Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAGCCTTTCTCTTCTACTCCAAAGTCCACTGTCGGAGAAGGAAGCAGACCTTGTGCTCGAGCTGCGCGATGCCAACAGAGACGGCGTTCTTGATAAGAAGGAACTGATGTGTGATTTGAGGCACAAGAACAGGAGGCCACCAAAAATTCATCTCGGTCGGAAGCAAATCAAAGAAATTTTCCGAGAACATGACATAGACGGTGATGGTTTTCTCAACATCAACGAGTTAACCAAAGCCTTCAGCTTTTTGGGTTCCATCCTCCCCTTCTATAAAGCTCACTACGGCTTGATTTATGCTGATGATGATGGCAATAATCTCATTTGCGAGGACGAACTTGACAAACTCATCGATTATGTCGAAAAAACCAATAAGAAGAATTGGAGTTAA
mRNA sequence
ATGGCCAGCCTTTCTCTTCTACTCCAAAGTCCACTGTCGGAGAAGGAAGCAGACCTTGTGCTCGAGCTGCGCGATGCCAACAGAGACGGCGTTCTTGATAAGAAGGAACTGATGTGTGATTTGAGGCACAAGAACAGGAGGCCACCAAAAATTCATCTCGGTCGGAAGCAAATCAAAGAAATTTTCCGAGAACATGACATAGACGGTGATGGTTTTCTCAACATCAACGAGTTAACCAAAGCCTTCAGCTTTTTGGGTTCCATCCTCCCCTTCTATAAAGCTCACTACGGCTTGATTTATGCTGATGATGATGGCAATAATCTCATTTGCGAGGACGAACTTGACAAACTCATCGATTATGTCGAAAAAACCAATAAGAAGAATTGGAGTTAA
Coding sequence (CDS)
ATGGCCAGCCTTTCTCTTCTACTCCAAAGTCCACTGTCGGAGAAGGAAGCAGACCTTGTGCTCGAGCTGCGCGATGCCAACAGAGACGGCGTTCTTGATAAGAAGGAACTGATGTGTGATTTGAGGCACAAGAACAGGAGGCCACCAAAAATTCATCTCGGTCGGAAGCAAATCAAAGAAATTTTCCGAGAACATGACATAGACGGTGATGGTTTTCTCAACATCAACGAGTTAACCAAAGCCTTCAGCTTTTTGGGTTCCATCCTCCCCTTCTATAAAGCTCACTACGGCTTGATTTATGCTGATGATGATGGCAATAATCTCATTTGCGAGGACGAACTTGACAAACTCATCGATTATGTCGAAAAAACCAATAAGAAGAATTGGAGTTAA
Protein sequence
MASLSLLLQSPLSEKEADLVLELRDANRDGVLDKKELMCDLRHKNRRPPKIHLGRKQIKEIFREHDIDGDGFLNINELTKAFSFLGSILPFYKAHYGLIYADDDGNNLICEDELDKLIDYVEKTNKKNWS
Homology
BLAST of Sgr028579 vs. NCBI nr
Match:
XP_023002890.1 (probable calcium-binding protein CML15 [Cucurbita maxima])
HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35
Identity = 83/127 (65.35%), Postives = 101/127 (79.53%), Query Frame = 0
Query: 1 MASLSLLLQSPLSEKEADLVLELRDANRDGVLDKKELMCDLRHKNRRPPKIHLGRKQIKE 60
M SL +LQ PLSEKEAD VL+LRD N+DGVL+KKELM DL RP K+ L R+QIKE
Sbjct: 1 MESLQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPSKLQLTREQIKE 60
Query: 61 IFREHDIDGDGFLNINELTKAFSFLGSILPFYKAHYGLIYADDDGNNLICEDELDKLIDY 120
IF EHDIDGDG L+++EL+KAF+F+GS L F+KA +G+ AD DG+ LI E+ELDKL+DY
Sbjct: 61 IFLEHDIDGDGCLSVSELSKAFNFMGSSLSFHKARHGMALADCDGDGLISEEELDKLVDY 120
Query: 121 VEKTNKK 128
EKTNKK
Sbjct: 121 FEKTNKK 122
BLAST of Sgr028579 vs. NCBI nr
Match:
XP_038885760.1 (probable calcium-binding protein CML36 [Benincasa hispida])
HSP 1 Score: 157.9 bits (398), Expect = 5.9e-35
Identity = 80/126 (63.49%), Postives = 98/126 (77.78%), Query Frame = 0
Query: 6 LLLQSPLSEKEADLVLELRDANRDGVLDKKELMCDLRHKNRRP----PKIHLGRKQIKEI 65
L LQ PLSEKEA+LVLE+RD N DGVLDK+ELM DL N +P P +HL R++I+EI
Sbjct: 6 LALQRPLSEKEANLVLEMRDINGDGVLDKQELMADLTQINVKPCTTLPNMHLTREEIREI 65
Query: 66 FREHDIDGDGFLNINELTKAFSFLGSILPFYKAHYGLIYADDDGNNLICEDELDKLIDYV 125
F DIDGDGFLN NELT+AF +GS P +KAHY +++ADDDG+ LI E EL+KLIDYV
Sbjct: 66 FTGFDIDGDGFLNKNELTQAFGMVGSYAPLFKAHYAMVHADDDGDGLISESELNKLIDYV 125
Query: 126 EKTNKK 128
EKTN++
Sbjct: 126 EKTNRR 131
BLAST of Sgr028579 vs. NCBI nr
Match:
XP_022951882.1 (probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023537876.1 probable calcium-binding protein CML15 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 157.1 bits (396), Expect = 1.0e-34
Identity = 81/127 (63.78%), Postives = 100/127 (78.74%), Query Frame = 0
Query: 1 MASLSLLLQSPLSEKEADLVLELRDANRDGVLDKKELMCDLRHKNRRPPKIHLGRKQIKE 60
M S+ +LQ PLSEKEAD VL+LRD N+DGVL+KKELM DL RP K+ L R++IKE
Sbjct: 1 MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPSKLQLTREEIKE 60
Query: 61 IFREHDIDGDGFLNINELTKAFSFLGSILPFYKAHYGLIYADDDGNNLICEDELDKLIDY 120
IF EHDIDGDG L++ E+TKAF+F+GS L F+KA +GL AD DG+ +I E+ELDKL+DY
Sbjct: 61 IFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEELDKLVDY 120
Query: 121 VEKTNKK 128
EKTNKK
Sbjct: 121 FEKTNKK 122
BLAST of Sgr028579 vs. NCBI nr
Match:
KAA0060891.1 (putative calcium-binding protein CML36 [Cucumis melo var. makuwa])
HSP 1 Score: 145.2 bits (365), Expect = 3.9e-31
Identity = 75/129 (58.14%), Postives = 96/129 (74.42%), Query Frame = 0
Query: 3 SLSLLLQSPLSEKEADLVLELRDANRDGVLDKKELMCDLRHKNRRP----PKIHLGRKQI 62
SL L LQ PLSEKEA+LVL++RDAN DG+LDK+ELM DL H N++P P + L R++I
Sbjct: 5 SLFLALQKPLSEKEANLVLKMRDANGDGILDKQELMTDLTHTNKKPSTNLPNMKLTREEI 64
Query: 63 KEIFREHDIDGDGFLNINELTKAFSFLGSILPFYKAHYGLIYADDDGNNLICEDELDKLI 122
KEIF DIDGDGFL+ NE+ +AF +GS P K HY + AD+DG+ LI E EL+KLI
Sbjct: 65 KEIFVGFDIDGDGFLSKNEVMQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNKLI 124
Query: 123 DYVEKTNKK 128
DYV++TN +
Sbjct: 125 DYVQRTNNR 133
BLAST of Sgr028579 vs. NCBI nr
Match:
XP_008445562.1 (PREDICTED: probable calcium-binding protein CML36 [Cucumis melo])
HSP 1 Score: 143.7 bits (361), Expect = 1.1e-30
Identity = 74/129 (57.36%), Postives = 95/129 (73.64%), Query Frame = 0
Query: 3 SLSLLLQSPLSEKEADLVLELRDANRDGVLDKKELMCDLRHKNRRP----PKIHLGRKQI 62
SL L LQ PLSEKEA+LV ++RDAN DG+LDK+ELM DL H N++P P + L R++I
Sbjct: 5 SLFLALQKPLSEKEANLVFKMRDANGDGILDKQELMTDLTHANKKPSTNLPNMKLTREEI 64
Query: 63 KEIFREHDIDGDGFLNINELTKAFSFLGSILPFYKAHYGLIYADDDGNNLICEDELDKLI 122
KEIF DIDGDGFL+ NE+ +AF +GS P K HY + AD+DG+ LI E EL+KLI
Sbjct: 65 KEIFVGFDIDGDGFLSKNEVMQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNKLI 124
Query: 123 DYVEKTNKK 128
DYV++TN +
Sbjct: 125 DYVQRTNNR 133
BLAST of Sgr028579 vs. ExPASy Swiss-Prot
Match:
P05933 (Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cam1 PE=1 SV=1)
HSP 1 Score: 47.4 bits (111), Expect = 1.5e-04
Identity = 30/110 (27.27%), Postives = 58/110 (52.73%), Query Frame = 0
Query: 9 QSPLSEKEADLVLELRDANRDGVLDKKELMCDLRHKNRRPPKIHLGRKQIKEIFREHDID 68
QSP + + D++ E+ DA+ +G +D E + + K + ++++E F+ D D
Sbjct: 43 QSPTAAELQDMINEV-DADGNGTIDFTEFLTMMARKMKDTD----NEEEVREAFKVFDKD 102
Query: 69 GDGFLNINELTKAFSFLGSILPFYKAHYGLIYADDDGNNLICEDELDKLI 119
G+G++ + ELT + LG L + + AD DG+ +I +E ++I
Sbjct: 103 GNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVI 147
BLAST of Sgr028579 vs. ExPASy Swiss-Prot
Match:
P62184 (Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2)
HSP 1 Score: 45.4 bits (106), Expect = 5.6e-04
Identity = 32/110 (29.09%), Postives = 55/110 (50.00%), Query Frame = 0
Query: 9 QSPLSEKEADLVLELRDANRDGVLDKKELMCDLRHKNRRPPKIHLGRKQIKEIFREHDID 68
Q+P + D++ E+ DA+ DG +D E + + K + ++I+E FR D D
Sbjct: 42 QNPTEAELQDMINEV-DADGDGTIDFPEFLTMMARKMKDTD----SEEEIREAFRVFDKD 101
Query: 69 GDGFLNINELTKAFSFLGSILPFYKAHYGLIYADDDGNNLICEDELDKLI 119
GDGF++ EL + LG L + + AD DG+ + +E K++
Sbjct: 102 GDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMM 146
BLAST of Sgr028579 vs. ExPASy TrEMBL
Match:
A0A6J1KQ84 (probable calcium-binding protein CML15 OS=Cucurbita maxima OX=3661 GN=LOC111496628 PE=4 SV=1)
HSP 1 Score: 159.5 bits (402), Expect = 9.7e-36
Identity = 83/127 (65.35%), Postives = 101/127 (79.53%), Query Frame = 0
Query: 1 MASLSLLLQSPLSEKEADLVLELRDANRDGVLDKKELMCDLRHKNRRPPKIHLGRKQIKE 60
M SL +LQ PLSEKEAD VL+LRD N+DGVL+KKELM DL RP K+ L R+QIKE
Sbjct: 1 MESLQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPSKLQLTREQIKE 60
Query: 61 IFREHDIDGDGFLNINELTKAFSFLGSILPFYKAHYGLIYADDDGNNLICEDELDKLIDY 120
IF EHDIDGDG L+++EL+KAF+F+GS L F+KA +G+ AD DG+ LI E+ELDKL+DY
Sbjct: 61 IFLEHDIDGDGCLSVSELSKAFNFMGSSLSFHKARHGMALADCDGDGLISEEELDKLVDY 120
Query: 121 VEKTNKK 128
EKTNKK
Sbjct: 121 FEKTNKK 122
BLAST of Sgr028579 vs. ExPASy TrEMBL
Match:
A0A6J1GIW2 (probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC111454618 PE=4 SV=1)
HSP 1 Score: 157.1 bits (396), Expect = 4.8e-35
Identity = 81/127 (63.78%), Postives = 100/127 (78.74%), Query Frame = 0
Query: 1 MASLSLLLQSPLSEKEADLVLELRDANRDGVLDKKELMCDLRHKNRRPPKIHLGRKQIKE 60
M S+ +LQ PLSEKEAD VL+LRD N+DGVL+KKELM DL RP K+ L R++IKE
Sbjct: 1 MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPSKLQLTREEIKE 60
Query: 61 IFREHDIDGDGFLNINELTKAFSFLGSILPFYKAHYGLIYADDDGNNLICEDELDKLIDY 120
IF EHDIDGDG L++ E+TKAF+F+GS L F+KA +GL AD DG+ +I E+ELDKL+DY
Sbjct: 61 IFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEELDKLVDY 120
Query: 121 VEKTNKK 128
EKTNKK
Sbjct: 121 FEKTNKK 122
BLAST of Sgr028579 vs. ExPASy TrEMBL
Match:
A0A5A7V530 (Putative calcium-binding protein CML36 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00240 PE=4 SV=1)
HSP 1 Score: 145.2 bits (365), Expect = 1.9e-31
Identity = 75/129 (58.14%), Postives = 96/129 (74.42%), Query Frame = 0
Query: 3 SLSLLLQSPLSEKEADLVLELRDANRDGVLDKKELMCDLRHKNRRP----PKIHLGRKQI 62
SL L LQ PLSEKEA+LVL++RDAN DG+LDK+ELM DL H N++P P + L R++I
Sbjct: 5 SLFLALQKPLSEKEANLVLKMRDANGDGILDKQELMTDLTHTNKKPSTNLPNMKLTREEI 64
Query: 63 KEIFREHDIDGDGFLNINELTKAFSFLGSILPFYKAHYGLIYADDDGNNLICEDELDKLI 122
KEIF DIDGDGFL+ NE+ +AF +GS P K HY + AD+DG+ LI E EL+KLI
Sbjct: 65 KEIFVGFDIDGDGFLSKNEVMQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNKLI 124
Query: 123 DYVEKTNKK 128
DYV++TN +
Sbjct: 125 DYVQRTNNR 133
BLAST of Sgr028579 vs. ExPASy TrEMBL
Match:
A0A1S3BD12 (probable calcium-binding protein CML36 OS=Cucumis melo OX=3656 GN=LOC103488542 PE=4 SV=1)
HSP 1 Score: 143.7 bits (361), Expect = 5.5e-31
Identity = 74/129 (57.36%), Postives = 95/129 (73.64%), Query Frame = 0
Query: 3 SLSLLLQSPLSEKEADLVLELRDANRDGVLDKKELMCDLRHKNRRP----PKIHLGRKQI 62
SL L LQ PLSEKEA+LV ++RDAN DG+LDK+ELM DL H N++P P + L R++I
Sbjct: 5 SLFLALQKPLSEKEANLVFKMRDANGDGILDKQELMTDLTHANKKPSTNLPNMKLTREEI 64
Query: 63 KEIFREHDIDGDGFLNINELTKAFSFLGSILPFYKAHYGLIYADDDGNNLICEDELDKLI 122
KEIF DIDGDGFL+ NE+ +AF +GS P K HY + AD+DG+ LI E EL+KLI
Sbjct: 65 KEIFVGFDIDGDGFLSKNEVMQAFGMMGSYSPLLKTHYAMACADEDGDGLISECELNKLI 124
Query: 123 DYVEKTNKK 128
DYV++TN +
Sbjct: 125 DYVQRTNNR 133
BLAST of Sgr028579 vs. ExPASy TrEMBL
Match:
A0A0A0LP46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358880 PE=4 SV=1)
HSP 1 Score: 139.0 bits (349), Expect = 1.4e-29
Identity = 73/126 (57.94%), Postives = 93/126 (73.81%), Query Frame = 0
Query: 3 SLSLLLQSPLSEKEADLVLELRDANRDGVLDKKELMCDLRHKNRRP----PKIHLGRKQI 62
SL + LQ PLSEKEA+L+LE+RDAN DGVLDK+ELM DL H N++P + L R++I
Sbjct: 5 SLFVALQKPLSEKEANLLLEMRDANGDGVLDKQELMADLTHTNKKPSTSLQDMKLTREEI 64
Query: 63 KEIFREHDIDGDGFLNINELTKAFSFLGSILPFYKAHYGLIYADDDGNNLICEDELDKLI 122
KEIF DIDGDGFL+ NE+ +AF +GS P KAHY + AD+DG+ I E EL+KLI
Sbjct: 65 KEIFVGFDIDGDGFLSKNEVIQAFGMMGSCSPIMKAHYAMACADEDGDGRISEPELNKLI 124
Query: 123 DYVEKT 125
DYV++T
Sbjct: 125 DYVQRT 130
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023002890.1 | 2.0e-35 | 65.35 | probable calcium-binding protein CML15 [Cucurbita maxima] | [more] |
XP_038885760.1 | 5.9e-35 | 63.49 | probable calcium-binding protein CML36 [Benincasa hispida] | [more] |
XP_022951882.1 | 1.0e-34 | 63.78 | probable calcium-binding protein CML15 [Cucurbita moschata] >XP_023537876.1 prob... | [more] |
KAA0060891.1 | 3.9e-31 | 58.14 | putative calcium-binding protein CML36 [Cucumis melo var. makuwa] | [more] |
XP_008445562.1 | 1.1e-30 | 57.36 | PREDICTED: probable calcium-binding protein CML36 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
P05933 | 1.5e-04 | 27.27 | Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=c... | [more] |
P62184 | 5.6e-04 | 29.09 | Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KQ84 | 9.7e-36 | 65.35 | probable calcium-binding protein CML15 OS=Cucurbita maxima OX=3661 GN=LOC1114966... | [more] |
A0A6J1GIW2 | 4.8e-35 | 63.78 | probable calcium-binding protein CML15 OS=Cucurbita moschata OX=3662 GN=LOC11145... | [more] |
A0A5A7V530 | 1.9e-31 | 58.14 | Putative calcium-binding protein CML36 OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A1S3BD12 | 5.5e-31 | 57.36 | probable calcium-binding protein CML36 OS=Cucumis melo OX=3656 GN=LOC103488542 P... | [more] |
A0A0A0LP46 | 1.4e-29 | 57.94 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358880 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |