Sgr029411 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr029411
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionArogenate dehydratase
Locationtig00153293: 2013811 .. 2014026 (+)
RNA-Seq ExpressionSgr029411
SyntenySgr029411
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTTAAGTTTGGACCCTTCCAGGGTAGTGCTCGAACTTCTTCTCTGTTGTGGCCATTTCAGATTCTGGGTCTGGGTGTACTGGAATTCCTTGAACTTGAGGATATTTTGTCCGGCTCGGAAATGGAATCTTGTTGTATGGTAGTTTTGGCTCAGAGAGCTATCACTCCCGTTGAAGATGAAAACCCGGTGTTGACTCTTCTCAGCGATTAA

mRNA sequence

ATGGCTCTTAAGTTTGGACCCTTCCAGGGTAGTGCTCGAACTTCTTCTCTGTTGTGGCCATTTCAGATTCTGGGTCTGGGTGTACTGGAATTCCTTGAACTTGAGGATATTTTGTCCGGCTCGGAAATGGAATCTTGTTGTATGGTAGTTTTGGCTCAGAGAGCTATCACTCCCGTTGAAGATGAAAACCCGGTGTTGACTCTTCTCAGCGATTAA

Coding sequence (CDS)

ATGGCTCTTAAGTTTGGACCCTTCCAGGGTAGTGCTCGAACTTCTTCTCTGTTGTGGCCATTTCAGATTCTGGGTCTGGGTGTACTGGAATTCCTTGAACTTGAGGATATTTTGTCCGGCTCGGAAATGGAATCTTGTTGTATGGTAGTTTTGGCTCAGAGAGCTATCACTCCCGTTGAAGATGAAAACCCGGTGTTGACTCTTCTCAGCGATTAA

Protein sequence

MALKFGPFQGSARTSSLLWPFQILGLGVLEFLELEDILSGSEMESCCMVVLAQRAITPVEDENPVLTLLSD
Homology
[Close]
BLAST of Sgr029411 vs. NCBI nr
Match: XP_022142246.1 (arogenate dehydratase/prephenate dehydratase 1, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 56.6 bits (135), Expect = 1.0e-04
Identity = 36/66 (54.55%), Postives = 38/66 (57.58%), Query Frame = 0 

Query: 1  MALKFGPFQGSARTSSLLWPFQILGLGVL--EFLELEDILSGSEMESCCMVVLAQRAITP 60
          MALK GPFQG ARTSSLL      G G          D +   + ESC M VLAQRAITP
Sbjct: 1  MALKAGPFQGCARTSSLLVAISDSGSGCARNSLNWRNDFVRLRKWESCRMEVLAQRAITP 60

Query: 61 VEDENP 65
          VE E P
Sbjct: 61 VEGEKP 66

[Close]
BLAST of Sgr029411 vs. NCBI nr
Match: XP_022142247.1 (arogenate dehydratase/prephenate dehydratase 1, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 56.6 bits (135), Expect = 1.0e-04
Identity = 36/66 (54.55%), Postives = 38/66 (57.58%), Query Frame = 0 

Query: 1  MALKFGPFQGSARTSSLLWPFQILGLGVL--EFLELEDILSGSEMESCCMVVLAQRAITP 60
          MALK GPFQG ARTSSLL      G G          D +   + ESC M VLAQRAITP
Sbjct: 1  MALKAGPFQGCARTSSLLVAISDSGSGCARNSLNWRNDFVRLRKWESCRMEVLAQRAITP 60

Query: 61 VEDENP 65
          VE E P
Sbjct: 61 VEGEKP 66

[Close]
BLAST of Sgr029411 vs. ExPASy TrEMBL
Match: A0A6J1CLM6 (Arogenate dehydratase OS=Momordica charantia OX=3673 GN=LOC111012409 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.9e-05
Identity = 36/66 (54.55%), Postives = 38/66 (57.58%), Query Frame = 0 

Query: 1  MALKFGPFQGSARTSSLLWPFQILGLGVL--EFLELEDILSGSEMESCCMVVLAQRAITP 60
          MALK GPFQG ARTSSLL      G G          D +   + ESC M VLAQRAITP
Sbjct: 1  MALKAGPFQGCARTSSLLVAISDSGSGCARNSLNWRNDFVRLRKWESCRMEVLAQRAITP 60

Query: 61 VEDENP 65
          VE E P
Sbjct: 61 VEGEKP 66

[Close]
BLAST of Sgr029411 vs. ExPASy TrEMBL
Match: A0A6J1CM81 (Arogenate dehydratase OS=Momordica charantia OX=3673 GN=LOC111012409 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.9e-05
Identity = 36/66 (54.55%), Postives = 38/66 (57.58%), Query Frame = 0 

Query: 1  MALKFGPFQGSARTSSLLWPFQILGLGVL--EFLELEDILSGSEMESCCMVVLAQRAITP 60
          MALK GPFQG ARTSSLL      G G          D +   + ESC M VLAQRAITP
Sbjct: 1  MALKAGPFQGCARTSSLLVAISDSGSGCARNSLNWRNDFVRLRKWESCRMEVLAQRAITP 60

Query: 61 VEDENP 65
          VE E P
Sbjct: 61 VEGEKP 66

The following BLAST results are available for this feature:
BLAST of Sgr029411 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022142246.11.0e-0454.55arogenate dehydratase/prephenate dehydratase 1, chloroplastic isoform X1 [Momord... [more]
XP_022142247.11.0e-0454.55arogenate dehydratase/prephenate dehydratase 1, chloroplastic isoform X2 [Momord... [more]
BLAST of Sgr029411 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr029411 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CLM64.9e-0554.55Arogenate dehydratase OS=Momordica charantia OX=3673 GN=LOC111012409 PE=4 SV=1[more]
A0A6J1CM814.9e-0554.55Arogenate dehydratase OS=Momordica charantia OX=3673 GN=LOC111012409 PE=4 SV=1[more]
BLAST of Sgr029411 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr029411.1Sgr029411.1mRNA