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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGATCTGCCGATGTTGGTTTCAGAGAAGAAGAGTCGGGGAAGTTGAGGCGGGCAAAAGGGCCATACATGGCTTTAGCAGCTTCATCATAAGCAAGAGCAGCCTGCCGAGCAGTAGCGAAAGTGCCAAGCCAGAGGCGAGTGCCTTTCTTCTTCACACGGGTGCTGGCAATCGGCTCTCGAATCTCAGCCACCCACTTGCCCCAAGTCCTCTGCCGAACGCCTCTGAAGTTGCAGTCTGA mRNA sequence ATGATCTGCCGATGTTGGTTTCAGAGAAGAAGAGTCGGGGAAGTTGAGGCGGGCAAAAGGGCCATACATGGCTTTAGCAGCTTCATCATAAGCAAGAGCAGCCTGCCGAGCAGTAGCGAAAGTGCCAAGCCAGAGGCGAGTGCCTTTCTTCTTCACACGGGTGCTGGCAATCGGCTCTCGAATCTCAGCCACCCACTTGCCCCAAGTCCTCTGCCGAACGCCTCTGAAGTTGCAGTCTGA Coding sequence (CDS) ATGATCTGCCGATGTTGGTTTCAGAGAAGAAGAGTCGGGGAAGTTGAGGCGGGCAAAAGGGCCATACATGGCTTTAGCAGCTTCATCATAAGCAAGAGCAGCCTGCCGAGCAGTAGCGAAAGTGCCAAGCCAGAGGCGAGTGCCTTTCTTCTTCACACGGGTGCTGGCAATCGGCTCTCGAATCTCAGCCACCCACTTGCCCCAAGTCCTCTGCCGAACGCCTCTGAAGTTGCAGTCTGA Protein sequence MICRCWFQRRRVGEVEAGKRAIHGFSSFIISKSSLPSSSESAKPEASAFLLHTGAGNRLSNLSHPLAPSPLPNASEVAV
Homology
BLAST of Sgr026625 vs. NCBI nr
Match: ESQ40457.1 (hypothetical protein EUTSA_v10013927mg [Eutrema salsugineum]) HSP 1 Score: 56.2 bits (134), Expect = 1.5e-04 Identity = 34/77 (44.16%), Postives = 45/77 (58.44%), Query Frame = 0
Query: 2 ICRCWFQRRRVG--EVEAGKRAIHGFSSFIISKSSLPSSSESAKPEASAFLLHTGAGNRL 61
+ RC R G EV+ G+ +HGFS +IS+ S S ESAKP+ +A + L
Sbjct: 72 LTRCTRDIRHSGLREVKTGRWTVHGFSRLVISRGSFFSGRESAKPKPTASIW-------L 131
Query: 62 SNLSHPLAPSPLPNASE 77
SNLS P P+PLPN+SE
Sbjct: 132 SNLSDPFTPNPLPNSSE 141
BLAST of Sgr026625 vs. ExPASy TrEMBL
Match: V4LDH3 (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10013927mg PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.1e-05 Identity = 34/77 (44.16%), Postives = 45/77 (58.44%), Query Frame = 0
Query: 2 ICRCWFQRRRVG--EVEAGKRAIHGFSSFIISKSSLPSSSESAKPEASAFLLHTGAGNRL 61
+ RC R G EV+ G+ +HGFS +IS+ S S ESAKP+ +A + L
Sbjct: 72 LTRCTRDIRHSGLREVKTGRWTVHGFSRLVISRGSFFSGRESAKPKPTASIW-------L 131
Query: 62 SNLSHPLAPSPLPNASE 77
SNLS P P+PLPN+SE
Sbjct: 132 SNLSDPFTPNPLPNSSE 141
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| ESQ40457.1 | 1.5e-04 | 44.16 | hypothetical protein EUTSA_v10013927mg [Eutrema salsugineum] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| V4LDH3 | 7.1e-05 | 44.16 | Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10013927mg PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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