Sgr027929 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr027929
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Transcription initiation factor IIA subunit 2
Location	tig00153056: 1548314 .. 1550593 (-)
RNA-Seq Expression	Sgr027929
Synteny	Sgr027929

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCGCGAGAGAGAGAGCGTCGCCGCCGACGAGAGCAATAGTGAGATTGCTGTGCTCTTCGCGGTACTGCTTCTTCTTCGTACTTGCTGGCGGGAAAGGTCGCTTTAAAAACTCTGGTCAAATCTTTGACTTTTTGACTTGATACCTTTTCTTTATTGGGCCCGATCGGAAGAGGGTTTTAATGGGCTCGCGAACAAAATCCAAGACAGGTTTCAGGGCCCACTTAACTGTAAAGCCCAAAATAAAGAACAAAGTCGCCAGGGACTAATTCGTCATTTTGTTGAGTCTCTATTCCGTCGCTTCGCTGCTATATATACCCTCATCTACAAAATCTAGGGTATAAAAGCCCCAAATTTCTTCGCTCGCGAAAAGCTTTGGAGCTAACGTTAACCCAGTTAGAATCAGAAACCAGAAGCATCACAAACTCTCCACCAATCTGTAGCTTCATTGCCATCCTTGTACTCTCTTTGTTTTTTTTTTTCCCCTTTCCTTTTCGAATTGATATCTCGCTTTAATTTCGAAGGTTTTGCCAGCTTTGTTGAATTCTGATGCTATGTTCCAAAATTTTCTTTAGTTTTGTCAATTCCGGATGCGTGTTTTTGAACTAATTTTGATATCTTAGCCAAAGAACTTCCATTTATAGCAGATCTTGTATTTCGAAGAAGAATGGCAACGTTTGAACTGTACCGCAGATCGACGATCGGAATGTGTTTGACTGAAACTTTGGACGAAATGGTTCAGAACGGTACTCTTAGTCCTGAGCTTGCTATTCAGGTTCTTGTCCAGTTCGATAAGGTACAGTCAAACCTGGTTTGGATCTGTGTTTATGTATATATTTTGGATTTGTGTTCAGAATTACAAGGTCTTGATTGATTCAATTTTCTACCGCTTTTGGCTTTTGGCTTTTGCAGTCTATGACTGAGGCTCTGGAATCACAGGTGAAAAGCAAGGTGTCTATCAAGGTATCTTTGTCCGGCTTATGTATTCGACGTATCTTTGATTGCCCAAGGTTTATGTCGCCGGATAATGTCAATATTATAAACTTTTCATCAAAAATATATTATTAACTTGAAACGTGTTTTTACTGGTAAGAGGAATTGGTTGTTTTGCTTGCCTGTTTTGAGAATGCTTTGTTGTGCTCAAGTGCTCGTATTAGTAATCTGGAGCCAAATTCTTTTGTAAGCAACACATTTATACGTTAAATGCAAAGCAGAATATTTTCCCCCGGTCTTTTGGTTGCCCCGAAGTTTGTGCTGAACCGTGATAAAGAAAACATACAATGTACAGCTTCAGAACATTTGTTTTTGGAAGTTGGAAGTTTCACTTGCCCTTTTGATCTGCTAAATAGATTAGATTTGTTGTCTTCTTTCTTTTCTTTGTTTTATTAATTGATTCTTGAAATGTTTTCTAGTATTAGATGTTTTATCTTGAATAGGTTTCTCTGGAATAATCGTTGGTATAAATTCATTTCTACAATGAGTCTTAATGTTAAATCGAAATTCCCGTAATCTCTATTTCAAGTTATATGTTCGGTCCAAGGGCTGTCGGATTTTCCAATGTTATACCGGTTGACTGAAGTCCATTGTACATAGATTGTATGAGAATTATGATTTTTTTGAAAAAAAATGATGAAATTACAATCACACAGCAAGATTTAAGGAGTTATGTAGTTGATAATATGTGGTTGTGCTATGTTCTTACATTTATTTTTCTATTCAACTCAGCATATGTCAATAAGCTTGGCATTGTTTGAAGTCTTCCAGCCATCCCTTCTGACTCTTTCTTTGAGAAGACTAATCTGTTTGTTTTTTACCTTACACATTTTGCCAAGTGAATGTCACAAAGCCCCGCAAGCACGTATTTTGTGGTGATATCTGAACCACCGTCGTATTCCTGCTGTTTTGCAACAGGGACATTTGCACACCTACCGGTTCTGCGACAACGTTTGGACCTTCATTTTGCAGGATGCAACATTTAAGAACGAGGATTCCCAAGAGACTGTTGGCAGAATTAAAATAGTGGCTTGTGACTCGAAGTTACTCACACAATGAGCTTTCAACATCAGTTGTTATAGATGAAATTTGCATAATTATTTGCTGATGATAGAAGGAAATAGTCGTGGGGAAGAAATGGCCATCACAAGTCATTGTTTGCAAGTTGCAAGTTGCAAGTTGGAAAGAAGGATCCAAACGTGATTCTGTAAAGTCATCGACCTTGAACAGCAGAAAGTTACTTTCACGCACATTGACGTTACATTTGACTGTAATTGCCTTCTAA

mRNA sequence

ATGGAGCGCGAGAGAGAGAGCGTCGCCGCCGACGAGAGCAATAGTGAGATTGCTGTGCTCTTCGCGAACGGTACTCTTAGTCCTGAGCTTGCTATTCAGGTTCTTGTCCAGTTCGATAAGTCTATGACTGAGGCTCTGGAATCACAGGTGAAAAGCAAGGTGTCTATCAAGGGACATTTGCACACCTACCGGTTCTGCGACAACGTTTGGACCTTCATTTTGCAGGATGCAACATTTAAGAACGAGGATTCCCAAGAGACTGTTGGCAGAATTAAAATAAAGGAAATAGTCGTGGGGAAGAAATGGCCATCACAAGTCATTGTTTGCAAGTTGCAAGTTGCAAGTTGGAAAGAAGGATCCAAACGTGATTCTGTAAAGTCATCGACCTTGAACAGCAGAAAGTTACTTTCACGCACATTGACGTTACATTTGACTGTAATTGCCTTCTAA

Coding sequence (CDS)

ATGGAGCGCGAGAGAGAGAGCGTCGCCGCCGACGAGAGCAATAGTGAGATTGCTGTGCTCTTCGCGAACGGTACTCTTAGTCCTGAGCTTGCTATTCAGGTTCTTGTCCAGTTCGATAAGTCTATGACTGAGGCTCTGGAATCACAGGTGAAAAGCAAGGTGTCTATCAAGGGACATTTGCACACCTACCGGTTCTGCGACAACGTTTGGACCTTCATTTTGCAGGATGCAACATTTAAGAACGAGGATTCCCAAGAGACTGTTGGCAGAATTAAAATAAAGGAAATAGTCGTGGGGAAGAAATGGCCATCACAAGTCATTGTTTGCAAGTTGCAAGTTGCAAGTTGGAAAGAAGGATCCAAACGTGATTCTGTAAAGTCATCGACCTTGAACAGCAGAAAGTTACTTTCACGCACATTGACGTTACATTTGACTGTAATTGCCTTCTAA

Protein sequence

MERERESVAADESNSEIAVLFANGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNEDSQETVGRIKIKEIVVGKKWPSQVIVCKLQVASWKEGSKRDSVKSSTLNSRKLLSRTLTLHLTVIAF

Homology

[Close]

BLAST of Sgr027929 vs. NCBI nr
Match: XP_022936677.1 (transcription initiation factor IIA subunit 2 [Cucurbita moschata] >XP_022936678.1 transcription initiation factor IIA subunit 2 [Cucurbita moschata] >XP_022975864.1 transcription initiation factor IIA subunit 2 [Cucurbita maxima] >XP_023536591.1 transcription initiation factor IIA subunit 2 [Cucurbita pepo subsp. pepo] >XP_023536592.1 transcription initiation factor IIA subunit 2 [Cucurbita pepo subsp. pepo] >KAG7024584.1 Transcription initiation factor IIA subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 23 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 82
          NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE
Sbjct: 26 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 85

Query: 83 DSQETVGRIKI 94
          DSQETVGRIKI
Sbjct: 86 DSQETVGRIKI 96

[Close]

BLAST of Sgr027929 vs. NCBI nr
Match: KAG6591702.1 (UDP-glycosyltransferase 91C1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 23  NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 82
           NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE
Sbjct: 649 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 708

Query: 83  DSQETVGRIKI 94
           DSQETVGRIKI
Sbjct: 709 DSQETVGRIKI 719

[Close]

BLAST of Sgr027929 vs. NCBI nr
Match: XP_022941425.1 (transcription initiation factor IIA subunit 2-like [Cucurbita moschata] >XP_022981079.1 transcription initiation factor IIA subunit 2-like [Cucurbita maxima] >XP_023525811.1 transcription initiation factor IIA subunit 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-30
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 23 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 82
          NGTLSPELAIQVLVQFDKSMTEALESQVKSKV+IKGHLHTYRFCDNVWTFILQDATFKNE
Sbjct: 26 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQDATFKNE 85

Query: 83 DSQETVGRIKI 94
          DSQETVGRIKI
Sbjct: 86 DSQETVGRIKI 96

[Close]

BLAST of Sgr027929 vs. NCBI nr
Match: KAG6608125.1 (Transcription initiation factor IIA subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-30
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 23  NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 82
           NGTLSPELAIQVLVQFDKSMTEALESQVKSKV+IKGHLHTYRFCDNVWTFILQDATFKNE
Sbjct: 642 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQDATFKNE 701

Query: 83  DSQETVGRIKI 94
           DSQETVGRIKI
Sbjct: 702 DSQETVGRIKI 712

[Close]

BLAST of Sgr027929 vs. NCBI nr
Match: KAG7031763.1 (Transcription initiation factor IIA subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142.5 bits (358), Expect = 2.9e-30
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 23 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 82
          NGTLSPELAIQVLVQFDKSMTEALESQVKSKV++KGHLHTYRFCDNVWTFILQDATFKNE
Sbjct: 26 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVTVKGHLHTYRFCDNVWTFILQDATFKNE 85

Query: 83 DSQETVGRIKI 94
          DSQETVGRIKI
Sbjct: 86 DSQETVGRIKI 96

[Close]

BLAST of Sgr027929 vs. ExPASy Swiss-Prot
Match: Q39236 (Transcription initiation factor IIA subunit 2 OS=Arabidopsis thaliana OX=3702 GN=TFIIA-S PE=3 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 4.4e-29
Identity = 62/71 (87.32%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 23 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 82
          +GTLSPELAIQVLVQFDKSMTEALESQVK+KVSIKGHLHTYRFCDNVWTFILQDA FK++
Sbjct: 26 SGTLSPELAIQVLVQFDKSMTEALESQVKTKVSIKGHLHTYRFCDNVWTFILQDAMFKSD 85

Query: 83 DSQETVGRIKI 94
          D QE V R+KI
Sbjct: 86 DRQENVSRVKI 96

[Close]

BLAST of Sgr027929 vs. ExPASy Swiss-Prot
Match: A2XZI2 (Transcription initiation factor IIA subunit 2 OS=Oryza sativa subsp. indica OX=39946 GN=TFIIAy PE=3 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 9.8e-29
Identity = 60/74 (81.08%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 20 LFANGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATF 79
          + ++GTLSPELAIQVLVQFDKSMTEALE+QVKSKVSIKGHLHTYRFCDNVWTFIL +A+F
Sbjct: 23 MVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIKGHLHTYRFCDNVWTFILTEASF 82

Query: 80 KNEDSQETVGRIKI 94
          KNE++ E VG++KI
Sbjct: 83 KNEETTEQVGKVKI 96

[Close]

BLAST of Sgr027929 vs. ExPASy Swiss-Prot
Match: Q0DLD3 (Transcription initiation factor IIA subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TFIIAy PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 9.8e-29
Identity = 60/74 (81.08%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 20 LFANGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATF 79
          + ++GTLSPELAIQVLVQFDKSMTEALE+QVKSKVSIKGHLHTYRFCDNVWTFIL +A+F
Sbjct: 23 MVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIKGHLHTYRFCDNVWTFILTEASF 82

Query: 80 KNEDSQETVGRIKI 94
          KNE++ E VG++KI
Sbjct: 83 KNEETTEQVGKVKI 96

[Close]

BLAST of Sgr027929 vs. ExPASy Swiss-Prot
Match: O74948 (Transcription initiation factor IIA subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=toa2 PE=3 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-16
Identity = 38/74 (51.35%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 20 LFANGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATF 79
          L + G +SP+LA++VL  FDKSMTEAL  +V+S+++ KGHL TYRFCD VWTFI+++ +F
Sbjct: 24 LISQGKISPQLAMKVLFNFDKSMTEALAEKVRSRLTFKGHLDTYRFCDEVWTFIIKNPSF 83

Query: 80 KNEDSQETVGRIKI 94
          + ++   T  +I+I
Sbjct: 84 RFDNETVTSNKIRI 97

[Close]

BLAST of Sgr027929 vs. ExPASy Swiss-Prot
Match: P0CR85 (Transcription initiation factor IIA subunit 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=TOA2 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-15
Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 0


Query: 20  LFANGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATF 79
           L   G + P+LA++VL QFDKS+TE L+  VK+K +IKGHL TYR CD+VWTF+++D  F
Sbjct: 30  LITQGDIPPQLAMRVLQQFDKSLTECLQKGVKNKTTIKGHLSTYRLCDDVWTFVVKDPQF 89

Query: 80  KNEDSQETVGRIKIKEIVVGKKWPSQVIVCK 111
           K E      G     E+V G K   +++ CK
Sbjct: 90  KME------GVGAGSEMVTGSK--IKIVACK 112

[Close]

BLAST of Sgr027929 vs. ExPASy TrEMBL
Match: A0A6J1F935 (Transcription initiation factor IIA subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111443199 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 4.9e-31
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 23 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 82
          NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE
Sbjct: 26 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 85

Query: 83 DSQETVGRIKI 94
          DSQETVGRIKI
Sbjct: 86 DSQETVGRIKI 96

[Close]

BLAST of Sgr027929 vs. ExPASy TrEMBL
Match: A0A6J1ILT9 (Transcription initiation factor IIA subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111476437 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 4.9e-31
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 23 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 82
          NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE
Sbjct: 26 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 85

Query: 83 DSQETVGRIKI 94
          DSQETVGRIKI
Sbjct: 86 DSQETVGRIKI 96

[Close]

BLAST of Sgr027929 vs. ExPASy TrEMBL
Match: A0A6J1J100 (Transcription initiation factor IIA subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111480333 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 23 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 82
          NGTLSPELAIQVLVQFDKSMTEALESQVKSKV+IKGHLHTYRFCDNVWTFILQDATFKNE
Sbjct: 26 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQDATFKNE 85

Query: 83 DSQETVGRIKI 94
          DSQETVGRIKI
Sbjct: 86 DSQETVGRIKI 96

[Close]

BLAST of Sgr027929 vs. ExPASy TrEMBL
Match: A0A6J1FTM1 (Transcription initiation factor IIA subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111446721 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 23 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 82
          NGTLSPELAIQVLVQFDKSMTEALESQVKSKV+IKGHLHTYRFCDNVWTFILQDATFKNE
Sbjct: 26 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIKGHLHTYRFCDNVWTFILQDATFKNE 85

Query: 83 DSQETVGRIKI 94
          DSQETVGRIKI
Sbjct: 86 DSQETVGRIKI 96

[Close]

BLAST of Sgr027929 vs. ExPASy TrEMBL
Match: A0A6J1BWA2 (Transcription initiation factor IIA subunit 2 OS=Momordica charantia OX=3673 GN=LOC111006284 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.8e-30
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 23 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 82
          NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE
Sbjct: 26 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 85

Query: 83 DSQETVGRIKI 94
          DSQE VGRIKI
Sbjct: 86 DSQENVGRIKI 96

[Close]

BLAST of Sgr027929 vs. TAIR 10
Match: AT4G24440.1 (transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) )

HSP 1 Score: 129.0 bits (323), Expect = 3.1e-30
Identity = 62/71 (87.32%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 23 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 82
          +GTLSPELAIQVLVQFDKSMTEALESQVK+KVSIKGHLHTYRFCDNVWTFILQDA FK++
Sbjct: 26 SGTLSPELAIQVLVQFDKSMTEALESQVKTKVSIKGHLHTYRFCDNVWTFILQDAMFKSD 85

Query: 83 DSQETVGRIKI 94
          D QE V R+KI
Sbjct: 86 DRQENVSRVKI 96

[Close]

BLAST of Sgr027929 vs. TAIR 10
Match: AT4G24440.2 (transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) )

HSP 1 Score: 129.0 bits (323), Expect = 3.1e-30
Identity = 62/71 (87.32%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 23 NGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIKGHLHTYRFCDNVWTFILQDATFKNE 82
          +GTLSPELAIQVLVQFDKSMTEALESQVK+KVSIKGHLHTYRFCDNVWTFILQDA FK++
Sbjct: 26 SGTLSPELAIQVLVQFDKSMTEALESQVKTKVSIKGHLHTYRFCDNVWTFILQDAMFKSD 85

Query: 83 DSQETVGRIKI 94
          D QE V R+KI
Sbjct: 86 DRQENVSRVKI 96

The following BLAST results are available for this feature:

BLAST of Sgr027929 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936677.1	1.0e-30	100.00	transcription initiation factor IIA subunit 2 [Cucurbita moschata] >XP_022936678...	[more]
KAG6591702.1	1.0e-30	100.00	UDP-glycosyltransferase 91C1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022941425.1	2.2e-30	98.59	transcription initiation factor IIA subunit 2-like [Cucurbita moschata] >XP_0229...	[more]
KAG6608125.1	2.2e-30	98.59	Transcription initiation factor IIA subunit 2, partial [Cucurbita argyrosperma s...	[more]
KAG7031763.1	2.9e-30	97.18	Transcription initiation factor IIA subunit 2 [Cucurbita argyrosperma subsp. arg...	[more]

BLAST of Sgr027929 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39236	4.4e-29	87.32	Transcription initiation factor IIA subunit 2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
A2XZI2	9.8e-29	81.08	Transcription initiation factor IIA subunit 2 OS=Oryza sativa subsp. indica OX=3...	[more]
Q0DLD3	9.8e-29	81.08	Transcription initiation factor IIA subunit 2 OS=Oryza sativa subsp. japonica OX...	[more]
O74948	1.9e-16	51.35	Transcription initiation factor IIA subunit 2 OS=Schizosaccharomyces pombe (stra...	[more]
P0CR85	4.7e-15	47.25	Transcription initiation factor IIA subunit 2 OS=Cryptococcus neoformans var. ne...	[more]

BLAST of Sgr027929 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F935	4.9e-31	100.00	Transcription initiation factor IIA subunit 2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1ILT9	4.9e-31	100.00	Transcription initiation factor IIA subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1J100	1.1e-30	98.59	Transcription initiation factor IIA subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FTM1	1.1e-30	98.59	Transcription initiation factor IIA subunit 2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1BWA2	1.8e-30	98.59	Transcription initiation factor IIA subunit 2 OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of Sgr027929 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24440.1	3.1e-30	87.32	transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S)	[more]
AT4G24440.2	3.1e-30	87.32	transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S)	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015871	Transcription initiation factor IIA, gamma subunit, C-terminal	PFAM	PF02751	TFIIA_gamma_C	coord: 57..93 e-value: 1.1E-16 score: 60.7
IPR015871	Transcription initiation factor IIA, gamma subunit, C-terminal	CDD	cd10014	TFIIA_gamma_C	coord: 54..93 e-value: 1.04364E-17 score: 69.9691
IPR009083	Transcription factor IIA, alpha-helical domain	GENE3D	1.10.287.190		coord: 17..51 e-value: 5.6E-8 score: 34.6
IPR009088	Transcription factor IIA, beta-barrel	GENE3D	2.30.18.10		coord: 52..101 e-value: 1.7E-17 score: 64.9
IPR009088	Transcription factor IIA, beta-barrel	SUPERFAMILY	50784	Transcription factor IIA (TFIIA), beta-barrel domain	coord: 49..93
None	No IPR available	PANTHER	PTHR10966:SF6	TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2	coord: 18..94
None	No IPR available	SUPERFAMILY	47396	Transcription factor IIA (TFIIA), alpha-helical domain	coord: 19..51
IPR003194	Transcription initiation factor IIA, gamma subunit	PANTHER	PTHR10966	TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2	coord: 18..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr027929.1	Sgr027929.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051123	RNA polymerase II preinitiation complex assembly
biological_process	GO:0006413	translational initiation
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
cellular_component	GO:0005672	transcription factor TFIIA complex
molecular_function	GO:0016251	RNA polymerase II general transcription initiation factor activity
molecular_function	GO:0017025	TBP-class protein binding
molecular_function	GO:0003743	translation initiation factor activity