Sgr024535 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr024535
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionUnknown protein
Locationtig00001291: 3924065 .. 3925616 (+)
RNA-Seq ExpressionSgr024535
SyntenySgr024535
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCCGACAAAACACACATGTTTTTCTACTTCAAATTTCACACCACGCCTTAATTATATTTGCTTTTTCATTATCTATTATTGTTATTATAAATTATTGGTTCCTGTTCCTGCACACACGTAACCCTTTAAACATAACAGATTATCAATACCCTCCTCTAGTCCCTCTGAAACCACCGGCCGCCACGCGTATAATCCAACGGCGGCGGAAGCATCAAATAACCGGCCACTTCCTCCGACGGGGACATAGGCCGTCCGATCATCAGCTGAATCCAGCTGCGCGGCGGCGTCAACTTGATTTGCCGGTGCATGATGATGATTTGCGTTTACATCGGCGCTTGAGCAACAAGTTTTCGCCACCGCCTGCAGCACCCGCTGCCCCTTGCCGTCGAGCAGCTTCGCTCTCAGGGCCCCCAGAAGGCCGTCGTCTTCTTCACTGCAACCTTCCTCAAAAGTGAAGGGTGGCGCTTCGAGTTGGCAAGCATCACCTACAACTAACCAACATGTCAATATTTTATAAATATTTGTAGGATAGATTTAAGTTTGGTTCTCGACTTTTAAAATTTTGTTTATTTAATTATGTATTATAAAAGTTTATTATAGACTCTTCCACTTTCAAGAACAATATTTTTTATATAATGGTGTTTACCATTAAGTTTTTGACAGGTAGAAATTTTTTTAAAAATAGAAAAGTTCTCTCTCTCTCTCCATGTTTCCTTCTTTTTGCAGTTTAGGAATAATATTTACTAATTGACTGGGCAGCACGGGGTTTCTGCTGCCCACCATTCAATTTTTGACACATGGATGTTTTTTAAAAAAAAAAATCTCTCTTCCTCTTCCTCTCTGCCTACTAGTAAAAAATTGAATGATGATAGCATGAACTCCTGTTACCCAGTCAATTAGCAAGTATTTTTGTCAAAAATTTAGTGTAGGTAACACTGTCTAACCAACAGGCAAATATTGTTCAACTTTCAAATTGTGTCTATCTAATTTTTCTACCTTAAAAAGCTTTAATATATCCTTGAACTTTTAATTTTGTAAAAACAACACTTGTTAACCGATCACTCAGTTTTTTACGCTAAAAGAAAAGAAGATAGAGGGGAGATAGAGTTTTTTCTTTTTTTTTTCAAAAAAATACCTGCTATAAAAACTGAGTCCTATAAGAATGTATTGTTCTTTTATAAGCATAGAGACTATATAAACATAGTTTAAAACTGTTCACTTTAGATTAAATAGACTTGACTAAACTTTGAATTTGACCGACATATTTCTATAAATTGGGTTCGATTATAAAGTGTAATCGACATCGATATTTAAATCCTTACCTGCAGCGGGGCGCGAAGAGCTCGGAGGCAAGTAGTCGAAGTTGGTGCGAGCGTTGGAGCCACGCAGAGCCCGCGCTGCATCATCGTAAGCCCGAGCCGCCTCCTCCGCGGTGTCGAAAGTCCCGAGCCACAGCCTGACCTTCTGCAGGGAGTCTTTGATCTCGGAGACCCATCTTCCGGAGGGCCTCTGGCGAACTCCTACATAGCGATGGTGGCCTCTGGATGA

mRNA sequence

ATGTCCCGACAAAACACACATGTTTTTCTACTTCAAATTTCACACCACGCCTTAATTATATTTGCTTTTTCATTATCTATTATTGTTATTATAAATTATTGGTTCCTGTTCCTGCACACACGTAACCCTTTAAACATAACAGATTATCAATACCCTCCTCTAGTCCCTCTGAAACCACCGGCCGCCACGCGTATAATCCAACGGCGGCGGAAGCATCAAATAACCGGCCACTTCCTCCGACGGGGACATAGGCCGTCCGATCATCAGCTGAATCCAGCTGCGCGGCGGCGTCAACTTGATTTGCCGGTGCATGATGATGATTTGCGTTTACATCGGCGCTTGAGCAACAAGTTTTCGCCACCGCCTGCAGCACCCGCTGCCCCTTGCCGTCGAGCAGCTTCGCTCTCAGGGCCCCCAGAAGGCCGTCGTCTTCTTCACTGCAACCTTCCTCAAAACGGGGCGCGAAGAGCTCGGAGGCAAGTAGTCGAAGTTGGTGCGAGCGTTGGAGCCACGCAGAGCCCGCGCTGCATCATCGTAAGCCCGAGCCGCCTCCTCCGCGGTGTCGAAAGTCCCGAGCCACAGCCTGACCTTCTGCAGGGAGTCTTTGATCTCGGAGACCCATCTTCCGGAGGGCCTCTGGCGAACTCCTACATAGCGATGGTGGCCTCTGGATGA

Coding sequence (CDS)

ATGTCCCGACAAAACACACATGTTTTTCTACTTCAAATTTCACACCACGCCTTAATTATATTTGCTTTTTCATTATCTATTATTGTTATTATAAATTATTGGTTCCTGTTCCTGCACACACGTAACCCTTTAAACATAACAGATTATCAATACCCTCCTCTAGTCCCTCTGAAACCACCGGCCGCCACGCGTATAATCCAACGGCGGCGGAAGCATCAAATAACCGGCCACTTCCTCCGACGGGGACATAGGCCGTCCGATCATCAGCTGAATCCAGCTGCGCGGCGGCGTCAACTTGATTTGCCGGTGCATGATGATGATTTGCGTTTACATCGGCGCTTGAGCAACAAGTTTTCGCCACCGCCTGCAGCACCCGCTGCCCCTTGCCGTCGAGCAGCTTCGCTCTCAGGGCCCCCAGAAGGCCGTCGTCTTCTTCACTGCAACCTTCCTCAAAACGGGGCGCGAAGAGCTCGGAGGCAAGTAGTCGAAGTTGGTGCGAGCGTTGGAGCCACGCAGAGCCCGCGCTGCATCATCGTAAGCCCGAGCCGCCTCCTCCGCGGTGTCGAAAGTCCCGAGCCACAGCCTGACCTTCTGCAGGGAGTCTTTGATCTCGGAGACCCATCTTCCGGAGGGCCTCTGGCGAACTCCTACATAGCGATGGTGGCCTCTGGATGA

Protein sequence

MSRQNTHVFLLQISHHALIIFAFSLSIIVIINYWFLFLHTRNPLNITDYQYPPLVPLKPPAATRIIQRRRKHQITGHFLRRGHRPSDHQLNPAARRRQLDLPVHDDDLRLHRRLSNKFSPPPAAPAAPCRRAASLSGPPEGRRLLHCNLPQNGARRARRQVVEVGASVGATQSPRCIIVSPSRLLRGVESPEPQPDLLQGVFDLGDPSSGGPLANSYIAMVASG
Homology
[Close]
BLAST of Sgr024535 vs. NCBI nr
Match: TKW31049.1 (hypothetical protein SEVIR_2G079366v2 [Setaria viridis])

HSP 1 Score: 56.2 bits (134), Expect = 4.1e-04
Identity = 32/71 (45.07%), Postives = 41/71 (57.75%), Query Frame = 0 

Query: 150 PQNGARRARRQVV---EVGASVGATQSPRCIIVSPSRLLRGVESPEPQPDLLQGVFDLGD 209
           P+   R  RR V    EVGA V A +    ++V P RLL G+E  +P PDLL GV DL  
Sbjct: 32  PRRKQRVRRRGVCAGGEVGARVRAPEEAGSLVVGPRRLLGGLERAQPHPDLLGGVLDLSH 91

Query: 210 PSSGGPLANSY 218
           P  GGPL +++
Sbjct: 92  PPPGGPLPDAH 102

[Close]
BLAST of Sgr024535 vs. ExPASy TrEMBL
Match: A0A4U6VT54 (Uncharacterized protein OS=Setaria viridis OX=4556 GN=SEVIR_2G079366v2 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.0e-04
Identity = 32/71 (45.07%), Postives = 41/71 (57.75%), Query Frame = 0 

Query: 150 PQNGARRARRQVV---EVGASVGATQSPRCIIVSPSRLLRGVESPEPQPDLLQGVFDLGD 209
           P+   R  RR V    EVGA V A +    ++V P RLL G+E  +P PDLL GV DL  
Sbjct: 32  PRRKQRVRRRGVCAGGEVGARVRAPEEAGSLVVGPRRLLGGLERAQPHPDLLGGVLDLSH 91

Query: 210 PSSGGPLANSY 218
           P  GGPL +++
Sbjct: 92  PPPGGPLPDAH 102

The following BLAST results are available for this feature:
BLAST of Sgr024535 vs. NCBI nr
Match NameE-valueIdentityDescription
TKW31049.14.1e-0445.07hypothetical protein SEVIR_2G079366v2 [Setaria viridis][more]
BLAST of Sgr024535 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr024535 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A4U6VT542.0e-0445.07Uncharacterized protein OS=Setaria viridis OX=4556 GN=SEVIR_2G079366v2 PE=4 SV=1[more]
BLAST of Sgr024535 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr024535.1Sgr024535.1mRNA