Sgr030525 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr030525
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	zinc finger Ran-binding domain-containing protein 2-like
Location	tig00154107: 1229613 .. 1229915 (-)
RNA-Seq Expression	Sgr030525
Synteny	Sgr030525

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATATGAATTGGTCGGGAGGTGACTGGATGTGTGGTGTGTGTGAACACGTGAACTTCAAGAAGAGGGAAGCCTGTCAACGATGTGGATATCCGAAATATGGTGGTCCGGACCCAACAACATATGAATACAACAAGACAGAAGTTTTGGCTGGAGATTGGTATTGCAATTGTGGAGCTCACAACTATGCTAGCAGATCAAGCTGCTATCGATGTAATGCATTTAAGAATGTCGATATTGGTGCCTTGCCTGGTTGGAAATCTGGAGATTGGATTTGCAGTAGGTTAGTGTTTATTTCGTGA

mRNA sequence

ATGAATATGAATTGGTCGGGAGGTGACTGGATGTGTGGTGTGTGTGAACACGTGAACTTCAAGAAGAGGGAAGCCTGTCAACGATGTGGATATCCGAAATATGGTGGTCCGGACCCAACAACATATGAATACAACAAGACAGAAGTTTTGGCTGGAGATTGGTATTGCAATTGTGGAGCTCACAACTATGCTAGCAGATCAAGCTGCTATCGATGTAATGCATTTAAGAATGTCGATATTGGTGCCTTGCCTGGTTGGAAATCTGGAGATTGGATTTGCAGTAGGTTAGTGTTTATTTCGTGA

Coding sequence (CDS)

ATGAATATGAATTGGTCGGGAGGTGACTGGATGTGTGGTGTGTGTGAACACGTGAACTTCAAGAAGAGGGAAGCCTGTCAACGATGTGGATATCCGAAATATGGTGGTCCGGACCCAACAACATATGAATACAACAAGACAGAAGTTTTGGCTGGAGATTGGTATTGCAATTGTGGAGCTCACAACTATGCTAGCAGATCAAGCTGCTATCGATGTAATGCATTTAAGAATGTCGATATTGGTGCCTTGCCTGGTTGGAAATCTGGAGATTGGATTTGCAGTAGGTTAGTGTTTATTTCGTGA

Protein sequence

MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYASRSSCYRCNAFKNVDIGALPGWKSGDWICSRLVFIS

Homology

[Close]

BLAST of Sgr030525 vs. NCBI nr
Match: XP_022966014.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima])

HSP 1 Score: 220.7 bits (561), Expect = 5.7e-54
Identity = 89/96 (92.71%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGA 60
          MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE+NKTEVLAGDWYC+CGA
Sbjct: 1  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEFNKTEVLAGDWYCHCGA 60

Query: 61 HNYASRSSCYRCNAFKNVDIGALPGWKSGDWICSRL 97
          HNYASRSSCYRCNA+K+ DIGALPGWKSGDWIC+R+
Sbjct: 61 HNYASRSSCYRCNAYKSADIGALPGWKSGDWICNRI 96

[Close]

BLAST of Sgr030525 vs. NCBI nr
Match: XP_023538268.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.2 bits (557), Expect = 1.6e-53
Identity = 88/96 (91.67%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGA 60
          MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGA
Sbjct: 1  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGA 60

Query: 61 HNYASRSSCYRCNAFKNVDIGALPGWKSGDWICSRL 97
          HNYASRSSCYRCNA+K+ DIGALPGWKSGDWIC+R+
Sbjct: 61 HNYASRSSCYRCNAYKSADIGALPGWKSGDWICNRI 96

[Close]

BLAST of Sgr030525 vs. NCBI nr
Match: KAG6586405.1 (hypothetical protein SDJN03_19138, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 216.9 bits (551), Expect = 8.2e-53
Identity = 87/96 (90.62%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGA 60
          MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGA
Sbjct: 1  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGA 60

Query: 61 HNYASRSSCYRCNAFKNVDIGALPGWKSGDWICSRL 97
          HNYASR SCYRCNA+K+ DIGALPGWKSGDWIC+R+
Sbjct: 61 HNYASRLSCYRCNAYKSADIGALPGWKSGDWICNRI 96

[Close]

BLAST of Sgr030525 vs. NCBI nr
Match: XP_022937997.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 215.7 bits (548), Expect = 1.8e-52
Identity = 87/96 (90.62%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGA 60
          MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGA
Sbjct: 1  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGA 60

Query: 61 HNYASRSSCYRCNAFKNVDIGALPGWKSGDWICSRL 97
          HNYASRSSCYRCNA+K+ DI ALPGWKSGDWIC+R+
Sbjct: 61 HNYASRSSCYRCNAYKSADICALPGWKSGDWICNRI 96

[Close]

BLAST of Sgr030525 vs. NCBI nr
Match: XP_022143171.1 (uncharacterized RNA-binding protein C17H9.04c-like [Momordica charantia])

HSP 1 Score: 208.4 bits (529), Expect = 2.9e-50
Identity = 90/102 (88.24%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTE---VLAGDWYCN 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEY+KT+   +LAGDWYCN
Sbjct: 3   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCN 62

Query: 61  CGAHNYASRSSCYRC--NAFKNVD-IGALPGWKSGDWICSRL 97
           CGAHNYASRS+CYRC  NAFKNVD IGALPGWKSGDWIC+R+
Sbjct: 63  CGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICTRI 104

[Close]

BLAST of Sgr030525 vs. ExPASy TrEMBL
Match: A0A6J1HSH3 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465727 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.7e-54
Identity = 89/96 (92.71%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGA 60
          MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE+NKTEVLAGDWYC+CGA
Sbjct: 1  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEFNKTEVLAGDWYCHCGA 60

Query: 61 HNYASRSSCYRCNAFKNVDIGALPGWKSGDWICSRL 97
          HNYASRSSCYRCNA+K+ DIGALPGWKSGDWIC+R+
Sbjct: 61 HNYASRSSCYRCNAYKSADIGALPGWKSGDWICNRI 96

[Close]

BLAST of Sgr030525 vs. ExPASy TrEMBL
Match: A0A6J1FCS1 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111444219 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 8.8e-53
Identity = 87/96 (90.62%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGA 60
          MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGA
Sbjct: 1  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGA 60

Query: 61 HNYASRSSCYRCNAFKNVDIGALPGWKSGDWICSRL 97
          HNYASRSSCYRCNA+K+ DI ALPGWKSGDWIC+R+
Sbjct: 61 HNYASRSSCYRCNAYKSADICALPGWKSGDWICNRI 96

[Close]

BLAST of Sgr030525 vs. ExPASy TrEMBL
Match: A0A6J1CPG4 (uncharacterized RNA-binding protein C17H9.04c-like OS=Momordica charantia OX=3673 GN=LOC111013106 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.4e-50
Identity = 90/102 (88.24%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTE---VLAGDWYCN 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEY+KT+   +LAGDWYCN
Sbjct: 3   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCN 62

Query: 61  CGAHNYASRSSCYRC--NAFKNVD-IGALPGWKSGDWICSRL 97
           CGAHNYASRS+CYRC  NAFKNVD IGALPGWKSGDWIC+R+
Sbjct: 63  CGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICTRI 104

[Close]

BLAST of Sgr030525 vs. ExPASy TrEMBL
Match: A0A0A0LIX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006080 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 7.7e-49
Identity = 88/105 (83.81%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY +YN        EVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRC--NAFKNVDIGALPGWKSGDWICSRL 97
           WYCNCGAHNYASRSSCY+C  NA+K++DIGALPGWKSGDWICSR+
Sbjct: 61  WYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRI 105

[Close]

BLAST of Sgr030525 vs. ExPASy TrEMBL
Match: A0A1S3C6B6 (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103497392 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48
Identity = 88/105 (83.81%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY +YN        EVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCNCGAHNYASRSSCYRC--NAFKNVDIGALPGWKSGDWICSRL 97
           WYCNCGAHNYASRSSCYRC  NA+K++DIGALPGWKSGDWICSR+
Sbjct: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRI 105

[Close]

BLAST of Sgr030525 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 4.2e-39
Identity = 64/113 (56.64%), Postives = 80/113 (70.80%), Query Frame = 0


Query: 3   MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYC---NCG 62
           M+W+GGDW+CG C+H NFKKRE+CQ+CGYPK+GG D +TY YN+TEV+AGDWYC   NCG
Sbjct: 1   MSWTGGDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTYLYNRTEVMAGDWYCGALNCG 60

Query: 63  AHNYASRSSCYRCN----------------AFKNVDIGALPGWKSGDWICSRL 97
           +HNYASR+SCYRC                 A+ N      PGWK+GDW+C R+
Sbjct: 61  SHNYASRTSCYRCGMIKVEYTEQYYGAQMVAYGNDGAACPPGWKTGDWVCPRV 113

[Close]

BLAST of Sgr030525 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 2.6e-20
Identity = 47/132 (35.61%), Postives = 66/132 (50.00%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPTTYEYNK-TEVLAGD 67
           GDW C  C H+NF++R++CQRCG             +  +GG   + + +   ++V  GD
Sbjct: 5   GDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDVRPGD 64

Query: 68  WYC---NCGAHNYASRSSCYRCNAFK------------------NVDI--------GALP 97
           WYC   NCG HN+ASRS+C++C  FK                  + DI        G   
Sbjct: 65  WYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRS 124

[Close]

BLAST of Sgr030525 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 7.4e-20
Identity = 48/137 (35.04%), Postives = 68/137 (49.64%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCGYPKYGG------------PDPTTYEYNK-TEVLAGDW 67
           GDW C +C H+NF++R++CQRC  P+ GG            P  +++ +N   +V  GDW
Sbjct: 5   GDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDW 64

Query: 68  YCN---CGAHNYASRSSCYRCNA---------------FKNVDIGALPG----------- 96
           YCN   CG HN+A+RSSC++C A               F ++++G   G           
Sbjct: 65  YCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGG 124

[Close]

BLAST of Sgr030525 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 57.8 bits (138), Expect = 5.9e-09
Identity = 32/109 (29.36%), Postives = 45/109 (41.28%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCGYPK--------------------YGGPDPTTYEY--- 67
           GDW+C  C + N+  RE C++CG  K                    Y    P +++    
Sbjct: 50  GDWICTGCTNNNYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQPGS 109

Query: 68  -----NKT-------EVLAGDWYCNCGAHNYASRSSCYRCNAFKNVDIG 82
                N T       E  +GDW C CG HNY+SR  C +CN    + +G
Sbjct: 110 LLAFSNATNQASVHKEWRSGDWICRCGFHNYSSRIQCKKCNEIAPLALG 158

[Close]

BLAST of Sgr030525 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 41.2 bits (95), Expect = 5.7e-04
Identity = 19/66 (28.79%), Postives = 29/66 (43.94%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYC-NCGAHNYASR 67
           GDW C  C ++NF   + C+ C   ++           KT    GDW C +C   N+   
Sbjct: 378 GDWNCTGCGYMNFASNKQCRECREQRH-----------KTLAEPGDWECPSCDFVNFRRN 432

Query: 68  SSCYRC 73
            +C +C
Sbjct: 438 DACKKC 432

The following BLAST results are available for this feature:

BLAST of Sgr030525 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966014.1	5.7e-54	92.71	zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima]	[more]
XP_023538268.1	1.6e-53	91.67	zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. ...	[more]
KAG6586405.1	8.2e-53	90.63	hypothetical protein SDJN03_19138, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022937997.1	1.8e-52	90.63	zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata]	[more]
XP_022143171.1	2.9e-50	88.24	uncharacterized RNA-binding protein C17H9.04c-like [Momordica charantia]	[more]

BLAST of Sgr030525 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr030525 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HSH3	2.7e-54	92.71	zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=...	[more]
A0A6J1FCS1	8.8e-53	90.63	zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita moschata O...	[more]
A0A6J1CPG4	1.4e-50	88.24	uncharacterized RNA-binding protein C17H9.04c-like OS=Momordica charantia OX=367...	[more]
A0A0A0LIX1	7.7e-49	83.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006080 PE=4 SV=1	[more]
A0A1S3C6B6	1.0e-48	83.81	uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Sgr030525 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26695.1	4.2e-39	56.64	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT3G15680.1	2.6e-20	35.61	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	7.4e-20	35.04	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G17975.1	5.9e-09	29.36	zinc finger (Ran-binding) family protein	[more]
AT1G48570.1	5.7e-04	28.79	zinc finger (Ran-binding) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 8..32 e-value: 4.3E-6 score: 36.2 coord: 52..75 e-value: 0.001 score: 28.4
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 8..34 e-value: 2.0E-4 score: 20.6
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 10..29
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 6..35 score: 8.817719
None	No IPR available	GENE3D	4.10.1060.10		coord: 42..78 e-value: 3.8E-10 score: 40.9 coord: 1..37 e-value: 4.6E-10 score: 40.6
None	No IPR available	PANTHER	PTHR23111:SF41	ZINC FINGER, RANBP2-TYPE-RELATED	coord: 2..96
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 2..96
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 2..36
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 45..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr030525.1	Sgr030525.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding