++PQ+FA VH++FGASNV+KMLQELPI +R DAV
Sbjct: 11  ASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAV 70

Query: 65  NSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTTFP 123
           +S+VYEA+AR+RDPVYGCVG IS LQ ++  L+ QLA AQAE++  ++RQ    T FP
Sbjct: 71  SSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS---TNFP 125

[Close]

BLAST of Spg000245 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37
Identity = 76/162 (46.91%), Postives = 100/162 (61.73%), Query Frame = 0


Query: 6   SPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKRADAVN 65
           SPCA+CK+LRRRCA+ C+ APYFPP DP +F I H++FGASN+ K LQELP  +R DAVN
Sbjct: 54  SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 113

Query: 66  SIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTTFPTME 125
           S+VYEA ARMRDPVYGC G I  LQ +VS L+ QLAK Q E++  Q+++ +       ME
Sbjct: 114 SMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELIYNME 173

Query: 126 M----------------DLYDQDPVFFSHPADSSNSINSFQE 152
                              ++    F S P + SN +   ++
Sbjct: 174 QTKLSVQEQGQQKMSFESSFESGDEFISSPDEESNDLGFLED 215

[Close]

BLAST of Spg000245 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37
Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 6   SPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKRADAVN 65
           SPCA+CK+LRRRCAE C+ APYFPP DP +F I H++FGASN+ K LQELP  +R DAVN
Sbjct: 32  SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 91

Query: 66  SIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQ 115
           S+VYEA AR+RDPVYGC G I  LQ +VS L+ QLAKAQ E+++ Q ++
Sbjct: 92  SMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQR 140

[Close]

BLAST of Spg000245 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 4.0e-36
Identity = 68/118 (57.63%), Postives = 91/118 (77.12%), Query Frame = 0


Query: 6   SPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKRADAVN 65
           +PCA+CKLLRRRCA+ C F+PYF P++P +FA VHK+FGASNVSKML E+P  +RADA N
Sbjct: 44  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAAN 103

Query: 66  SIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTTFPT 124
           S+VYEA+ R+RDPVYGC+G IS LQ +V  L+ +L   ++EIL ++ R+  A    P+
Sbjct: 104 SLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPS 161

[Close]

BLAST of Spg000245 vs. ExPASy TrEMBL
Match: A0A6J1G7F7 (LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111451558 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.5e-66
Identity = 127/160 (79.38%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   MGAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKR 60
           MGAGSSPCASCKLLRRRCA+ CIFAPYFPP+DP +FAIVHKIFGASNVSKMLQELP+D+R
Sbjct: 1   MGAGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKIFGASNVSKMLQELPLDQR 60

Query: 61  ADAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTT 120
            DAVNS+VYEASARMRDPVYGCVG I+FLQN+VSRLEMQLA AQAEILSFQM+QQAAP +
Sbjct: 61  PDAVNSMVYEASARMRDPVYGCVGAITFLQNQVSRLEMQLAAAQAEILSFQMQQQAAPAS 120

Query: 121 FPTMEMDLYDQDPVFFSHPADSSNSINSFQEVEDYCSLWT 161
           FP  +M+ YDQ+ VF S+ ADS NS++   EVEDYCSLW+
Sbjct: 121 FPMTQMNQYDQNLVFLSN-ADSFNSVDGSPEVEDYCSLWS 159

[Close]

BLAST of Spg000245 vs. ExPASy TrEMBL
Match: A0A6J1L5Y7 (LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC111499469 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 9.4e-65
Identity = 126/160 (78.75%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   MGAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKR 60
           MGAGSSPCASCKLLRRRCA+ CIFAPYFPP+DP +FAIVHKIFGASNVSKMLQELP+D+R
Sbjct: 1   MGAGSSPCASCKLLRRRCAKDCIFAPYFPPDDPYKFAIVHKIFGASNVSKMLQELPLDQR 60

Query: 61  ADAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTT 120
            DAVNS+VYEASARMRDPVYGCVG I+FLQN+VSRLEMQLA AQAEILSFQM+QQAA  +
Sbjct: 61  PDAVNSMVYEASARMRDPVYGCVGAITFLQNQVSRLEMQLAAAQAEILSFQMQQQAASAS 120

Query: 121 FPTMEMDLYDQDPVFFSHPADSSNSINSFQEVEDYCSLWT 161
           FP  +M+ YDQ+ VF S+ ADS NS++   EVEDYCSLW+
Sbjct: 121 FPMTQMNQYDQNLVFLSN-ADSFNSVDGSPEVEDYCSLWS 159

[Close]

BLAST of Spg000245 vs. ExPASy TrEMBL
Match: A0A1S3CKM4 (LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103501884 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.0e-59
Identity = 120/162 (74.07%), Postives = 138/162 (85.19%), Query Frame = 0


Query: 1   MGAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKR 60
           MG GSSPCASCKLLRRRCA+ CIFAPYFPP DP +FAIVHKIFGASNVSKMLQE+PID+R
Sbjct: 1   MGVGSSPCASCKLLRRRCAKDCIFAPYFPPEDPLKFAIVHKIFGASNVSKMLQEVPIDQR 60

Query: 61  ADAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTT 120
           ADAV+S+VYEASARM+DPVYGCVGTI+FLQNEVSRLE+QL  AQAEIL+ QMRQQ   TT
Sbjct: 61  ADAVSSMVYEASARMQDPVYGCVGTIAFLQNEVSRLEIQLGAAQAEILTLQMRQQETSTT 120

Query: 121 FP--TMEMDLYDQDPVFFSHPADSSNSINSFQEVEDYCSLWT 161
           FP  T +MD  +Q+ + FS+  DSSNS++ FQ  EDY  +WT
Sbjct: 121 FPTTTTQMDQDEQNLMIFSN-TDSSNSLHIFQATEDYYHMWT 161

[Close]

BLAST of Spg000245 vs. ExPASy TrEMBL
Match: A0A0A0KBK5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G181550 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.0e-54
Identity = 115/163 (70.55%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MGAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKR 60
           MG GSSPCASCKLLRRRCA+ CIFAPYFPP+DP +FAIVHKIFGASNVSKMLQE+P+D+R
Sbjct: 1   MGVGSSPCASCKLLRRRCAKDCIFAPYFPPHDPLKFAIVHKIFGASNVSKMLQEVPVDQR 60

Query: 61  ADAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMR-QQAAPT 120
           ADAV+S+VYEASARM+DPVYGCVG I FLQNEVS+LE+QL  A+AEIL  QMR QQ A  
Sbjct: 61  ADAVSSMVYEASARMQDPVYGCVGKILFLQNEVSQLEIQLGAARAEILMLQMRQQQEASI 120

Query: 121 TFP--TMEMDLYDQDPVFFSHPADSSNSINSFQEVEDYCSLWT 161
           TFP  T +MD  +Q+ +  S+ ADSSNS + FQ  +D+  LWT
Sbjct: 121 TFPMTTTQMDQDEQNLMILSN-ADSSNSFHVFQAADDHYPLWT 162

[Close]

BLAST of Spg000245 vs. ExPASy TrEMBL
Match: A0A2G2XZQ5 (LOB domain-containing protein 12-like OS=Capsicum annuum OX=4072 GN=LOC107874605 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.7e-51
Identity = 106/158 (67.09%), Postives = 127/158 (80.38%), Query Frame = 0


Query: 1   MGAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKR 60
           MG GSSPCASCKLLRRRCA+ CIFAPYFPP+DP +FAIVHK+FGASNVSKMLQELPI +R
Sbjct: 1   MGTGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPIQQR 60

Query: 61  ADAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTT 120
           ADAV+S+VYEA+AR+RDPVYGCVG ISFLQN+VS+L+MQLA AQAEIL  QM+Q+  P  
Sbjct: 61  ADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAQAEILCIQMQQEPVPCN 120

Query: 121 FPTMEMDLYDQDPVFFSHPADSSNSINSF-QEVEDYCS 158
            PT  M+    D + FS   ++SN  N+F   ++ Y S
Sbjct: 121 LPTTLMEPDQLDKLPFSTSNNNSNHNNNFNNNLQQYLS 158

[Close]

BLAST of Spg000245 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 191.0 bits (484), Expect = 7.2e-49
Identity = 94/131 (71.76%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 2   GAGSSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKRA 61
           G GSSPCASCKLLRRRCA+ CIFAPYFPP+DP +FAIVHK+FGASNVSKMLQELP+ +RA
Sbjct: 3   GPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 62

Query: 62  DAVNSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTTF 121
           DAVNS+V+EA+AR+RDPVYGCVG IS+LQN+VS+L+MQLA AQAEIL  QM+ +  PT  
Sbjct: 63  DAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNE--PTLQ 122

Query: 122 PTMEMDLYDQD 133
              ++   DQD
Sbjct: 123 SHHQVLELDQD 131

[Close]

BLAST of Spg000245 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-40
Identity = 76/118 (64.41%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 5   SSPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKRADAV 64
           +SPCA+CKLLRRRCA+ C+F+PYFP ++PQ+FA VH++FGASNV+KMLQELPI +R DAV
Sbjct: 11  ASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAV 70

Query: 65  NSIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTTFP 123
           +S+VYEA+AR+RDPVYGCVG IS LQ ++  L+ QLA AQAE++  ++RQ    T FP
Sbjct: 71  SSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS---TNFP 125

[Close]

BLAST of Spg000245 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38
Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 6   SPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKRADAVN 65
           SPCA+CK+LRRRCAE C+ APYFPP DP +F I H++FGASN+ K LQELP  +R DAVN
Sbjct: 32  SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 91

Query: 66  SIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQ 115
           S+VYEA AR+RDPVYGC G I  LQ +VS L+ QLAKAQ E+++ Q ++
Sbjct: 92  SMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQR 140

[Close]

BLAST of Spg000245 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38
Identity = 76/162 (46.91%), Postives = 100/162 (61.73%), Query Frame = 0


Query: 6   SPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKRADAVN 65
           SPCA+CK+LRRRCA+ C+ APYFPP DP +F I H++FGASN+ K LQELP  +R DAVN
Sbjct: 54  SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 113

Query: 66  SIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTTFPTME 125
           S+VYEA ARMRDPVYGC G I  LQ +VS L+ QLAK Q E++  Q+++ +       ME
Sbjct: 114 SMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELIYNME 173

Query: 126 M----------------DLYDQDPVFFSHPADSSNSINSFQE 152
                              ++    F S P + SN +   ++
Sbjct: 174 QTKLSVQEQGQQKMSFESSFESGDEFISSPDEESNDLGFLED 215

[Close]

BLAST of Spg000245 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-37
Identity = 68/118 (57.63%), Postives = 91/118 (77.12%), Query Frame = 0


Query: 6   SPCASCKLLRRRCAESCIFAPYFPPNDPQRFAIVHKIFGASNVSKMLQELPIDKRADAVN 65
           +PCA+CKLLRRRCA+ C F+PYF P++P +FA VHK+FGASNVSKML E+P  +RADA N
Sbjct: 44  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAAN 103

Query: 66  SIVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLAKAQAEILSFQMRQQAAPTTFPT 124
           S+VYEA+ R+RDPVYGC+G IS LQ +V  L+ +L   ++EIL ++ R+  A    P+
Sbjct: 104 SLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPS 161

The following BLAST results are available for this feature:

BLAST of Spg000245 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605396.1	6.0e-66	80.00	LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022947802.1	1.8e-65	79.38	LOB domain-containing protein 12-like [Cucurbita moschata]	[more]
XP_023533075.1	2.3e-65	79.38	LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo]	[more]
XP_023006803.1	1.9e-64	78.75	LOB domain-containing protein 12-like [Cucurbita maxima]	[more]
XP_008463841.1	4.2e-59	74.07	PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]	[more]

BLAST of Spg000245 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LBW3	1.0e-47	71.76	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	2.2e-39	64.41	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q9SK08	1.6e-37	46.91	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q9LQR0	1.6e-37	64.22	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q8L5T5	4.0e-36	57.63	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of Spg000245 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7F7	8.5e-66	79.38	LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111451...	[more]
A0A6J1L5Y7	9.4e-65	78.75	LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC11149946...	[more]
A0A1S3CKM4	2.0e-59	74.07	LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103501884 PE...	[more]
A0A0A0KBK5	2.0e-54	70.55	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G181550 PE=3 SV...	[more]
A0A2G2XZQ5	2.7e-51	67.09	LOB domain-containing protein 12-like OS=Capsicum annuum OX=4072 GN=LOC107874605...	[more]

BLAST of Spg000245 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30130.1	7.2e-49	71.76	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	1.6e-40	64.41	LOB domain-containing protein 4	[more]
AT1G07900.1	1.1e-38	64.22	LOB domain-containing protein 1	[more]
AT2G28500.1	1.1e-38	46.91	LOB domain-containing protein 11	[more]
AT2G40470.1	2.8e-37	57.63	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..113
None	No IPR available	PANTHER	PTHR31301:SF97	LOB DOMAIN-CONTAINING PROTEIN 12-LIKE	coord: 1..125
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..125
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 7..104 e-value: 1.9E-40 score: 137.4
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 6..107 score: 26.143148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000245.1	Spg000245.1	mRNA