Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAACAACAACAAAGAAGAGCCGAAGACCGCGCCCCAATCCGATCGGTGGTATAACCTATCACTCGGTCCTTCCTTCAAGGACGAATCCTCCAACAAATTCTGTACTCTCCGGTGTAAGTAATTCGAATTGATCCCAAATCTAACACAATCCCGATTGGTGTAATTCGTTTGCCGCGAAACTGCGGGATGTGGAAAATCGGTTTTTGTCTTTTAGCTTTTTTCTGTCAAAATGTTGGAATTGTTTACGCATTGTGGTTTCAGATGAATTTAAACCGGCGTCGATCGATAAAACGAAGCCGGGATCGCTGAAGAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAGAACAACCAATTGGGGAAACCCAATGTGGCGTTTGTTGGTAGTAGTGAGGATTATAAGGAAAATGATGCCGTTTTGTTTTTTGATGGCGAGACATTCCGGTTGGAGCGGCTGCATCGGGCGGTCAAGCAACTCCGGCACCTTCGACAGCCGGGCGAATCCGCTGCCGCTGGCGTTGCCGCCACGTCCACTACCGCTTCTGTCCCTCATTCTCTGACGGCACCGGAGCCTCGGTTATCTCCTCCTGTGGCTAAAGTTGCCAAACCAATGCATATGGGTCGAAGCAGTTTTCCGCCAGTGCCGGTGAGTGAGAGCTCTTTAAGGTTTATTTCCTATTACATAAACTGTTCTGCGCTGTAAACTTTGATCAAATAGAAAAATGTTCAAACTTCTAATACTGAAAGAAATATTTTGTTAACTTTCTAGTTTCTGTCAGCCAAGAATCTCATGTTTATTCGATATATTTTACTCTTAACAAACGAGGAGCAAAGATTTGAGAAAATACGGCGAGTGGTTAACAGTTTCATTATTGAAAAATACAGCTAAACCTTGTAGTATGTTAAGTACTCGATCGTGTACTTTTAAACGCCAGCTAAACCTTCGTTGAACTTTCTTCTCTCTCTGTGTCTCTCTTCATTGTTCTAATACGCTCAGCATTTACAGGTAGAGGTGGAAAGAATAGATATTGGAGAGCCAGCAAATACAGGTCAATATGCTTCTCTGGTTCTATTACAACTGTTTTGGATTTTGGTATGTTCTTTGTGGTAATAAGTTGGCTGTCCATCTCCATGGTATTTGCTTATTTTGTAAAGATTTCAGAGCAAACACTACCTATGATTTCAAAATTGGATCCTACTACCTTATCCATTGTGTTTGTTTTATAATTTCACTTCTCAATTTTCTGCCTTGTTGGTGTCTTAGTTTACAGCATGCAGTTTTTCTTAACGAGAAACCATGCCTTTCATTGAAAAAAATGAAAGAATACAAAAGGCAATACAACAAAAAAAACAAAAAAAAGAGAGAGAAAGCCCATGATGAAAGGAGCCTTGGTTACAGAAAGTTATGAAAAGGGCTCCAATTGTTGAGAATATGAGATTAAGGATAATGACAAAAGAAACCTTGGTCACCGAAATCCAAAGAGAGTAGCCATGCAGTTAGCTTGTACCTGTATACTTGTAGTCGATATGGGAGTAGAGTTATGACGCGTAGGGTGATCTTAAGTTCTTGAGTGAGATATGTTAATATATTGTAACTTTTTACTTTATCTCTTAGCCTTATTTTGGGAAGTTTCTATTTCTCAATATCAAGATGATTGCTGGTCTAGAGGTAATGTCGTCTGCAAGATTCAGTTCTTACAGGACTCTTGCATCATTCCTAGCAGGAGAAAAGTTAAAAAAGAAATGCACTTTAATTGATTATTTGTTGTTTGAAAATTTGAACTATTCATCCGACCTTTTAGTAATTATTTGTTTATATGTACTTTCCTTTTAGTTTTTAGATTCTTGTTTAATTTTATGGACAATGATTTGATGGTATGGCCTAACATATTGACAACCTGTTTTACACAGGAGACAAGGCCAAACTACATATTCATATTTAATAGCATTAGTAGCTTCATTATGTTCGGCAAACCTCGAAATTTTTTTGCTAGATGTCTTTCAATGCATTTGTTAAAACACCGTTCCTCCCAGAAATTAGTACGTCCTTTTCAGAATTTCAGATTTATTCGATGATCCTATTTATGATTCCACAAGTGGGCTTTCTGCCAATAGGATGTTGAACAAACTTCAGAATGTCTTACGGGATGAAATATAGATCTTTCAGCTACATTTTTGCGACGTTCTTGCTATTGGGTTGTTAATAAGTAGATAAAATGCCCCCTCTGGTGGCTTCTCTTTTTGAAATTAGGAGGGCTTCATCCAACAAAGTGGTGTCTAGTTTGTTCCATCAGCAGCAACTTTAATCGTTATCAGAGGGTCATTTGTGTATTATTGCTGTTTAATAGCATTTTAAACTCATATTCCTGTTTTTTCCCCCAAAAATTTGTTGGCTGAGAAACAGCAGAATCTTTTAACTTCAGAATATGGTTCTTGCTTAGCTAAACCATTTCTGTCTTCTCATGATCTCTGATGTTTCTTGAAGTGTTCCAACTCAAAAAGGGCTCCTGTTTTAATTAAATCTTTGAATCTGAACTAGTGAACATTCAATTGATGAATGTTCTAATTATTTTCTTTGATACCTCTAACTTTAATATGTTTATGCTCATGGCAGGTGCAAAATCTGTTGCTGCTAGTAAAGGGCCTGCTGATTACTCATCAGATCCACCAAATGTTTCTGCTTCCTCGCCGAGCCCCAAGAATGATGATGAGCATCAAGATATAGATATTGATGAAATTTTTGGGTCTGTATCATCTGATGATGGAAATAACGCCGAAGAAGAAAAAGTTGACGTCGGATTCGATATGAATGTACCACATCAGAACGATACCGATGATGAGATTGCTGATGTGGATGATAGCGGTGACGAAGCTGAGAAGGGTCCTAATGCTGCAGAAGCCCTCCGAGCTCAGGTGAATGCAGAGGGTAGGGACGACCAGACTTCGAGTTCTAGTAGCAGCGAATCGGGCAGTGGCAGCAGCAGCGGAAGTAGCAGCGGCAGCAGTGACAGTGATGGCAGCGATGAGGACTCAGTTACCTCAATCTGA
mRNA sequence
ATGGCGAACAACAACAAAGAAGAGCCGAAGACCGCGCCCCAATCCGATCGGTGGTATAACCTATCACTCGGTCCTTCCTTCAAGGACGAATCCTCCAACAAATTCTGTACTCTCCGGTATGAATTTAAACCGGCGTCGATCGATAAAACGAAGCCGGGATCGCTGAAGAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAGAACAACCAATTGGGGAAACCCAATGTGGCGTTTGTTGGTAGTAGTGAGGATTATAAGGAAAATGATGCCGTTTTGTTTTTTGATGGCGAGACATTCCGGTTGGAGCGGCTGCATCGGGCGGTCAAGCAACTCCGGCACCTTCGACAGCCGGGCGAATCCGCTGCCGCTGGCGTTGCCGCCACGTCCACTACCGCTTCTGTCCCTCATTCTCTGACGGCACCGGAGCCTCGGTTATCTCCTCCTGTGGCTAAAGTTGCCAAACCAATGCATATGGGTCGAAGCAGTTTTCCGCCAGTGCCGGTAGAGGTGGAAAGAATAGATATTGGAGAGCCAGCAAATACAGGTGCAAAATCTGTTGCTGCTAGTAAAGGGCCTGCTGATTACTCATCAGATCCACCAAATGTTTCTGCTTCCTCGCCGAGCCCCAAGAATGATGATGAGCATCAAGATATAGATATTGATGAAATTTTTGGGTCTGTATCATCTGATGATGGAAATAACGCCGAAGAAGAAAAAGTTGACGTCGGATTCGATATGAATGTACCACATCAGAACGATACCGATGATGAGATTGCTGATGTGGATGATAGCGGTGACGAAGCTGAGAAGGGTCCTAATGCTGCAGAAGCCCTCCGAGCTCAGGTGAATGCAGAGGGTAGGGACGACCAGACTTCGAGTTCTAGTAGCAGCGAATCGGGCAGTGGCAGCAGCAGCGGAAGTAGCAGCGGCAGCAGTGACAGTGATGGCAGCGATGAGGACTCAGTTACCTCAATCTGA
Coding sequence (CDS)
ATGGCGAACAACAACAAAGAAGAGCCGAAGACCGCGCCCCAATCCGATCGGTGGTATAACCTATCACTCGGTCCTTCCTTCAAGGACGAATCCTCCAACAAATTCTGTACTCTCCGGTATGAATTTAAACCGGCGTCGATCGATAAAACGAAGCCGGGATCGCTGAAGAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAGAACAACCAATTGGGGAAACCCAATGTGGCGTTTGTTGGTAGTAGTGAGGATTATAAGGAAAATGATGCCGTTTTGTTTTTTGATGGCGAGACATTCCGGTTGGAGCGGCTGCATCGGGCGGTCAAGCAACTCCGGCACCTTCGACAGCCGGGCGAATCCGCTGCCGCTGGCGTTGCCGCCACGTCCACTACCGCTTCTGTCCCTCATTCTCTGACGGCACCGGAGCCTCGGTTATCTCCTCCTGTGGCTAAAGTTGCCAAACCAATGCATATGGGTCGAAGCAGTTTTCCGCCAGTGCCGGTAGAGGTGGAAAGAATAGATATTGGAGAGCCAGCAAATACAGGTGCAAAATCTGTTGCTGCTAGTAAAGGGCCTGCTGATTACTCATCAGATCCACCAAATGTTTCTGCTTCCTCGCCGAGCCCCAAGAATGATGATGAGCATCAAGATATAGATATTGATGAAATTTTTGGGTCTGTATCATCTGATGATGGAAATAACGCCGAAGAAGAAAAAGTTGACGTCGGATTCGATATGAATGTACCACATCAGAACGATACCGATGATGAGATTGCTGATGTGGATGATAGCGGTGACGAAGCTGAGAAGGGTCCTAATGCTGCAGAAGCCCTCCGAGCTCAGGTGAATGCAGAGGGTAGGGACGACCAGACTTCGAGTTCTAGTAGCAGCGAATCGGGCAGTGGCAGCAGCAGCGGAAGTAGCAGCGGCAGCAGTGACAGTGATGGCAGCGATGAGGACTCAGTTACCTCAATCTGA
Protein sequence
MANNNKEEPKTAPQSDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGESAAAGVAATSTTASVPHSLTAPEPRLSPPVAKVAKPMHMGRSSFPPVPVEVERIDIGEPANTGAKSVAASKGPADYSSDPPNVSASSPSPKNDDEHQDIDIDEIFGSVSSDDGNNAEEEKVDVGFDMNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI
Homology
BLAST of Sgr025933 vs. NCBI nr
Match:
XP_022993461.1 (ELL-associated factor 1 [Cucurbita maxima] >XP_023551438.1 ELL-associated factor 1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 528.9 bits (1361), Expect = 3.2e-146
Identity = 295/345 (85.51%), Postives = 309/345 (89.57%), Query Frame = 0
Query: 1 MANNNKEEPKTAPQSDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
MANNNKEEPKTAPQ DRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKE
Sbjct: 1 MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
Query: 61 NRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
NRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61 NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
Query: 121 SAAAGV-AATSTTASVPHSLTAPEPRLSPPVAKVAKPMHMGRSSFPPVPVEVERIDIGEP 180
S+AAGV AA+ST+AS HSLT PEPRLSPP AKV KPMHMGR SFP V VEVE+IDIGEP
Sbjct: 121 SSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180
Query: 181 ANTGAKSVAASKGPADYSSDPPNVSASSPSPKNDDEHQDIDIDEIFGSVSSDDGNNAEEE 240
NTGAKSV ASKGPADYSSDPPNVSA SP PKNDDEHQDIDID+IFGSVSSDD NNAEE+
Sbjct: 181 GNTGAKSVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDENNAEED 240
Query: 241 KVDVGFDMNVPHQNDTDDEIADVDDSGDEAEKGPNAAE------------------ALRA 300
KVD GFD+NVPH NDTDDEIADVDDSGDEAEKGPNAAE ALRA
Sbjct: 241 KVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA 300
Query: 301 QVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI 327
QVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDS+G+DEDSVTSI
Sbjct: 301 QVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 345
BLAST of Sgr025933 vs. NCBI nr
Match:
XP_038893321.1 (ELL-associated factor 2-like [Benincasa hispida])
HSP 1 Score: 526.6 bits (1355), Expect = 1.6e-145
Identity = 300/358 (83.80%), Postives = 310/358 (86.59%), Query Frame = 0
Query: 1 MANNNKEEPKTAPQSDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
MANNNKEEPKTAPQ DRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE
Sbjct: 1 MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
Query: 61 NRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
NRVTVEFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61 NRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
Query: 121 SAAA---------GVAATSTT-----ASVPHSLTAPEPRLSPPVAKVAKPMHMGRSSFPP 180
SAAA GVAA +TT AS HSLT PEPRLSPPVAKVAKPMHMGR SFP
Sbjct: 121 SAAAAAAAPPTTTGVAAPATTSTSGVASALHSLTPPEPRLSPPVAKVAKPMHMGRGSFPT 180
Query: 181 VPVEVERIDIGEPANTGAKSVAASKGPADYSSDPPNVSASSPSPKNDDEHQDIDIDEIFG 240
+PVEVERIDIGEP NTGAKSV ASKG ADYSSDPPNVSASSP KNDDEHQDIDID++FG
Sbjct: 181 MPVEVERIDIGEPGNTGAKSVVASKGLADYSSDPPNVSASSPGLKNDDEHQDIDIDDLFG 240
Query: 241 SVSSDDGNNAEEEKVDVGFDMNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVN-- 300
SV SDDGNNAEEE+V+ GFD+N+PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVN
Sbjct: 241 SVLSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE 300
Query: 301 ----------------AEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI 327
AEGRDDQ+SSSSSS SGSGSSSGSSSGSSDS+GSDEDSVTSI
Sbjct: 301 GREGPTAAAALRAQVDAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI 358
BLAST of Sgr025933 vs. NCBI nr
Match:
KAG6579241.1 (Ell-associated factor Eaf, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 524.6 bits (1350), Expect = 6.0e-145
Identity = 293/345 (84.93%), Postives = 307/345 (88.99%), Query Frame = 0
Query: 1 MANNNKEEPKTAPQSDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
MANNNKEEPKTAPQ DRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKE
Sbjct: 1 MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
Query: 61 NRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
NRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61 NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
Query: 121 SAAAGVA-ATSTTASVPHSLTAPEPRLSPPVAKVAKPMHMGRSSFPPVPVEVERIDIGEP 180
S+AA VA A+ST+AS HSLT PEPRLSPP AKV KPMHMGR SFP V VEVE+IDIGEP
Sbjct: 121 SSAAAVAVASSTSASAIHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180
Query: 181 ANTGAKSVAASKGPADYSSDPPNVSASSPSPKNDDEHQDIDIDEIFGSVSSDDGNNAEEE 240
NTGAK V ASKGPADYSSDPPNVSA SP PKNDDEHQDIDID+IFGSVSSDD NNAEE+
Sbjct: 181 GNTGAKPVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDENNAEED 240
Query: 241 KVDVGFDMNVPHQNDTDDEIADVDDSGDEAEKGPNAAE------------------ALRA 300
KVD GFD+NVPH NDTDDEIADVDDSGDEAEKGPNAAE ALRA
Sbjct: 241 KVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA 300
Query: 301 QVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI 327
QVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDS+G+DEDSVTSI
Sbjct: 301 QVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 345
BLAST of Sgr025933 vs. NCBI nr
Match:
XP_022939831.1 (ELL-associated factor 1 [Cucurbita moschata] >KAG7016756.1 Ell-associated factor Eaf [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 524.6 bits (1350), Expect = 6.0e-145
Identity = 293/345 (84.93%), Postives = 307/345 (88.99%), Query Frame = 0
Query: 1 MANNNKEEPKTAPQSDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
MANNNKEEPKTAPQ DRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKE
Sbjct: 1 MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
Query: 61 NRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
NRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61 NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
Query: 121 SAAAGV-AATSTTASVPHSLTAPEPRLSPPVAKVAKPMHMGRSSFPPVPVEVERIDIGEP 180
S+AA V AA+ST+AS HSLT PEPRLSPP AKV KPMHMGR SFP V VEVE+IDIGEP
Sbjct: 121 SSAAAVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180
Query: 181 ANTGAKSVAASKGPADYSSDPPNVSASSPSPKNDDEHQDIDIDEIFGSVSSDDGNNAEEE 240
NTGAK V ASKGPADYSSDPPNVSA SP PKNDDEHQDIDID+IFGSVSSDD NNAEE+
Sbjct: 181 GNTGAKPVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDENNAEED 240
Query: 241 KVDVGFDMNVPHQNDTDDEIADVDDSGDEAEKGPNAAE------------------ALRA 300
KVD GFD+NVPH NDTDDEIADVDDSGDEAEKGPNAAE ALRA
Sbjct: 241 KVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA 300
Query: 301 QVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI 327
QVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDS+G+DEDSVTSI
Sbjct: 301 QVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 345
BLAST of Sgr025933 vs. NCBI nr
Match:
XP_022151706.1 (ELL-associated factor 1 [Momordica charantia] >XP_022151707.1 ELL-associated factor 1 [Momordica charantia] >XP_022151708.1 ELL-associated factor 1 [Momordica charantia] >XP_022151709.1 ELL-associated factor 1 [Momordica charantia])
HSP 1 Score: 519.6 bits (1337), Expect = 1.9e-143
Identity = 290/328 (88.41%), Postives = 300/328 (91.46%), Query Frame = 0
Query: 1 MANNNKEEPKTAPQSDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
MAN+NKEEPKTAPQS+RWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTK+
Sbjct: 1 MANDNKEEPKTAPQSERWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKD 60
Query: 61 NRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
NRVTVEFQNNQLG+PNVAFVGSSED KENDAVLFFDGETFRLERLHRAV LRH+RQ E
Sbjct: 61 NRVTVEFQNNQLGRPNVAFVGSSEDCKENDAVLFFDGETFRLERLHRAVTHLRHVRQADE 120
Query: 121 SAAAGVAATSTTASVPHSLTAPEPRLSPPVAKVAKPMHMGRSSFPPVPVEVERIDIGEPA 180
S A TS T SVPHSLT PEPRLSPPVAKV KPMHMGRSSFP VPVEVERIDIGEP
Sbjct: 121 S-----ATTSITTSVPHSLTVPEPRLSPPVAKVTKPMHMGRSSFPVVPVEVERIDIGEPG 180
Query: 181 NTGAKSVAASKGPADYSSDPPNVSASSPSP--KNDDEHQDIDIDEIFGSVSSDDGNNAEE 240
NTGA SVAASK ADY+SDPPNVSA SPSP NDDEHQDIDIDEIFGSVSSDDGNN EE
Sbjct: 181 NTGASSVAASKEVADYTSDPPNVSAPSPSPGMDNDDEHQDIDIDEIFGSVSSDDGNNVEE 240
Query: 241 EKVDVGFDMNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRDDQTSSSSSS 300
EK+DVGFD+NVPH NDTDDEIADVDDSGDEA+KGPNAAEALRAQVNAEGRD QTSSSSSS
Sbjct: 241 EKIDVGFDINVPHHNDTDDEIADVDDSGDEAQKGPNAAEALRAQVNAEGRDKQTSSSSSS 300
Query: 301 ESGSGSSSGSSSGSSDSDGSDEDSVTSI 327
ESGSGSSSGSSSGSSDS+ SDEDSVTSI
Sbjct: 301 ESGSGSSSGSSSGSSDSEHSDEDSVTSI 323
BLAST of Sgr025933 vs. ExPASy TrEMBL
Match:
A0A6J1JWD6 (ELL-associated factor 1 OS=Cucurbita maxima OX=3661 GN=LOC111489464 PE=3 SV=1)
HSP 1 Score: 528.9 bits (1361), Expect = 1.5e-146
Identity = 295/345 (85.51%), Postives = 309/345 (89.57%), Query Frame = 0
Query: 1 MANNNKEEPKTAPQSDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
MANNNKEEPKTAPQ DRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKE
Sbjct: 1 MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
Query: 61 NRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
NRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61 NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
Query: 121 SAAAGV-AATSTTASVPHSLTAPEPRLSPPVAKVAKPMHMGRSSFPPVPVEVERIDIGEP 180
S+AAGV AA+ST+AS HSLT PEPRLSPP AKV KPMHMGR SFP V VEVE+IDIGEP
Sbjct: 121 SSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180
Query: 181 ANTGAKSVAASKGPADYSSDPPNVSASSPSPKNDDEHQDIDIDEIFGSVSSDDGNNAEEE 240
NTGAKSV ASKGPADYSSDPPNVSA SP PKNDDEHQDIDID+IFGSVSSDD NNAEE+
Sbjct: 181 GNTGAKSVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDENNAEED 240
Query: 241 KVDVGFDMNVPHQNDTDDEIADVDDSGDEAEKGPNAAE------------------ALRA 300
KVD GFD+NVPH NDTDDEIADVDDSGDEAEKGPNAAE ALRA
Sbjct: 241 KVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA 300
Query: 301 QVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI 327
QVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDS+G+DEDSVTSI
Sbjct: 301 QVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 345
BLAST of Sgr025933 vs. ExPASy TrEMBL
Match:
A0A6J1FGX9 (ELL-associated factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111445589 PE=3 SV=1)
HSP 1 Score: 524.6 bits (1350), Expect = 2.9e-145
Identity = 293/345 (84.93%), Postives = 307/345 (88.99%), Query Frame = 0
Query: 1 MANNNKEEPKTAPQSDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
MANNNKEEPKTAPQ DRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTKPGSLKKTKE
Sbjct: 1 MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
Query: 61 NRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
NRVT+EFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE
Sbjct: 61 NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
Query: 121 SAAAGV-AATSTTASVPHSLTAPEPRLSPPVAKVAKPMHMGRSSFPPVPVEVERIDIGEP 180
S+AA V AA+ST+AS HSLT PEPRLSPP AKV KPMHMGR SFP V VEVE+IDIGEP
Sbjct: 121 SSAAAVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180
Query: 181 ANTGAKSVAASKGPADYSSDPPNVSASSPSPKNDDEHQDIDIDEIFGSVSSDDGNNAEEE 240
NTGAK V ASKGPADYSSDPPNVSA SP PKNDDEHQDIDID+IFGSVSSDD NNAEE+
Sbjct: 181 GNTGAKPVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDENNAEED 240
Query: 241 KVDVGFDMNVPHQNDTDDEIADVDDSGDEAEKGPNAAE------------------ALRA 300
KVD GFD+NVPH NDTDDEIADVDDSGDEAEKGPNAAE ALRA
Sbjct: 241 KVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA 300
Query: 301 QVNAEGRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI 327
QVNAEGRD+Q+SSSSSSESGSGSSSGSSSGSSDS+G+DEDSVTSI
Sbjct: 301 QVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 345
BLAST of Sgr025933 vs. ExPASy TrEMBL
Match:
A0A6J1DE82 (ELL-associated factor 1 OS=Momordica charantia OX=3673 GN=LOC111019621 PE=3 SV=1)
HSP 1 Score: 519.6 bits (1337), Expect = 9.3e-144
Identity = 290/328 (88.41%), Postives = 300/328 (91.46%), Query Frame = 0
Query: 1 MANNNKEEPKTAPQSDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
MAN+NKEEPKTAPQS+RWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTK+
Sbjct: 1 MANDNKEEPKTAPQSERWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKD 60
Query: 61 NRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
NRVTVEFQNNQLG+PNVAFVGSSED KENDAVLFFDGETFRLERLHRAV LRH+RQ E
Sbjct: 61 NRVTVEFQNNQLGRPNVAFVGSSEDCKENDAVLFFDGETFRLERLHRAVTHLRHVRQADE 120
Query: 121 SAAAGVAATSTTASVPHSLTAPEPRLSPPVAKVAKPMHMGRSSFPPVPVEVERIDIGEPA 180
S A TS T SVPHSLT PEPRLSPPVAKV KPMHMGRSSFP VPVEVERIDIGEP
Sbjct: 121 S-----ATTSITTSVPHSLTVPEPRLSPPVAKVTKPMHMGRSSFPVVPVEVERIDIGEPG 180
Query: 181 NTGAKSVAASKGPADYSSDPPNVSASSPSP--KNDDEHQDIDIDEIFGSVSSDDGNNAEE 240
NTGA SVAASK ADY+SDPPNVSA SPSP NDDEHQDIDIDEIFGSVSSDDGNN EE
Sbjct: 181 NTGASSVAASKEVADYTSDPPNVSAPSPSPGMDNDDEHQDIDIDEIFGSVSSDDGNNVEE 240
Query: 241 EKVDVGFDMNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRDDQTSSSSSS 300
EK+DVGFD+NVPH NDTDDEIADVDDSGDEA+KGPNAAEALRAQVNAEGRD QTSSSSSS
Sbjct: 241 EKIDVGFDINVPHHNDTDDEIADVDDSGDEAQKGPNAAEALRAQVNAEGRDKQTSSSSSS 300
Query: 301 ESGSGSSSGSSSGSSDSDGSDEDSVTSI 327
ESGSGSSSGSSSGSSDS+ SDEDSVTSI
Sbjct: 301 ESGSGSSSGSSSGSSDSEHSDEDSVTSI 323
BLAST of Sgr025933 vs. ExPASy TrEMBL
Match:
A0A1S3C0N3 (ELL-associated factor 2 OS=Cucumis melo OX=3656 GN=LOC103495125 PE=3 SV=1)
HSP 1 Score: 509.2 bits (1310), Expect = 1.3e-140
Identity = 283/340 (83.24%), Postives = 298/340 (87.65%), Query Frame = 0
Query: 1 MANNNKEEPKTAPQSDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
MANN EEPKTAPQ DRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTKPG LKKTKE
Sbjct: 1 MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKE 60
Query: 61 NRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
NRVTVEFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETFRLERLHRAV QLRHLRQPGE
Sbjct: 61 NRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETFRLERLHRAVNQLRHLRQPGE 120
Query: 121 SAAAGVAATSTT--------------ASVPHSLTAPEPRLSPPVAKVAKPMHMGRSSFPP 180
SAAA AT+TT ASV HSLT PEPRLSPPV KVAKPMHMGRSSFP
Sbjct: 121 SAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPT 180
Query: 181 VPVEVERIDIGEPANTGAKSVAASKGPADYSSDPPNVSASSPSPKNDDEHQDIDIDEIFG 240
+PVEVERIDIGEP N GAK V ASKG DYSSDPPN S SSP KNDDEHQDIDID+IFG
Sbjct: 181 MPVEVERIDIGEPGNAGAKPVVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFG 240
Query: 241 SVSSDDGNNAEEEKVDVGFDMNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE 300
SVSSDDGNNAEEE+V+ GFD+N+PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Sbjct: 241 SVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE 300
Query: 301 GRDDQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI 327
GR +Q+SSSSSS SGSGSSSGSSS SSDS+GSDEDSVTSI
Sbjct: 301 GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI 340
BLAST of Sgr025933 vs. ExPASy TrEMBL
Match:
A0A0A0KM56 (EAF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G210030 PE=3 SV=1)
HSP 1 Score: 502.3 bits (1292), Expect = 1.5e-138
Identity = 285/337 (84.57%), Postives = 301/337 (89.32%), Query Frame = 0
Query: 1 MANNNKEEPKTAPQSDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
MANN EEPKTAPQ DRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTKPG LKKTKE
Sbjct: 1 MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKE 60
Query: 61 NRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
NRVTVEFQN+Q GKPN++FVGSSEDYKENDAVLFFDGETFRLERLHRAV QLRHLRQPGE
Sbjct: 61 NRVTVEFQNSQPGKPNLSFVGSSEDYKENDAVLFFDGETFRLERLHRAVNQLRHLRQPGE 120
Query: 121 SAA--------AGVAATS---TTASVPHSLTAPEPRLSPPVAKVAKPMHMGRSSFPPVPV 180
SAA AGVAA + TTASV HSLT PEPRLSPPV KV+KPMHMGRSSFP +PV
Sbjct: 121 SAAAVAAPATTAGVAAPAAAPTTASVLHSLTPPEPRLSPPVTKVSKPMHMGRSSFPTMPV 180
Query: 181 EVERIDIGEPANTGAKSVAASKGPADYSSDPPNVSASSPSPKNDDEHQDIDIDEIFGSVS 240
EVERIDIGEP N GAK+V ASKG +YSSDPPNVS SSP KNDDEHQDIDID+IFGSVS
Sbjct: 181 EVERIDIGEPGNAGAKTV-ASKGLTNYSSDPPNVSVSSPGLKNDDEHQDIDIDDIFGSVS 240
Query: 241 SDDGNNAEEEKVDVGFDMNVPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRD 300
SDDGNNAEEE+V+ GFD+N+PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGR
Sbjct: 241 SDDGNNAEEERVEPGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA 300
Query: 301 DQTSSSSSSESGSGSSSGSSSGSSDSDGSDEDSVTSI 327
+Q+SSSSSS SGSGSSSGSSS SSDS+ SDEDSVTSI
Sbjct: 301 EQSSSSSSSGSGSGSSSGSSSASSDSEASDEDSVTSI 336
BLAST of Sgr025933 vs. TAIR 10
Match:
AT1G71080.1 (RNA polymerase II transcription elongation factor )
HSP 1 Score: 271.6 bits (693), Expect = 8.5e-73
Identity = 198/351 (56.41%), Postives = 237/351 (67.52%), Query Frame = 0
Query: 1 MANNNKEEPKTAPQSDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
M+N++++EP TAP++D+WY+L LG S KD+SS+KFCTLRYEFKPASIDK + GS+ K K+
Sbjct: 1 MSNHSRDEPSTAPKTDQWYDLVLGSSAKDDSSHKFCTLRYEFKPASIDKNRSGSMHKKKD 60
Query: 61 NRVTVEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
NRV+VEFQNNQ GKP V F GSSEDYKE+DAVLFFDGE FRLERLHRAV QLRH+R PGE
Sbjct: 61 NRVSVEFQNNQPGKPKVTFEGSSEDYKESDAVLFFDGEKFRLERLHRAVTQLRHVRTPGE 120
Query: 121 SAAAGVAATSTTASVPHSLTAPEPRLSPPVAKVAKPMHMGRSSFPPVPVEVERIDIGEPA 180
SAAA +A E RLS PV + AK + RS P VPVEVERI+IG+P
Sbjct: 121 SAAASQSAVPV-----------EHRLS-PVGRAAKSPQVNRSLLPDVPVEVERIEIGKPE 180
Query: 181 NTGAKSVAASKGPADYSSDPPNVSASSP-SPKND--DEHQDIDIDEIFGSVSSDDGNNAE 240
N S PA+ NV A+SP KND DEHQ+ID+ EIFGS + ++ +NAE
Sbjct: 181 N--------SAEPANTG----NVPATSPVEDKNDDGDEHQEIDLVEIFGSFTPEN-DNAE 240
Query: 241 EEKVDVGFDMNVPHQ--NDTDDEIADV-DDSGDEAEKGPNAAEALRAQVNAEGRDDQTSS 300
+E D G + ++ + T++EIADV DDSG E EKG NAAEALRAQVNAE + QTSS
Sbjct: 241 KENADGGEYVESLNKQLSMTEEEIADVDDDSGGEGEKGLNAAEALRAQVNAEVQKSQTSS 300
Query: 301 SSSS----------------ESGSGSSSGSSSGSSD--SDGS-DEDSVTSI 327
SSSS SGSGS SSSGSS S GS DED V S+
Sbjct: 301 SSSSSGSSSGSDSDGRSKSVSSGSGSGGQSSSGSSSRGSGGSDDEDEVNSV 326
BLAST of Sgr025933 vs. TAIR 10
Match:
AT5G38050.1 (RNA polymerase II transcription elongation factor )
HSP 1 Score: 178.7 bits (452), Expect = 7.5e-45
Identity = 139/328 (42.38%), Postives = 182/328 (55.49%), Query Frame = 0
Query: 3 NNNKEEPKTAPQSDRWYNLSLGPSFKDES---SNKFCTLRYEFKPASIDKTKPGSLKKTK 62
+N+ EEPK AP+ +RWYN++LGP+ + + S KFCTLRYEFKPASID TKPG L K+K
Sbjct: 2 DNHNEEPKIAPEPNRWYNITLGPTLLNNNHSYSPKFCTLRYEFKPASIDSTKPGLLHKSK 61
Query: 63 ENRVTVEFQNNQLGKPNVAFVGSSEDY--KENDAVLFFDGETFRLERLHRAVKQLRHLRQ 122
+N+VT+EFQNNQL KP V F G SEDY ++ DA+LFFDGE FRLE+LHR+VK+L+ LR
Sbjct: 62 DNKVTLEFQNNQLNKPKVRFDGVSEDYNDRDKDAILFFDGENFRLEKLHRSVKRLKCLRV 121
Query: 123 PGESAAAGVAATSTTASVPHSLTAPEPRLSPPVAKVAKPMHMGRSSFPPVPVEVERIDIG 182
P ESA+A T ++ PPV K PV++ IDI
Sbjct: 122 PDESASASRVVT---------------KIVPPVEK---------------PVKMAHIDIN 181
Query: 183 EPANTGAKSVAASKGPADYSSDPPNVSASSPSPKNDDEHQDIDIDEIFGSVSSDDGNNAE 242
P D +D++I++ + + E
Sbjct: 182 NPV---------------------------------DFEEDVNIED---DNEEETLSRKE 241
Query: 243 EEKVDVGFDMNVPHQND-TDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRDDQTSSSS 302
+ + D+N+PH + DDEIA VD + DE+ KG NAAEALRAQVNAE R++ S
Sbjct: 242 FQTGGLDIDINLPHPAEMEDDEIAVVDINDDESYKGLNAAEALRAQVNAEAREE---SRK 260
Query: 303 SSESGSGSSSGSSSGSSDSDGSDEDSVT 325
SS SGSG S SS +S GS S +
Sbjct: 302 SSSSGSGRESESSESGVESSGSGSSSTS 260
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022993461.1 | 3.2e-146 | 85.51 | ELL-associated factor 1 [Cucurbita maxima] >XP_023551438.1 ELL-associated factor... | [more] |
XP_038893321.1 | 1.6e-145 | 83.80 | ELL-associated factor 2-like [Benincasa hispida] | [more] |
KAG6579241.1 | 6.0e-145 | 84.93 | Ell-associated factor Eaf, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_022939831.1 | 6.0e-145 | 84.93 | ELL-associated factor 1 [Cucurbita moschata] >KAG7016756.1 Ell-associated factor... | [more] |
XP_022151706.1 | 1.9e-143 | 88.41 | ELL-associated factor 1 [Momordica charantia] >XP_022151707.1 ELL-associated fac... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1JWD6 | 1.5e-146 | 85.51 | ELL-associated factor 1 OS=Cucurbita maxima OX=3661 GN=LOC111489464 PE=3 SV=1 | [more] |
A0A6J1FGX9 | 2.9e-145 | 84.93 | ELL-associated factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111445589 PE=3 SV=1 | [more] |
A0A6J1DE82 | 9.3e-144 | 88.41 | ELL-associated factor 1 OS=Momordica charantia OX=3673 GN=LOC111019621 PE=3 SV=1 | [more] |
A0A1S3C0N3 | 1.3e-140 | 83.24 | ELL-associated factor 2 OS=Cucumis melo OX=3656 GN=LOC103495125 PE=3 SV=1 | [more] |
A0A0A0KM56 | 1.5e-138 | 84.57 | EAF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G210030 PE=3 SV... | [more] |
Match Name | E-value | Identity | Description | |
AT1G71080.1 | 8.5e-73 | 56.41 | RNA polymerase II transcription elongation factor | [more] |
AT5G38050.1 | 7.5e-45 | 42.38 | RNA polymerase II transcription elongation factor | [more] |