Sgr030171 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr030171
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Descriptionfarnesyl pyrophosphate synthase 1
Locationtig00153574: 1026388 .. 1027138 (+)
RNA-Seq ExpressionSgr030171
SyntenySgr030171
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAAATCTAAACACGTGATCCGCAACGTTCGTGGTACACTGTTCTTCGTAGCAACACGTGATTTCGCAGTTTCTATTCAGTACACGCAGCTCCACTCACTTAGCACCTCGTGTTAAACGTGGATAGCAACTTCTAATGATCAAATGCAATAAGATCTCGCCACGTGTCCCATCATCGCTTCCCGTATAAAAGGCGACACCCACTGGATTTCTAACCTCACCAAGATTGTTTCCGAATTACGAAAATGCCCTTTCCATCATCAAGCTGATAGAGCGGCTTAGCTGTCCGAATCTGAAATTCAGGAGAAGAGAGAGAGAGAGAGAGAGAGTTGAATGTCCGAGAAAACGAACCGGAGGCCCCAACTGTTTTTCAACGTTGAATTGTGAAGCGAAGAGAGATCGCATCAGTGTTGATTCTGTTCGGTTTTTCGTTTCTGCGCTCTCGCATTATTCCTTGTCCATGGCGGATCTCAAGTCAACCTTCCTCAAGGTCTACTCGGTTCTGAAAGAAGAGCTTCTCCAGGACCCTGCCTTCGAGTTTACTGACGCTTCTCGCCAATGGATCGAACGGGTACCATCTCTAATTCTTCTCCATTCGTTTCAGCTCTTCATGCTTTTCCCTTCCTCGTTCGCAAATGGATACATTCTCCATCTTGTTTCTCCGTCGATTTTGATATGTGAAAATCCGAAGGCTAAAGCTCTGAAGGGATTTGTTTATGTTAATGGGTATAGTTTGACCTTTGGATAG

mRNA sequence

ATGCCAAAATCTAAACACGTGATCCGCAACGTTCGTGGTACACTGTTCTTCGTAGCAACACGTGATTTCGCAGTTTCTATTCAATTGTTTCCGAATTACGAAAATGCCCTTTCCATCATCAAGCTGATAGAGCGGCTTAGCTGTCCGAATCTGAAATTCAGGAGAAGAGAGAGAGAGAGAGAGAGAGTTGAATGTCCGAGAAAACGAACCGGAGGCCCCAACTGTTTTTCAACGTTGAATTGTGAAGCGAAGAGAGATCGCATCAGTGTTGATTCTGTTCGGTTTTTCGTTTCTGCGCTCTCGCATTATTCCTTGTCCATGGCGGATCTCAAGTCAACCTTCCTCAAGGTCTACTCGGTTCTGAAAGAAGAGCTTCTCCAGGACCCTGCCTTCGAGTTTACTGACGCTTCTCGCCAATGGATCGAACGGGTACCATCTCTAATTCTTCTCCATTCGTTTCAGCTCTTCATGCTTTTCCCTTCCTCGTTCGCAAATGGATACATTCTCCATCTTGTTTCTCCGTCGATTTTGATATGTGAAAATCCGAAGGCTAAAGCTCTGAAGGGATTTGTTTATGTTAATGGGTATAGTTTGACCTTTGGATAG

Coding sequence (CDS)

ATGCCAAAATCTAAACACGTGATCCGCAACGTTCGTGGTACACTGTTCTTCGTAGCAACACGTGATTTCGCAGTTTCTATTCAATTGTTTCCGAATTACGAAAATGCCCTTTCCATCATCAAGCTGATAGAGCGGCTTAGCTGTCCGAATCTGAAATTCAGGAGAAGAGAGAGAGAGAGAGAGAGAGTTGAATGTCCGAGAAAACGAACCGGAGGCCCCAACTGTTTTTCAACGTTGAATTGTGAAGCGAAGAGAGATCGCATCAGTGTTGATTCTGTTCGGTTTTTCGTTTCTGCGCTCTCGCATTATTCCTTGTCCATGGCGGATCTCAAGTCAACCTTCCTCAAGGTCTACTCGGTTCTGAAAGAAGAGCTTCTCCAGGACCCTGCCTTCGAGTTTACTGACGCTTCTCGCCAATGGATCGAACGGGTACCATCTCTAATTCTTCTCCATTCGTTTCAGCTCTTCATGCTTTTCCCTTCCTCGTTCGCAAATGGATACATTCTCCATCTTGTTTCTCCGTCGATTTTGATATGTGAAAATCCGAAGGCTAAAGCTCTGAAGGGATTTGTTTATGTTAATGGGTATAGTTTGACCTTTGGATAG

Protein sequence

MPKSKHVIRNVRGTLFFVATRDFAVSIQLFPNYENALSIIKLIERLSCPNLKFRRRERERERVECPRKRTGGPNCFSTLNCEAKRDRISVDSVRFFVSALSHYSLSMADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERVPSLILLHSFQLFMLFPSSFANGYILHLVSPSILICENPKAKALKGFVYVNGYSLTFG
Homology
[Close]
BLAST of Sgr030171 vs. NCBI nr
Match: XP_008463060.1 (PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis melo] >TYK26960.1 farnesyl pyrophosphate synthase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-09
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MADLKSTFLKVYSVLK ELLQDPAFEFTDASRQW+ER+
Sbjct: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERM 38

[Close]
BLAST of Sgr030171 vs. NCBI nr
Match: XP_004138366.1 (farnesyl pyrophosphate synthase 1 isoform X1 [Cucumis sativus] >KGN45890.2 hypothetical protein Csa_004945 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-09
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MADLKSTFLKVYSVLK ELLQDPAFEFTDASRQW+ER+
Sbjct: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERM 38

[Close]
BLAST of Sgr030171 vs. NCBI nr
Match: KAA0039151.1 (farnesyl pyrophosphate synthase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-09
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MADLKSTFLKVYSVLK ELLQDPAFEFTDASRQW+ER+
Sbjct: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERM 38

[Close]
BLAST of Sgr030171 vs. NCBI nr
Match: AEM42979.1 (farnesyl diphosphate synthase [Siraitia grosvenorii])

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-09
Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MADLKSTFLKVYSVLKEE LQDPAFEFTDASRQWIER+
Sbjct: 1   MADLKSTFLKVYSVLKEEPLQDPAFEFTDASRQWIERM 38

[Close]
BLAST of Sgr030171 vs. NCBI nr
Match: XP_022142632.1 (farnesyl pyrophosphate synthase 1 [Momordica charantia])

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-09
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MADL+STFLKVYSVLKEELL DPAFEFTDASRQWIER+
Sbjct: 1   MADLRSTFLKVYSVLKEELLNDPAFEFTDASRQWIERM 38

[Close]
BLAST of Sgr030171 vs. ExPASy Swiss-Prot
Match: Q43315 (Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana OX=3702 GN=FPS2 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.0e-09
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MADLKSTFL VYSVLK +LLQDP+FEFT  SRQW+ER+
Sbjct: 1   MADLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERM 38

[Close]
BLAST of Sgr030171 vs. ExPASy Swiss-Prot
Match: Q4JHN6 (Farnesyl pyrophosphate synthase OS=Panax ginseng OX=4054 GN=FPS PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.8e-09
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           M+DLK+ FL+VYSVLK ELL DPAFEFTD SRQW+ER+
Sbjct: 1   MSDLKTRFLEVYSVLKSELLNDPAFEFTDDSRQWVERM 38

[Close]
BLAST of Sgr030171 vs. ExPASy Swiss-Prot
Match: P49351 (Farnesyl pyrophosphate synthase 1 OS=Lupinus albus OX=3870 GN=FPS1 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MADL+STFL VYSVLK ELL DPAFEF+  SRQW++R+
Sbjct: 1   MADLRSTFLNVYSVLKSELLHDPAFEFSPDSRQWLDRM 38

[Close]
BLAST of Sgr030171 vs. ExPASy Swiss-Prot
Match: P49352 (Farnesyl pyrophosphate synthase 2 OS=Lupinus albus OX=3870 GN=FPS2 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MAD KS+FL VYS+LK ELLQDPAFEF+  SRQW+ER+
Sbjct: 1   MADPKSSFLNVYSILKSELLQDPAFEFSTDSRQWVERM 38

[Close]
BLAST of Sgr030171 vs. ExPASy Swiss-Prot
Match: P49350 (Farnesyl pyrophosphate synthase OS=Artemisia annua OX=35608 GN=FPS1 PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 5.7e-08
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0 

Query: 105 LSMADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           +S  DLKS FLKVY  LK EL+ DPAFEF D SRQWIE++
Sbjct: 1   MSSIDLKSKFLKVYDTLKSELINDPAFEFDDDSRQWIEKM 40

[Close]
BLAST of Sgr030171 vs. ExPASy TrEMBL
Match: A0A5D3DUI0 (Farnesyl pyrophosphate synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00220 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 4.9e-10
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MADLKSTFLKVYSVLK ELLQDPAFEFTDASRQW+ER+
Sbjct: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERM 38

[Close]
BLAST of Sgr030171 vs. ExPASy TrEMBL
Match: A0A5A7TC04 (Farnesyl pyrophosphate synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00500 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 4.9e-10
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MADLKSTFLKVYSVLK ELLQDPAFEFTDASRQW+ER+
Sbjct: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERM 38

[Close]
BLAST of Sgr030171 vs. ExPASy TrEMBL
Match: A0A0A0K801 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017060 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 4.9e-10
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MADLKSTFLKVYSVLK ELLQDPAFEFTDASRQW+ER+
Sbjct: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERM 38

[Close]
BLAST of Sgr030171 vs. ExPASy TrEMBL
Match: A0A1S3CIB9 (farnesyl pyrophosphate synthase 1 OS=Cucumis melo OX=3656 GN=LOC103501295 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 4.9e-10
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MADLKSTFLKVYSVLK ELLQDPAFEFTDASRQW+ER+
Sbjct: 1   MADLKSTFLKVYSVLKSELLQDPAFEFTDASRQWVERM 38

[Close]
BLAST of Sgr030171 vs. ExPASy TrEMBL
Match: K7NBV9 (Farnesyl diphosphate synthase OS=Siraitia grosvenorii OX=190515 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 6.4e-10
Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MADLKSTFLKVYSVLKEE LQDPAFEFTDASRQWIER+
Sbjct: 1   MADLKSTFLKVYSVLKEEPLQDPAFEFTDASRQWIERM 38

[Close]
BLAST of Sgr030171 vs. TAIR 10
Match: AT4G17190.1 (farnesyl diphosphate synthase 2 )

HSP 1 Score: 65.1 bits (157), Expect = 7.4e-11
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 0 

Query: 107 MADLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           MADLKSTFL VYSVLK +LLQDP+FEFT  SRQW+ER+
Sbjct: 1   MADLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERM 38

[Close]
BLAST of Sgr030171 vs. TAIR 10
Match: AT5G47770.1 (farnesyl diphosphate synthase 1 )

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08
Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 109 DLKSTFLKVYSVLKEELLQDPAFEFTDASRQWIERV 145
           DLKSTFL VYSVLK +LL DP+FEFT+ SR W++R+
Sbjct: 45  DLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRM 80

The following BLAST results are available for this feature:
BLAST of Sgr030171 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463060.11.0e-0992.11PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis melo] >TYK26960.1 farnesyl... [more]
XP_004138366.11.0e-0992.11farnesyl pyrophosphate synthase 1 isoform X1 [Cucumis sativus] >KGN45890.2 hypot... [more]
KAA0039151.11.0e-0992.11farnesyl pyrophosphate synthase 1 [Cucumis melo var. makuwa][more]
AEM42979.11.3e-0994.74farnesyl diphosphate synthase [Siraitia grosvenorii][more]
XP_022142632.11.7e-0992.11farnesyl pyrophosphate synthase 1 [Momordica charantia][more]
BLAST of Sgr030171 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q433151.0e-0978.95Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana OX=3702 GN=FPS2 PE=2 S... [more]
Q4JHN61.8e-0976.32Farnesyl pyrophosphate synthase OS=Panax ginseng OX=4054 GN=FPS PE=2 SV=1[more]
P493511.2e-0873.68Farnesyl pyrophosphate synthase 1 OS=Lupinus albus OX=3870 GN=FPS1 PE=2 SV=1[more]
P493521.2e-0873.68Farnesyl pyrophosphate synthase 2 OS=Lupinus albus OX=3870 GN=FPS2 PE=2 SV=1[more]
P493505.7e-0867.50Farnesyl pyrophosphate synthase OS=Artemisia annua OX=35608 GN=FPS1 PE=1 SV=2[more]
BLAST of Sgr030171 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DUI04.9e-1092.11Farnesyl pyrophosphate synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TC044.9e-1092.11Farnesyl pyrophosphate synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A0A0K8014.9e-1092.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017060 PE=3 SV=1[more]
A0A1S3CIB94.9e-1092.11farnesyl pyrophosphate synthase 1 OS=Cucumis melo OX=3656 GN=LOC103501295 PE=3 S... [more]
K7NBV96.4e-1094.74Farnesyl diphosphate synthase OS=Siraitia grosvenorii OX=190515 PE=2 SV=1[more]
BLAST of Sgr030171 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G17190.17.4e-1178.95farnesyl diphosphate synthase 2 [more]
AT5G47770.11.6e-0869.44farnesyl diphosphate synthase 1 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr030171.1Sgr030171.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008299 isoprenoid biosynthetic process
molecular_function GO:0004337 geranyltranstransferase activity