Sgr029312 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr029312
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Trigger factor like
Location	tig00153293: 1123447 .. 1123913 (+)
RNA-Seq Expression	Sgr029312
Synteny	Sgr029312

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTGGAGCTTTTCGTCTTGGGCTGCACCGGGGTTGTCGTCTTCCTCCACGGAGCTAATTTTTTCTTCCACGCTCTCTCCCAGCACTTCACTATCCGATCTCTCAGGTATCTGATGTTTCCCTTTCCTTCTCGCTGATTATTATCCCTTCCGATTTTTATTTTAATTTGGTTTTTCGTTTGGGGAGTGTTGTTTTCTGTGTTCTTCTTTGAGCACGTTCTGCGAGGATTTAGGGCCTTTCGTTTTGTTTCGGAAGACGACGGTCAATGGAAACTCCGCCGTCTTCTTTCCATTTCTTCCTTTTTCTCTGGTTTGCGATCGACTAACCCTAATTACTGAAACTTTGATGAACGCTCGAATTTGCTTTTGTGTGTCGGCGTAATCTTGTGGCTAATGCGTAGATTTGCTCGTGGTTTCAGTTTCTTGGGTGCGATTGGATGGTAGGAATTGGAGAAGGCGAGTAA

mRNA sequence

ATGGCGTTGGAGCTTTTCGTCTTGGGCTGCACCGGGGTTGTCGTCTTCCTCCACGGAGCTAATTTTTTCTTCCACGCTCTCTCCCAGCACTTCACTATCCGATCTCTCAGCACGTTCTGCGAGGATTTAGGGCCTTTCGTTTTGTTTCGGAAGACGACGGTCAATGGAAACTCCGCCGTCTTCTTTCCATTTCTTCCTTTTTCTCTGTTTCTTGGGTGCGATTGGATGGTAGGAATTGGAGAAGGCGAGTAA

Coding sequence (CDS)

ATGGCGTTGGAGCTTTTCGTCTTGGGCTGCACCGGGGTTGTCGTCTTCCTCCACGGAGCTAATTTTTTCTTCCACGCTCTCTCCCAGCACTTCACTATCCGATCTCTCAGCACGTTCTGCGAGGATTTAGGGCCTTTCGTTTTGTTTCGGAAGACGACGGTCAATGGAAACTCCGCCGTCTTCTTTCCATTTCTTCCTTTTTCTCTGTTTCTTGGGTGCGATTGGATGGTAGGAATTGGAGAAGGCGAGTAA

Protein sequence

MALELFVLGCTGVVVFLHGANFFFHALSQHFTIRSLSTFCEDLGPFVLFRKTTVNGNSAVFFPFLPFSLFLGCDWMVGIGEGE

Homology

[Close]

BLAST of Sgr029312 vs. NCBI nr
Match: KAG7034606.1 (hypothetical protein SDJN02_04336 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 73.2 bits (178), Expect = 1.2e-09
Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = 0


Query: 1  MALELFVLGCTGVVVFLHGANFFFHALSQHFTIRSLSTFCEDLGPFVLFRKTTVNGN 58
          MALEL VLGCTGVV+FLHGANFFFHAL QHFT+RSL         F LF KT++ G+
Sbjct: 1  MALELLVLGCTGVVIFLHGANFFFHALWQHFTVRSLR-------HFPLFLKTSLYGS 50

[Close]

BLAST of Sgr029312 vs. NCBI nr
Match: GAY34585.1 (hypothetical protein CUMW_012220 [Citrus unshiu])

HSP 1 Score: 70.5 bits (171), Expect = 7.9e-09
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 0


Query: 3  LELFVLGCTGVVVFLHGANFFFHALSQHFTIRSLSTFCEDLGP 46
          +ELFVLGCTGVVVFLHGANFFFH LSQH  +RSLST+   + P
Sbjct: 2  MELFVLGCTGVVVFLHGANFFFHVLSQHLAVRSLSTYSSLMQP 44

[Close]

BLAST of Sgr029312 vs. NCBI nr
Match: KAG8634527.1 (hypothetical protein MANES_17G048550v8 [Manihot esculenta])

HSP 1 Score: 69.3 bits (168), Expect = 1.7e-08
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 0


Query: 1  MALELFVLGCTGVVVFLHGANFFFHALSQHFTIRSLS 38
          MA+ELFVLGCTGVV+FLHGANFFFHALSQH  +RSLS
Sbjct: 1  MAVELFVLGCTGVVMFLHGANFFFHALSQHLAVRSLS 37

[Close]

BLAST of Sgr029312 vs. NCBI nr
Match: TYI04626.1 (hypothetical protein ES332_A10G032800v1 [Gossypium tomentosum])

HSP 1 Score: 67.4 bits (163), Expect = 6.6e-08
Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 1  MALELFVLGCTGVVVFLHGANFFFHALSQHFTIRSLST 39
          M +ELFVLGCTGVVVFLHGANFFFH LSQH  +RSL T
Sbjct: 1  MMMELFVLGCTGVVVFLHGANFFFHVLSQHLAVRSLRT 38

[Close]

BLAST of Sgr029312 vs. NCBI nr
Match: KAB2007446.1 (hypothetical protein ES319_D10G030800v1 [Gossypium barbadense] >KAG4124250.1 hypothetical protein ERO13_D10G028000v2 [Gossypium hirsutum] >TYG48642.1 hypothetical protein ES288_D10G031900v1 [Gossypium darwinii] >TYH47922.1 hypothetical protein ES332_D10G032500v1 [Gossypium tomentosum] >TYI59374.1 hypothetical protein E1A91_D10G032200v1 [Gossypium mustelinum])

HSP 1 Score: 67.4 bits (163), Expect = 6.6e-08
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 1  MALELFVLGCTGVVVFLHGANFFFHALSQHFTIRSLS 38
          M +ELFVLGCTGVVVFLHGANFFFH LSQH  +RSLS
Sbjct: 1  MMMELFVLGCTGVVVFLHGANFFFHVLSQHLAVRSLS 37

[Close]

BLAST of Sgr029312 vs. ExPASy TrEMBL
Match: A0A2H5N4Q1 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_012220 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.8e-09
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 0


Query: 3  LELFVLGCTGVVVFLHGANFFFHALSQHFTIRSLSTFCEDLGP 46
          +ELFVLGCTGVVVFLHGANFFFH LSQH  +RSLST+   + P
Sbjct: 2  MELFVLGCTGVVVFLHGANFFFHVLSQHLAVRSLSTYSSLMQP 44

[Close]

BLAST of Sgr029312 vs. ExPASy TrEMBL
Match: A0A5D2AZA5 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A10G032000v1 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.2e-08
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 1  MALELFVLGCTGVVVFLHGANFFFHALSQHFTIRSLS 38
          M +ELFVLGCTGVVVFLHGANFFFH LSQH  +RSLS
Sbjct: 1  MMMELFVLGCTGVVVFLHGANFFFHVLSQHLAVRSLS 37

[Close]

BLAST of Sgr029312 vs. ExPASy TrEMBL
Match: A0A5J5TXY1 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A10G030200v1 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.2e-08
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 1  MALELFVLGCTGVVVFLHGANFFFHALSQHFTIRSLS 38
          M +ELFVLGCTGVVVFLHGANFFFH LSQH  +RSLS
Sbjct: 1  MMMELFVLGCTGVVVFLHGANFFFHVLSQHLAVRSLS 37

[Close]

BLAST of Sgr029312 vs. ExPASy TrEMBL
Match: A0A5D2XGL5 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A10G030800v1 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.2e-08
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 1  MALELFVLGCTGVVVFLHGANFFFHALSQHFTIRSLS 38
          M +ELFVLGCTGVVVFLHGANFFFH LSQH  +RSLS
Sbjct: 1  MMMELFVLGCTGVVVFLHGANFFFHVLSQHLAVRSLS 37

[Close]

BLAST of Sgr029312 vs. ExPASy TrEMBL
Match: A0A5D2J006 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D10G032500v1 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.2e-08
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 1  MALELFVLGCTGVVVFLHGANFFFHALSQHFTIRSLS 38
          M +ELFVLGCTGVVVFLHGANFFFH LSQH  +RSLS
Sbjct: 1  MMMELFVLGCTGVVVFLHGANFFFHVLSQHLAVRSLS 37

The following BLAST results are available for this feature:

BLAST of Sgr029312 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034606.1	1.2e-09	66.67	hypothetical protein SDJN02_04336 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
GAY34585.1	7.9e-09	74.42	hypothetical protein CUMW_012220 [Citrus unshiu]	[more]
KAG8634527.1	1.7e-08	86.49	hypothetical protein MANES_17G048550v8 [Manihot esculenta]	[more]
TYI04626.1	6.6e-08	81.58	hypothetical protein ES332_A10G032800v1 [Gossypium tomentosum]	[more]
KAB2007446.1	6.6e-08	83.78	hypothetical protein ES319_D10G030800v1 [Gossypium barbadense] >KAG4124250.1 hyp...	[more]

BLAST of Sgr029312 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr029312 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2H5N4Q1	3.8e-09	74.42	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_012220 PE=4 SV=1	[more]
A0A5D2AZA5	3.2e-08	83.78	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A10G032000v1 PE=...	[more]
A0A5J5TXY1	3.2e-08	83.78	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A10G030200v1 PE...	[more]
A0A5D2XGL5	3.2e-08	83.78	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A10G030800v1 P...	[more]
A0A5D2J006	3.2e-08	83.78	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D10G032500v1 P...	[more]

BLAST of Sgr029312 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr029312.1	Sgr029312.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane