Sgr027303 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr027303
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	DNA-directed RNA polymerase III subunit rpc4
Location	tig00153048: 2922117 .. 2927247 (-)
RNA-Seq Expression	Sgr027303
Synteny	Sgr027303

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAAGATCCTCCCAAGAACAATACAGCTGCCCAAAGGAAGGTCTGTTTTGGCTTTTCCATCTGCTATTTGTTTCAAGAGTTTTAAATTTTTATTTTGATCTGATGGAATAGACTGCTGCAGATGAAATTTGCTCCAAAAGCACCTCCTCGTCGTATACCAAAACCTGAAGTGAAAGCGTATGGGCATCATTTTCGAATTCAGTAGCACCTCCAATTATTTCGATTTTCTGCTGCAGTCAAAATGTCTGATTGTTTTATGTAGAGAAATTGCGGAGGATGCCGACGCAGCTCAGGCCAGGGATTTGCTAAAGCGCTTCAATGTATATCTGCTTTCATTTTTTTTCTGTTGCGTACATTCTTGAGCATATAGAATATCTAGTTTTAATATATCCTTGCTCTCTTTTTGTCACTTTAATTTCTTGATGTCTTATTGCAGGAAAGTACCATGAGGGCAAAGCAAAAAGTTGGAAAAAAAGGCCAGTTCCATAAACTAGTCATGTTCATGGTTAATTTTTGTTCTGATCTCGAGCTTCATGATTTTACTTTAGTAGATAATATTAAAATTTATCTTTTAATCTTTTGAATGCTTTAGATTAGATCTGAAAGTTTTTATTTGTATGGTATGCTAGTTCCTGATCTCGCTTCTTTTAATCATTTTATGGTCATAGTTGGCTATCAATTTTGTATTTCCTTTTTCATTTATTAGTCATGATATACGAATTTGTTCTTAGGATTAAGTTACATATGCAGGTTTTGTGTACCTATGTATTTATCTATTTGTATGTGTGTAATTAGAATAATGTCTGAAGATCTTATATCTCATGTAATTTTATAATAAGATCCTTCTTAAGAACAGAGATGTATAAGATCACATAAATGTTTTAAGAAGAATTTGAGGGAAATTTTTAAATCATGAAAAATTGATGGAGAAAAAAAAAACATATTATGCCATACTTTAATTGACATTAGAACCATGAACGTGGACCAAAGTCAGTTTTAAATTAGGAAATTTCTACCATTTGTGAAGTCAAAAAGACCATATATGTTAAATTTACTAGACATATCGCGAGTTTAATAATGAAATTGTTGATTTATCTGTGGAGTTATGATGATATGATTCAACATATTACTTCTGTATCATGTGTCTTGCCCCAACCATACTGCCTAGCATTTCAGGGAAAAGGGGTGAACTTCTGTCAGTTACTAAACCCTACATACCATTGAAATCTACTTGCACAATGATTAAATATATGTGTAAGCTCTTTTAACATGTATCCGTTTCATTTATGTGCCCGTCATTTATATATGCAGTGGCACCTACACAAGTTGCATTTGGTTCTGGAGGTACGTCAACCTCCATAAGATCATTCGGTATTCCAAAATCTGGAAATAGTAGTACCAGACGTGAAGGTTGGCTACTAAACTACTAAAATCTATGCTACTCAAGATGTAATTGCTTGATATGCTGCTTCTAATGAACTAAACTGAAAGGTGATTATGCAGATGGAACTCTTCCGTCTAGTACAAGCAAGGAGTATGTAGAACCATGGGTCAGTAAAACATACAAATCCTCAATTATTTTCCCCTGTATTCCTATTTACATCTGCCTTCTCCCTTAGTATGTCAATGTAGTTATTCAAATTGCATTTTACTTCAGGATTATTACAGTTATTATCCTGTAACTCTTCCTTTGCGGAGACCATATTCAGGAAATCCAGGTATCTCTGTAAGTTCATCTTATTTACAAAAAAATAAAAAGAAAATACTGCAATGGACAACTGGATTATCCTGAACTGCACTTACCATATCTCTATGTGTGTGGCTTTGAATACTTCATATCAGTTTGGAGTACAGTTTTCACGGTGAACCCATGAAAACTGTACCTACTGCTTCTTCTGCATCAATTGTCTGCTCTAAGTTTTATGCATTACTTCATAGATTGTCTTAACGAGGAAGAATTTGGAGAGGCTTCAGAAACCATAACATATGATGAAAATACAACAACTCCAGCAATGGATCTTGGTCTAATGGTTAGTCATTGGATTATGGGGATTTCATAGTGTGACCCTCTATTTCCAATTTTACGCTTAATGATTGATTGGCAGGAGGAGAATCCAGAAACAAACATCTTTTTTCTTCAATTACCACCCATGGTGCCTGTGATAAAGCAATCTTCTACTGTAGTAGGCATGGAGGCAGCCGACAGCTTGGAACAAAGTAAGGGTTCACAACCTCGACAGAACTCCTGCACTTTGGATGGGTTACCTTCTGGCTCCATGGGTAAATTGCTTGTATACAGGAGTGGTGCTGTCAAGTTGAAGATTGGCGATATTGCATATGACGTGAGTTTTTTTTTTATTATAAACTTGAGCATGCCAAGTTCCTCATTATCTACTTGTTTATCAACTCGATAGATCTTCCAAGATAAAAGATTAGAATGGAATCTCTTCCTCAGCTTTCTGAAATTTTTCATTTGATGACAAAATTGCATTTATAGGAAGTTCTTATTGATTGATGGGTTATTATTAGACAAAATCTTTTGGGATTTTGCGTTCCTTTTCACATCCATTTTAAAATACGGGCAGGTTTCTTCTGGAATGGATTGTGGCTTTGCACAAGATGTTGCAGCTATCAACGTGGAAGGGAAGCATTGCTGCATTGTTGGAGAGCTTAGCAAGCGTGTGATTTTAACGCCAGATGTGGACTCAATCTTAAAAAATGTCGAGGATTTATGATTATTTTCTCTCAAGACAGGATTTTTTCATAGACATCAATGTAGAGAAATTGACGGGAATGATATTCTTTATGAAAGCCACGAGAGGATATAACAATAAAAGATAGCAGCAGAAAGAGATGCACTGGTTCAGGAAAAACAGAAGAGTGACTTTTTTAACCCTCTTGTTTAGCCGAGTGCCTATATTTTTTCAATTATGAACAATCTGTCGTGTGAGTAAGTAGATCAATTATATTAATTACAATTTTGACAAGAGTAATGAATCTCATTCTACTGAAGTCTCTAGTTAATTCTCCATTTTAATGCATATTGGAATATATCTTGAGCATAATATGCAACTGGTACCTTAGTAAGCATTCATTGTCAATATAATGCAAATGTAAACTGATGCGAGTGAGATCTACAAAATAGGTTGCATTCTTATCTTTCTATTTGTTCTGCTGTCTAGTTACCTCACCCTCTCTGCTAACCCAGAAATAATGCAAGCCTTGGTTCCTTTCAGGTAGAGAGAGAGGTAAAGGTACTCTAAAAGGCATTCTTAATTTGTTGACATAGGTGATGCTTGTAGATGATTAACTGTAGCCACTAAAAATTTTCTCTTTTCACGATTATTGATTAAAAATAGCACTTACAGTGAAATCATTTATGACTACCTATAGATTCTTATCAGTTCCTACAGGGAAAAAAGTTCAGTACAAGATTAGGTAATCTGCACAGATCTTTCAGGAAAAAAAATGCTCATTATTTCTTAGGAAAAGTACTTCTGATTGTGAAATGTCAAACACTTTTTTCCACCTCTCAAAGGTGGTACTCCATTTGCATGCAACCTACAGTTGGTGAAGTGTCAGCTGGGCTCCATGTTGTGGTTGAAGAGTCATGACAGTATGGGGAGCATGTGCATAAGAAGGAGAAAGCTCAAAAGAGAAATTTTGTAGAATCATGGCCAATGCAACCTTAGCTTCTAACATAGCAAAGTTTTGTCCAATGCAGGTCTTTGGTCCCCAGCCAAAGGGAAAGAATGCCAACTGATCTTTGCTTGCCTTTGAAACTCCTGCAGAAAATCTCTCTGGTTTGAATTGGTCTGCATCTTCTCCCCAGTACTCAGGATCGTGGTGAATAAGCAGTGTAGGTAAAGTAACATCAACCCCAGCTGGTATTAAAACTTCGCCCATCTTAGTTTCTGCATAAGTATGTTGATATTGACCAATAACAGGTGGGTATAACCTTAGGACTTCATAAAGTACCATGGTAACCTGCAGAACATTGTTCGGTGAGTCCGTACTGTTTTATTCACGATTTTTGCAAAATGTAGAGATCAATAAGGGTTGACAAGAATAGCGTCACTTAGAAGGATTTCAATATTGACAAAACAGAGAATAGCTTCAGTTGCACCCTATTCATCATTGACTTTGCTATCATGGATGTGATTGAATGTCATGAAACAATTTATACCAATAGATAGATGAAGATTGCCTAGTGTGCAATGAAAACTCACAATCTTGAAGTGGTTTAAAGATTCAAAATTTGGTTCTTTCTTCCCACAAATTTGCAAGACTTCTTGCCTAGCCTTTTCTTGCCATTCTGAGTGCATGGCCAAAACTATGACTGTCCATGTAAGCCAGCTTGCTGTTGTTTCCTGCCCTGCAAGGTAGAACTGCTTGCACTCCTCCATCACTTCATCAATTGTCAGTCCATCACCTTCATGTTCATTTTCTTTCTTCTTTGACTGCAAGAGCAGGCATAATAAGTCATCAACATTGTCTTCCTGGGTTCTCATGGAAATCTCTTTTCTTTGAATTAAATTCCCTATCATGGTTTTGATCTCCTTGTTCAGCTTCTCTCTCCTCCTGTTCTTGACTGTTGGAACAAATCTGCCACACACAAAGACACAAGTCAATCATCAAGGTTTGATTTCACAACAATTTTAGTTTAAGTTTCTGTTTTTATAAACTTCGCTTGCTTACTATCAATATCTTTGATTTCAATTTTTTTTTTTTAATTGAAAACTACTTTTTTAGATTCCAGCTAGGATCATGGATTACAAAACAAACTCGTAAGTAAACAGGTTTAATATTAAAAAATAGAAAATTAAAAACTAAATCGTTATCAAACGAGTTAAGCTTAAATAATGAATTCTGAATGGTTTACATTTATAATCCTACTCAGAATAGATGGGAAGCCAAACAAAGTTTATGAAAAAGAGAAATGGGACCTGAAACCAGGAAGATACAAGGTGTGCATGGCTTCAAGAGTAAGAACAGTGAGTTGTTTCAGAAGTTCAAAAATCTTCTTCCCTTCTTCAAAGTTGGAGCCAAATGCAGCCCGAGATAAAACATCTGCGGTTAGCCTCTGGATTTCGGGCCACACATCCACTTCACCGCTGTTGCCTTGA

mRNA sequence

ATGGAGCAAGATCCTCCCAAGAACAATACAGCTGCCCAAAGGAAGATGAAATTTGCTCCAAAAGCACCTCCTCGTCGTATACCAAAACCTGAAGTGAAAGCAGAAATTGCGGAGGATGCCGACGCAGCTCAGGCCAGGGATTTGCTAAAGCGCTTCAATGAAAGTACCATGAGGGCAAAGCAAAAAGTTGGAAAAAAAGTGGCACCTACACAAGTTGCATTTGGTTCTGGAGGTACGTCAACCTCCATAAGATCATTCGGTATTCCAAAATCTGGAAATAGTAGTACCAGACGTGAAGATGGAACTCTTCCGTCTAGTACAAGCAAGGAGTATGTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTTTGCGGAGACCATATTCAGGAAATCCAGATTGTCTTAACGAGGAAGAATTTGGAGAGGCTTCAGAAACCATAACATATGATGAAAATACAACAACTCCAGCAATGGATCTTGGTCTAATGGAGGAGAATCCAGAAACAAACATCTTTTTTCTTCAATTACCACCCATGGTGCCTGTGATAAAGCAATCTTCTACTGTAGTAGGCATGGAGGCAGCCGACAGCTTGGAACAAAGTAAGGGTTCACAACCTCGACAGAACTCCTGCACTTTGGATGGGTTACCTTCTGGCTCCATGGGTAAATTGCTTGTATACAGGAGTGGTGCTGTCAAGTTGAAGATTGGCGATATTGCATATGACGTTTCTTCTGGAATGGATTGTGGCTTTGCACAAGATGTTGCAGCTATCAACGTGGAAGGGAAGCATTGCTGCATTGTTGGAGAGCTTAGCAAGCGTGTGATTTTAACGCCAGATGTGGACTCAATCTTAAAAAATCTTCTCTCTCCTCCTGTTCTTGACTGTTGGAACAAATCTGCCACACACAAAGACACAAGTCAATCATCAAGAATAGATGGGAAGCCAAACAAAGTTTATGAAAAAGAGAAATGGGACCTGAAACCAGGAAGATACAAGGTGTGCATGGCTTCAAGAGTAAGAACAGTGAGTTGTTTCAGAAGTTCAAAAATCTTCTTCCCTTCTTCAAAGTTGGAGCCAAATGCAGCCCGAGATAAAACATCTGCGGTTAGCCTCTGGATTTCGGGCCACACATCCACTTCACCGCTGTTGCCTTGA

Coding sequence (CDS)

ATGGAGCAAGATCCTCCCAAGAACAATACAGCTGCCCAAAGGAAGATGAAATTTGCTCCAAAAGCACCTCCTCGTCGTATACCAAAACCTGAAGTGAAAGCAGAAATTGCGGAGGATGCCGACGCAGCTCAGGCCAGGGATTTGCTAAAGCGCTTCAATGAAAGTACCATGAGGGCAAAGCAAAAAGTTGGAAAAAAAGTGGCACCTACACAAGTTGCATTTGGTTCTGGAGGTACGTCAACCTCCATAAGATCATTCGGTATTCCAAAATCTGGAAATAGTAGTACCAGACGTGAAGATGGAACTCTTCCGTCTAGTACAAGCAAGGAGTATGTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTTTGCGGAGACCATATTCAGGAAATCCAGATTGTCTTAACGAGGAAGAATTTGGAGAGGCTTCAGAAACCATAACATATGATGAAAATACAACAACTCCAGCAATGGATCTTGGTCTAATGGAGGAGAATCCAGAAACAAACATCTTTTTTCTTCAATTACCACCCATGGTGCCTGTGATAAAGCAATCTTCTACTGTAGTAGGCATGGAGGCAGCCGACAGCTTGGAACAAAGTAAGGGTTCACAACCTCGACAGAACTCCTGCACTTTGGATGGGTTACCTTCTGGCTCCATGGGTAAATTGCTTGTATACAGGAGTGGTGCTGTCAAGTTGAAGATTGGCGATATTGCATATGACGTTTCTTCTGGAATGGATTGTGGCTTTGCACAAGATGTTGCAGCTATCAACGTGGAAGGGAAGCATTGCTGCATTGTTGGAGAGCTTAGCAAGCGTGTGATTTTAACGCCAGATGTGGACTCAATCTTAAAAAATCTTCTCTCTCCTCCTGTTCTTGACTGTTGGAACAAATCTGCCACACACAAAGACACAAGTCAATCATCAAGAATAGATGGGAAGCCAAACAAAGTTTATGAAAAAGAGAAATGGGACCTGAAACCAGGAAGATACAAGGTGTGCATGGCTTCAAGAGTAAGAACAGTGAGTTGTTTCAGAAGTTCAAAAATCTTCTTCCCTTCTTCAAAGTTGGAGCCAAATGCAGCCCGAGATAAAACATCTGCGGTTAGCCTCTGGATTTCGGGCCACACATCCACTTCACCGCTGTTGCCTTGA

Protein sequence

MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLPPMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNLLSPPVLDCWNKSATHKDTSQSSRIDGKPNKVYEKEKWDLKPGRYKVCMASRVRTVSCFRSSKIFFPSSKLEPNAARDKTSAVSLWISGHTSTSPLLP

Homology

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BLAST of Sgr027303 vs. NCBI nr
Match: XP_022147557.1 (DNA-directed RNA polymerase III subunit rpc4 [Momordica charantia])

HSP 1 Score: 493.8 bits (1270), Expect = 1.3e-135
Identity = 250/291 (85.91%), Postives = 268/291 (92.10%), Query Frame = 0


Query: 1   MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAK 60
           MEQDPPKNNT AQRKMKFAPKAPPRR+PKPEVKAEI E+ADAAQA+DLLKRFNESTMRAK
Sbjct: 1   MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAK 60

Query: 61  QKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYVEPWDYYSY 120
           QKVGKK APTQVAFGSGGTS +IRS+GIPK+GN   R EDGTLPSS SKEYVEPWDYYSY
Sbjct: 61  QKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGN-RPRNEDGTLPSSISKEYVEPWDYYSY 120

Query: 121 YPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLP 180
           YPVTLPLRRPYSG+PD LNEEEFGEASE  TYDE+ TTPAMDLGL+EENPETN+FFLQ+P
Sbjct: 121 YPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIP 180

Query: 181 PMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIG 240
           PMVPV KQSSTV GM AA S EQSKGS+ RQN C+L+ LPSGSMGKLLVYRSGAVKLK+G
Sbjct: 181 PMVPVTKQSSTVEGMVAASSSEQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLG 240

Query: 241 DIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL 292
           DI YDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKR ILTPDVDS+LK++
Sbjct: 241 DIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDI 290

[Close]

BLAST of Sgr027303 vs. NCBI nr
Match: XP_038878504.1 (uncharacterized protein LOC120070724 [Benincasa hispida] >XP_038878505.1 uncharacterized protein LOC120070724 [Benincasa hispida] >XP_038878507.1 uncharacterized protein LOC120070724 [Benincasa hispida] >XP_038878508.1 uncharacterized protein LOC120070724 [Benincasa hispida] >XP_038878509.1 uncharacterized protein LOC120070724 [Benincasa hispida] >XP_038878510.1 uncharacterized protein LOC120070724 [Benincasa hispida] >XP_038878511.1 uncharacterized protein LOC120070724 [Benincasa hispida])

HSP 1 Score: 487.6 bits (1254), Expect = 9.6e-134
Identity = 244/291 (83.85%), Postives = 267/291 (91.75%), Query Frame = 0


Query: 1   MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAK 60
           MEQDPPKN TAA RK+KFAPKAP RRIPKPEVKAEIAEDADAAQARDLLKRFNEST+R K
Sbjct: 1   MEQDPPKNKTAAPRKLKFAPKAPIRRIPKPEVKAEIAEDADAAQARDLLKRFNESTLRTK 60

Query: 61  QKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYVEPWDYYSY 120
           QK+G+K APTQVAFGSGGTS+++RS+G+ K+GN   R EDGTLPSSTSKEYVEPWDYYSY
Sbjct: 61  QKIGRKAAPTQVAFGSGGTSSTLRSYGVSKAGN-RPRNEDGTLPSSTSKEYVEPWDYYSY 120

Query: 121 YPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLP 180
           YPVTLPLRRPYSGNPD LNEEEFGEASE   YDENTTTPAMDLGL+EENPE ++FFLQLP
Sbjct: 121 YPVTLPLRRPYSGNPDSLNEEEFGEASENFAYDENTTTPAMDLGLLEENPEMDVFFLQLP 180

Query: 181 PMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIG 240
           PMVP++KQSSTV G  AA+SLEQSKGSQPRQ +C ++ LPSGSMGKLLVYRSGAVKLK+G
Sbjct: 181 PMVPMVKQSSTVEGTGAANSLEQSKGSQPRQKACLMNELPSGSMGKLLVYRSGAVKLKLG 240

Query: 241 DIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL 292
           DI YDVSSGMDCGFAQDVAA+NVEGK CCIVGELSKR ILTPDVDS+LKN+
Sbjct: 241 DIIYDVSSGMDCGFAQDVAAVNVEGKCCCIVGELSKRAILTPDVDSVLKNI 290

[Close]

BLAST of Sgr027303 vs. NCBI nr
Match: XP_023529312.1 (uncharacterized protein LOC111792200 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.9 bits (1213), Expect = 5.5e-129
Identity = 238/291 (81.79%), Postives = 263/291 (90.38%), Query Frame = 0


Query: 1   MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAK 60
           MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE++E ADAAQARDLLKRFNE+T RAK
Sbjct: 1   MEQDPTKNNAAAQRKMKFAPKAPPRRIPKTEVKAEVSEAADAAQARDLLKRFNETTQRAK 60

Query: 61  QKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYVEPWDYYSY 120
           QKVGKK APTQVAFG+GGTS+S+R++G  K+GN   + EDGTLPSST KEYVEPWDYYSY
Sbjct: 61  QKVGKKAAPTQVAFGTGGTSSSLRTYGFSKAGN-KLKNEDGTLPSSTGKEYVEPWDYYSY 120

Query: 121 YPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLP 180
           YPVTLPLRRPYSGNPD LNE EFGEASE+ TYDENTTTPAMDLGL+E+N ETNIFFLQLP
Sbjct: 121 YPVTLPLRRPYSGNPDSLNEYEFGEASESRTYDENTTTPAMDLGLLEDNQETNIFFLQLP 180

Query: 181 PMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIG 240
           PMVPV +QSST   MEAA+SLEQ+KGSQP Q +CTL+  PSGSMGKLLVYRSGAVKLK+G
Sbjct: 181 PMVPVTEQSSTAEVMEAANSLEQNKGSQPPQKTCTLNEFPSGSMGKLLVYRSGAVKLKLG 240

Query: 241 DIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL 292
           +I YDVSSGMDCGFAQ++AAINVEGK CCIVGELSKR +LTPDVDS+LKN+
Sbjct: 241 NIVYDVSSGMDCGFAQELAAINVEGKRCCIVGELSKRAVLTPDVDSMLKNI 290

[Close]

BLAST of Sgr027303 vs. NCBI nr
Match: XP_022968121.1 (uncharacterized protein LOC111467450 [Cucurbita maxima])

HSP 1 Score: 468.8 bits (1205), Expect = 4.6e-128
Identity = 238/291 (81.79%), Postives = 262/291 (90.03%), Query Frame = 0


Query: 1   MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAK 60
           MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE++E ADAAQARDLLKRFNE+T RAK
Sbjct: 1   MEQDPTKNNAAAQRKMKFAPKAPPRRIPKTEVKAEVSEAADAAQARDLLKRFNETTQRAK 60

Query: 61  QKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYVEPWDYYSY 120
           QKVGKK APTQVAFG+GGTS+S+R+FG  K+GN   R EDGTLP   S+EYVEPWDYYSY
Sbjct: 61  QKVGKKAAPTQVAFGTGGTSSSLRTFGFSKAGN-KLRNEDGTLP---SREYVEPWDYYSY 120

Query: 121 YPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLP 180
           YPVTLPLRRPYSGNPD LNE EFGEASE+ TYDENTTTPAMDLGL+E+NPETNIFFLQLP
Sbjct: 121 YPVTLPLRRPYSGNPDSLNEYEFGEASESRTYDENTTTPAMDLGLLEDNPETNIFFLQLP 180

Query: 181 PMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIG 240
           PMVPV +QSST  GMEAA+SLEQ+K SQP Q +C+L+  PSGSMGKLLVYRSGAVKLK+G
Sbjct: 181 PMVPVTEQSSTAEGMEAANSLEQNKDSQPPQKTCSLNEFPSGSMGKLLVYRSGAVKLKLG 240

Query: 241 DIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL 292
           DI YDVSSGMDCGFAQ++AAINVEGK CCIVGELSKR +LTPDVDS+LKN+
Sbjct: 241 DIVYDVSSGMDCGFAQELAAINVEGKRCCIVGELSKRAVLTPDVDSMLKNI 287

[Close]

BLAST of Sgr027303 vs. NCBI nr
Match: XP_004144123.1 (DNA-directed RNA polymerase III subunit RPC4 [Cucumis sativus] >XP_031736467.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis sativus] >XP_031736470.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis sativus] >KGN66283.1 hypothetical protein Csa_007538 [Cucumis sativus])

HSP 1 Score: 467.2 bits (1201), Expect = 1.3e-127
Identity = 233/291 (80.07%), Postives = 265/291 (91.07%), Query Frame = 0


Query: 1   MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAK 60
           MEQ+PPKN TAA RK+KFAPKAP RRIPKPEVKAE+AEDADAAQARDLLKRFNEST RAK
Sbjct: 1   MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAK 60

Query: 61  QKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYVEPWDYYSY 120
           Q+VG+K APTQVAFGSGG+S+++RS+G+ K+GN   R EDGTLP+STSKEYVEPWDYYSY
Sbjct: 61  QRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGN-RPRNEDGTLPASTSKEYVEPWDYYSY 120

Query: 121 YPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLP 180
           YPVTLPLRRPYSGNPD LNEEEFGEASE +TYDENTTT AM+LGL+EENPE ++ FLQLP
Sbjct: 121 YPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLP 180

Query: 181 PMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIG 240
           PMVP+IKQSS+V  M + +S EQ+K SQPRQ +C+++ LPSGS+GKLLVYRSGAVKLK+G
Sbjct: 181 PMVPMIKQSSSVEDMGSGNSSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLG 240

Query: 241 DIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL 292
           DI YDVSSGMDCGFAQ+VAAINVEGK CCIVGELSKR ILTPDVDS+LKN+
Sbjct: 241 DIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNI 290

[Close]

BLAST of Sgr027303 vs. ExPASy Swiss-Prot
Match: Q91WD1 (DNA-directed RNA polymerase III subunit RPC4 OS=Mus musculus OX=10090 GN=Polr3d PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 9.1e-10
Identity = 41/140 (29.29%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 162 DLGLMEENPETNIFFLQLPPMVP------VIKQSSTVV----GMEAADSLEQSKGSQPRQ 221
           +L LM++     + FLQLP  +P       IK   T V    G       E+ + ++  +
Sbjct: 257 ELSLMKDE---ELLFLQLPDTLPGQPPTQDIKPVKTEVQGEDGQMVVIKQEKDREARLAE 316

Query: 222 NSCTLDGLPSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGK---HC 281
           N+CTL  L  G +GKLL+ +SG V+L +G +  DV+ G  C F Q++ ++ +        
Sbjct: 317 NACTLADLTEGQVGKLLIRKSGKVQLLLGKVTLDVTMGTTCSFLQELVSVGLGDSRTGEM 376

Query: 282 CIVGELSKRVILTPDVDSIL 289
            ++G +  +++ +PD +S+L
Sbjct: 377 TVLGHVKHKLVCSPDFESLL 393

[Close]

BLAST of Sgr027303 vs. ExPASy Swiss-Prot
Match: Q5E9Z7 (DNA-directed RNA polymerase III subunit RPC4 OS=Bos taurus OX=9913 GN=POLR3D PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.0e-09
Identity = 40/131 (30.53%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 171 ETNIFFLQLPPMVP------VIKQSSTVVGMEAADS--LEQSKGSQPR--QNSCTLDGLP 230
           E  + FLQLP  +P       IK   T V  E      ++Q K  + R  +N+CTL  L 
Sbjct: 263 EEELLFLQLPDSLPGQPPTQDIKPIKTEVQSEDGQMVVIKQEKDREARLAENTCTLADLT 322

Query: 231 SGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKH---CCIVGELSKR 289
            G +GKLL+ +SG V+L +G +  DV+ G  C F Q++ ++ +         ++G +  +
Sbjct: 323 EGQVGKLLIRKSGKVQLLLGKVTLDVTMGTTCSFLQELVSVGLGDSRTGDMTVLGHIKHK 382

[Close]

BLAST of Sgr027303 vs. ExPASy Swiss-Prot
Match: P05423 (DNA-directed RNA polymerase III subunit RPC4 OS=Homo sapiens OX=9606 GN=POLR3D PE=1 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 2.0e-09
Identity = 39/131 (29.77%), Postives = 68/131 (51.91%), Query Frame = 0


Query: 171 ETNIFFLQLPPMVP------VIKQSSTVV----GMEAADSLEQSKGSQPRQNSCTLDGLP 230
           E  + FLQLP  +P       IK   T V    G       E+ + ++  +N+CTL  L 
Sbjct: 263 EEELLFLQLPDTLPGQPPTQDIKPIKTEVQGEDGQVVLIKQEKDREAKLAENACTLADLT 322

Query: 231 SGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGK---HCCIVGELSKR 289
            G +GKLL+ +SG V+L +G +  DV+ G  C F Q++ ++ +         ++G +  +
Sbjct: 323 EGQVGKLLIRKSGRVQLLLGKVTLDVTMGTACSFLQELVSVGLGDSRTGEMTVLGHVKHK 382

[Close]

BLAST of Sgr027303 vs. ExPASy Swiss-Prot
Match: P25441 (DNA-directed RNA polymerase III subunit RPC4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPC53 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-05
Identity = 31/127 (24.41%), Postives = 65/127 (51.18%), Query Frame = 0


Query: 166 MEENPETNIFFLQLPPMV-----PVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLP 225
           M   PE  + F QLP  +     P +K+    +  +A+D  ++ K  + +     L    
Sbjct: 297 MNNKPERFMVF-QLPTRLPAFERPAVKEEKEDMETQASDPSKKKKNIKKKDTKDALSTRE 356

Query: 226 -SGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINV--EGKHCCIVGELSKR 285
            +G +G + V++SG + +KIG++  D+  G +  F QDV A+++  +     ++G +  +
Sbjct: 357 LAGKVGSIRVHKSGKLSVKIGNVVMDIGKGAETTFLQDVIALSIADDASSAELLGRVDGK 416

[Close]

BLAST of Sgr027303 vs. ExPASy Swiss-Prot
Match: O74857 (DNA-directed RNA polymerase III subunit rpc4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpc53 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 5.7e-04
Identity = 79/331 (23.87%), Postives = 130/331 (39.27%), Query Frame = 0


Query: 17  KFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPTQVAFG- 76
           KF PK  PRR   P  + ++ E        +  K++  S  R K ++ K  A    A G 
Sbjct: 3   KFTPKFVPRRKNGPVEEKDVDERVKIEFDVESQKKWKAS--RPKPEI-KLTASGPFALGP 62

Query: 77  ---SGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYVEPWDYYSYYPVTL-PLRRPY 136
              S GT   I S  +P     +  ++D     + S  + E  D      + L  L    
Sbjct: 63  NASSSGTGRPIGSVYVPPPNVKNEEKDDALSKLAASSGHDEGHDEDMVDILKLRELNGQE 122

Query: 137 SGNPDC-----------------LNEEEFGEASETITY-------DENTTTPAMD----- 196
            G  D                   N+E+    +E+  +       DE     A+D     
Sbjct: 123 QGKTDIGGKDLLVPIITDRMLPESNDEKLKHHAESAIHTTVINKEDEEQERVALDLQSLA 182

Query: 197 --LGL-----MEENPETNIFFLQLPPMVP---------VIKQSSTVVGMEAADSLEQSKG 256
             LGL     ME++ +  +  +Q P  +P          +  SS V   EA +  +  + 
Sbjct: 183 QHLGLTEQEGMEDHFKDQMVLMQFPDKLPRFMGDADVDPVWPSSEVKEEEAGEKTDVEEK 242

Query: 257 SQP----RQNSCTLDGL----------PSGSMGKLLVYRSGAVKLKIGDIAYDVSSGMDC 284
             P    R+N   +D L          P+G +G L V++SG   L++G + + V SG DC
Sbjct: 243 KDPDKHGRENG-NIDDLTSLPYPAFHPPAGQIGVLRVHQSGKTTLEMGGVNFVVQSGSDC 302

[Close]

BLAST of Sgr027303 vs. ExPASy TrEMBL
Match: A0A6J1D2P1 (DNA-directed RNA polymerase III subunit rpc4 OS=Momordica charantia OX=3673 GN=LOC111016454 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 6.5e-136
Identity = 250/291 (85.91%), Postives = 268/291 (92.10%), Query Frame = 0


Query: 1   MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAK 60
           MEQDPPKNNT AQRKMKFAPKAPPRR+PKPEVKAEI E+ADAAQA+DLLKRFNESTMRAK
Sbjct: 1   MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAK 60

Query: 61  QKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYVEPWDYYSY 120
           QKVGKK APTQVAFGSGGTS +IRS+GIPK+GN   R EDGTLPSS SKEYVEPWDYYSY
Sbjct: 61  QKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGN-RPRNEDGTLPSSISKEYVEPWDYYSY 120

Query: 121 YPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLP 180
           YPVTLPLRRPYSG+PD LNEEEFGEASE  TYDE+ TTPAMDLGL+EENPETN+FFLQ+P
Sbjct: 121 YPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIP 180

Query: 181 PMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIG 240
           PMVPV KQSSTV GM AA S EQSKGS+ RQN C+L+ LPSGSMGKLLVYRSGAVKLK+G
Sbjct: 181 PMVPVTKQSSTVEGMVAASSSEQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLG 240

Query: 241 DIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL 292
           DI YDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKR ILTPDVDS+LK++
Sbjct: 241 DIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDI 290

[Close]

BLAST of Sgr027303 vs. ExPASy TrEMBL
Match: A0A6J1HTZ8 (uncharacterized protein LOC111467450 OS=Cucurbita maxima OX=3661 GN=LOC111467450 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 2.2e-128
Identity = 238/291 (81.79%), Postives = 262/291 (90.03%), Query Frame = 0


Query: 1   MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAK 60
           MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE++E ADAAQARDLLKRFNE+T RAK
Sbjct: 1   MEQDPTKNNAAAQRKMKFAPKAPPRRIPKTEVKAEVSEAADAAQARDLLKRFNETTQRAK 60

Query: 61  QKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYVEPWDYYSY 120
           QKVGKK APTQVAFG+GGTS+S+R+FG  K+GN   R EDGTLP   S+EYVEPWDYYSY
Sbjct: 61  QKVGKKAAPTQVAFGTGGTSSSLRTFGFSKAGN-KLRNEDGTLP---SREYVEPWDYYSY 120

Query: 121 YPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLP 180
           YPVTLPLRRPYSGNPD LNE EFGEASE+ TYDENTTTPAMDLGL+E+NPETNIFFLQLP
Sbjct: 121 YPVTLPLRRPYSGNPDSLNEYEFGEASESRTYDENTTTPAMDLGLLEDNPETNIFFLQLP 180

Query: 181 PMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIG 240
           PMVPV +QSST  GMEAA+SLEQ+K SQP Q +C+L+  PSGSMGKLLVYRSGAVKLK+G
Sbjct: 181 PMVPVTEQSSTAEGMEAANSLEQNKDSQPPQKTCSLNEFPSGSMGKLLVYRSGAVKLKLG 240

Query: 241 DIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL 292
           DI YDVSSGMDCGFAQ++AAINVEGK CCIVGELSKR +LTPDVDS+LKN+
Sbjct: 241 DIVYDVSSGMDCGFAQELAAINVEGKRCCIVGELSKRAVLTPDVDSMLKNI 287

[Close]

BLAST of Sgr027303 vs. ExPASy TrEMBL
Match: A0A0A0LWX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G595870 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 6.5e-128
Identity = 233/291 (80.07%), Postives = 265/291 (91.07%), Query Frame = 0


Query: 1   MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAK 60
           MEQ+PPKN TAA RK+KFAPKAP RRIPKPEVKAE+AEDADAAQARDLLKRFNEST RAK
Sbjct: 1   MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAK 60

Query: 61  QKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYVEPWDYYSY 120
           Q+VG+K APTQVAFGSGG+S+++RS+G+ K+GN   R EDGTLP+STSKEYVEPWDYYSY
Sbjct: 61  QRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGN-RPRNEDGTLPASTSKEYVEPWDYYSY 120

Query: 121 YPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLP 180
           YPVTLPLRRPYSGNPD LNEEEFGEASE +TYDENTTT AM+LGL+EENPE ++ FLQLP
Sbjct: 121 YPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLLEENPEADVLFLQLP 180

Query: 181 PMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIG 240
           PMVP+IKQSS+V  M + +S EQ+K SQPRQ +C+++ LPSGS+GKLLVYRSGAVKLK+G
Sbjct: 181 PMVPMIKQSSSVEDMGSGNSSEQNKASQPRQKTCSMNELPSGSIGKLLVYRSGAVKLKLG 240

Query: 241 DIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL 292
           DI YDVSSGMDCGFAQ+VAAINVEGK CCIVGELSKR ILTPDVDS+LKN+
Sbjct: 241 DIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDSMLKNI 290

[Close]

BLAST of Sgr027303 vs. ExPASy TrEMBL
Match: A0A6J1F0U0 (DNA-directed RNA polymerase III subunit RPC4-like OS=Cucurbita moschata OX=3662 GN=LOC111441105 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 1.1e-127
Identity = 238/291 (81.79%), Postives = 262/291 (90.03%), Query Frame = 0


Query: 1   MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAK 60
           MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE++E ADAAQARDLLKRFNE+T RAK
Sbjct: 1   MEQDPTKNNAAAQRKMKFAPKAPPRRIPKTEVKAEVSEAADAAQARDLLKRFNETTQRAK 60

Query: 61  QKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYVEPWDYYSY 120
           QKVGKK APTQVAFG+GGTS+S+R++G  K+GN   R EDGTLPS  SKEYVEPWDYYSY
Sbjct: 61  QKVGKKAAPTQVAFGTGGTSSSLRTYGSSKAGN-KLRNEDGTLPS--SKEYVEPWDYYSY 120

Query: 121 YPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLP 180
           YPVTLPLRRPYSGNPD LNE EFGEASE  TYDENTTTPAMDLGL+E+NPETNIFFLQLP
Sbjct: 121 YPVTLPLRRPYSGNPDSLNEYEFGEASEARTYDENTTTPAMDLGLLEDNPETNIFFLQLP 180

Query: 181 PMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIG 240
           PMVPV +QSST  GMEAA+SLEQ+K SQP Q +C+L+  PSGSMGKLLVYRSGAVKLK+G
Sbjct: 181 PMVPVTEQSSTAEGMEAANSLEQNKVSQPPQKTCSLNEFPSGSMGKLLVYRSGAVKLKLG 240

Query: 241 DIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL 292
           +I YDVSSGMDCGFAQ++AAINVEGK CCIVGELSKR +LTPDVDS+LKN+
Sbjct: 241 NIVYDVSSGMDCGFAQELAAINVEGKRCCIVGELSKRAVLTPDVDSMLKNI 288

[Close]

BLAST of Sgr027303 vs. ExPASy TrEMBL
Match: A0A1S3BPR1 (DNA-directed RNA polymerase III subunit RPC4 OS=Cucumis melo OX=3656 GN=LOC103492360 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 7.2e-127
Identity = 231/291 (79.38%), Postives = 262/291 (90.03%), Query Frame = 0


Query: 1   MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAEDADAAQARDLLKRFNESTMRAK 60
           MEQDPPKN TA  RK+KFAPKAP RR+PKPEVKAE+AED DAAQARDLLKRFNEST RAK
Sbjct: 1   MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAK 60

Query: 61  QKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSKEYVEPWDYYSY 120
           Q+VG+K APTQVAFGSGG+S+++RS+G+ K+GN   R EDGTLP+STSKEYVEPWDYYSY
Sbjct: 61  QRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGN-RPRNEDGTLPASTSKEYVEPWDYYSY 120

Query: 121 YPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFLQLP 180
           YPVTLPLRRPYSGNPD LNEEEFGEASE  TYDENTTT AM+LGL+EENPET++FFLQLP
Sbjct: 121 YPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLP 180

Query: 181 PMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKLKIG 240
           PMVP+IKQSSTV  M + +  EQ+  SQ RQ +C+++ LPSGSMGKLLVYRSGAVKLK+G
Sbjct: 181 PMVPMIKQSSTVENMGSGNVSEQNSASQTRQKTCSMNELPSGSMGKLLVYRSGAVKLKLG 240

Query: 241 DIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL 292
           DI YDVSSGMDCGFAQ+VAAIN+EGKHCCIVGELSKR ILTPDVDS+L+N+
Sbjct: 241 DIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNI 290

[Close]

BLAST of Sgr027303 vs. TAIR 10
Match: AT5G09380.1 (RNA polymerase III RPC4 )

HSP 1 Score: 235.7 bits (600), Expect = 6.1e-62
Identity = 139/294 (47.28%), Postives = 195/294 (66.33%), Query Frame = 0


Query: 1   MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEIAED-ADAAQARDLLKRFNESTMRA 60
           MEQ PP       RKMKFAPKAPP+R+PKPEVK E+ ED +++AQA +LL+R NE ++R 
Sbjct: 1   MEQKPP------VRKMKFAPKAPPKRVPKPEVKPEVVEDNSNSAQASELLRRVNERSLR- 60

Query: 61  KQKVGKKVAPTQVAFGSGGTSTSIRSFGIPKSGNSSTRREDGTLPSSTSK--EYVEPWDY 120
           K K  KKV  +QVA+  GG   S RS       N    R +G   S++++  EY EPWDY
Sbjct: 61  KPKADKKVPASQVAW-LGGVVNSTRS-------NKYLNRSNGAYGSTSTQEIEYKEPWDY 120

Query: 121 YSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGLMEENPETNIFFL 180
           YSYYP+TLP+RRPY+G+P+ L+ EEF +A     + E++   A +LGLME++ E  +FF+
Sbjct: 121 YSYYPITLPMRRPYAGDPEVLDVEEFMQAG---GHHEDSLNTAANLGLMEDSGEQKMFFM 180

Query: 181 QLPPMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSMGKLLVYRSGAVKL 240
           +L P VP+   S+    +E   +++        + +  L  LP G MGKLLVY+SGAVK+
Sbjct: 181 RL-PSVPL--ASTPTENLETRPNIK----GPVEKKTVDLKALPEGYMGKLLVYKSGAVKM 240

Query: 241 KIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDVDSILKNL 292
           K+G++ YDVS G+   FAQDV  +N E K+CC+VG++ K  +LTPD+DSILK++
Sbjct: 241 KLGEVLYDVSPGLKSEFAQDVMVVNTEQKNCCLVGDVYKHAVLTPDIDSILKDI 269

[Close]

BLAST of Sgr027303 vs. TAIR 10
Match: AT4G25180.1 (RNA polymerase III RPC4 )

HSP 1 Score: 165.2 bits (417), Expect = 1.0e-40
Identity = 109/304 (35.86%), Postives = 165/304 (54.28%), Query Frame = 0


Query: 12  AQRKMKFAPKAPPRRIP-KPEVKAEIAEDADAAQARDLLKRFNESTMRAKQKVGKKVAPT 71
           ++R+ +  P  P RR+P  P    E  ED +  +A    ++F+   +  + K   K +  
Sbjct: 8   SKRRFQPNPPRPSRRLPIAPTSNTEAEEDEENIKAS---RQFDRRIVGRRPKTETKASSP 67

Query: 72  QVAFGSGGTSTSIRSFGIPKSGNS--------------------STRREDG----TLPSS 131
           +VAF    +  +IRSFG+PK  +                     +  +EDG       + 
Sbjct: 68  EVAFQPSLSPLAIRSFGVPKEDDKPNSDVNPSSPASILPAVSSVTAAQEDGEEVHNFVTR 127

Query: 132 TSKEYVEPWDY-YSYYPVTLPLRRPYSGNPDCLNEEEFGEASETITYDENTTTPAMDLGL 191
           T  +YVEPWDY  SYYP  LPLR+P SG+ + L++EEFGE ++   YDENT   A +LGL
Sbjct: 128 TGDDYVEPWDYRNSYYPTVLPLRKPNSGDIELLDQEEFGEVAKNRDYDENTINSAEELGL 187

Query: 192 ME-ENPETNIFFLQLPPMVPVIKQSSTVVGMEAADSLEQSKGSQPRQNSCTLDGLPSGSM 251
              ++ +  +F  ++P  +PV+KQ++      +    E S G      S   +GLP G M
Sbjct: 188 TSVQHSKKQMFIFKIPDCLPVVKQTTGATTKRSV--REYSSGI-----SNPFEGLPEGFM 247

Query: 252 GKLLVYRSGAVKLKIGDIAYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRVILTPDV 289
           GK+LVY+SGAVKLK+GD  +DVS G       DV AI+++G++C  +G  +K V +TPDV
Sbjct: 248 GKMLVYKSGAVKLKVGDALFDVSPGPGTKIPNDVVAIDIKGRNCSRIGSSAKFVTVTPDV 301

The following BLAST results are available for this feature:

BLAST of Sgr027303 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147557.1	1.3e-135	85.91	DNA-directed RNA polymerase III subunit rpc4 [Momordica charantia]	[more]
XP_038878504.1	9.6e-134	83.85	uncharacterized protein LOC120070724 [Benincasa hispida] >XP_038878505.1 unchara...	[more]
XP_023529312.1	5.5e-129	81.79	uncharacterized protein LOC111792200 [Cucurbita pepo subsp. pepo]	[more]
XP_022968121.1	4.6e-128	81.79	uncharacterized protein LOC111467450 [Cucurbita maxima]	[more]
XP_004144123.1	1.3e-127	80.07	DNA-directed RNA polymerase III subunit RPC4 [Cucumis sativus] >XP_031736467.1 D...	[more]

BLAST of Sgr027303 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91WD1	9.1e-10	29.29	DNA-directed RNA polymerase III subunit RPC4 OS=Mus musculus OX=10090 GN=Polr3d ...	[more]
Q5E9Z7	2.0e-09	30.53	DNA-directed RNA polymerase III subunit RPC4 OS=Bos taurus OX=9913 GN=POLR3D PE=...	[more]
P05423	2.0e-09	29.77	DNA-directed RNA polymerase III subunit RPC4 OS=Homo sapiens OX=9606 GN=POLR3D P...	[more]
P25441	1.4e-05	24.41	DNA-directed RNA polymerase III subunit RPC4 OS=Saccharomyces cerevisiae (strain...	[more]
O74857	5.7e-04	23.87	DNA-directed RNA polymerase III subunit rpc4 OS=Schizosaccharomyces pombe (strai...	[more]

BLAST of Sgr027303 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D2P1	6.5e-136	85.91	DNA-directed RNA polymerase III subunit rpc4 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1HTZ8	2.2e-128	81.79	uncharacterized protein LOC111467450 OS=Cucurbita maxima OX=3661 GN=LOC111467450...	[more]
A0A0A0LWX7	6.5e-128	80.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G595870 PE=4 SV=1	[more]
A0A6J1F0U0	1.1e-127	81.79	DNA-directed RNA polymerase III subunit RPC4-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A1S3BPR1	7.2e-127	79.38	DNA-directed RNA polymerase III subunit RPC4 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]

BLAST of Sgr027303 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09380.1	6.1e-62	47.28	RNA polymerase III RPC4	[more]
AT4G25180.1	1.0e-40	35.86	RNA polymerase III RPC4	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007811	DNA-directed RNA polymerase III subunit RPC4	PFAM	PF05132	RNA_pol_Rpc4	coord: 173..284 e-value: 3.3E-22 score: 79.5
IPR007811	DNA-directed RNA polymerase III subunit RPC4	PANTHER	PTHR13408	DNA-DIRECTED RNA POLYMERASE III	coord: 106..291
IPR007811	DNA-directed RNA polymerase III subunit RPC4	PANTHER	PTHR13408	DNA-DIRECTED RNA POLYMERASE III	coord: 8..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..108
None	No IPR available	PANTHER	PTHR13408:SF6	DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4-LIKE ISOFORM X1	coord: 8..97
None	No IPR available	PANTHER	PTHR13408:SF6	DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4-LIKE ISOFORM X1	coord: 106..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr027303.1	Sgr027303.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006383	transcription by RNA polymerase III
cellular_component	GO:0005666	RNA polymerase III complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity