Sgr026741 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr026741
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Potassium-transporting ATPase C chain
Location	tig00153033: 3225695 .. 3226006 (+)
RNA-Seq Expression	Sgr026741
Synteny	Sgr026741

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGCGTGGATGACTTCGCTGTTGCGAGAACTGGTGCCGGTACCGAAGGTGGGAGCAGATTCTAGCACCAAAACATCTCTGCCTCTGAGAGAAAGCTCCCTCGCCACCGCTAGTCCGACCACCCCCGCCCCGATCACGACGCAGTCCACCTTCTCTTTGACCATATCGCCAGCCATTGATGATATCTTCTTCATCATGCCTGCTCTTCCCCGCAAGCTTCGAACAGCAAGCTTCAGCATCTTCTACTTCTTCTTCTTCTCCCGCTTTCACCACCTCCGAGTCTCCTCGCCTTCTCCGATACTCAGTTGA

mRNA sequence

ATGCCGGCGTGGATGACTTCGCTGTTGCGAGAACTGGTGCCGGTACCGAAGGTGGGAGCAGATTCTAGCACCAAAACATCTCTGCCTCTGAGAGAAAGCTCCCTCGCCACCGCTAGTCCGACCACCCCCGCCCCGATCACGACGCAGTCCACCTTCTCTTTGACCATATCGCCAGCCATTGATGATATCTTCTTCATCATGCCTGCTCTTCCCCGCAAGCTTCGAACAGCAAGCTTCAGCATCTTCTACTTCTTCTTCTTCTCCCGCTTTCACCACCTCCGAGTCTCCTCGCCTTCTCCGATACTCAGTTGA

Coding sequence (CDS)

ATGCCGGCGTGGATGACTTCGCTGTTGCGAGAACTGGTGCCGGTACCGAAGGTGGGAGCAGATTCTAGCACCAAAACATCTCTGCCTCTGAGAGAAAGCTCCCTCGCCACCGCTAGTCCGACCACCCCCGCCCCGATCACGACGCAGTCCACCTTCTCTTTGACCATATCGCCAGCCATTGATGATATCTTCTTCATCATGCCTGCTCTTCCCCGCAAGCTTCGAACAGCAAGCTTCAGCATCTTCTACTTCTTCTTCTTCTCCCGCTTTCACCACCTCCGAGTCTCCTCGCCTTCTCCGATACTCAGTTGA

Protein sequence

MPAWMTSLLRELVPVPKVGADSSTKTSLPLRESSLATASPTTPAPITTQSTFSLTISPAIDDIFFIMPALPRKLRTASFSIFYFFFFSRFHHLRVSSPSPILS

Homology

[Close]

BLAST of Sgr026741 vs. NCBI nr
Match: GER52532.1 (potassium-transporting ATPase C chain [Striga asiatica])

HSP 1 Score: 62.4 bits (150), Expect = 2.7e-06
Identity = 39/55 (70.91%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 5  MTSLLRELVPVPKVGADSSTKTSLP-LRESSLATASPTTPAPITTQSTFSLTISP 59
          MTSLLREL PVPKVG DS+T TSLP    SS ATA PTTPAPITT S  SL   P
Sbjct: 1  MTSLLRELEPVPKVGPDSTTTTSLPSFTASSRATAKPTTPAPITTTSASSLGTDP 55

[Close]

BLAST of Sgr026741 vs. ExPASy TrEMBL
Match: A0A7C9CZ59 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.3e-16
Identity = 51/54 (94.44%), Postives = 51/54 (94.44%), Query Frame = 0


Query: 1  MPAWMTSLLRELVPVPKVGADSSTKTSLPLRESSLATASPTTPAPITTQSTFSL 55
          MPAWMTSLLRELVPVPKVGADSSTKTSLPL  SSLATA PTTPAPITTQSTFSL
Sbjct: 1  MPAWMTSLLRELVPVPKVGADSSTKTSLPLSASSLATAIPTTPAPITTQSTFSL 54

[Close]

BLAST of Sgr026741 vs. ExPASy TrEMBL
Match: A0A5A7R549 (Potassium-transporting ATPase C chain OS=Striga asiatica OX=4170 GN=STAS_29981 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06
Identity = 39/55 (70.91%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 5  MTSLLRELVPVPKVGADSSTKTSLP-LRESSLATASPTTPAPITTQSTFSLTISP 59
          MTSLLREL PVPKVG DS+T TSLP    SS ATA PTTPAPITT S  SL   P
Sbjct: 1  MTSLLRELEPVPKVGPDSTTTTSLPSFTASSRATAKPTTPAPITTTSASSLGTDP 55

The following BLAST results are available for this feature:

BLAST of Sgr026741 vs. NCBI nr


Match Name	E-value	Identity	Description
GER52532.1	2.7e-06	70.91	potassium-transporting ATPase C chain [Striga asiatica]	[more]

BLAST of Sgr026741 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr026741 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7C9CZ59	2.3e-16	94.44	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]
A0A5A7R549	1.3e-06	70.91	Potassium-transporting ATPase C chain OS=Striga asiatica OX=4170 GN=STAS_29981 P...	[more]

BLAST of Sgr026741 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr026741.1	Sgr026741.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane