Sgr027246 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr027246
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153048: 2362276 .. 2362773 (+)
RNA-Seq Expression	Sgr027246
Synteny	Sgr027246

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGAAAATTCTGAAGCTGGAGCAGAATGGCAGAAAATCGTTCTTAGTTCTTACCCACAACAGCCCATTGAGGGAGCCCTCCAAAGCTGGGAAGAAGAAGCACTTTTCCGAGATCTGAAAGCAGCAGCCAATGGTTCAATTATGATGAAAACGAAGAGAGGAAATGAATCATTCGAAAGAAGTTGCTGTATAAATTTTACCATGAATGAGAGCAGTCAAGTGCAACCAATCTTCTTCGGGATAATCTTTTCGAATGGCTTCGGCCGTCTGCAACAAATGCTGAATCTGAGGTTCGTCCAAATCAGGATCACTGTCATCAACCACATCATTGAGGAGCTCACAGCATTCCCATATGCTCATCTCCACTCGATCCATTCTCCCGTATTCTTCTCTCATCTTCTTCACGAAATCGTAGGTCTGGTGAATGTGGTTCATCCGATAGAATTCCTCCACACTCTTTTGCCTCTCGCTTTCGGCCTCGTAATCTCTGAATGA

mRNA sequence

ATGAGAGAAAATTCTGAAGCTGGAGCAGAATGGCAGAAAATCGTTCTTAGTTCTTACCCACAACAGCCCATTGAGGGAGCCCTCCAAAGCTGGGAAGAAGAAGCACTTTTCCGAGATCTGAAAGCAGCAGCCAATGGTTCAATTATGATGAAAACGAAGAGAGGAAATGAATCATTCGAAAGAAGTTGCTGTATAAATTTTACCATGAATGAGAGCAGTCAAGTGCAACCAATCTTCTTCGGGATAATCTTTTCGAATGGCTTCGGCCGTCTGCAACAAATGCTGAATCTGAGGTTCGTCCAAATCAGGATCACTGTCATCAACCACATCATTGAGGAGCTCACAGCATTCCCATATGCTCATCTCCACTCGATCCATTCTCCCGTATTCTTCTCTCATCTTCTTCACGAAATCGTAGGTCTGGTGAATGTGGTTCATCCGATAGAATTCCTCCACACTCTTTTGCCTCTCGCTTTCGGCCTCGTAATCTCTGAATGA

Coding sequence (CDS)

ATGAGAGAAAATTCTGAAGCTGGAGCAGAATGGCAGAAAATCGTTCTTAGTTCTTACCCACAACAGCCCATTGAGGGAGCCCTCCAAAGCTGGGAAGAAGAAGCACTTTTCCGAGATCTGAAAGCAGCAGCCAATGGTTCAATTATGATGAAAACGAAGAGAGGAAATGAATCATTCGAAAGAAGTTGCTGTATAAATTTTACCATGAATGAGAGCAGTCAAGTGCAACCAATCTTCTTCGGGATAATCTTTTCGAATGGCTTCGGCCGTCTGCAACAAATGCTGAATCTGAGGTTCGTCCAAATCAGGATCACTGTCATCAACCACATCATTGAGGAGCTCACAGCATTCCCATATGCTCATCTCCACTCGATCCATTCTCCCGTATTCTTCTCTCATCTTCTTCACGAAATCGTAGGTCTGGTGAATGTGGTTCATCCGATAGAATTCCTCCACACTCTTTTGCCTCTCGCTTTCGGCCTCGTAATCTCTGAATGA

Protein sequence

MRENSEAGAEWQKIVLSSYPQQPIEGALQSWEEEALFRDLKAAANGSIMMKTKRGNESFERSCCINFTMNESSQVQPIFFGIIFSNGFGRLQQMLNLRFVQIRITVINHIIEELTAFPYAHLHSIHSPVFFSHLLHEIVGLVNVVHPIEFLHTLLPLAFGLVISE

Homology

[Close]

BLAST of Sgr027246 vs. NCBI nr
Match: RHN39200.1 (hypothetical protein MtrunA17_Chr8g0341291 [Medicago truncatula])

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-05
Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 94  MLNLRFVQIRITVINHIIEELTAFPYAHLHSIHSPVFFSHLLH 137
           MLNL F+Q+R+T I+H I++ T FPYAHL+ +  P+FFSH LH
Sbjct: 1   MLNLWFIQVRVTFIHHFIQKFTTFPYAHLYPVQFPIFFSHFLH 43

[Close]

BLAST of Sgr027246 vs. NCBI nr
Match: RRT82624.1 (hypothetical protein B296_00019623 [Ensete ventricosum])

HSP 1 Score: 58.5 bits (140), Expect = 6.1e-05
Identity = 25/64 (39.06%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 68  TMNESSQVQPIFFGIIFSNGFGRLQQMLNLRFVQIRITVINHIIEELTAFPYAHLHSIHS 127
           TM+ESS+V+P+   ++ S+G G L+++ +L  +++ I +++ +IE+L AFPYAHL  +  
Sbjct: 94  TMDESSEVKPVLIRVVSSDGLGGLKKVFDLGLIKVWIALVDELIEKLDAFPYAHLPLLQL 153

Query: 128 PVFF 132
           P+ F
Sbjct: 154 PILF 157

[Close]

BLAST of Sgr027246 vs. NCBI nr
Match: RWW01553.1 (hypothetical protein GW17_00035403 [Ensete ventricosum] >RWW68388.1 hypothetical protein BHE74_00024146 [Ensete ventricosum] >RZR98198.1 hypothetical protein BHM03_00027513 [Ensete ventricosum])

HSP 1 Score: 58.5 bits (140), Expect = 6.1e-05
Identity = 25/64 (39.06%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 68  TMNESSQVQPIFFGIIFSNGFGRLQQMLNLRFVQIRITVINHIIEELTAFPYAHLHSIHS 127
           TM+ESS+V+P+   ++ S+G G L+++ +L  +++ I +++ +IE+L AFPYAHL  +  
Sbjct: 92  TMDESSEVKPVLIRVVSSDGLGGLKKVFDLGLIKVWIALVDELIEKLDAFPYAHLPLLQL 151

Query: 128 PVFF 132
           P+ F
Sbjct: 152 PILF 155

[Close]

BLAST of Sgr027246 vs. ExPASy TrEMBL
Match: A0A396GDA3 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr8g0341291 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.0e-05
Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 94  MLNLRFVQIRITVINHIIEELTAFPYAHLHSIHSPVFFSHLLH 137
           MLNL F+Q+R+T I+H I++ T FPYAHL+ +  P+FFSH LH
Sbjct: 1   MLNLWFIQVRVTFIHHFIQKFTTFPYAHLYPVQFPIFFSHFLH 43

[Close]

BLAST of Sgr027246 vs. ExPASy TrEMBL
Match: A0A427B2C3 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00019623 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.0e-05
Identity = 25/64 (39.06%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 68  TMNESSQVQPIFFGIIFSNGFGRLQQMLNLRFVQIRITVINHIIEELTAFPYAHLHSIHS 127
           TM+ESS+V+P+   ++ S+G G L+++ +L  +++ I +++ +IE+L AFPYAHL  +  
Sbjct: 94  TMDESSEVKPVLIRVVSSDGLGGLKKVFDLGLIKVWIALVDELIEKLDAFPYAHLPLLQL 153

Query: 128 PVFF 132
           P+ F
Sbjct: 154 PILF 157

[Close]

BLAST of Sgr027246 vs. ExPASy TrEMBL
Match: A0A444DTV4 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00035403 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.0e-05
Identity = 25/64 (39.06%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 68  TMNESSQVQPIFFGIIFSNGFGRLQQMLNLRFVQIRITVINHIIEELTAFPYAHLHSIHS 127
           TM+ESS+V+P+   ++ S+G G L+++ +L  +++ I +++ +IE+L AFPYAHL  +  
Sbjct: 92  TMDESSEVKPVLIRVVSSDGLGGLKKVFDLGLIKVWIALVDELIEKLDAFPYAHLPLLQL 151

Query: 128 PVFF 132
           P+ F
Sbjct: 152 PILF 155

The following BLAST results are available for this feature:

BLAST of Sgr027246 vs. NCBI nr


Match Name	E-value	Identity	Description
RHN39200.1	2.1e-05	58.14	hypothetical protein MtrunA17_Chr8g0341291 [Medicago truncatula]	[more]
RRT82624.1	6.1e-05	39.06	hypothetical protein B296_00019623 [Ensete ventricosum]	[more]
RWW01553.1	6.1e-05	39.06	hypothetical protein GW17_00035403 [Ensete ventricosum] >RWW68388.1 hypothetical...	[more]

BLAST of Sgr027246 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr027246 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A396GDA3	1.0e-05	58.14	Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr8g0341291 ...	[more]
A0A427B2C3	3.0e-05	39.06	Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00019623 PE=4 SV=1	[more]
A0A444DTV4	3.0e-05	39.06	Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00035403 PE=4 SV=1	[more]

BLAST of Sgr027246 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr027246.1	Sgr027246.1	mRNA