Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGGTTTTGTCGGCGCTGTCTCCGCTGGAGAGGAACTCGAATCTCGTTTTGGCCAAGCGATGTCCAAATGGTATCACATATGTAATTTCAATTTCAGAAAAGAGATGGTTACAGCTCTGGTTGTGGTTAGTCTAGTTTTCAATCGTATCTTTAGAAAACTTGGTAGGATAATTTTTATCTCAAAGTCAGTAACATGAAATCATTTTGCTCGTGTTCTTCTGGTGTAAAGTTTTGGATCCACCACTATTTGCCAGTAACTTTATCTAATTATTAAATTTTATTTAGATGAAGGTCTGGATAAAAGAAATTAATTGAGATTTTAATGATATCTATTTGATAAACTTTGTACAGAGGGTGTGATCCTGACCGCTGGAGTGAAGGCAGCTGCAGTGGCAAGTATTGCAACTGCAATTCCAACAGTAAGTTCTTTGGTCTTGTGCTGAAGCTTTTCTTTCATCTAATTCGTGTATGTGATTTGATAATGTGAAAAACAACTCGCCAGTAAGATCTTTTTATGAATTCTCTCTCAAATTGATGTCCAGATGGCTAGTGTGAAGATGCTGCCATGGGCGAGCCAACGTCAACCTCAACCACACTGCTCAGACTCTCATAATCACCATAGGTTACTATATCCTCAACCCCATCTCTGTTACTGTATTGCTGATCTCAATGAGTTAGAATTTTTCCTGATTTTATGTGTCGATTTCTGTTTATCAGTGGCCGGAGCGACGTATTTCATCGTCACTGACAAGACTGTTTTAGCAACTGCAAGGACGAATTCCTTCAAGCCAAACTCCAACGCTGAAGCATGA
mRNA sequence
ATGGCGAAGGTTTTGTCGGCGCTGTCTCCGCTGGAGAGGAACTCGAATCTCGTTTTGGCCAAGCGATGTCCAAATGAGGGTGTGATCCTGACCGCTGGAGTGAAGGCAGCTGCAGTGGCAAGTATTGCAACTGCAATTCCAACAATGGCTAGTGTGAAGATGCTGCCATGGGCGAGCCAACGTCAACCTCAACCACACTGCTCAGACTCTCATAATCACCATAGGTTACTATATCCTCAACCCCATCTCTGTTACTGTATTGCTGATCTCAATGAGTTAGAATTTTTCCTGATTTTATGTGTCGATTTCTGTTTATCAGTGGCCGGAGCGACGTATTTCATCGTCACTGACAAGACTGTTTTAGCAACTGCAAGGACGAATTCCTTCAAGCCAAACTCCAACGCTGAAGCATGA
Coding sequence (CDS)
ATGGCGAAGGTTTTGTCGGCGCTGTCTCCGCTGGAGAGGAACTCGAATCTCGTTTTGGCCAAGCGATGTCCAAATGAGGGTGTGATCCTGACCGCTGGAGTGAAGGCAGCTGCAGTGGCAAGTATTGCAACTGCAATTCCAACAATGGCTAGTGTGAAGATGCTGCCATGGGCGAGCCAACGTCAACCTCAACCACACTGCTCAGACTCTCATAATCACCATAGGTTACTATATCCTCAACCCCATCTCTGTTACTGTATTGCTGATCTCAATGAGTTAGAATTTTTCCTGATTTTATGTGTCGATTTCTGTTTATCAGTGGCCGGAGCGACGTATTTCATCGTCACTGACAAGACTGTTTTAGCAACTGCAAGGACGAATTCCTTCAAGCCAAACTCCAACGCTGAAGCATGA
Protein sequence
MAKVLSALSPLERNSNLVLAKRCPNEGVILTAGVKAAAVASIATAIPTMASVKMLPWASQRQPQPHCSDSHNHHRLLYPQPHLCYCIADLNELEFFLILCVDFCLSVAGATYFIVTDKTVLATARTNSFKPNSNAEA
Homology
BLAST of Sgr027142 vs. NCBI nr
Match:
XP_011046280.1 (PREDICTED: early nodulin-93-like [Populus euphratica])
HSP 1 Score: 92.8 bits (229), Expect = 2.4e-15
Identity = 70/144 (48.61%), Postives = 83/144 (57.64%), Query Frame = 0
Query: 1 MAKVLSALSPLERNS------NLVLAKRCPNEGVILTAGVKAAAVASIATAIPTMASVKM 60
M+K + A SPL+RNS L +AKRC +EGV+ AG KAAA+A+IATAIPTMAS +M
Sbjct: 1 MSKKVVAESPLQRNSLASLDQKLAMAKRCSHEGVV--AGAKAAALATIATAIPTMASARM 60
Query: 61 LPWASQRQPQPHCSDSHNHHRLLYPQPHLCYCIADLNELEFFLILCVDFCLSVAGATYFI 120
LPWA A+LN LI+ +VAGA YFI
Sbjct: 61 LPWAR----------------------------ANLNHTAQALIIS-----TVAGAAYFI 109
Query: 121 VTDKTVLATARTNSFK-PNSNAEA 138
V DKTVLATAR NSFK P+SN EA
Sbjct: 121 VADKTVLATARKNSFKSPSSNIEA 109
BLAST of Sgr027142 vs. NCBI nr
Match:
XP_023916387.1 (early nodulin-93-like [Quercus suber])
HSP 1 Score: 92.4 bits (228), Expect = 3.2e-15
Identity = 72/143 (50.35%), Postives = 82/143 (57.34%), Query Frame = 0
Query: 1 MAKVLSALSPLERN------SNLVLAKRCPNEGVILTAGVKAAAVASIATAIPTMASVKM 60
MAK++ A SPLERN + L +AKRC +EGVI AG KAA VA+IATAIPTMASV+M
Sbjct: 1 MAKMV-AESPLERNNVASLDNKLAMAKRCSHEGVI--AGAKAAVVATIATAIPTMASVRM 60
Query: 61 LPWASQRQPQPHCSDSHNHHRLLYPQPHLCYCIADLNELEFFLILCVDFCLSVAGATYFI 120
LPWA A+LN LI+ +VAGA YFI
Sbjct: 61 LPWAR----------------------------ANLNHTAQALIIS-----TVAGAAYFI 107
Query: 121 VTDKTVLATARTNSFKPNSNAEA 138
V DKTVLATAR NSFK SN EA
Sbjct: 121 VADKTVLATARRNSFKQISNNEA 107
BLAST of Sgr027142 vs. NCBI nr
Match:
XP_021667711.1 (early nodulin-93-like [Hevea brasiliensis] >KAF2310680.1 hypothetical protein GH714_016221 [Hevea brasiliensis])
HSP 1 Score: 91.7 bits (226), Expect = 5.4e-15
Identity = 69/143 (48.25%), Postives = 80/143 (55.94%), Query Frame = 0
Query: 1 MAKVLSALSPLERNS------NLVLAKRCPNEGVILTAGVKAAAVASIATAIPTMASVKM 60
MAK +S SPLE+NS L +AKRC +EGV+ AG KAA VA+IATAIPT+AS +M
Sbjct: 1 MAKNVSQ-SPLEKNSLSSIDQKLAMAKRCSHEGVV--AGAKAAVVATIATAIPTLASARM 60
Query: 61 LPWASQRQPQPHCSDSHNHHRLLYPQPHLCYCIADLNELEFFLILCVDFCLSVAGATYFI 120
LPWA A+LN LI+ +VAGA YFI
Sbjct: 61 LPWAK----------------------------ANLNHTAQALIIS-----TVAGAAYFI 107
Query: 121 VTDKTVLATARTNSFKPNSNAEA 138
V DKTVLATAR NSF NSN EA
Sbjct: 121 VADKTVLATARRNSFNKNSNTEA 107
BLAST of Sgr027142 vs. NCBI nr
Match:
KAF9857721.1 (hypothetical protein H0E87_009879 [Populus deltoides])
HSP 1 Score: 91.3 bits (225), Expect = 7.1e-15
Identity = 69/144 (47.92%), Postives = 82/144 (56.94%), Query Frame = 0
Query: 1 MAKVLSALSPLERNS------NLVLAKRCPNEGVILTAGVKAAAVASIATAIPTMASVKM 60
M+K + A SPL+RNS L +AKRC +EGV+ AG KAA +A+IATAIPTMAS +M
Sbjct: 1 MSKKVVAESPLQRNSLASLDQKLAMAKRCSHEGVV--AGAKAAVLATIATAIPTMASARM 60
Query: 61 LPWASQRQPQPHCSDSHNHHRLLYPQPHLCYCIADLNELEFFLILCVDFCLSVAGATYFI 120
LPWA A+LN LI+ +VAGA YFI
Sbjct: 61 LPWAR----------------------------ANLNHTAQALIIS-----TVAGAAYFI 109
Query: 121 VTDKTVLATARTNSFK-PNSNAEA 138
V DKTVLATAR NSFK P+SN EA
Sbjct: 121 VADKTVLATARKNSFKNPSSNIEA 109
BLAST of Sgr027142 vs. NCBI nr
Match:
XP_002305557.1 (early nodulin-93 [Populus trichocarpa] >XP_034929261.1 early nodulin-93-like [Populus alba] >ABK94914.1 unknown [Populus trichocarpa] >KAG6779730.1 hypothetical protein POTOM_016125 [Populus tomentosa] >PNT41952.1 hypothetical protein POPTR_004G184000 [Populus trichocarpa])
HSP 1 Score: 91.3 bits (225), Expect = 7.1e-15
Identity = 69/144 (47.92%), Postives = 82/144 (56.94%), Query Frame = 0
Query: 1 MAKVLSALSPLERNS------NLVLAKRCPNEGVILTAGVKAAAVASIATAIPTMASVKM 60
M+K + A SPL+RNS L +AKRC +EGV+ AG KAA +A+IATAIPTMAS +M
Sbjct: 1 MSKKVVAESPLQRNSLASLDQKLAMAKRCSHEGVV--AGAKAAVLATIATAIPTMASARM 60
Query: 61 LPWASQRQPQPHCSDSHNHHRLLYPQPHLCYCIADLNELEFFLILCVDFCLSVAGATYFI 120
LPWA A+LN LI+ +VAGA YFI
Sbjct: 61 LPWAR----------------------------ANLNHTAQALIIS-----TVAGAAYFI 109
Query: 121 VTDKTVLATARTNSFK-PNSNAEA 138
V DKTVLATAR NSFK P+SN EA
Sbjct: 121 VADKTVLATARKNSFKSPSSNIEA 109
BLAST of Sgr027142 vs. ExPASy Swiss-Prot
Match:
Q02921 (Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1)
HSP 1 Score: 80.1 bits (196), Expect = 2.1e-14
Identity = 61/135 (45.19%), Postives = 71/135 (52.59%), Query Frame = 0
Query: 9 SPLERNS------NLVLAKRCPNEGVILTAGVKAAAVASIATAIPTMASVKMLPWASQRQ 68
SPLER S L AKRC +EGV+ AG KAA VAS+A+AIPT+ASV+MLPWA
Sbjct: 6 SPLERPSLASLDQKLAFAKRCSHEGVL--AGAKAAVVASVASAIPTLASVRMLPWAR--- 65
Query: 69 PQPHCSDSHNHHRLLYPQPHLCYCIADLNELEFFLILCVDFCLSVAGATYFIVTDKTVLA 128
A+LN LI+ + A YFIV DKTVLA
Sbjct: 66 -------------------------ANLNHTAQALIIS-----TATAAAYFIVADKTVLA 105
Query: 129 TARTNSFKPNSNAEA 138
TAR NSF SN+EA
Sbjct: 126 TARKNSFNQPSNSEA 105
BLAST of Sgr027142 vs. ExPASy TrEMBL
Match:
A0A6A6MAJ7 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_016221 PE=4 SV=1)
HSP 1 Score: 91.7 bits (226), Expect = 2.6e-15
Identity = 69/143 (48.25%), Postives = 80/143 (55.94%), Query Frame = 0
Query: 1 MAKVLSALSPLERNS------NLVLAKRCPNEGVILTAGVKAAAVASIATAIPTMASVKM 60
MAK +S SPLE+NS L +AKRC +EGV+ AG KAA VA+IATAIPT+AS +M
Sbjct: 1 MAKNVSQ-SPLEKNSLSSIDQKLAMAKRCSHEGVV--AGAKAAVVATIATAIPTLASARM 60
Query: 61 LPWASQRQPQPHCSDSHNHHRLLYPQPHLCYCIADLNELEFFLILCVDFCLSVAGATYFI 120
LPWA A+LN LI+ +VAGA YFI
Sbjct: 61 LPWAK----------------------------ANLNHTAQALIIS-----TVAGAAYFI 107
Query: 121 VTDKTVLATARTNSFKPNSNAEA 138
V DKTVLATAR NSF NSN EA
Sbjct: 121 VADKTVLATARRNSFNKNSNTEA 107
BLAST of Sgr027142 vs. ExPASy TrEMBL
Match:
A9PEW1 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G184000 PE=2 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 3.4e-15
Identity = 69/144 (47.92%), Postives = 82/144 (56.94%), Query Frame = 0
Query: 1 MAKVLSALSPLERNS------NLVLAKRCPNEGVILTAGVKAAAVASIATAIPTMASVKM 60
M+K + A SPL+RNS L +AKRC +EGV+ AG KAA +A+IATAIPTMAS +M
Sbjct: 1 MSKKVVAESPLQRNSLASLDQKLAMAKRCSHEGVV--AGAKAAVLATIATAIPTMASARM 60
Query: 61 LPWASQRQPQPHCSDSHNHHRLLYPQPHLCYCIADLNELEFFLILCVDFCLSVAGATYFI 120
LPWA A+LN LI+ +VAGA YFI
Sbjct: 61 LPWAR----------------------------ANLNHTAQALIIS-----TVAGAAYFI 109
Query: 121 VTDKTVLATARTNSFK-PNSNAEA 138
V DKTVLATAR NSFK P+SN EA
Sbjct: 121 VADKTVLATARKNSFKSPSSNIEA 109
BLAST of Sgr027142 vs. ExPASy TrEMBL
Match:
A0A6P4B8U4 (early nodulin-93-like OS=Ziziphus jujuba OX=326968 GN=LOC107429095 PE=4 SV=1)
HSP 1 Score: 90.9 bits (224), Expect = 4.5e-15
Identity = 67/138 (48.55%), Postives = 77/138 (55.80%), Query Frame = 0
Query: 6 SALSPLERNS------NLVLAKRCPNEGVILTAGVKAAAVASIATAIPTMASVKMLPWAS 65
+A SPLERNS L +AKRC +EGV AG KAA +ASIATAIPT+ASV+MLPWA
Sbjct: 5 TAQSPLERNSLASLDQRLAMAKRCSHEGV--KAGAKAAVLASIATAIPTLASVRMLPWAK 64
Query: 66 QRQPQPHCSDSHNHHRLLYPQPHLCYCIADLNELEFFLILCVDFCLSVAGATYFIVTDKT 125
A LN LI+ +VAGA YFIV DKT
Sbjct: 65 ----------------------------AHLNHTAQALIIS-----TVAGAAYFIVADKT 107
Query: 126 VLATARTNSFKPNSNAEA 138
VLATAR NSFK ++N EA
Sbjct: 125 VLATARRNSFKHHTNVEA 107
BLAST of Sgr027142 vs. ExPASy TrEMBL
Match:
A3FGC9 (Early nodulin 93 protein OS=Populus alba x Populus glandulosa OX=153471 GN=enod93 PE=2 SV=1)
HSP 1 Score: 90.9 bits (224), Expect = 4.5e-15
Identity = 69/144 (47.92%), Postives = 81/144 (56.25%), Query Frame = 0
Query: 1 MAKVLSALSPLERNS------NLVLAKRCPNEGVILTAGVKAAAVASIATAIPTMASVKM 60
M+K + A SPL+RNS L +AKRC +EGV+ AG KAA +A+IATAIPTMAS +M
Sbjct: 1 MSKKVVAESPLQRNSLASLDQKLAMAKRCSHEGVV--AGAKAAVLATIATAIPTMASARM 60
Query: 61 LPWASQRQPQPHCSDSHNHHRLLYPQPHLCYCIADLNELEFFLILCVDFCLSVAGATYFI 120
LPWA A+LN LI+ +VAGA YFI
Sbjct: 61 LPWAR----------------------------ANLNHTAQALIIS-----TVAGAAYFI 109
Query: 121 VTDKTVLATARTNSFK-PNSNAEA 138
V DKTVLATAR NSFK P SN EA
Sbjct: 121 VADKTVLATARKNSFKSPRSNIEA 109
BLAST of Sgr027142 vs. ExPASy TrEMBL
Match:
A0A5N5LI61 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_014630 PE=4 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 5.9e-15
Identity = 68/144 (47.22%), Postives = 83/144 (57.64%), Query Frame = 0
Query: 1 MAKVLSALSPLERNS------NLVLAKRCPNEGVILTAGVKAAAVASIATAIPTMASVKM 60
M+K + A SPL+RNS L +AKRC +EGV+ AG KAAA+A+IATAIPT+AS +M
Sbjct: 2 MSKNVVAQSPLQRNSVASLDQKLAMAKRCSHEGVV--AGAKAAALATIATAIPTLASARM 61
Query: 61 LPWASQRQPQPHCSDSHNHHRLLYPQPHLCYCIADLNELEFFLILCVDFCLSVAGATYFI 120
LPWA A+LN LI+ +VAGA YFI
Sbjct: 62 LPWAR----------------------------ANLNHTAQALIIS-----TVAGAAYFI 110
Query: 121 VTDKTVLATARTNSFK-PNSNAEA 138
V DKTVLATAR NSF+ P+SN EA
Sbjct: 122 VADKTVLATARKNSFRNPSSNREA 110
BLAST of Sgr027142 vs. TAIR 10
Match:
AT5G25940.1 (early nodulin-related )
HSP 1 Score: 43.9 bits (102), Expect = 1.2e-04
Identity = 35/97 (36.08%), Postives = 47/97 (48.45%), Query Frame = 0
Query: 32 AGVKAAAVASIATAIPTMASVKMLPWASQRQPQPHCSDSHNHHRLLYPQPHLCYCIADLN 91
AG KAAAVA++A+AIPT+A+V+M PWA A+LN
Sbjct: 40 AGAKAAAVAAVASAIPTVAAVRMFPWAK----------------------------ANLN 99
Query: 92 ELEFFLILCVDFCLSVAGATYFIVTDKTVLATARTNS 129
LI+ S + A +FI DKT+L AR N+
Sbjct: 100 YTAQALIIS-----SASIAAFFITADKTILQGARRNT 103
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_011046280.1 | 2.4e-15 | 48.61 | PREDICTED: early nodulin-93-like [Populus euphratica] | [more] |
| XP_023916387.1 | 3.2e-15 | 50.35 | early nodulin-93-like [Quercus suber] | [more] |
| XP_021667711.1 | 5.4e-15 | 48.25 | early nodulin-93-like [Hevea brasiliensis] >KAF2310680.1 hypothetical protein GH... | [more] |
| KAF9857721.1 | 7.1e-15 | 47.92 | hypothetical protein H0E87_009879 [Populus deltoides] | [more] |
| XP_002305557.1 | 7.1e-15 | 47.92 | early nodulin-93 [Populus trichocarpa] >XP_034929261.1 early nodulin-93-like [Po... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q02921 | 2.1e-14 | 45.19 | Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6A6MAJ7 | 2.6e-15 | 48.25 | Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_016221 PE=4 SV=1 | [more] |
| A9PEW1 | 3.4e-15 | 47.92 | Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G184000 PE=2 ... | [more] |
| A0A6P4B8U4 | 4.5e-15 | 48.55 | early nodulin-93-like OS=Ziziphus jujuba OX=326968 GN=LOC107429095 PE=4 SV=1 | [more] |
| A3FGC9 | 4.5e-15 | 47.92 | Early nodulin 93 protein OS=Populus alba x Populus glandulosa OX=153471 GN=enod9... | [more] |
| A0A5N5LI61 | 5.9e-15 | 47.22 | Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_014630 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G25940.1 | 1.2e-04 | 36.08 | early nodulin-related | [more] |
