Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAACTGCTTGAAGAGCAACAAAGTGATGGCCCAAGATGAGCCTTCGCCTTCGCCTTTGCCTCCGACAGAAACTGATAAAGTAGATAAACCAGCGGGCGGATCGGCGCTGGCGCGGCAGAAGACGGAGGAGGCGAGAAGCGCTGCGCGAGGTAAGAAGGTGGTGAGGTTTAAGCTACAAGAAAATGAAAATTCCGGCGACGGAAAAGTGATCGTCGGCAGAAGTGGCGACGGCTCCGGAGCCAGAGGCGGAGTATTGAGGATTAAAGTGGTGGTGTCTCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGACAACAATTCCTGCACCTTGGAGGAAATGTTAGCTGAATTGAAGATGAAAGGCAGGGCGACAATTTCAGATGCTAAAACCGATGAAGATGAAGACGAGGATGAAAATGGAAGCTGGAGGCCGTCTTTGGAAAGTATTCCTGAGGATCTCCATTAG
mRNA sequence
ATGGGGAACTGCTTGAAGAGCAACAAAGTGATGGCCCAAGATGAGCCTTCGCCTTCGCCTTTGCCTCCGACAGAAACTGATAAAGTAGATAAACCAGCGGGCGGATCGGCGCTGGCGCGGCAGAAGACGGAGGAGGCGAGAAGCGCTGCGCGAGGTAAGAAGGTGGTGAGGTTTAAGCTACAAGAAAATGAAAATTCCGGCGACGGAAAAGTGATCGTCGGCAGAAGTGGCGACGGCTCCGGAGCCAGAGGCGGAGTATTGAGGATTAAAGTGGTGGTGTCTCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGACAACAATTCCTGCACCTTGGAGGAAATGTTAGCTGAATTGAAGATGAAAGGCAGGGCGACAATTTCAGATGCTAAAACCGATGAAGATGAAGACGAGGATGAAAATGGAAGCTGGAGGCCGTCTTTGGAAAGTATTCCTGAGGATCTCCATTAG
Coding sequence (CDS)
ATGGGGAACTGCTTGAAGAGCAACAAAGTGATGGCCCAAGATGAGCCTTCGCCTTCGCCTTTGCCTCCGACAGAAACTGATAAAGTAGATAAACCAGCGGGCGGATCGGCGCTGGCGCGGCAGAAGACGGAGGAGGCGAGAAGCGCTGCGCGAGGTAAGAAGGTGGTGAGGTTTAAGCTACAAGAAAATGAAAATTCCGGCGACGGAAAAGTGATCGTCGGCAGAAGTGGCGACGGCTCCGGAGCCAGAGGCGGAGTATTGAGGATTAAAGTGGTGGTGTCTCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGACAACAATTCCTGCACCTTGGAGGAAATGTTAGCTGAATTGAAGATGAAAGGCAGGGCGACAATTTCAGATGCTAAAACCGATGAAGATGAAGACGAGGATGAAAATGGAAGCTGGAGGCCGTCTTTGGAAAGTATTCCTGAGGATCTCCATTAG
Protein sequence
MGNCLKSNKVMAQDEPSPSPLPPTETDKVDKPAGGSALARQKTEEARSAARGKKVVRFKLQENENSGDGKVIVGRSGDGSGARGGVLRIKVVVSQKELKQILKDRDNNSCTLEEMLAELKMKGRATISDAKTDEDEDEDENGSWRPSLESIPEDLH
Homology
BLAST of Sgr023669 vs. NCBI nr
Match:
XP_022140639.1 (uncharacterized protein LOC111011249 [Momordica charantia])
HSP 1 Score: 172.6 bits (436), Expect = 2.8e-39
Identity = 109/160 (68.12%), Postives = 121/160 (75.62%), Query Frame = 0
Query: 1 MGNCLKSNKVMAQDE---PSP-SPLPPTETDKVDKPAGGSALARQKTEEARSAARGKKVV 60
MGNCL++N+VMAQDE PSP S L T DKPA GSALAR KTEEAR AAR KKVV
Sbjct: 43 MGNCLRNNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVV 102
Query: 61 RFKLQENENSGDGKVIVGRSGDGSGARGGVLRIKVVVSQKELKQILKDRDNNSCTLEEML 120
RF+ +E+E SG G GGVLRIKVVVSQKELKQILKDR++NS TLEE+L
Sbjct: 103 RFQQREDEISGGG--------------GGVLRIKVVVSQKELKQILKDRESNSSTLEELL 162
Query: 121 AELKMKGRATISDAKTDEDEDEDENGSWRPSLESIPEDLH 157
AELKMKGR TISDA+ D +EDENGSWRP+LESIPEDLH
Sbjct: 163 AELKMKGR-TISDARA--DNEEDENGSWRPALESIPEDLH 185
BLAST of Sgr023669 vs. NCBI nr
Match:
XP_038902397.1 (uncharacterized protein LOC120089037 [Benincasa hispida])
HSP 1 Score: 156.8 bits (395), Expect = 1.6e-34
Identity = 96/154 (62.34%), Postives = 108/154 (70.13%), Query Frame = 0
Query: 3 NCLKSNKVMAQDEPSPSPLPPTETDKV-DKPAGGSALARQKTEEARSAARGKKVVRFKLQ 62
NC KSNKVMAQDEP LPP E KV +KP GSA+A+ KT EAR+ KKVVRFKLQ
Sbjct: 4 NCFKSNKVMAQDEPE-DLLPPIEAKKVEEKPRPGSAMAKPKTAEARTGGASKKVVRFKLQ 63
Query: 63 ENE--NSGDGKVIVGRSGDGSGARGGVLRIKVVVSQKELKQILKDRDNNSCTLEEMLAEL 122
E E NSGD GGVLRIKVV+SQKELKQ+LKDR+NNSCTLEE++ EL
Sbjct: 64 EEEEKNSGD---------------GGVLRIKVVMSQKELKQMLKDRENNSCTLEELITEL 123
Query: 123 KMKGRATISDAKTDEDEDEDENGSWRPSLESIPE 154
K+KGR TISD + D EDENG W+P LE IPE
Sbjct: 124 KVKGRTTISDGRI--DAVEDENGRWKPDLEGIPE 139
BLAST of Sgr023669 vs. NCBI nr
Match:
KAG6570883.1 (hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 151.4 bits (381), Expect = 6.6e-33
Identity = 103/162 (63.58%), Postives = 119/162 (73.46%), Query Frame = 0
Query: 1 MGN-CLKSNKVMAQDEP--SPSPLPPTETDKV-DKPAGGSALARQKTEEARS-AARGKKV 60
MGN C KSNKVMAQDE + S PP E KV +KP GSA+A+ KT E RS AA GKKV
Sbjct: 1 MGNSCFKSNKVMAQDESCLALSNSPPVEAKKVEEKPVAGSAMAKPKTAEERSGAAAGKKV 60
Query: 61 VRFKLQ-ENENSGDGKVIVGRSGDGSGARGGVLRIKVVVSQKELKQILKDRDNNSCTLEE 120
VRFKLQ E+ENSG G GDG R GVLRIKVV+SQ+ELKQILK+ +N+S +LEE
Sbjct: 61 VRFKLQEEDENSG------GSGGDGD--RAGVLRIKVVMSQRELKQILKENENSSRSLEE 120
Query: 121 MLAELKMKGRATISDAKTDEDEDEDENGSWRPSLESIPEDLH 157
++AE K+KGR T+SDA T DE EDENGS RP+LE IPE LH
Sbjct: 121 LIAEFKVKGRTTVSDAIT--DEVEDENGSRRPALECIPEGLH 152
BLAST of Sgr023669 vs. NCBI nr
Match:
KGN63254.1 (hypothetical protein Csa_022493 [Cucumis sativus])
HSP 1 Score: 124.0 bits (310), Expect = 1.1e-24
Identity = 87/158 (55.06%), Postives = 101/158 (63.92%), Query Frame = 0
Query: 1 MGN-CLKSNKVMAQDEPSPSPLPP---TETDKV-DKPAGGSALARQKTEEARSAARGKKV 60
MGN C KSNKVMAQD+ S PP E KV +P GSA+A+ K A GKKV
Sbjct: 1 MGNICFKSNKVMAQDD-SYDDFPPHHLIEPKKVQQQPLPGSAMAKPK--NGTGGAAGKKV 60
Query: 61 VRFKLQENENSGDGKVIVGRSGDGSGARGGVLRIKVVVSQKELKQILKDRDNNSCTLEEM 120
VRF LQE E +G+ SGD GVLRIKVV+SQKELKQILK R+NNSC+LEE+
Sbjct: 61 VRFNLQEEEKDEEGR----NSGDSG---PGVLRIKVVISQKELKQILKSRENNSCSLEEL 120
Query: 121 LAELKMKGRATISDAKTDEDEDEDENGSWRPSLESIPE 154
+ ELK+KGRAT A DE GSW+P+LE IPE
Sbjct: 121 IEELKVKGRATTVSA--------DETGSWKPALECIPE 140
BLAST of Sgr023669 vs. NCBI nr
Match:
TYK24218.1 (hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa])
HSP 1 Score: 122.5 bits (306), Expect = 3.3e-24
Identity = 85/163 (52.15%), Postives = 104/163 (63.80%), Query Frame = 0
Query: 1 MGN-CLKSNKVMAQDEPSPSPLPP---TETDKVDKPAGGSALARQKTEEARSAARGKKVV 60
MGN C ++NKVMAQD+ S LPP E +KV++ A K + A GKKVV
Sbjct: 1 MGNICFRTNKVMAQDD-SYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVV 60
Query: 61 RFKLQENENSGDGKVIVGRSGDGSGARGGVLRIKVVVSQKELKQILKDRDNNSCTLEEML 120
RF LQE E + + SGD SGA GVLRIKVV+SQKELK+ILK+R+NNSC+LEE++
Sbjct: 61 RFNLQEEEEDQEDR----NSGDDSGA--GVLRIKVVISQKELKEILKNRENNSCSLEELI 120
Query: 121 AELKMKGRATISDAKTDEDEDEDENGSWRPSLESIPE---DLH 157
ELK+KGRAT DE GSW+P+LE IPE DLH
Sbjct: 121 EELKVKGRATTV---------SDEIGSWKPALECIPEGEGDLH 147
BLAST of Sgr023669 vs. ExPASy TrEMBL
Match:
A0A6J1CG85 (uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011249 PE=4 SV=1)
HSP 1 Score: 172.6 bits (436), Expect = 1.3e-39
Identity = 109/160 (68.12%), Postives = 121/160 (75.62%), Query Frame = 0
Query: 1 MGNCLKSNKVMAQDE---PSP-SPLPPTETDKVDKPAGGSALARQKTEEARSAARGKKVV 60
MGNCL++N+VMAQDE PSP S L T DKPA GSALAR KTEEAR AAR KKVV
Sbjct: 43 MGNCLRNNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVV 102
Query: 61 RFKLQENENSGDGKVIVGRSGDGSGARGGVLRIKVVVSQKELKQILKDRDNNSCTLEEML 120
RF+ +E+E SG G GGVLRIKVVVSQKELKQILKDR++NS TLEE+L
Sbjct: 103 RFQQREDEISGGG--------------GGVLRIKVVVSQKELKQILKDRESNSSTLEELL 162
Query: 121 AELKMKGRATISDAKTDEDEDEDENGSWRPSLESIPEDLH 157
AELKMKGR TISDA+ D +EDENGSWRP+LESIPEDLH
Sbjct: 163 AELKMKGR-TISDARA--DNEEDENGSWRPALESIPEDLH 185
BLAST of Sgr023669 vs. ExPASy TrEMBL
Match:
A0A0A0LQE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1)
HSP 1 Score: 124.0 bits (310), Expect = 5.4e-25
Identity = 87/158 (55.06%), Postives = 101/158 (63.92%), Query Frame = 0
Query: 1 MGN-CLKSNKVMAQDEPSPSPLPP---TETDKV-DKPAGGSALARQKTEEARSAARGKKV 60
MGN C KSNKVMAQD+ S PP E KV +P GSA+A+ K A GKKV
Sbjct: 1 MGNICFKSNKVMAQDD-SYDDFPPHHLIEPKKVQQQPLPGSAMAKPK--NGTGGAAGKKV 60
Query: 61 VRFKLQENENSGDGKVIVGRSGDGSGARGGVLRIKVVVSQKELKQILKDRDNNSCTLEEM 120
VRF LQE E +G+ SGD GVLRIKVV+SQKELKQILK R+NNSC+LEE+
Sbjct: 61 VRFNLQEEEKDEEGR----NSGDSG---PGVLRIKVVISQKELKQILKSRENNSCSLEEL 120
Query: 121 LAELKMKGRATISDAKTDEDEDEDENGSWRPSLESIPE 154
+ ELK+KGRAT A DE GSW+P+LE IPE
Sbjct: 121 IEELKVKGRATTVSA--------DETGSWKPALECIPE 140
BLAST of Sgr023669 vs. ExPASy TrEMBL
Match:
A0A5D3DKZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00200 PE=4 SV=1)
HSP 1 Score: 122.5 bits (306), Expect = 1.6e-24
Identity = 85/163 (52.15%), Postives = 104/163 (63.80%), Query Frame = 0
Query: 1 MGN-CLKSNKVMAQDEPSPSPLPP---TETDKVDKPAGGSALARQKTEEARSAARGKKVV 60
MGN C ++NKVMAQD+ S LPP E +KV++ A K + A GKKVV
Sbjct: 1 MGNICFRTNKVMAQDD-SYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVV 60
Query: 61 RFKLQENENSGDGKVIVGRSGDGSGARGGVLRIKVVVSQKELKQILKDRDNNSCTLEEML 120
RF LQE E + + SGD SGA GVLRIKVV+SQKELK+ILK+R+NNSC+LEE++
Sbjct: 61 RFNLQEEEEDQEDR----NSGDDSGA--GVLRIKVVISQKELKEILKNRENNSCSLEELI 120
Query: 121 AELKMKGRATISDAKTDEDEDEDENGSWRPSLESIPE---DLH 157
ELK+KGRAT DE GSW+P+LE IPE DLH
Sbjct: 121 EELKVKGRATTV---------SDEIGSWKPALECIPEGEGDLH 147
BLAST of Sgr023669 vs. ExPASy TrEMBL
Match:
A0A7N2MA05 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 87.8 bits (216), Expect = 4.3e-14
Identity = 69/155 (44.52%), Postives = 97/155 (62.58%), Query Frame = 0
Query: 1 MGNCLKSNKVMAQDEPSPSPLPPTETDKVDKPAGGSALARQKTEEARSAARGKKVVRFKL 60
MGNCL SNK +AQ+E P E + KP+ S L K + + KKVVRFKL
Sbjct: 1 MGNCL-SNKSLAQEEEVPK---EAEVVEQTKPSTASKLEPVKLVDG-GHKKKKKVVRFKL 60
Query: 61 QENENSGDGKVIVGRSGDGSGARGGVLRIKVVVSQKELKQILKDRDN-NSCTLEEMLAEL 120
+E++ + VG S +G +R GV+RI+VVV+QKELKQIL ++ ++E+++ L
Sbjct: 61 EEDDTN------VGTSSEGD-SRSGVVRIRVVVTQKELKQILDCKEGLKYSSVEQLVNAL 120
Query: 121 KMKGRATISDAKTDEDEDEDENGSWRPSLESIPED 155
++GR IS+ +T DEDE N +WRP+LESIPED
Sbjct: 121 NLRGR-KISEVRT-SDEDEGINSNWRPALESIPED 141
BLAST of Sgr023669 vs. ExPASy TrEMBL
Match:
A0A6J1B1M6 (uncharacterized protein LOC110423293 OS=Herrania umbratica OX=108875 GN=LOC110423293 PE=4 SV=1)
HSP 1 Score: 82.8 bits (203), Expect = 1.4e-12
Identity = 61/156 (39.10%), Postives = 90/156 (57.69%), Query Frame = 0
Query: 1 MGNCLKSNKVMAQ-DEPSPSPLPPTETDKVDKPAGGSALARQKTEEARSAARGKKVVRFK 60
MGNCL SNK++AQ D+P P ++ K + + + KK+VRFK
Sbjct: 1 MGNCLTSNKIVAQNDQPEPQGCRAEVIEETGKVTASKLERAEVAADEGEKVKKKKMVRFK 60
Query: 61 LQENENSGDGKVIVGRSGDGSGARGGVLRIKVVVSQKELKQILKDR-DNNSCTLEEMLAE 120
L E EN DG GR G+ ++ GV+RI++VV+QKELKQIL R D +LE ++
Sbjct: 61 LNE-ENDVDG----GRQGE---SKDGVVRIRLVVTQKELKQILSSREDLKHTSLEGLIRV 120
Query: 121 LKMKGRATISDAKTDEDEDEDENGSWRPSLESIPED 155
+K++G +T ++D+ +G WRP+LESIPE+
Sbjct: 121 MKLRGVRISEGGRT--NDDDGFHGGWRPALESIPEE 146
BLAST of Sgr023669 vs. TAIR 10
Match:
AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 52.0 bits (123), Expect = 5.1e-07
Identity = 51/156 (32.69%), Postives = 80/156 (51.28%), Query Frame = 0
Query: 1 MGNCLKSNKVMA---QDEPSPSPLPPTETDKVDKPAGGSALARQKTEEARSAARGKKVVR 60
MGNCL+ + +A +D+ P PL + EE +++ RG+
Sbjct: 1 MGNCLRHDNGVARKEKDDLDPEPLV------------------KLLEEGKTSFRGE---- 60
Query: 61 FKLQENENSGDGKVIVGRSGDGSGARGGVLRIKVVVSQKELKQILKDRDNNSCTLEEMLA 120
+E+E S + V+RIKVVV++KEL+QIL + N ++++++
Sbjct: 61 ---EESERSTE-------------EESKVVRIKVVVTKKELRQILGHK-NGINSIQQLVH 116
Query: 121 ELKMKGRATISDAKTDEDEDEDENGSWRPSLESIPE 154
LK GR IS A +EDE E+ + +WRP+LESIPE
Sbjct: 121 VLKDSGR-NISMASYEEDEKEEGDENWRPTLESIPE 116
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022140639.1 | 2.8e-39 | 68.13 | uncharacterized protein LOC111011249 [Momordica charantia] | [more] |
XP_038902397.1 | 1.6e-34 | 62.34 | uncharacterized protein LOC120089037 [Benincasa hispida] | [more] |
KAG6570883.1 | 6.6e-33 | 63.58 | hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KGN63254.1 | 1.1e-24 | 55.06 | hypothetical protein Csa_022493 [Cucumis sativus] | [more] |
TYK24218.1 | 3.3e-24 | 52.15 | hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CG85 | 1.3e-39 | 68.13 | uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
A0A0A0LQE9 | 5.4e-25 | 55.06 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1 | [more] |
A0A5D3DKZ8 | 1.6e-24 | 52.15 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A7N2MA05 | 4.3e-14 | 44.52 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
A0A6J1B1M6 | 1.4e-12 | 39.10 | uncharacterized protein LOC110423293 OS=Herrania umbratica OX=108875 GN=LOC11042... | [more] |
Match Name | E-value | Identity | Description | |
AT3G21680.1 | 5.1e-07 | 32.69 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... | [more] |