Homology
BLAST of Sgr029824 vs. NCBI nr
Match:
XP_022153360.1 (pentatricopeptide repeat-containing protein At2g18940, chloroplastic [Momordica charantia])
HSP 1 Score: 1610.9 bits (4170), Expect = 0.0e+00
Identity = 789/842 (93.71%), Postives = 810/842 (96.20%), Query Frame = 0
Query: 66 MEGALFPNRCPLPVSRPIQPTQTLKFNSTTLPPPPPSPPSSSFPIDTLLQHLLQLSLPPT 125
MEGALFPNRCPLPVSRP QP QTLKFNSTTLPPPPPS PSSSFPIDTLLQHLLQLSLPP+
Sbjct: 1 MEGALFPNRCPLPVSRPNQPIQTLKFNSTTLPPPPPSSPSSSFPIDTLLQHLLQLSLPPS 60
Query: 126 DTVHKLKPVNVPRKNVAPLPSLQISVNSTKKQREGPQFKKPVLNSAPQFEYNDEEIRDGP 185
D+ HKLKPVNV + NVA LPSLQISV+ST+KQREGPQ KKP LNSA QFEYNDEEIRDGP
Sbjct: 61 DSAHKLKPVNVAQNNVARLPSLQISVDSTRKQREGPQLKKPGLNSATQFEYNDEEIRDGP 120
Query: 186 LQFLSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLEVDLVSLLKALDLSGNSERAILLFE 245
L FLSK+GMCLLNS+TEQP D LN+FF SVKFELLEVDLVSLLKALDLSGNSERAILL E
Sbjct: 121 LHFLSKKGMCLLNSITEQPLDSLNSFFYSVKFELLEVDLVSLLKALDLSGNSERAILLIE 180
Query: 246 WVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILHAY 305
WVVSNSG N+K DNKAVELMIRILGRESKYS ALKLFDEIPIDKYSLDVRACTTILHAY
Sbjct: 181 WVVSNSGFENVKLDNKAVELMIRILGRESKYSTALKLFDEIPIDKYSLDVRACTTILHAY 240
Query: 306 SRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEFD 365
SRNGKYKQAIAMFERMK+CGL PSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEFD
Sbjct: 241 SRNGKYKQAIAMFERMKECGLSPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEFD 300
Query: 366 EFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNILK 425
EFTCSTVISACGREGL NEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNILK
Sbjct: 301 EFTCSTVISACGREGLXNEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNILK 360
Query: 426 EMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRAG 485
EM+DNNC PDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGV+PNAVTYTTVINAYGRAG
Sbjct: 361 EMKDNNCTPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVMPNAVTYTTVINAYGRAG 420
Query: 486 KEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITWN 545
KE KALQLFNQMKKSGCVPNVCTYNSILALLGKKSR EEMIKILSDMR NGCSPNRITWN
Sbjct: 421 KEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRPEEMIKILSDMRINGCSPNRITWN 480
Query: 546 TMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIKA 605
TMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIKA
Sbjct: 481 TMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIKA 540
Query: 606 GFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGL 665
GFTPCVTTYNALLNALARRGDWK AESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGL
Sbjct: 541 GFTPCVTTYNALLNALARRGDWKGAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGL 600
Query: 666 ERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLSI 725
ERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEEL+KNGYKPDLVIFNSMLSI
Sbjct: 601 ERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDLVIFNSMLSI 660
Query: 726 FAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGEKPD 785
FAKNNMYERAHEMLHLIREGGLQPDLVTYN+LMNMYARRGECWKAEEIL GLIKSGEKPD
Sbjct: 661 FAKNNMYERAHEMLHLIREGGLQPDLVTYNNLMNMYARRGECWKAEEILNGLIKSGEKPD 720
Query: 786 LVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEVIS 845
LVSYNTI+KGFC+QGLMQEAIRI+S MT IRPCIFTYNTFVSGYAGRGMFAEVDEVIS
Sbjct: 721 LVSYNTIIKGFCKQGLMQEAIRIMSAMTAREIRPCIFTYNTFVSGYAGRGMFAEVDEVIS 780
Query: 846 YMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNIDHSFDYHSTQRLASHVREMM 905
YMIQNNCRPNELTYKIVVDGYCKARK++EAMDFVFGIKNIDH FDYHSTQRLASH+REMM
Sbjct: 781 YMIQNNCRPNELTYKIVVDGYCKARKYQEAMDFVFGIKNIDHLFDYHSTQRLASHIREMM 840
Query: 906 NS 908
+S
Sbjct: 841 SS 842
BLAST of Sgr029824 vs. NCBI nr
Match:
XP_038890555.1 (pentatricopeptide repeat-containing protein At2g18940, chloroplastic [Benincasa hispida])
HSP 1 Score: 1585.1 bits (4103), Expect = 0.0e+00
Identity = 779/843 (92.41%), Postives = 808/843 (95.85%), Query Frame = 0
Query: 66 MEGALFPNRCPLPVSRPIQPTQTLKFNSTTL-PPPPPSPPSSSFPIDTLLQHLLQLSLPP 125
MEGALFPNRCPLPVSRPIQP QTLKFNSTT PPPPPSPPSSSFPIDTLLQHLLQLSL P
Sbjct: 1 MEGALFPNRCPLPVSRPIQPNQTLKFNSTTFPPPPPPSPPSSSFPIDTLLQHLLQLSLSP 60
Query: 126 TDTVHKLKPVNVPRKNVAPLPSLQISVNSTKKQREGPQFKKPVLNSAPQFEYNDEEIRDG 185
DT HKLKPVNV +KNVA PSLQISV+STK +REG Q KKP+LNSAPQFE N EEIRDG
Sbjct: 61 NDTAHKLKPVNVAQKNVAHFPSLQISVDSTKTRREGAQLKKPILNSAPQFENNVEEIRDG 120
Query: 186 PLQFLSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLEVDLVSLLKALDLSGNSERAILLF 245
PLQFLSK+ M LLNS+ EQPFD LNAFFDSVKFELLEVDLVSLLKALD+SG+SERAILLF
Sbjct: 121 PLQFLSKKSMSLLNSIAEQPFDSLNAFFDSVKFELLEVDLVSLLKALDVSGSSERAILLF 180
Query: 246 EWVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILHA 305
EWVVSNS SG++K D+KAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILHA
Sbjct: 181 EWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILHA 240
Query: 306 YSRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEF 365
YSR+GKYKQAIAMFERMKD GL PSLVTYNVMLDVYGKMGRSWDKILGLLD+M+SEGL+F
Sbjct: 241 YSRSGKYKQAIAMFERMKDNGLSPSLVTYNVMLDVYGKMGRSWDKILGLLDQMKSEGLQF 300
Query: 366 DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 425
DEFTCSTVISACGREGLINEAKEFFV LKS+GYEPGTVTYNALLQVFGKAGIYSEALNIL
Sbjct: 301 DEFTCSTVISACGREGLINEAKEFFVELKSNGYEPGTVTYNALLQVFGKAGIYSEALNIL 360
Query: 426 KEMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRA 485
KEMEDNNC PDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGV+PNAVTYTTVINAYGRA
Sbjct: 361 KEMEDNNCIPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVMPNAVTYTTVINAYGRA 420
Query: 486 GKEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITW 545
GKE KALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMR NGC PNRITW
Sbjct: 421 GKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITW 480
Query: 546 NTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIK 605
NTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSE+DAAKMYDEMIK
Sbjct: 481 NTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSELDAAKMYDEMIK 540
Query: 606 AGFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG 665
AGFTPC TTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG
Sbjct: 541 AGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG 600
Query: 666 LERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLS 725
LERIEKDIYDG IFPSWVLLRTLILANFKCRAVRGMERAFEEL+KNGYKPD+VIFNSMLS
Sbjct: 601 LERIEKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELLKNGYKPDMVIFNSMLS 660
Query: 726 IFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGEKP 785
IFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEIL+GLIKSGE P
Sbjct: 661 IFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILRGLIKSGENP 720
Query: 786 DLVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEVI 845
DLVSYNTI+KGFCRQGLMQEAIRI+SEMT GIRPCIFTYNTFVSGYAGR MFAEVDEVI
Sbjct: 721 DLVSYNTIIKGFCRQGLMQEAIRIMSEMTARGIRPCIFTYNTFVSGYAGRRMFAEVDEVI 780
Query: 846 SYMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNIDHSFDYHSTQRLASHVREM 905
SYMIQNNC+PNELTYKI+VDGYCKARK++EAMDFVFGIKNID SFD HSTQRLASHVR++
Sbjct: 781 SYMIQNNCKPNELTYKIIVDGYCKARKYQEAMDFVFGIKNIDDSFDNHSTQRLASHVRDL 840
Query: 906 MNS 908
MNS
Sbjct: 841 MNS 843
BLAST of Sgr029824 vs. NCBI nr
Match:
XP_008451598.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g18940, chloroplastic [Cucumis melo] >KAA0055551.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1572.4 bits (4070), Expect = 0.0e+00
Identity = 768/843 (91.10%), Postives = 808/843 (95.85%), Query Frame = 0
Query: 66 MEGALFPNRCPLPVSRPIQPTQTLKFNSTTL-PPPPPSPPSSSFPIDTLLQHLLQLSLPP 125
MEG+ FPNRC LPVSRPIQP QTLKFNSTTL PPPPPSPPSSS PIDTLLQHLL LSL P
Sbjct: 1 MEGSFFPNRCTLPVSRPIQPNQTLKFNSTTLPPPPPPSPPSSSIPIDTLLQHLLHLSLSP 60
Query: 126 TDTVHKLKPVNVPRKNVAPLPSLQISVNSTKKQREGPQFKKPVLNSAPQFEYNDEEIRDG 185
D+ HKLKPVNV +KNVA LPSLQISV+STKK+R+G Q KKPVLNSAPQFEY+DEEIRDG
Sbjct: 61 NDSAHKLKPVNVAKKNVAHLPSLQISVDSTKKRRDGAQLKKPVLNSAPQFEYSDEEIRDG 120
Query: 186 PLQFLSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLEVDLVSLLKALDLSGNSERAILLF 245
PLQFLSK+G+CLLNS+ QPFD L++ FDSVK ELLEVD+VSLLKALD+SGNSERAILLF
Sbjct: 121 PLQFLSKKGICLLNSIAAQPFDSLDSLFDSVKSELLEVDIVSLLKALDVSGNSERAILLF 180
Query: 246 EWVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILHA 305
EWVVSN+ SG++K D+KAVELMIRILGRESKYSIAL+LFD+IPIDKYSLDVRACTTILHA
Sbjct: 181 EWVVSNTVSGDVKLDSKAVELMIRILGRESKYSIALELFDKIPIDKYSLDVRACTTILHA 240
Query: 306 YSRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEF 365
YSRNGKYKQAIAMFERMK+CGL PSLVTYNVMLDVYGKMGRSWDKIL LLDEMR+EGL+F
Sbjct: 241 YSRNGKYKQAIAMFERMKECGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQF 300
Query: 366 DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 425
DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL
Sbjct: 301 DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 360
Query: 426 KEMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRA 485
KEMEDNNC PDSVTYNELVAAYVRAGFYEEGAAVIDTMT KGV+PNAVTYTTVINAYGRA
Sbjct: 361 KEMEDNNCTPDSVTYNELVAAYVRAGFYEEGAAVIDTMTRKGVMPNAVTYTTVINAYGRA 420
Query: 486 GKEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITW 545
GKE KALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMR NGC PNRITW
Sbjct: 421 GKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITW 480
Query: 546 NTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIK 605
NT+LAMCGDKGKHKFVNHVFREMKNCGFEPG+DTFNTLISAYGRCGSE+DAAKMY+EM+K
Sbjct: 481 NTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYEEMMK 540
Query: 606 AGFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG 665
AGFTPC TTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG
Sbjct: 541 AGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG 600
Query: 666 LERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLS 725
LERIEKDIYDG IFPSWVLLRTLILANFKCRAVRGMERAFEEL+KNGYKPD+VIFNSMLS
Sbjct: 601 LERIEKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLS 660
Query: 726 IFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGEKP 785
IFAKNNMYERAHEMLHLIRE GLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGE P
Sbjct: 661 IFAKNNMYERAHEMLHLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGENP 720
Query: 786 DLVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEVI 845
DLVSYNTI+KGFCRQGLMQEAIRI+SEMTT GIRPCIFTYNTFVSGYAGR MFAEVDEVI
Sbjct: 721 DLVSYNTIIKGFCRQGLMQEAIRIMSEMTTRGIRPCIFTYNTFVSGYAGRRMFAEVDEVI 780
Query: 846 SYMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNIDHSFDYHSTQRLASHVREM 905
SYMIQNNC+PNELTYKI+VDGYCKARK+++AMDFVFGIKNID SFD HSTQRLASHVR+M
Sbjct: 781 SYMIQNNCKPNELTYKIIVDGYCKARKYQDAMDFVFGIKNIDDSFDNHSTQRLASHVRDM 840
Query: 906 MNS 908
MN+
Sbjct: 841 MNT 843
BLAST of Sgr029824 vs. NCBI nr
Match:
TYK01375.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1567.0 bits (4056), Expect = 0.0e+00
Identity = 766/843 (90.87%), Postives = 806/843 (95.61%), Query Frame = 0
Query: 66 MEGALFPNRCPLPVSRPIQPTQTLKFNSTTL-PPPPPSPPSSSFPIDTLLQHLLQLSLPP 125
MEG+ FPNRC LPVSRPIQP QTLKFNSTTL PPPPPSPPSSS PIDTLLQHLL LSL P
Sbjct: 1 MEGSFFPNRCTLPVSRPIQPNQTLKFNSTTLPPPPPPSPPSSSIPIDTLLQHLLHLSLSP 60
Query: 126 TDTVHKLKPVNVPRKNVAPLPSLQISVNSTKKQREGPQFKKPVLNSAPQFEYNDEEIRDG 185
D+ HKLKPVNV +KNVA LPSLQISV+STKK+R+G KKPVLNSAPQFEY+DEEIRDG
Sbjct: 61 NDSAHKLKPVNVAKKNVAHLPSLQISVDSTKKRRDGAPLKKPVLNSAPQFEYSDEEIRDG 120
Query: 186 PLQFLSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLEVDLVSLLKALDLSGNSERAILLF 245
PLQFLSK+G+CLLNS+ QPFD L++ FDSVK ELLEVD+VSLLKALD+SGNSERAILLF
Sbjct: 121 PLQFLSKKGICLLNSIAAQPFDSLDSLFDSVKSELLEVDIVSLLKALDVSGNSERAILLF 180
Query: 246 EWVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILHA 305
EWVVSN+ SG++K D+KAVELMIRILGRESKYSIAL+LFD+IPIDKYSLDVRACTTILHA
Sbjct: 181 EWVVSNTVSGDVKLDSKAVELMIRILGRESKYSIALELFDKIPIDKYSLDVRACTTILHA 240
Query: 306 YSRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEF 365
YSRNGKYKQAIAMFERMK+CGL PSLVTYNVMLDVYGKMGRSWDKIL LLDEMR+EGL+F
Sbjct: 241 YSRNGKYKQAIAMFERMKECGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQF 300
Query: 366 DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 425
DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL
Sbjct: 301 DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 360
Query: 426 KEMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRA 485
KEMEDNNC PDSVTYNELVAAYVRAGFYEEGAAVIDTMT KGV+PNAVTYTTVINAYGRA
Sbjct: 361 KEMEDNNCTPDSVTYNELVAAYVRAGFYEEGAAVIDTMTRKGVMPNAVTYTTVINAYGRA 420
Query: 486 GKEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITW 545
GKE KALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMR NGC PNRITW
Sbjct: 421 GKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITW 480
Query: 546 NTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIK 605
NT+LAMCGDKGKHKFVNHVFREMKNCGFEPG+DTFNTLISAYGRCGSE+DAAKMY+EM+K
Sbjct: 481 NTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYEEMMK 540
Query: 606 AGFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG 665
AGFTPC TTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG
Sbjct: 541 AGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG 600
Query: 666 LERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLS 725
LERIEKDIY G IFPSWVLLRTLILANFKCRAVRGMERAFEEL+KNGYKPD+VIFNSMLS
Sbjct: 601 LERIEKDIYAGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLS 660
Query: 726 IFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGEKP 785
IFAKNNMYERAHEMLHLIRE GLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGE P
Sbjct: 661 IFAKNNMYERAHEMLHLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGENP 720
Query: 786 DLVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEVI 845
DLVSYNTI+KGFCRQGLMQEAIRI+SEMTT GIRPCIFTYNTFVSGYAGR MFAEVDEVI
Sbjct: 721 DLVSYNTIIKGFCRQGLMQEAIRIMSEMTTRGIRPCIFTYNTFVSGYAGRRMFAEVDEVI 780
Query: 846 SYMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNIDHSFDYHSTQRLASHVREM 905
SYMIQNNC+PNELTYKI+VDGYCKARK+++AMDFVFGIKNID SFD HSTQRLASHVR+M
Sbjct: 781 SYMIQNNCKPNELTYKIIVDGYCKARKYQDAMDFVFGIKNIDDSFDNHSTQRLASHVRDM 840
Query: 906 MNS 908
MN+
Sbjct: 841 MNT 843
BLAST of Sgr029824 vs. NCBI nr
Match:
XP_004148341.1 (pentatricopeptide repeat-containing protein At2g18940, chloroplastic [Cucumis sativus] >KGN61151.1 hypothetical protein Csa_021138 [Cucumis sativus])
HSP 1 Score: 1549.6 bits (4011), Expect = 0.0e+00
Identity = 760/844 (90.05%), Postives = 799/844 (94.67%), Query Frame = 0
Query: 66 MEGALFPNRCPLPVSRPIQPTQTLKFNSTTLPP--PPPSPPSSSFPIDTLLQHLLQLSLP 125
MEGALFPNRCPLPVSRPIQP QTLKFNSTTLPP PPPSPPSSS PIDTLLQHLL LSL
Sbjct: 1 MEGALFPNRCPLPVSRPIQPNQTLKFNSTTLPPPLPPPSPPSSSIPIDTLLQHLLHLSLS 60
Query: 126 PTDTVHKLKPVNVPRKNVAPLPSLQISVNSTKKQREGPQFKKPVLNSAPQFEYNDEEIRD 185
P D+ HKLKPVNV +KNVA LPSLQIS++STKK+R+G Q KK VLNSAPQFEY+D+EIRD
Sbjct: 61 PNDSAHKLKPVNVAKKNVAHLPSLQISMDSTKKRRDGAQLKKLVLNSAPQFEYSDKEIRD 120
Query: 186 GPLQFLSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLEVDLVSLLKALDLSGNSERAILL 245
GPLQFLSK+G+CLLNS+ +PFD LNA FDSVK ELLEVD+VSLLKALD+ G SERAILL
Sbjct: 121 GPLQFLSKKGICLLNSIAAEPFDSLNALFDSVKSELLEVDIVSLLKALDVLGKSERAILL 180
Query: 246 FEWVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILH 305
FEWVVSNS SG++K D+KAVELMIRILGRESKYSIALKL D+IPIDKYSLDVRACTTILH
Sbjct: 181 FEWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILH 240
Query: 306 AYSRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLE 365
AYSRNGKYKQAIAMFERMKDCGL PSLVTYNVMLDVYGKMGRSWDKIL LLDEMR+EGL+
Sbjct: 241 AYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQ 300
Query: 366 FDEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNI 425
FDEFTCSTVISACGREGLINEAKEFFV LKSSGYEPGTVTYNALLQVFGKAGIYSEALNI
Sbjct: 301 FDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNI 360
Query: 426 LKEMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGR 485
LKEMEDNNC DSVTYNELVAAYVRAGFYEEGA VIDTMT KGV+PNAVTYTTVINAYGR
Sbjct: 361 LKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGR 420
Query: 486 AGKEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRIT 545
AGKE KALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMR NGC PNRIT
Sbjct: 421 AGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRIT 480
Query: 546 WNTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMI 605
WNT+LAMCGDKGKHKFVNHVFREMKNCGFEPG+DTFNTLISAYGRCGSE+DAAKMYDEM+
Sbjct: 481 WNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMM 540
Query: 606 KAGFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVR 665
KAGFTPC TTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVR
Sbjct: 541 KAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVR 600
Query: 666 GLERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSML 725
GLERI KDIYDG IFPSWVLLRTLILANFKCRAVRGMERAFEEL+KNGYKPD+VIFNSML
Sbjct: 601 GLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSML 660
Query: 726 SIFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGEK 785
SIFAKNNMYERA +ML LIRE GLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGE
Sbjct: 661 SIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGES 720
Query: 786 PDLVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEV 845
PDLVSYNTI+KGFCRQGLMQEAIR++SEMTT GI PCIFTYNTFVSGYAGRGMFAEVDEV
Sbjct: 721 PDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEV 780
Query: 846 ISYMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNIDHSFDYHSTQRLASHVRE 905
ISYMIQ NC+PNELTYKI+VDGYCKARK+++AMDF+FGIKNID SFD HSTQRLASHVR+
Sbjct: 781 ISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFIFGIKNIDDSFDNHSTQRLASHVRD 840
Query: 906 MMNS 908
MMN+
Sbjct: 841 MMNT 844
BLAST of Sgr029824 vs. ExPASy Swiss-Prot
Match:
O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)
HSP 1 Score: 1136.7 bits (2939), Expect = 0.0e+00
Identity = 564/850 (66.35%), Postives = 678/850 (79.76%), Query Frame = 0
Query: 66 MEGALFPNRCPLPVSRPIQP-----TQTLKFNSTTLPPPPPSPPSSSFPIDTLLQHLLQL 125
M+GALFP++ P P+ P Q++KF+S TL PPPSPP SFP+D+LL HL+ L
Sbjct: 1 MDGALFPHKPPYPIQSKRPPPSQSSNQSIKFSSATLHLPPPSPP--SFPLDSLLHHLVHL 60
Query: 126 SLPPTDTVHKLKPVNVPRKN---VAPLPSLQISVNSTKKQREGPQFKKPVLNSAPQFEYN 185
S PP PR + A PSL++S +S+ KP+L E
Sbjct: 61 SSPP------------PRHSNSAAARFPSLEVSTDSSS--------SKPILG----IEIE 120
Query: 186 DEEIRDGPLQFLSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLEVDLVSLLKALDLSGNS 245
+E R+G L+ L K+ + L+NS+ EQP GL+ FFDSVK ELL DLVSL+K LD SG+
Sbjct: 121 NE--RNGSLKLLCKKEVVLVNSIVEQPLTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHW 180
Query: 246 ERAILLFEWVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRA 305
ERA+ LFEW+V +S SG LK D++ +E+ +RILGRES+YS+A KL D+IP+ +Y LDVRA
Sbjct: 181 ERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRA 240
Query: 306 CTTILHAYSRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEM 365
TTILHAYSR GKY++AI +FERMK+ G P+LVTYNV+LDV+GKMGRSW KILG+LDEM
Sbjct: 241 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 300
Query: 366 RSEGLEFDEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIY 425
RS+GL+FDEFTCSTV+SAC REGL+ EAKEFF LKS GYEPGTVTYNALLQVFGKAG+Y
Sbjct: 301 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 360
Query: 426 SEALNILKEMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTV 485
+EAL++LKEME+N+C DSVTYNELVAAYVRAGF +E A VI+ MT KGV+PNA+TYTTV
Sbjct: 361 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV 420
Query: 486 INAYGRAGKEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGC 545
I+AYG+AGKE +AL+LF MK++GCVPN CTYN++L+LLGKKSRS EMIK+L DM++NGC
Sbjct: 421 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 480
Query: 546 SPNRITWNTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAK 605
SPNR TWNTMLA+CG+KG KFVN VFREMK+CGFEP RDTFNTLISAYGRCGSE+DA+K
Sbjct: 481 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 540
Query: 606 MYDEMIKAGFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYA 665
MY EM +AGF CVTTYNALLNALAR+GDW++ E+V+ DM++KGFKP ETS+SLML CYA
Sbjct: 541 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 600
Query: 666 KGGNVRGLERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLV 725
KGGN G+ERIE I +G IFPSW+LLRTL+LANFKCRA+ G ERAF K+GYKPD+V
Sbjct: 601 KGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMV 660
Query: 726 IFNSMLSIFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGL 785
IFNSMLSIF +NNMY++A +L IRE GL PDLVTYNSLM+MY RRGECWKAEEILK L
Sbjct: 661 IFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 720
Query: 786 IKSGEKPDLVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMF 845
KS KPDLVSYNT++KGFCR+GLMQEA+R+LSEMT GIRPCIFTYNTFVSGY GMF
Sbjct: 721 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMF 780
Query: 846 AEVDEVISYMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNIDHSFDYHSTQRL 905
AE+++VI M +N+CRPNELT+K+VVDGYC+A K+ EAMDFV IK D FD S QRL
Sbjct: 781 AEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRL 822
Query: 906 ASHVREMMNS 908
A VRE + S
Sbjct: 841 ALRVRENLES 822
BLAST of Sgr029824 vs. ExPASy Swiss-Prot
Match:
B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)
HSP 1 Score: 822.4 bits (2123), Expect = 5.1e-237
Identity = 421/824 (51.09%), Postives = 541/824 (65.66%), Query Frame = 0
Query: 70 LFPNRCPLPVSRPIQPTQTLKFNSTTLPPPPPSPPSSSFPIDTLLQHLLQLSLPPTDTVH 129
LFPN+ LP + LP PP P SS P+D+LL HL
Sbjct: 8 LFPNKPTLPAGP--------RKRGPLLPAAPPPPSPSSLPLDSLLLHL------------ 67
Query: 130 KLKPVNVPRKNVAPLPSLQISVNSTKKQREGPQFKKPVLNSAPQFEYNDEEIRDGPLQFL 189
P AP P R Q P P FL
Sbjct: 68 -----TAPAPAPAPAP------------RRSHQTPTP------------------PHSFL 127
Query: 190 SKRGMCLLNSVTEQPFDGLNAFFDSVKFELLEVDLVSLLKALDLSGNSERAILLFEWVVS 249
S L+ +++ P L AF S + ELL D+ SLLKAL+LSG+ E A+ L W
Sbjct: 128 SPDAQVLVLAISSHPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGK 187
Query: 250 NSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYS-LDVRACTTILHAYSRN 309
+ D A+E+++R LGRE ++ L DE P+ S LDVRA TT+LHA SR
Sbjct: 188 EGAA-----DASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRA 247
Query: 310 GKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEFDEFT 369
G+Y++A+ +F ++ G+ P+LVTYNV+LDVYG+MGRSW +I+ LLDEMR+ G+E D FT
Sbjct: 248 GRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFT 307
Query: 370 CSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEME 429
STVI+AC R+GL++EA FF LK+ G+ P VTYNALLQVFGKAG Y+EAL +L EME
Sbjct: 308 ASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEME 367
Query: 430 DNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRAGKEA 489
N C PD+VTYNEL Y RAGF+EE A +DTM KG+LPNA TY TV+ AYG GK
Sbjct: 368 QNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVD 427
Query: 490 KALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITWNTML 549
+AL LF+QMKK+G VPNV TYN +L +LGKKSR M+++L +M +GC+PNR+TWNTML
Sbjct: 428 EALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTML 487
Query: 550 AMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIKAGFT 609
A+CG +G +V V M++CG E RDT+NTLI+AYGRCGS +A KMY+EM AGFT
Sbjct: 488 AVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFT 547
Query: 610 PCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERI 669
PC+TTYNALLN L+R+GDW A+S++ MR KGFKPNE S+SL+L CYAKGGNV G+ I
Sbjct: 548 PCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAI 607
Query: 670 EKDIY-DGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLSIFA 729
E ++Y G +FPSWV+LRTL++ANFKCR + GME AF+E+ GY PDLVIFNSMLSI+A
Sbjct: 608 ENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYA 667
Query: 730 KNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGL-IKSGEKPDL 789
KN MY +A E+ I+ GL PDL+TYNSLM+MYA+ E W+AE+IL L KPD+
Sbjct: 668 KNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDV 727
Query: 790 VSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEVISY 849
VSYNT++ GFC+QGL++EA R+LSEM G+ PC TY+T V GY+ MF+E EVI Y
Sbjct: 728 VSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGY 771
Query: 850 MIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNIDHSFD 891
M+Q+ +P ELTY+ VV+ YC+A++F+EA F+ + D FD
Sbjct: 788 MVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 771
BLAST of Sgr029824 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 591.3 bits (1523), Expect = 1.9e-167
Identity = 290/708 (40.96%), Postives = 444/708 (62.71%), Query Frame = 0
Query: 189 LSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLE----------VDLVSLLKALDLSGNSE 248
LS +G +L S+ E FD + DSV EL E +L++ LK L +
Sbjct: 95 LSPQGQQVLRSLIEPNFD--SGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFD 154
Query: 249 RAILLFEWVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRAC 308
A+ F+W + ++ DN V ++I +LG+E + S A +F+ + D +SLDV +
Sbjct: 155 LALRAFDWFMKQKDYQSML-DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSY 214
Query: 309 TTILHAYSRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMR 368
T+++ A++ +G+Y++A+ +F++M++ G P+L+TYNV+L+V+GKMG W+KI L+++M+
Sbjct: 215 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 274
Query: 369 SEGLEFDEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYS 428
S+G+ D +T +T+I+ C R L EA + F +K++G+ VTYNALL V+GK+
Sbjct: 275 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 334
Query: 429 EALNILKEMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVI 488
EA+ +L EM N +P VTYN L++AY R G +E + + M KG P+ TYTT++
Sbjct: 335 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 394
Query: 489 NAYGRAGKEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCS 548
+ + RAGK A+ +F +M+ +GC PN+CT+N+ + + G + + EM+KI ++ G S
Sbjct: 395 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 454
Query: 549 PNRITWNTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKM 608
P+ +TWNT+LA+ G G V+ VF+EMK GF P R+TFNTLISAY RCGS A +
Sbjct: 455 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 514
Query: 609 YDEMIKAGFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAK 668
Y M+ AG TP ++TYN +L ALAR G W+ +E VL +M + KPNE ++ +LH YA
Sbjct: 515 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 574
Query: 669 GGNVRGLERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVI 728
G + + + +++Y G I P VLL+TL+L KC + ERAF EL + G+ PD+
Sbjct: 575 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 634
Query: 729 FNSMLSIFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLI 788
NSM+SI+ + M +A+ +L ++E G P + TYNSLM M++R + K+EEIL+ ++
Sbjct: 635 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 694
Query: 789 KSGEKPDLVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFA 848
G KPD++SYNT++ +CR M++A RI SEM GI P + TYNTF+ YA MF
Sbjct: 695 AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFE 754
Query: 849 EVDEVISYMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNID 887
E V+ YMI++ CRPN+ TY +VDGYCK + EA FV ++N+D
Sbjct: 755 EAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLD 799
BLAST of Sgr029824 vs. ExPASy Swiss-Prot
Match:
Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)
HSP 1 Score: 292.4 bits (747), Expect = 1.8e-77
Identity = 171/635 (26.93%), Postives = 305/635 (48.03%), Query Frame = 0
Query: 196 LLNSVTEQPFDG-LNAFFDSVKFELLEVDLVSLLKALDLSGNSERAILLFEWVVSNSGSG 255
L+N ++ P G + D K +L D + K G+ +R++ LF+++
Sbjct: 79 LINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIW-- 138
Query: 256 NLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILHAYSRNGKYKQA 315
KP+ +MI +LGRE L++FDE+P S V + T +++AY RNG+Y+ +
Sbjct: 139 -CKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETS 198
Query: 316 IAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEFDEFTCSTVIS 375
+ + +RMK+ + PS++TYN +++ + G W+ +LGL EMR EG++ D T +T++S
Sbjct: 199 LELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLS 258
Query: 376 ACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCAP 435
AC GL +EA+ F + G P TY+ L++ FGK + ++L EM P
Sbjct: 259 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 318
Query: 436 DSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRAGKEAKALQLF 495
D +YN L+ AY ++G +E V M G PNA TY+ ++N +G++G+ QLF
Sbjct: 319 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 378
Query: 496 NQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITWNTMLAMCGDK 555
+MK S P+ TYN ++ + G+ +E++ + DM P+ T+ ++ CG
Sbjct: 379 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 438
Query: 556 GKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIKAGFTPCVTTY 615
G H+ + + M P + +I A+G+ +A ++ M + G P + T+
Sbjct: 439 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 498
Query: 616 NALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIEKDIYD 675
++LL + AR G K +E++L + + G N +F+ + Y +GG + D+
Sbjct: 499 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 558
Query: 676 GHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLSIFAKNNMYER 735
P L ++ R V FEE+ + P ++ + ML+++ K ++
Sbjct: 559 SRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDD 618
Query: 736 AHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWK-AEEILKGLIKSGEKPDLVSYNTIM 795
+E+L + + ++ W+ E +L L G + YN ++
Sbjct: 619 VNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALL 678
Query: 796 KGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFV 829
G + A R+L+E T G+ P +F N V
Sbjct: 679 DALWWLGQKERAARVLNEATKRGLFPELFRKNKLV 710
BLAST of Sgr029824 vs. ExPASy Swiss-Prot
Match:
Q9CAN5 (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63080 PE=2 SV=1)
HSP 1 Score: 254.2 bits (648), Expect = 5.5e-66
Identity = 145/555 (26.13%), Postives = 273/555 (49.19%), Query Frame = 0
Query: 310 KYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEFDEFTC 369
K +A+ +F M PS+V ++ +L KM + +D ++ ++M G+ + +T
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM-KKFDLVISFGEKMEILGVSHNLYTY 104
Query: 370 STVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMED 429
+ +I+ R ++ A + GY P VT N+LL F SEA+ ++ +M +
Sbjct: 105 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 164
Query: 430 NNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRAGKEAK 489
PD+VT+ LV + E A+++ M KG P+ VTY VIN + G+
Sbjct: 165 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 224
Query: 490 ALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITWNTMLA 549
AL L N+M+K +V Y++++ L K ++ + + ++M G P+ T++++++
Sbjct: 225 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 284
Query: 550 MCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIKAGFTP 609
+ G+ + + +M P TFN+LI A+ + G I+A K++DEMI+ P
Sbjct: 285 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 344
Query: 610 CVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIE 669
+ TYN+L+N A+ + M +K P+ +++ +++ + K V +
Sbjct: 345 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 404
Query: 670 KDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLSIFAKN 729
+D+ + + V TLI F+ + F+++V +G P+++ +N++L KN
Sbjct: 405 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 464
Query: 730 NMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGEKPDLVSY 789
E+A + +++ ++PD+ TYN + + G+ ++ L G KPD+++Y
Sbjct: 465 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 524
Query: 790 NTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQ 849
NT++ GFC++GL +EA + +M G P TYNT + + G A E+I M
Sbjct: 525 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 584
Query: 850 NNCRPNELTYKIVVD 865
+ TY +V D
Sbjct: 585 CRFAGDASTYGLVTD 598
BLAST of Sgr029824 vs. ExPASy TrEMBL
Match:
A0A6J1DGL5 (pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111020876 PE=4 SV=1)
HSP 1 Score: 1610.9 bits (4170), Expect = 0.0e+00
Identity = 789/842 (93.71%), Postives = 810/842 (96.20%), Query Frame = 0
Query: 66 MEGALFPNRCPLPVSRPIQPTQTLKFNSTTLPPPPPSPPSSSFPIDTLLQHLLQLSLPPT 125
MEGALFPNRCPLPVSRP QP QTLKFNSTTLPPPPPS PSSSFPIDTLLQHLLQLSLPP+
Sbjct: 1 MEGALFPNRCPLPVSRPNQPIQTLKFNSTTLPPPPPSSPSSSFPIDTLLQHLLQLSLPPS 60
Query: 126 DTVHKLKPVNVPRKNVAPLPSLQISVNSTKKQREGPQFKKPVLNSAPQFEYNDEEIRDGP 185
D+ HKLKPVNV + NVA LPSLQISV+ST+KQREGPQ KKP LNSA QFEYNDEEIRDGP
Sbjct: 61 DSAHKLKPVNVAQNNVARLPSLQISVDSTRKQREGPQLKKPGLNSATQFEYNDEEIRDGP 120
Query: 186 LQFLSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLEVDLVSLLKALDLSGNSERAILLFE 245
L FLSK+GMCLLNS+TEQP D LN+FF SVKFELLEVDLVSLLKALDLSGNSERAILL E
Sbjct: 121 LHFLSKKGMCLLNSITEQPLDSLNSFFYSVKFELLEVDLVSLLKALDLSGNSERAILLIE 180
Query: 246 WVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILHAY 305
WVVSNSG N+K DNKAVELMIRILGRESKYS ALKLFDEIPIDKYSLDVRACTTILHAY
Sbjct: 181 WVVSNSGFENVKLDNKAVELMIRILGRESKYSTALKLFDEIPIDKYSLDVRACTTILHAY 240
Query: 306 SRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEFD 365
SRNGKYKQAIAMFERMK+CGL PSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEFD
Sbjct: 241 SRNGKYKQAIAMFERMKECGLSPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEFD 300
Query: 366 EFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNILK 425
EFTCSTVISACGREGL NEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNILK
Sbjct: 301 EFTCSTVISACGREGLXNEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNILK 360
Query: 426 EMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRAG 485
EM+DNNC PDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGV+PNAVTYTTVINAYGRAG
Sbjct: 361 EMKDNNCTPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVMPNAVTYTTVINAYGRAG 420
Query: 486 KEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITWN 545
KE KALQLFNQMKKSGCVPNVCTYNSILALLGKKSR EEMIKILSDMR NGCSPNRITWN
Sbjct: 421 KEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRPEEMIKILSDMRINGCSPNRITWN 480
Query: 546 TMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIKA 605
TMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIKA
Sbjct: 481 TMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIKA 540
Query: 606 GFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGL 665
GFTPCVTTYNALLNALARRGDWK AESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGL
Sbjct: 541 GFTPCVTTYNALLNALARRGDWKGAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGL 600
Query: 666 ERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLSI 725
ERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEEL+KNGYKPDLVIFNSMLSI
Sbjct: 601 ERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDLVIFNSMLSI 660
Query: 726 FAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGEKPD 785
FAKNNMYERAHEMLHLIREGGLQPDLVTYN+LMNMYARRGECWKAEEIL GLIKSGEKPD
Sbjct: 661 FAKNNMYERAHEMLHLIREGGLQPDLVTYNNLMNMYARRGECWKAEEILNGLIKSGEKPD 720
Query: 786 LVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEVIS 845
LVSYNTI+KGFC+QGLMQEAIRI+S MT IRPCIFTYNTFVSGYAGRGMFAEVDEVIS
Sbjct: 721 LVSYNTIIKGFCKQGLMQEAIRIMSAMTAREIRPCIFTYNTFVSGYAGRGMFAEVDEVIS 780
Query: 846 YMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNIDHSFDYHSTQRLASHVREMM 905
YMIQNNCRPNELTYKIVVDGYCKARK++EAMDFVFGIKNIDH FDYHSTQRLASH+REMM
Sbjct: 781 YMIQNNCRPNELTYKIVVDGYCKARKYQEAMDFVFGIKNIDHLFDYHSTQRLASHIREMM 840
Query: 906 NS 908
+S
Sbjct: 841 SS 842
BLAST of Sgr029824 vs. ExPASy TrEMBL
Match:
A0A5A7UPS9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00250 PE=4 SV=1)
HSP 1 Score: 1572.4 bits (4070), Expect = 0.0e+00
Identity = 768/843 (91.10%), Postives = 808/843 (95.85%), Query Frame = 0
Query: 66 MEGALFPNRCPLPVSRPIQPTQTLKFNSTTL-PPPPPSPPSSSFPIDTLLQHLLQLSLPP 125
MEG+ FPNRC LPVSRPIQP QTLKFNSTTL PPPPPSPPSSS PIDTLLQHLL LSL P
Sbjct: 1 MEGSFFPNRCTLPVSRPIQPNQTLKFNSTTLPPPPPPSPPSSSIPIDTLLQHLLHLSLSP 60
Query: 126 TDTVHKLKPVNVPRKNVAPLPSLQISVNSTKKQREGPQFKKPVLNSAPQFEYNDEEIRDG 185
D+ HKLKPVNV +KNVA LPSLQISV+STKK+R+G Q KKPVLNSAPQFEY+DEEIRDG
Sbjct: 61 NDSAHKLKPVNVAKKNVAHLPSLQISVDSTKKRRDGAQLKKPVLNSAPQFEYSDEEIRDG 120
Query: 186 PLQFLSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLEVDLVSLLKALDLSGNSERAILLF 245
PLQFLSK+G+CLLNS+ QPFD L++ FDSVK ELLEVD+VSLLKALD+SGNSERAILLF
Sbjct: 121 PLQFLSKKGICLLNSIAAQPFDSLDSLFDSVKSELLEVDIVSLLKALDVSGNSERAILLF 180
Query: 246 EWVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILHA 305
EWVVSN+ SG++K D+KAVELMIRILGRESKYSIAL+LFD+IPIDKYSLDVRACTTILHA
Sbjct: 181 EWVVSNTVSGDVKLDSKAVELMIRILGRESKYSIALELFDKIPIDKYSLDVRACTTILHA 240
Query: 306 YSRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEF 365
YSRNGKYKQAIAMFERMK+CGL PSLVTYNVMLDVYGKMGRSWDKIL LLDEMR+EGL+F
Sbjct: 241 YSRNGKYKQAIAMFERMKECGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQF 300
Query: 366 DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 425
DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL
Sbjct: 301 DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 360
Query: 426 KEMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRA 485
KEMEDNNC PDSVTYNELVAAYVRAGFYEEGAAVIDTMT KGV+PNAVTYTTVINAYGRA
Sbjct: 361 KEMEDNNCTPDSVTYNELVAAYVRAGFYEEGAAVIDTMTRKGVMPNAVTYTTVINAYGRA 420
Query: 486 GKEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITW 545
GKE KALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMR NGC PNRITW
Sbjct: 421 GKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITW 480
Query: 546 NTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIK 605
NT+LAMCGDKGKHKFVNHVFREMKNCGFEPG+DTFNTLISAYGRCGSE+DAAKMY+EM+K
Sbjct: 481 NTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYEEMMK 540
Query: 606 AGFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG 665
AGFTPC TTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG
Sbjct: 541 AGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG 600
Query: 666 LERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLS 725
LERIEKDIYDG IFPSWVLLRTLILANFKCRAVRGMERAFEEL+KNGYKPD+VIFNSMLS
Sbjct: 601 LERIEKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLS 660
Query: 726 IFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGEKP 785
IFAKNNMYERAHEMLHLIRE GLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGE P
Sbjct: 661 IFAKNNMYERAHEMLHLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGENP 720
Query: 786 DLVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEVI 845
DLVSYNTI+KGFCRQGLMQEAIRI+SEMTT GIRPCIFTYNTFVSGYAGR MFAEVDEVI
Sbjct: 721 DLVSYNTIIKGFCRQGLMQEAIRIMSEMTTRGIRPCIFTYNTFVSGYAGRRMFAEVDEVI 780
Query: 846 SYMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNIDHSFDYHSTQRLASHVREM 905
SYMIQNNC+PNELTYKI+VDGYCKARK+++AMDFVFGIKNID SFD HSTQRLASHVR+M
Sbjct: 781 SYMIQNNCKPNELTYKIIVDGYCKARKYQDAMDFVFGIKNIDDSFDNHSTQRLASHVRDM 840
Query: 906 MNS 908
MN+
Sbjct: 841 MNT 843
BLAST of Sgr029824 vs. ExPASy TrEMBL
Match:
A0A1S3BR96 (pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492828 PE=4 SV=1)
HSP 1 Score: 1572.4 bits (4070), Expect = 0.0e+00
Identity = 768/843 (91.10%), Postives = 808/843 (95.85%), Query Frame = 0
Query: 66 MEGALFPNRCPLPVSRPIQPTQTLKFNSTTL-PPPPPSPPSSSFPIDTLLQHLLQLSLPP 125
MEG+ FPNRC LPVSRPIQP QTLKFNSTTL PPPPPSPPSSS PIDTLLQHLL LSL P
Sbjct: 1 MEGSFFPNRCTLPVSRPIQPNQTLKFNSTTLPPPPPPSPPSSSIPIDTLLQHLLHLSLSP 60
Query: 126 TDTVHKLKPVNVPRKNVAPLPSLQISVNSTKKQREGPQFKKPVLNSAPQFEYNDEEIRDG 185
D+ HKLKPVNV +KNVA LPSLQISV+STKK+R+G Q KKPVLNSAPQFEY+DEEIRDG
Sbjct: 61 NDSAHKLKPVNVAKKNVAHLPSLQISVDSTKKRRDGAQLKKPVLNSAPQFEYSDEEIRDG 120
Query: 186 PLQFLSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLEVDLVSLLKALDLSGNSERAILLF 245
PLQFLSK+G+CLLNS+ QPFD L++ FDSVK ELLEVD+VSLLKALD+SGNSERAILLF
Sbjct: 121 PLQFLSKKGICLLNSIAAQPFDSLDSLFDSVKSELLEVDIVSLLKALDVSGNSERAILLF 180
Query: 246 EWVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILHA 305
EWVVSN+ SG++K D+KAVELMIRILGRESKYSIAL+LFD+IPIDKYSLDVRACTTILHA
Sbjct: 181 EWVVSNTVSGDVKLDSKAVELMIRILGRESKYSIALELFDKIPIDKYSLDVRACTTILHA 240
Query: 306 YSRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEF 365
YSRNGKYKQAIAMFERMK+CGL PSLVTYNVMLDVYGKMGRSWDKIL LLDEMR+EGL+F
Sbjct: 241 YSRNGKYKQAIAMFERMKECGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQF 300
Query: 366 DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 425
DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL
Sbjct: 301 DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 360
Query: 426 KEMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRA 485
KEMEDNNC PDSVTYNELVAAYVRAGFYEEGAAVIDTMT KGV+PNAVTYTTVINAYGRA
Sbjct: 361 KEMEDNNCTPDSVTYNELVAAYVRAGFYEEGAAVIDTMTRKGVMPNAVTYTTVINAYGRA 420
Query: 486 GKEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITW 545
GKE KALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMR NGC PNRITW
Sbjct: 421 GKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITW 480
Query: 546 NTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIK 605
NT+LAMCGDKGKHKFVNHVFREMKNCGFEPG+DTFNTLISAYGRCGSE+DAAKMY+EM+K
Sbjct: 481 NTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYEEMMK 540
Query: 606 AGFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG 665
AGFTPC TTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG
Sbjct: 541 AGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG 600
Query: 666 LERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLS 725
LERIEKDIYDG IFPSWVLLRTLILANFKCRAVRGMERAFEEL+KNGYKPD+VIFNSMLS
Sbjct: 601 LERIEKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLS 660
Query: 726 IFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGEKP 785
IFAKNNMYERAHEMLHLIRE GLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGE P
Sbjct: 661 IFAKNNMYERAHEMLHLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGENP 720
Query: 786 DLVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEVI 845
DLVSYNTI+KGFCRQGLMQEAIRI+SEMTT GIRPCIFTYNTFVSGYAGR MFAEVDEVI
Sbjct: 721 DLVSYNTIIKGFCRQGLMQEAIRIMSEMTTRGIRPCIFTYNTFVSGYAGRRMFAEVDEVI 780
Query: 846 SYMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNIDHSFDYHSTQRLASHVREM 905
SYMIQNNC+PNELTYKI+VDGYCKARK+++AMDFVFGIKNID SFD HSTQRLASHVR+M
Sbjct: 781 SYMIQNNCKPNELTYKIIVDGYCKARKYQDAMDFVFGIKNIDDSFDNHSTQRLASHVRDM 840
Query: 906 MNS 908
MN+
Sbjct: 841 MNT 843
BLAST of Sgr029824 vs. ExPASy TrEMBL
Match:
A0A5D3BQB6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00630 PE=4 SV=1)
HSP 1 Score: 1567.0 bits (4056), Expect = 0.0e+00
Identity = 766/843 (90.87%), Postives = 806/843 (95.61%), Query Frame = 0
Query: 66 MEGALFPNRCPLPVSRPIQPTQTLKFNSTTL-PPPPPSPPSSSFPIDTLLQHLLQLSLPP 125
MEG+ FPNRC LPVSRPIQP QTLKFNSTTL PPPPPSPPSSS PIDTLLQHLL LSL P
Sbjct: 1 MEGSFFPNRCTLPVSRPIQPNQTLKFNSTTLPPPPPPSPPSSSIPIDTLLQHLLHLSLSP 60
Query: 126 TDTVHKLKPVNVPRKNVAPLPSLQISVNSTKKQREGPQFKKPVLNSAPQFEYNDEEIRDG 185
D+ HKLKPVNV +KNVA LPSLQISV+STKK+R+G KKPVLNSAPQFEY+DEEIRDG
Sbjct: 61 NDSAHKLKPVNVAKKNVAHLPSLQISVDSTKKRRDGAPLKKPVLNSAPQFEYSDEEIRDG 120
Query: 186 PLQFLSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLEVDLVSLLKALDLSGNSERAILLF 245
PLQFLSK+G+CLLNS+ QPFD L++ FDSVK ELLEVD+VSLLKALD+SGNSERAILLF
Sbjct: 121 PLQFLSKKGICLLNSIAAQPFDSLDSLFDSVKSELLEVDIVSLLKALDVSGNSERAILLF 180
Query: 246 EWVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILHA 305
EWVVSN+ SG++K D+KAVELMIRILGRESKYSIAL+LFD+IPIDKYSLDVRACTTILHA
Sbjct: 181 EWVVSNTVSGDVKLDSKAVELMIRILGRESKYSIALELFDKIPIDKYSLDVRACTTILHA 240
Query: 306 YSRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEF 365
YSRNGKYKQAIAMFERMK+CGL PSLVTYNVMLDVYGKMGRSWDKIL LLDEMR+EGL+F
Sbjct: 241 YSRNGKYKQAIAMFERMKECGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQF 300
Query: 366 DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 425
DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL
Sbjct: 301 DEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 360
Query: 426 KEMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRA 485
KEMEDNNC PDSVTYNELVAAYVRAGFYEEGAAVIDTMT KGV+PNAVTYTTVINAYGRA
Sbjct: 361 KEMEDNNCTPDSVTYNELVAAYVRAGFYEEGAAVIDTMTRKGVMPNAVTYTTVINAYGRA 420
Query: 486 GKEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITW 545
GKE KALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMR NGC PNRITW
Sbjct: 421 GKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITW 480
Query: 546 NTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIK 605
NT+LAMCGDKGKHKFVNHVFREMKNCGFEPG+DTFNTLISAYGRCGSE+DAAKMY+EM+K
Sbjct: 481 NTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYEEMMK 540
Query: 606 AGFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG 665
AGFTPC TTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG
Sbjct: 541 AGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRG 600
Query: 666 LERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLS 725
LERIEKDIY G IFPSWVLLRTLILANFKCRAVRGMERAFEEL+KNGYKPD+VIFNSMLS
Sbjct: 601 LERIEKDIYAGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLS 660
Query: 726 IFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGEKP 785
IFAKNNMYERAHEMLHLIRE GLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGE P
Sbjct: 661 IFAKNNMYERAHEMLHLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGENP 720
Query: 786 DLVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEVI 845
DLVSYNTI+KGFCRQGLMQEAIRI+SEMTT GIRPCIFTYNTFVSGYAGR MFAEVDEVI
Sbjct: 721 DLVSYNTIIKGFCRQGLMQEAIRIMSEMTTRGIRPCIFTYNTFVSGYAGRRMFAEVDEVI 780
Query: 846 SYMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNIDHSFDYHSTQRLASHVREM 905
SYMIQNNC+PNELTYKI+VDGYCKARK+++AMDFVFGIKNID SFD HSTQRLASHVR+M
Sbjct: 781 SYMIQNNCKPNELTYKIIVDGYCKARKYQDAMDFVFGIKNIDDSFDNHSTQRLASHVRDM 840
Query: 906 MNS 908
MN+
Sbjct: 841 MNT 843
BLAST of Sgr029824 vs. ExPASy TrEMBL
Match:
A0A0A0LMF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059820 PE=4 SV=1)
HSP 1 Score: 1549.6 bits (4011), Expect = 0.0e+00
Identity = 760/844 (90.05%), Postives = 799/844 (94.67%), Query Frame = 0
Query: 66 MEGALFPNRCPLPVSRPIQPTQTLKFNSTTLPP--PPPSPPSSSFPIDTLLQHLLQLSLP 125
MEGALFPNRCPLPVSRPIQP QTLKFNSTTLPP PPPSPPSSS PIDTLLQHLL LSL
Sbjct: 1 MEGALFPNRCPLPVSRPIQPNQTLKFNSTTLPPPLPPPSPPSSSIPIDTLLQHLLHLSLS 60
Query: 126 PTDTVHKLKPVNVPRKNVAPLPSLQISVNSTKKQREGPQFKKPVLNSAPQFEYNDEEIRD 185
P D+ HKLKPVNV +KNVA LPSLQIS++STKK+R+G Q KK VLNSAPQFEY+D+EIRD
Sbjct: 61 PNDSAHKLKPVNVAKKNVAHLPSLQISMDSTKKRRDGAQLKKLVLNSAPQFEYSDKEIRD 120
Query: 186 GPLQFLSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLEVDLVSLLKALDLSGNSERAILL 245
GPLQFLSK+G+CLLNS+ +PFD LNA FDSVK ELLEVD+VSLLKALD+ G SERAILL
Sbjct: 121 GPLQFLSKKGICLLNSIAAEPFDSLNALFDSVKSELLEVDIVSLLKALDVLGKSERAILL 180
Query: 246 FEWVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILH 305
FEWVVSNS SG++K D+KAVELMIRILGRESKYSIALKL D+IPIDKYSLDVRACTTILH
Sbjct: 181 FEWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILH 240
Query: 306 AYSRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLE 365
AYSRNGKYKQAIAMFERMKDCGL PSLVTYNVMLDVYGKMGRSWDKIL LLDEMR+EGL+
Sbjct: 241 AYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQ 300
Query: 366 FDEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNI 425
FDEFTCSTVISACGREGLINEAKEFFV LKSSGYEPGTVTYNALLQVFGKAGIYSEALNI
Sbjct: 301 FDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNI 360
Query: 426 LKEMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGR 485
LKEMEDNNC DSVTYNELVAAYVRAGFYEEGA VIDTMT KGV+PNAVTYTTVINAYGR
Sbjct: 361 LKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGR 420
Query: 486 AGKEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRIT 545
AGKE KALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMR NGC PNRIT
Sbjct: 421 AGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRIT 480
Query: 546 WNTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMI 605
WNT+LAMCGDKGKHKFVNHVFREMKNCGFEPG+DTFNTLISAYGRCGSE+DAAKMYDEM+
Sbjct: 481 WNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMM 540
Query: 606 KAGFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVR 665
KAGFTPC TTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVR
Sbjct: 541 KAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVR 600
Query: 666 GLERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSML 725
GLERI KDIYDG IFPSWVLLRTLILANFKCRAVRGMERAFEEL+KNGYKPD+VIFNSML
Sbjct: 601 GLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSML 660
Query: 726 SIFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGEK 785
SIFAKNNMYERA +ML LIRE GLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGE
Sbjct: 661 SIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGES 720
Query: 786 PDLVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEV 845
PDLVSYNTI+KGFCRQGLMQEAIR++SEMTT GI PCIFTYNTFVSGYAGRGMFAEVDEV
Sbjct: 721 PDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEV 780
Query: 846 ISYMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNIDHSFDYHSTQRLASHVRE 905
ISYMIQ NC+PNELTYKI+VDGYCKARK+++AMDF+FGIKNID SFD HSTQRLASHVR+
Sbjct: 781 ISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFIFGIKNIDDSFDNHSTQRLASHVRD 840
Query: 906 MMNS 908
MMN+
Sbjct: 841 MMNT 844
BLAST of Sgr029824 vs. TAIR 10
Match:
AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 1136.7 bits (2939), Expect = 0.0e+00
Identity = 564/850 (66.35%), Postives = 678/850 (79.76%), Query Frame = 0
Query: 66 MEGALFPNRCPLPVSRPIQP-----TQTLKFNSTTLPPPPPSPPSSSFPIDTLLQHLLQL 125
M+GALFP++ P P+ P Q++KF+S TL PPPSPP SFP+D+LL HL+ L
Sbjct: 1 MDGALFPHKPPYPIQSKRPPPSQSSNQSIKFSSATLHLPPPSPP--SFPLDSLLHHLVHL 60
Query: 126 SLPPTDTVHKLKPVNVPRKN---VAPLPSLQISVNSTKKQREGPQFKKPVLNSAPQFEYN 185
S PP PR + A PSL++S +S+ KP+L E
Sbjct: 61 SSPP------------PRHSNSAAARFPSLEVSTDSSS--------SKPILG----IEIE 120
Query: 186 DEEIRDGPLQFLSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLEVDLVSLLKALDLSGNS 245
+E R+G L+ L K+ + L+NS+ EQP GL+ FFDSVK ELL DLVSL+K LD SG+
Sbjct: 121 NE--RNGSLKLLCKKEVVLVNSIVEQPLTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHW 180
Query: 246 ERAILLFEWVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRA 305
ERA+ LFEW+V +S SG LK D++ +E+ +RILGRES+YS+A KL D+IP+ +Y LDVRA
Sbjct: 181 ERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRA 240
Query: 306 CTTILHAYSRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEM 365
TTILHAYSR GKY++AI +FERMK+ G P+LVTYNV+LDV+GKMGRSW KILG+LDEM
Sbjct: 241 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 300
Query: 366 RSEGLEFDEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIY 425
RS+GL+FDEFTCSTV+SAC REGL+ EAKEFF LKS GYEPGTVTYNALLQVFGKAG+Y
Sbjct: 301 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 360
Query: 426 SEALNILKEMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTV 485
+EAL++LKEME+N+C DSVTYNELVAAYVRAGF +E A VI+ MT KGV+PNA+TYTTV
Sbjct: 361 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV 420
Query: 486 INAYGRAGKEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGC 545
I+AYG+AGKE +AL+LF MK++GCVPN CTYN++L+LLGKKSRS EMIK+L DM++NGC
Sbjct: 421 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 480
Query: 546 SPNRITWNTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAK 605
SPNR TWNTMLA+CG+KG KFVN VFREMK+CGFEP RDTFNTLISAYGRCGSE+DA+K
Sbjct: 481 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 540
Query: 606 MYDEMIKAGFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYA 665
MY EM +AGF CVTTYNALLNALAR+GDW++ E+V+ DM++KGFKP ETS+SLML CYA
Sbjct: 541 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 600
Query: 666 KGGNVRGLERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLV 725
KGGN G+ERIE I +G IFPSW+LLRTL+LANFKCRA+ G ERAF K+GYKPD+V
Sbjct: 601 KGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMV 660
Query: 726 IFNSMLSIFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGL 785
IFNSMLSIF +NNMY++A +L IRE GL PDLVTYNSLM+MY RRGECWKAEEILK L
Sbjct: 661 IFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 720
Query: 786 IKSGEKPDLVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMF 845
KS KPDLVSYNT++KGFCR+GLMQEA+R+LSEMT GIRPCIFTYNTFVSGY GMF
Sbjct: 721 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMF 780
Query: 846 AEVDEVISYMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNIDHSFDYHSTQRL 905
AE+++VI M +N+CRPNELT+K+VVDGYC+A K+ EAMDFV IK D FD S QRL
Sbjct: 781 AEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRL 822
Query: 906 ASHVREMMNS 908
A VRE + S
Sbjct: 841 ALRVRENLES 822
BLAST of Sgr029824 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 591.3 bits (1523), Expect = 1.3e-168
Identity = 290/708 (40.96%), Postives = 444/708 (62.71%), Query Frame = 0
Query: 189 LSKRGMCLLNSVTEQPFDGLNAFFDSVKFELLE----------VDLVSLLKALDLSGNSE 248
LS +G +L S+ E FD + DSV EL E +L++ LK L +
Sbjct: 95 LSPQGQQVLRSLIEPNFD--SGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFD 154
Query: 249 RAILLFEWVVSNSGSGNLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRAC 308
A+ F+W + ++ DN V ++I +LG+E + S A +F+ + D +SLDV +
Sbjct: 155 LALRAFDWFMKQKDYQSML-DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSY 214
Query: 309 TTILHAYSRNGKYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMR 368
T+++ A++ +G+Y++A+ +F++M++ G P+L+TYNV+L+V+GKMG W+KI L+++M+
Sbjct: 215 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 274
Query: 369 SEGLEFDEFTCSTVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYS 428
S+G+ D +T +T+I+ C R L EA + F +K++G+ VTYNALL V+GK+
Sbjct: 275 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 334
Query: 429 EALNILKEMEDNNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVI 488
EA+ +L EM N +P VTYN L++AY R G +E + + M KG P+ TYTT++
Sbjct: 335 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 394
Query: 489 NAYGRAGKEAKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCS 548
+ + RAGK A+ +F +M+ +GC PN+CT+N+ + + G + + EM+KI ++ G S
Sbjct: 395 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 454
Query: 549 PNRITWNTMLAMCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKM 608
P+ +TWNT+LA+ G G V+ VF+EMK GF P R+TFNTLISAY RCGS A +
Sbjct: 455 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 514
Query: 609 YDEMIKAGFTPCVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAK 668
Y M+ AG TP ++TYN +L ALAR G W+ +E VL +M + KPNE ++ +LH YA
Sbjct: 515 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 574
Query: 669 GGNVRGLERIEKDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVI 728
G + + + +++Y G I P VLL+TL+L KC + ERAF EL + G+ PD+
Sbjct: 575 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 634
Query: 729 FNSMLSIFAKNNMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLI 788
NSM+SI+ + M +A+ +L ++E G P + TYNSLM M++R + K+EEIL+ ++
Sbjct: 635 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 694
Query: 789 KSGEKPDLVSYNTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFA 848
G KPD++SYNT++ +CR M++A RI SEM GI P + TYNTF+ YA MF
Sbjct: 695 AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFE 754
Query: 849 EVDEVISYMIQNNCRPNELTYKIVVDGYCKARKFKEAMDFVFGIKNID 887
E V+ YMI++ CRPN+ TY +VDGYCK + EA FV ++N+D
Sbjct: 755 EAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLD 799
BLAST of Sgr029824 vs. TAIR 10
Match:
AT1G74850.1 (plastid transcriptionally active 2 )
HSP 1 Score: 292.4 bits (747), Expect = 1.3e-78
Identity = 171/635 (26.93%), Postives = 305/635 (48.03%), Query Frame = 0
Query: 196 LLNSVTEQPFDG-LNAFFDSVKFELLEVDLVSLLKALDLSGNSERAILLFEWVVSNSGSG 255
L+N ++ P G + D K +L D + K G+ +R++ LF+++
Sbjct: 79 LINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIW-- 138
Query: 256 NLKPDNKAVELMIRILGRESKYSIALKLFDEIPIDKYSLDVRACTTILHAYSRNGKYKQA 315
KP+ +MI +LGRE L++FDE+P S V + T +++AY RNG+Y+ +
Sbjct: 139 -CKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETS 198
Query: 316 IAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEFDEFTCSTVIS 375
+ + +RMK+ + PS++TYN +++ + G W+ +LGL EMR EG++ D T +T++S
Sbjct: 199 LELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLS 258
Query: 376 ACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCAP 435
AC GL +EA+ F + G P TY+ L++ FGK + ++L EM P
Sbjct: 259 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 318
Query: 436 DSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRAGKEAKALQLF 495
D +YN L+ AY ++G +E V M G PNA TY+ ++N +G++G+ QLF
Sbjct: 319 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 378
Query: 496 NQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITWNTMLAMCGDK 555
+MK S P+ TYN ++ + G+ +E++ + DM P+ T+ ++ CG
Sbjct: 379 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 438
Query: 556 GKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIKAGFTPCVTTY 615
G H+ + + M P + +I A+G+ +A ++ M + G P + T+
Sbjct: 439 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 498
Query: 616 NALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIEKDIYD 675
++LL + AR G K +E++L + + G N +F+ + Y +GG + D+
Sbjct: 499 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 558
Query: 676 GHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLSIFAKNNMYER 735
P L ++ R V FEE+ + P ++ + ML+++ K ++
Sbjct: 559 SRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDD 618
Query: 736 AHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWK-AEEILKGLIKSGEKPDLVSYNTIM 795
+E+L + + ++ W+ E +L L G + YN ++
Sbjct: 619 VNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALL 678
Query: 796 KGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFV 829
G + A R+L+E T G+ P +F N V
Sbjct: 679 DALWWLGQKERAARVLNEATKRGLFPELFRKNKLV 710
BLAST of Sgr029824 vs. TAIR 10
Match:
AT1G63080.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 254.2 bits (648), Expect = 3.9e-67
Identity = 145/555 (26.13%), Postives = 273/555 (49.19%), Query Frame = 0
Query: 310 KYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEFDEFTC 369
K +A+ +F M PS+V ++ +L KM + +D ++ ++M G+ + +T
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM-KKFDLVISFGEKMEILGVSHNLYTY 104
Query: 370 STVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMED 429
+ +I+ R ++ A + GY P VT N+LL F SEA+ ++ +M +
Sbjct: 105 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 164
Query: 430 NNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRAGKEAK 489
PD+VT+ LV + E A+++ M KG P+ VTY VIN + G+
Sbjct: 165 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 224
Query: 490 ALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITWNTMLA 549
AL L N+M+K +V Y++++ L K ++ + + ++M G P+ T++++++
Sbjct: 225 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 284
Query: 550 MCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIKAGFTP 609
+ G+ + + +M P TFN+LI A+ + G I+A K++DEMI+ P
Sbjct: 285 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 344
Query: 610 CVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIE 669
+ TYN+L+N A+ + M +K P+ +++ +++ + K V +
Sbjct: 345 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 404
Query: 670 KDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLSIFAKN 729
+D+ + + V TLI F+ + F+++V +G P+++ +N++L KN
Sbjct: 405 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 464
Query: 730 NMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGEKPDLVSY 789
E+A + +++ ++PD+ TYN + + G+ ++ L G KPD+++Y
Sbjct: 465 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 524
Query: 790 NTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQ 849
NT++ GFC++GL +EA + +M G P TYNT + + G A E+I M
Sbjct: 525 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 584
Query: 850 NNCRPNELTYKIVVD 865
+ TY +V D
Sbjct: 585 CRFAGDASTYGLVTD 598
BLAST of Sgr029824 vs. TAIR 10
Match:
AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 253.4 bits (646), Expect = 6.7e-67
Identity = 149/544 (27.39%), Postives = 265/544 (48.71%), Query Frame = 0
Query: 310 KYKQAIAMFERMKDCGLCPSLVTYNVMLDVYGKMGRSWDKILGLLDEMRSEGLEFDEFTC 369
K A+ +F M PS+V ++ +L KM + +D ++ L ++M++ G+ + +T
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNK-FDLVISLGEQMQNLGISHNLYTY 120
Query: 370 STVISACGREGLINEAKEFFVGLKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMED 429
S +I+ R ++ A + GYEP VT N+LL F S+A++++ +M +
Sbjct: 121 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 180
Query: 430 NNCAPDSVTYNELVAAYVRAGFYEEGAAVIDTMTCKGVLPNAVTYTTVINAYGRAGKEAK 489
PDS T+N L+ R E A++D M KG P+ VTY V+N + G
Sbjct: 181 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 240
Query: 490 ALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRTNGCSPNRITWNTMLA 549
AL L +M++ P V YN+I+ L + + + ++M G PN +T+N+++
Sbjct: 241 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 300
Query: 550 MCGDKGKHKFVNHVFREMKNCGFEPGRDTFNTLISAYGRCGSEIDAAKMYDEMIKAGFTP 609
+ G+ + + +M P TF+ LI A+ + G ++A K+YDEMIK P
Sbjct: 301 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 360
Query: 610 CVTTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIE 669
+ TY++L+N A+ + M +K PN +++ ++ + K V +
Sbjct: 361 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 420
Query: 670 KDIYDGHIFPSWVLLRTLILANFKCRAVRGMERAFEELVKNGYKPDLVIFNSMLSIFAKN 729
+++ + + V TLI F+ R + F+++V +G PD++ ++ +L N
Sbjct: 421 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 480
Query: 730 NMYERAHEMLHLIREGGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGEKPDLVSY 789
E A + ++ ++PD+ TYN ++ + G+ ++ L G KP++V+Y
Sbjct: 481 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 540
Query: 790 NTIMKGFCRQGLMQEAIRILSEMTTLGIRPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQ 849
T+M GFCR+GL +EA + EM G P TYNT + + G A E+I M
Sbjct: 541 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM-- 600
Query: 850 NNCR 854
+CR
Sbjct: 601 RSCR 601
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022153360.1 | 0.0e+00 | 93.71 | pentatricopeptide repeat-containing protein At2g18940, chloroplastic [Momordica ... | [more] |
XP_038890555.1 | 0.0e+00 | 92.41 | pentatricopeptide repeat-containing protein At2g18940, chloroplastic [Benincasa ... | [more] |
XP_008451598.1 | 0.0e+00 | 91.10 | PREDICTED: pentatricopeptide repeat-containing protein At2g18940, chloroplastic ... | [more] |
TYK01375.1 | 0.0e+00 | 90.87 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_004148341.1 | 0.0e+00 | 90.05 | pentatricopeptide repeat-containing protein At2g18940, chloroplastic [Cucumis sa... | [more] |
Match Name | E-value | Identity | Description | |
O64624 | 0.0e+00 | 66.35 | Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... | [more] |
B8Y6I0 | 5.1e-237 | 51.09 | Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457... | [more] |
Q9LYZ9 | 1.9e-167 | 40.96 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
Q9S7Q2 | 1.8e-77 | 26.93 | Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... | [more] |
Q9CAN5 | 5.5e-66 | 26.13 | Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DGL5 | 0.0e+00 | 93.71 | pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Momordic... | [more] |
A0A5A7UPS9 | 0.0e+00 | 91.10 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BR96 | 0.0e+00 | 91.10 | pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Cucumis ... | [more] |
A0A5D3BQB6 | 0.0e+00 | 90.87 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A0A0LMF0 | 0.0e+00 | 90.05 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059820 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G18940.1 | 0.0e+00 | 66.35 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G02860.1 | 1.3e-168 | 40.96 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G74850.1 | 1.3e-78 | 26.93 | plastid transcriptionally active 2 | [more] |
AT1G63080.1 | 3.9e-67 | 26.13 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G63130.1 | 6.7e-67 | 27.39 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |