Spg000026 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg000026
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription factor GTE1 isoform X4
Location	scaffold1: 153631 .. 157067 (-)
RNA-Seq Expression	Spg000026
Synteny	Spg000026

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGAGTCACCTGCTGTGGTTTGTTAGTTTTTGTGCTATTTTTTGGGGACTCTTGGGGGAAAGAAACAAGCGGATTTTTAGAGGGATCGAGAGACCTTAGGGTGAGGTGTGATCCCTTGTTAGATATCACGTCTTCCTTTAGGTCTTCTTAGGCCTTATTTTGCTTGACCGGAGCCCCTCCTTAGGCTAATTGGACTCTTCTTGGAGTGCTTTTCTATTCAATGAAAGCATGACTTTTAATATTAAAAAAAAAAAAAAAAACTGCAGCTGTTACATAATTCTTCAAACTCCATAGTCCAAATAAAAAAAATTGAGTTTTAGAATGAAACCCAATAAAAGGAGAAATAGAAAATCATATTGATGGAACATTAAATCGTATATAGATAAATAGAAGCCGGTTGGATCCTTGTATCAAATTCTCCTATCCAAAGAAACTGTGAGTTTTATGTCATGAATAGAACAAAAAATTAAACAACTTCCATATCATTAAGATTTCTTCTGAAAGACAAATTCCAAGAACCTTCCTGAAAGTTTAATATATATTAAGGGAAATTATAAAACAGTTGTAAATTAAGGGAAAACTTGAGGACGGAACTTCTCAAAAGGAGAGGACCCAGGTCAAATATTTCTCCCAGAAGCATATTCTAGAACCAGAATCTAGAATAATTTTCACACGAGAAGACAATGAAGACAGACCTGAGAAAGAAATTTCCAGGACAGTGGTCAAACCATTTCTTTCAACTTCGGGATCCTTAATTGCAAACACCTTATTTACTTTTCATAATAGAAACTTCAAAATCAACTTCGGAATATCTACCACGATTTACTCAAAAGGACTTTAGTTTGAAAAGTAAGAATACCAATTTTTTATCTGCTTGTTCGTGTTGTTCTGGGCCCTTATTTAATGCTCTAAATAATTATTGTATAATTGTTTCCAGATTTCTGAGGCCGATATGAACTTGAAGAGTCTCAGGGAAATGGTTGTCCAGAGATGCAGGTTTGTTATTGTAAAATATGTCTATATGTGGCAAATTTAGGAAAGATTTAGAGGGTTTGTTGTGGATGCAAAAATTATCAAGTGACATAGGGAGGTAATTGGAGACGGTATTTCTGTAATATTGTCCTAAAAGTAAACAATAGAGAGAGATGGTGTTCGTTCAGCTCATTTGAGATCGTTGTTTGAGGTTTGTTCGGGGTATTCATGGGCTGCGTTAAATGTTGTCTTGGACCCAGCTTAAATGAACCTGGCTTGGTAGTGGAACCAAGACATCTAAATTTGCGACCAGCTATAGGCCTTATCACTAAAATTGTTTTTTTAGTGGGATGATTACTTAAGAATAGACTGCCTATCTTTCTTTAATATCATAAGAAATATGAATGGGGGGAGGAGGGTTCACAAAAGTTGATAGTTGGTTTGAAAATTTTGATCAATCCAATCCAAAATTTTTAGGTTGGGTTGGATTATAATTTATAAACATGTTTGGGTTGGGTTTAAAGAATCGAAACTGTATGAGTTAGATTTAGATTAGTTTGTGACTACGAAGCATGGACATGGGCACGAACACGGTACATATATGACATGACACGAACAGAGTATAGGATAAGGATATGGATATGTTGGATTTATTTTTTTTATATATAAATAAAATACCAAGGTAAAAGACCAAATCCTCCAAATTGAGATTTATTAGTCCTTTTCTAGTGGCAGTGAACAAAGAGGAAGTGGTGGAGGAATTCTGGGATGTCAATACCAGGAGCTACTGTTTGAATATGAAAGGAATCTATTACAGGAAGAATTGGGAGAGTTTTCAACACTAATTGAGATAATTGTAGATGTGAGGCTGATGGAACTTGATGGGAGATATTGAAAGCTTAGTTCTTTGGGAGAAATATCTATTAAATACGTATTTCTGGAATCAACAGATTTCAGGTCAAAGAGGTGCTTAAGTGGGAGGGACTAAGAAGGATATGGTGCTTAAAAAATGATGTTTAAATTGAGTCTGTGTCCAAATTGATGTGAAACTTTTGTAATGAGAAAAGGAGAATTATGATTGCGAAGGAATGAAATACTTTGTGATCAGAGCTTGGGTGTATAATTTTCCTTCACGTACAGACTGGCTTAGCAATTAGATCGACAGATTCTAGATGTAATCCTCGGGGTAAGACTTTTAGTAGGTTTTTTTTCCTCTCTCTCTCTTCTTTTTTTCTTTCTTTCTTTCTTCTTCTAGTTCAACAAAGTGGTGGTAAGACTTTTAGTTGTTACTGTCCTTTTCAATCTTTGTTCATTGGAGATTTATTGTTGTTATTATTTTGTGTAATTTTGTAGGTTTATATTCATGTGGAGTGAATGCCTTTTTTTCTTAGTTGGTTTCTTTAATCAAGTGTTTTGTGTGGGAATAATGACTCTTAGGAAAATGTCCACCGAAGAGAAGAGAAAACTTGGAATAGCTCTCACCCGATTGTCGCCTGAAGATCTCACGAAGGCCCTAGAAATAGTTGCTGAGAATAATCCAAACTTTCAAGCAACTGCTCAGGAAGTGGACCTTGACATTGATGCTCAGGTCATGATCTCTCTATGTTTTTGACGTGTCCTTAATTTCAATTCTTTAATGACATTTATTCTGTTAGAAAGGAAATGTTGGGGGCGTTGCTCACTTTAGGCCGTGTCACTAGTCATCGGAAACTTATTGCATTATCTCACCTTTGCAAAACATAGGCGCGGAAGTTTTTAGTACCCCATAATTTGTATATGACTTTGATAAATTTTGAAGGATTACTTATAAAATAACAGTCGTAGTTCCTACACTTTTAGGTTTGTAAGTCCTTGAGCTTTAAAACGTGTCGAAATCAATTTTGTGTTTGATAGCTCCTTGAACTTTTGAAGTATCGAATAAATCTTGAACTTTTAATTTTGTCTAAATTCCAAGGTTTAGGGAAGTACTTCATTCTGATTGTATTTTGATGACTATTTGCTCAACATTTGTTGTGGTCTGAGAAGTGTTTTAAATTTCTTTGTTCAGAATGAGTATACATTGTGGAGGTTAAAAGTCTTCGTTAAAGATGCACTTGCTATAAAAAGCAAGAGTGCTGGATCCATCGACGGAATCAACAATGATAAAATTGATGATAACAAGAAGAATAACTCCAAACGAAGAAGAGAAATTTGTGATGCCCTCGTCAAGTCTGCTATAAAAAGGACTAAAAAAGTTGTCTAATCTGTAACTGATTATTGTTGGCATTAATTACGTTCATTCCATACAATCATCAGTTTGTAATTTTCGCGAGAAAGATGAAGCCACTTGGATCAGGTGGCTATTTCCAACTGCCTACTGAATGCGTTATAATATATAGTTGATATTTTATTACTTGAGTACTCTGATTGTAGCTTCACCATTTTCACAATTGATTATATTCAAGCTCAAGTTCATTTGGG

mRNA sequence

ATGCAAAGAGTCACCTGCTGTGGTTTGTTAGTTTTTGTGCTATTTTTTGGGGACTCTTGGGGGAAAGAAACAAGCGGATTTTTAGAGGGATCGAGAGACCTTAGGATTTCTGAGGCCGATATGAACTTGAAGAGTCTCAGGGAAATGGTTGTCCAGAGATGCAGATTTCAGGTCAAAGAGACTGGCTTAGCAATTAGATCGACAGATTCTAGATGTAATCCTCGGGTGTTTTGTGTGGGAATAATGACTCTTAGGAAAATGTCCACCGAAGAGAAGAGAAAACTTGGAATAGCTCTCACCCGATTGTCGCCTGAAGATCTCACGAAGGCCCTAGAAATAGTTGCTGAGAATAATCCAAACTTTCAAGCAACTGCTCAGGAAGTGGACCTTGACATTGATGCTCAGAATGAGTATACATTGTGGAGGTTAAAAGTCTTCGTTAAAGATGCACTTGCTATAAAAAGCAAGAGTGCTGGATCCATCGACGGAATCAACAATGATAAAATTGATGATAACAAGAAGAATAACTCCAAACGAAGAAGAGAAATTTGTGATGCCCTCGTCAAGTCTGCTATAAAAAGGACTAAAAAAGTTGTCTAA

Coding sequence (CDS)

ATGCAAAGAGTCACCTGCTGTGGTTTGTTAGTTTTTGTGCTATTTTTTGGGGACTCTTGGGGGAAAGAAACAAGCGGATTTTTAGAGGGATCGAGAGACCTTAGGATTTCTGAGGCCGATATGAACTTGAAGAGTCTCAGGGAAATGGTTGTCCAGAGATGCAGATTTCAGGTCAAAGAGACTGGCTTAGCAATTAGATCGACAGATTCTAGATGTAATCCTCGGGTGTTTTGTGTGGGAATAATGACTCTTAGGAAAATGTCCACCGAAGAGAAGAGAAAACTTGGAATAGCTCTCACCCGATTGTCGCCTGAAGATCTCACGAAGGCCCTAGAAATAGTTGCTGAGAATAATCCAAACTTTCAAGCAACTGCTCAGGAAGTGGACCTTGACATTGATGCTCAGAATGAGTATACATTGTGGAGGTTAAAAGTCTTCGTTAAAGATGCACTTGCTATAAAAAGCAAGAGTGCTGGATCCATCGACGGAATCAACAATGATAAAATTGATGATAACAAGAAGAATAACTCCAAACGAAGAAGAGAAATTTGTGATGCCCTCGTCAAGTCTGCTATAAAAAGGACTAAAAAAGTTGTCTAA

Protein sequence

MQRVTCCGLLVFVLFFGDSWGKETSGFLEGSRDLRISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRKMSTEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVKDALAIKSKSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKKVV

Homology

[Close]

BLAST of Spg000026 vs. NCBI nr
Match: XP_022146614.1 (transcription factor GTE1 isoform X1 [Momordica charantia])

HSP 1 Score: 223.0 bits (567), Expect = 2.3e-54
Identity = 125/164 (76.22%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 36  ISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRKMSTEEKRKL 95
           ISEADMNLKSLREMV+QRC                              RKMSTEEKRKL
Sbjct: 283 ISEADMNLKSLREMVIQRC------------------------------RKMSTEEKRKL 342

Query: 96  GIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVKDALAIKS 155
           GIALTRLSPEDLTKALEIVAENNP+FQATAQEVDLDIDAQ++YTLWRLKVFVKDAL IKS
Sbjct: 343 GIALTRLSPEDLTKALEIVAENNPDFQATAQEVDLDIDAQSDYTLWRLKVFVKDALPIKS 402

Query: 156 KSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKKVV 200
           K+AG+I+GINND IDDNKKNNSKRRREICDALVKSAIKRTKKVV
Sbjct: 403 KNAGAIEGINNDIIDDNKKNNSKRRREICDALVKSAIKRTKKVV 416

[Close]

BLAST of Spg000026 vs. NCBI nr
Match: XP_022146617.1 (transcription factor GTE1 isoform X4 [Momordica charantia])

HSP 1 Score: 223.0 bits (567), Expect = 2.3e-54
Identity = 125/164 (76.22%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 36  ISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRKMSTEEKRKL 95
           ISEADMNLKSLREMV+QRC                              RKMSTEEKRKL
Sbjct: 149 ISEADMNLKSLREMVIQRC------------------------------RKMSTEEKRKL 208

Query: 96  GIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVKDALAIKS 155
           GIALTRLSPEDLTKALEIVAENNP+FQATAQEVDLDIDAQ++YTLWRLKVFVKDAL IKS
Sbjct: 209 GIALTRLSPEDLTKALEIVAENNPDFQATAQEVDLDIDAQSDYTLWRLKVFVKDALPIKS 268

Query: 156 KSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKKVV 200
           K+AG+I+GINND IDDNKKNNSKRRREICDALVKSAIKRTKKVV
Sbjct: 269 KNAGAIEGINNDIIDDNKKNNSKRRREICDALVKSAIKRTKKVV 282

[Close]

BLAST of Spg000026 vs. NCBI nr
Match: XP_022146616.1 (transcription factor GTE1 isoform X3 [Momordica charantia])

HSP 1 Score: 223.0 bits (567), Expect = 2.3e-54
Identity = 125/164 (76.22%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 36  ISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRKMSTEEKRKL 95
           ISEADMNLKSLREMV+QRC                              RKMSTEEKRKL
Sbjct: 209 ISEADMNLKSLREMVIQRC------------------------------RKMSTEEKRKL 268

Query: 96  GIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVKDALAIKS 155
           GIALTRLSPEDLTKALEIVAENNP+FQATAQEVDLDIDAQ++YTLWRLKVFVKDAL IKS
Sbjct: 269 GIALTRLSPEDLTKALEIVAENNPDFQATAQEVDLDIDAQSDYTLWRLKVFVKDALPIKS 328

Query: 156 KSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKKVV 200
           K+AG+I+GINND IDDNKKNNSKRRREICDALVKSAIKRTKKVV
Sbjct: 329 KNAGAIEGINNDIIDDNKKNNSKRRREICDALVKSAIKRTKKVV 342

[Close]

BLAST of Spg000026 vs. NCBI nr
Match: XP_022146615.1 (transcription factor GTE1 isoform X2 [Momordica charantia])

HSP 1 Score: 223.0 bits (567), Expect = 2.3e-54
Identity = 125/164 (76.22%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 36  ISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRKMSTEEKRKL 95
           ISEADMNLKSLREMV+QRC                              RKMSTEEKRKL
Sbjct: 249 ISEADMNLKSLREMVIQRC------------------------------RKMSTEEKRKL 308

Query: 96  GIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVKDALAIKS 155
           GIALTRLSPEDLTKALEIVAENNP+FQATAQEVDLDIDAQ++YTLWRLKVFVKDAL IKS
Sbjct: 309 GIALTRLSPEDLTKALEIVAENNPDFQATAQEVDLDIDAQSDYTLWRLKVFVKDALPIKS 368

Query: 156 KSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKKVV 200
           K+AG+I+GINND IDDNKKNNSKRRREICDALVKSAIKRTKKVV
Sbjct: 369 KNAGAIEGINNDIIDDNKKNNSKRRREICDALVKSAIKRTKKVV 382

[Close]

BLAST of Spg000026 vs. NCBI nr
Match: KAG7026375.1 (Transcription factor GTE1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 222.6 bits (566), Expect = 3.0e-54
Identity = 130/176 (73.86%), Postives = 134/176 (76.14%), Query Frame = 0


Query: 27  FLEGS---RDLRISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMT 86
           F EGS     L ISEADMNLK LREMV+QRC                             
Sbjct: 260 FSEGSGVKSPLLISEADMNLKGLREMVIQRC----------------------------- 319

Query: 87  LRKMSTEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRL 146
            RKMSTEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRL
Sbjct: 320 -RKMSTEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRL 379

Query: 147 KVFVKDALAIKSKSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKKVV 200
           KVFVKDALAIKSKSA +ID I+ND IDDNKKNNSK RREICDA+VKSAIKRTKKVV
Sbjct: 380 KVFVKDALAIKSKSAVAIDSIDNDNIDDNKKNNSKGRREICDAVVKSAIKRTKKVV 405

[Close]

BLAST of Spg000026 vs. ExPASy Swiss-Prot
Match: Q84XV2 (Transcription factor GTE1 OS=Arabidopsis thaliana OX=3702 GN=GTE1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.6e-29
Identity = 81/173 (46.82%), Postives = 107/173 (61.85%), Query Frame = 0


Query: 29  EGSRDL--RISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRK 88
           E +RDL   + E D+ L+ LRE VVQRC                              RK
Sbjct: 243 EMARDLSNELYEIDLQLEKLRESVVQRC------------------------------RK 302

Query: 89  MSTEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVF 148
           +ST+EK+ L  AL RLSPEDL+KAL++V+E+NP+F A A EV+LDID Q + TLWRLKVF
Sbjct: 303 LSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVF 362

Query: 149 VKDALAIKSKSAGSIDGINNDKIDDNK--KNNSKRRREICDALVKSAIKRTKK 198
           V++AL   +KS+G  +  NN+     +  KNN+KRRREI DA+ K++IKR KK
Sbjct: 363 VQEALKAANKSSGGTNAQNNNNTGTGEINKNNAKRRREISDAINKASIKRAKK 385

[Close]

BLAST of Spg000026 vs. ExPASy Swiss-Prot
Match: Q9FT54 (Transcription factor GTE6 OS=Arabidopsis thaliana OX=3702 GN=GTE6 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.7e-16
Identity = 59/169 (34.91%), Postives = 92/169 (54.44%), Query Frame = 0


Query: 29  EGSRDLRISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRKMS 88
           + +++  +++   ++K+ RE+  + C     E    +R    RC            RK++
Sbjct: 215 QAAKEALLAKEASHIKTTRELGNEICHAN-DELEKLMRKVVERC------------RKIT 274

Query: 89  TEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVK 148
            EEKR +G+AL +LSP+DL K L IVA+ NP+FQ  A+EV +++D  +E TLWRLK FVK
Sbjct: 275 IEEKRNIGLALLKLSPDDLQKVLGIVAQANPSFQPRAEEVSIEMDILDEPTLWRLKFFVK 334

Query: 149 DALAIKSKSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKK 198
           DAL    K     +    +     KK  SK+R    +A  K A ++TK+
Sbjct: 335 DALDNAMKKKKEEETKTRELSGAQKKEVSKKR----NATTKLAERKTKR 366

[Close]

BLAST of Spg000026 vs. ExPASy Swiss-Prot
Match: Q7Y214 (Transcription factor GTE7 OS=Arabidopsis thaliana OX=3702 GN=GTE7 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.3e-06
Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 85  RKMSTEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLK 144
           R M+ EEK KLG+ L  L PE L + L+I+ + N +      E++LDI+A +  TLW L 
Sbjct: 402 RLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAVDNETLWELD 461

Query: 145 VFVKD--ALAIKSKSAGSIDGIN 166
            FV +   +A K K  G I  ++
Sbjct: 462 RFVTNYKKMASKIKRQGFIRNVS 484

[Close]

BLAST of Spg000026 vs. ExPASy Swiss-Prot
Match: Q9LXA7 (Transcription factor GTE2 OS=Arabidopsis thaliana OX=3702 GN=GTE2 PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-05
Identity = 29/83 (34.94%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 85  RKMSTEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLK 144
           R+M+ +EK KLG+ L  L PE L + ++I+ +   +      E++LDI+A +  TLW L 
Sbjct: 397 REMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELDIEALDNETLWELD 456

Query: 145 VFVKD--ALAIKSKSAGSIDGIN 166
            FV +   +A K K  G I  ++
Sbjct: 457 RFVTNYRKMASKIKRQGFIQNVS 479

[Close]

BLAST of Spg000026 vs. ExPASy TrEMBL
Match: A0A6J1CZW9 (transcription factor GTE1 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111015773 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.1e-54
Identity = 125/164 (76.22%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 36  ISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRKMSTEEKRKL 95
           ISEADMNLKSLREMV+QRC                              RKMSTEEKRKL
Sbjct: 209 ISEADMNLKSLREMVIQRC------------------------------RKMSTEEKRKL 268

Query: 96  GIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVKDALAIKS 155
           GIALTRLSPEDLTKALEIVAENNP+FQATAQEVDLDIDAQ++YTLWRLKVFVKDAL IKS
Sbjct: 269 GIALTRLSPEDLTKALEIVAENNPDFQATAQEVDLDIDAQSDYTLWRLKVFVKDALPIKS 328

Query: 156 KSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKKVV 200
           K+AG+I+GINND IDDNKKNNSKRRREICDALVKSAIKRTKKVV
Sbjct: 329 KNAGAIEGINNDIIDDNKKNNSKRRREICDALVKSAIKRTKKVV 342

[Close]

BLAST of Spg000026 vs. ExPASy TrEMBL
Match: A0A6J1CXQ8 (transcription factor GTE1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015773 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.1e-54
Identity = 125/164 (76.22%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 36  ISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRKMSTEEKRKL 95
           ISEADMNLKSLREMV+QRC                              RKMSTEEKRKL
Sbjct: 249 ISEADMNLKSLREMVIQRC------------------------------RKMSTEEKRKL 308

Query: 96  GIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVKDALAIKS 155
           GIALTRLSPEDLTKALEIVAENNP+FQATAQEVDLDIDAQ++YTLWRLKVFVKDAL IKS
Sbjct: 309 GIALTRLSPEDLTKALEIVAENNPDFQATAQEVDLDIDAQSDYTLWRLKVFVKDALPIKS 368

Query: 156 KSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKKVV 200
           K+AG+I+GINND IDDNKKNNSKRRREICDALVKSAIKRTKKVV
Sbjct: 369 KNAGAIEGINNDIIDDNKKNNSKRRREICDALVKSAIKRTKKVV 382

[Close]

BLAST of Spg000026 vs. ExPASy TrEMBL
Match: A0A6J1CYL1 (transcription factor GTE1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015773 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.1e-54
Identity = 125/164 (76.22%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 36  ISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRKMSTEEKRKL 95
           ISEADMNLKSLREMV+QRC                              RKMSTEEKRKL
Sbjct: 283 ISEADMNLKSLREMVIQRC------------------------------RKMSTEEKRKL 342

Query: 96  GIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVKDALAIKS 155
           GIALTRLSPEDLTKALEIVAENNP+FQATAQEVDLDIDAQ++YTLWRLKVFVKDAL IKS
Sbjct: 343 GIALTRLSPEDLTKALEIVAENNPDFQATAQEVDLDIDAQSDYTLWRLKVFVKDALPIKS 402

Query: 156 KSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKKVV 200
           K+AG+I+GINND IDDNKKNNSKRRREICDALVKSAIKRTKKVV
Sbjct: 403 KNAGAIEGINNDIIDDNKKNNSKRRREICDALVKSAIKRTKKVV 416

[Close]

BLAST of Spg000026 vs. ExPASy TrEMBL
Match: A0A6J1D026 (transcription factor GTE1 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111015773 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.1e-54
Identity = 125/164 (76.22%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 36  ISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRKMSTEEKRKL 95
           ISEADMNLKSLREMV+QRC                              RKMSTEEKRKL
Sbjct: 149 ISEADMNLKSLREMVIQRC------------------------------RKMSTEEKRKL 208

Query: 96  GIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVKDALAIKS 155
           GIALTRLSPEDLTKALEIVAENNP+FQATAQEVDLDIDAQ++YTLWRLKVFVKDAL IKS
Sbjct: 209 GIALTRLSPEDLTKALEIVAENNPDFQATAQEVDLDIDAQSDYTLWRLKVFVKDALPIKS 268

Query: 156 KSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKKVV 200
           K+AG+I+GINND IDDNKKNNSKRRREICDALVKSAIKRTKKVV
Sbjct: 269 KNAGAIEGINNDIIDDNKKNNSKRRREICDALVKSAIKRTKKVV 282

[Close]

BLAST of Spg000026 vs. ExPASy TrEMBL
Match: A0A6J1EEP1 (transcription factor GTE1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433659 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 3.2e-54
Identity = 127/171 (74.27%), Postives = 133/171 (77.78%), Query Frame = 0


Query: 31  SRDL--RISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRKMS 90
           +RD+   ISEADMNLK LREMV+QRC                              RKMS
Sbjct: 242 ARDISNEISEADMNLKGLREMVIQRC------------------------------RKMS 301

Query: 91  TEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVK 150
           TEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVK
Sbjct: 302 TEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVK 361

Query: 151 DALAIKSKSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKKVV 200
           DALAIKSKSA +ID I+ND IDDNKKNNSK RREICDA+VKSAIKRTKKVV
Sbjct: 362 DALAIKSKSAVAIDSIDNDNIDDNKKNNSKGRREICDAVVKSAIKRTKKVV 382

[Close]

BLAST of Spg000026 vs. TAIR 10
Match: AT2G34900.2 (Transcription factor GTE6 )

HSP 1 Score: 128.6 bits (322), Expect = 5.4e-30
Identity = 81/173 (46.82%), Postives = 107/173 (61.85%), Query Frame = 0


Query: 29  EGSRDL--RISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRK 88
           E +RDL   + E D+ L+ LRE VVQRC                              RK
Sbjct: 133 EMARDLSNELYEIDLQLEKLRESVVQRC------------------------------RK 192

Query: 89  MSTEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVF 148
           +ST+EK+ L  AL RLSPEDL+KAL++V+E+NP+F A A EV+LDID Q + TLWRLKVF
Sbjct: 193 LSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVF 252

Query: 149 VKDALAIKSKSAGSIDGINNDKIDDNK--KNNSKRRREICDALVKSAIKRTKK 198
           V++AL   +KS+G  +  NN+     +  KNN+KRRREI DA+ K++IKR KK
Sbjct: 253 VQEALKAANKSSGGTNAQNNNNTGTGEINKNNAKRRREISDAINKASIKRAKK 275

[Close]

BLAST of Spg000026 vs. TAIR 10
Match: AT2G34900.1 (Transcription factor GTE6 )

HSP 1 Score: 128.6 bits (322), Expect = 5.4e-30
Identity = 81/173 (46.82%), Postives = 107/173 (61.85%), Query Frame = 0


Query: 29  EGSRDL--RISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRK 88
           E +RDL   + E D+ L+ LRE VVQRC                              RK
Sbjct: 243 EMARDLSNELYEIDLQLEKLRESVVQRC------------------------------RK 302

Query: 89  MSTEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVF 148
           +ST+EK+ L  AL RLSPEDL+KAL++V+E+NP+F A A EV+LDID Q + TLWRLKVF
Sbjct: 303 LSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVF 362

Query: 149 VKDALAIKSKSAGSIDGINNDKIDDNK--KNNSKRRREICDALVKSAIKRTKK 198
           V++AL   +KS+G  +  NN+     +  KNN+KRRREI DA+ K++IKR KK
Sbjct: 363 VQEALKAANKSSGGTNAQNNNNTGTGEINKNNAKRRREISDAINKASIKRAKK 385

[Close]

BLAST of Spg000026 vs. TAIR 10
Match: AT3G52280.1 (general transcription factor group E6 )

HSP 1 Score: 85.1 bits (209), Expect = 6.9e-17
Identity = 59/169 (34.91%), Postives = 92/169 (54.44%), Query Frame = 0


Query: 29  EGSRDLRISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRKMS 88
           + +++  +++   ++K+ RE+  + C     E    +R    RC            RK++
Sbjct: 215 QAAKEALLAKEASHIKTTRELGNEICHAN-DELEKLMRKVVERC------------RKIT 274

Query: 89  TEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVK 148
            EEKR +G+AL +LSP+DL K L IVA+ NP+FQ  A+EV +++D  +E TLWRLK FVK
Sbjct: 275 IEEKRNIGLALLKLSPDDLQKVLGIVAQANPSFQPRAEEVSIEMDILDEPTLWRLKFFVK 334

Query: 149 DALAIKSKSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKK 198
           DAL    K     +    +     KK  SK+R    +A  K A ++TK+
Sbjct: 335 DALDNAMKKKKEEETKTRELSGAQKKEVSKKR----NATTKLAERKTKR 366

[Close]

BLAST of Spg000026 vs. TAIR 10
Match: AT3G52280.2 (general transcription factor group E6 )

HSP 1 Score: 85.1 bits (209), Expect = 6.9e-17
Identity = 59/169 (34.91%), Postives = 92/169 (54.44%), Query Frame = 0


Query: 29  EGSRDLRISEADMNLKSLREMVVQRCRFQVKETGLAIRSTDSRCNPRVFCVGIMTLRKMS 88
           + +++  +++   ++K+ RE+  + C     E    +R    RC            RK++
Sbjct: 232 QAAKEALLAKEASHIKTTRELGNEICHAN-DELEKLMRKVVERC------------RKIT 291

Query: 89  TEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLKVFVK 148
            EEKR +G+AL +LSP+DL K L IVA+ NP+FQ  A+EV +++D  +E TLWRLK FVK
Sbjct: 292 IEEKRNIGLALLKLSPDDLQKVLGIVAQANPSFQPRAEEVSIEMDILDEPTLWRLKFFVK 351

Query: 149 DALAIKSKSAGSIDGINNDKIDDNKKNNSKRRREICDALVKSAIKRTKK 198
           DAL    K     +    +     KK  SK+R    +A  K A ++TK+
Sbjct: 352 DALDNAMKKKKEEETKTRELSGAQKKEVSKKR----NATTKLAERKTKR 383

[Close]

BLAST of Spg000026 vs. TAIR 10
Match: AT5G65630.1 (global transcription factor group E7 )

HSP 1 Score: 52.8 bits (125), Expect = 3.8e-07
Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 85  RKMSTEEKRKLGIALTRLSPEDLTKALEIVAENNPNFQATAQEVDLDIDAQNEYTLWRLK 144
           R M+ EEK KLG+ L  L PE L + L+I+ + N +      E++LDI+A +  TLW L 
Sbjct: 402 RLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAVDNETLWELD 461

Query: 145 VFVKD--ALAIKSKSAGSIDGIN 166
            FV +   +A K K  G I  ++
Sbjct: 462 RFVTNYKKMASKIKRQGFIRNVS 484

The following BLAST results are available for this feature:

BLAST of Spg000026 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146614.1	2.3e-54	76.22	transcription factor GTE1 isoform X1 [Momordica charantia]	[more]
XP_022146617.1	2.3e-54	76.22	transcription factor GTE1 isoform X4 [Momordica charantia]	[more]
XP_022146616.1	2.3e-54	76.22	transcription factor GTE1 isoform X3 [Momordica charantia]	[more]
XP_022146615.1	2.3e-54	76.22	transcription factor GTE1 isoform X2 [Momordica charantia]	[more]
KAG7026375.1	3.0e-54	73.86	Transcription factor GTE1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Spg000026 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84XV2	7.6e-29	46.82	Transcription factor GTE1 OS=Arabidopsis thaliana OX=3702 GN=GTE1 PE=1 SV=1	[more]
Q9FT54	9.7e-16	34.91	Transcription factor GTE6 OS=Arabidopsis thaliana OX=3702 GN=GTE6 PE=2 SV=1	[more]
Q7Y214	5.3e-06	38.55	Transcription factor GTE7 OS=Arabidopsis thaliana OX=3702 GN=GTE7 PE=2 SV=1	[more]
Q9LXA7	1.2e-05	34.94	Transcription factor GTE2 OS=Arabidopsis thaliana OX=3702 GN=GTE2 PE=2 SV=2	[more]

BLAST of Spg000026 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZW9	1.1e-54	76.22	transcription factor GTE1 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1CXQ8	1.1e-54	76.22	transcription factor GTE1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1CYL1	1.1e-54	76.22	transcription factor GTE1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1D026	1.1e-54	76.22	transcription factor GTE1 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1EEP1	3.2e-54	74.27	transcription factor GTE1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Spg000026 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34900.2	5.4e-30	46.82	Transcription factor GTE6	[more]
AT2G34900.1	5.4e-30	46.82	Transcription factor GTE6	[more]
AT3G52280.1	6.9e-17	34.91	general transcription factor group E6	[more]
AT3G52280.2	6.9e-17	34.91	general transcription factor group E6	[more]
AT5G65630.1	3.8e-07	38.55	global transcription factor group E7	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027353	NET domain	PFAM	PF17035	BET	coord: 86..149 e-value: 2.1E-18 score: 66.3
IPR027353	NET domain	PROSITE	PS51525	NET	coord: 77..158 score: 16.146097
IPR038336	NET domain superfamily	GENE3D	1.20.1270.220		coord: 83..157 e-value: 5.4E-17 score: 63.6
None	No IPR available	PANTHER	PTHR45926	OSJNBA0053K19.4 PROTEIN	coord: 36..179
None	No IPR available	PANTHER	PTHR45926:SF1	TRANSCRIPTION FACTOR GTE6	coord: 36..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg000026.1	Spg000026.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus