Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACTCACGCCCGTTCAGCGTATGCAAAGTCGTCGGCAATCATGCCTTCCGAAGTTAATACATATCGACGAAGAGAAGGTGAAGAACAGAAGAGGAAACAGCATGAGTCTTAGCCCCAAGTCGCGGAGGACTTTGATGAAGGCTCAAGGTGTACGGCAACCACCAGCCACCACCGTCGTATCCAAAAGGCCGGCGAAGAAAGATGGGGTTCTTGAACTCATTCAGCCAAAGAAGCTCTTTAAAGACGTTGAAAAATCAGTACCCGCCAGTGCAAAAAGACCATTGAGGACGACGGGTAGGATTGTAGCGAGCCGTTACAATCAGACAAACGAAAGTTCAGCAGTAGCCACAGAGAACCGTAAGAGGTCTTTGCCGGGGAATTGCAAAGACGACGCGAGCAGCAGATATGATAAGCGGCGGTCTTCTTCAGAGTTGGCCGGAGCAAGGCCCAGCAAAGCCGGGTGA
mRNA sequence
ATGGAACTCACGCCCGTTCAGCGTATGCAAAGTCGTCGGCAATCATGCCTTCCGAAGTTAATACATATCGACGAAGAGAAGGTGAAGAACAGAAGAGGAAACAGCATGAGTCTTAGCCCCAAGTCGCGGAGGACTTTGATGAAGGCTCAAGGTGTACGGCAACCACCAGCCACCACCGTCGTATCCAAAAGGCCGGCGAAGAAAGATGGGGTTCTTGAACTCATTCAGCCAAAGAAGCTCTTTAAAGACGTTGAAAAATCAGTACCCGCCAGTGCAAAAAGACCATTGAGGACGACGGGTAGGATTGTAGCGAGCCGTTACAATCAGACAAACGAAAGTTCAGCAGTAGCCACAGAGAACCGTAAGAGGTCTTTGCCGGGGAATTGCAAAGACGACGCGAGCAGCAGATATGATAAGCGGCGGTCTTCTTCAGAGTTGGCCGGAGCAAGGCCCAGCAAAGCCGGGTGA
Coding sequence (CDS)
ATGGAACTCACGCCCGTTCAGCGTATGCAAAGTCGTCGGCAATCATGCCTTCCGAAGTTAATACATATCGACGAAGAGAAGGTGAAGAACAGAAGAGGAAACAGCATGAGTCTTAGCCCCAAGTCGCGGAGGACTTTGATGAAGGCTCAAGGTGTACGGCAACCACCAGCCACCACCGTCGTATCCAAAAGGCCGGCGAAGAAAGATGGGGTTCTTGAACTCATTCAGCCAAAGAAGCTCTTTAAAGACGTTGAAAAATCAGTACCCGCCAGTGCAAAAAGACCATTGAGGACGACGGGTAGGATTGTAGCGAGCCGTTACAATCAGACAAACGAAAGTTCAGCAGTAGCCACAGAGAACCGTAAGAGGTCTTTGCCGGGGAATTGCAAAGACGACGCGAGCAGCAGATATGATAAGCGGCGGTCTTCTTCAGAGTTGGCCGGAGCAAGGCCCAGCAAAGCCGGGTGA
Protein sequence
MELTPVQRMQSRRQSCLPKLIHIDEEKVKNRRGNSMSLSPKSRRTLMKAQGVRQPPATTVVSKRPAKKDGVLELIQPKKLFKDVEKSVPASAKRPLRTTGRIVASRYNQTNESSAVATENRKRSLPGNCKDDASSRYDKRRSSSELAGARPSKAG
Homology
BLAST of Sgr023630 vs. NCBI nr
Match:
XP_022140574.1 (uncharacterized protein LOC111011196 [Momordica charantia])
HSP 1 Score: 223.0 bits (567), Expect = 1.8e-54
Identity = 125/150 (83.33%), Postives = 137/150 (91.33%), Query Frame = 0
Query: 2 ELTPVQRMQSRRQSCLPKLIHIDEEKVKNRRGNSMSLSPKSRRTLMKAQGVRQPPATTVV 61
ELTP QR+QSRRQSCLPKL+ IDE+K NRRG+SMSLSPKSRRTL+KAQGVRQ PATTVV
Sbjct: 221 ELTPAQRLQSRRQSCLPKLLDIDEQKGNNRRGSSMSLSPKSRRTLIKAQGVRQ-PATTVV 280
Query: 62 SKRPAKKDGVLELIQPKKLF-KDVEKSVPASAKRPLRTTGRIVASRYNQTNESSAVATEN 121
SKR KKDGVL+LIQPKKLF KDVEKSVP SAK+P+R TGRIVASRY+QTNE+SAVATEN
Sbjct: 281 SKRAVKKDGVLDLIQPKKLFIKDVEKSVPPSAKKPIR-TGRIVASRYSQTNENSAVATEN 340
Query: 122 RKRSLPGNCKDDASSRYDKRRSSSELAGAR 151
RKRSLPGNCKDD SSRYDKRRSSSEL ++
Sbjct: 341 RKRSLPGNCKDDGSSRYDKRRSSSELCRSK 368
BLAST of Sgr023630 vs. NCBI nr
Match:
XP_038900931.1 (uncharacterized protein LOC120087979 [Benincasa hispida])
HSP 1 Score: 215.7 bits (548), Expect = 2.8e-52
Identity = 119/150 (79.33%), Postives = 133/150 (88.67%), Query Frame = 0
Query: 2 ELTPVQRMQSRRQSCLPKLIHIDEEKVKNRRGNSMSLSPKSRRTLMKAQGVRQPPATTVV 61
E+ QR+Q+RRQSCLPKL+ IDEEK KNRRGNSMSLSPKSRRTL+KAQ VR+ PATT+V
Sbjct: 211 EIMSAQRIQNRRQSCLPKLLDIDEEKAKNRRGNSMSLSPKSRRTLIKAQTVRK-PATTIV 270
Query: 62 SKRPAKKDGVLELIQPKKLFKDVEKSVPA-SAKRPLRTTGRIVASRYNQTNESSAVATEN 121
SKRPAKKDGV+ELIQPKKLFKD+EK P+ S K+PLR TGRIVASRYNQTNESS +ATEN
Sbjct: 271 SKRPAKKDGVVELIQPKKLFKDIEKPAPSTSVKKPLR-TGRIVASRYNQTNESSQIATEN 330
Query: 122 RKRSLPGNCKDDASSRYDKRRSSSELAGAR 151
RK SLPGNCKDD SSRYDKRRSSSEL ++
Sbjct: 331 RKSSLPGNCKDDGSSRYDKRRSSSELCRSK 358
BLAST of Sgr023630 vs. NCBI nr
Match:
KAA0047899.1 (uncharacterized protein E6C27_scaffold133G001770 [Cucumis melo var. makuwa])
HSP 1 Score: 215.3 bits (547), Expect = 3.7e-52
Identity = 119/150 (79.33%), Postives = 132/150 (88.00%), Query Frame = 0
Query: 2 ELTPVQRMQSRRQSCLPKLIHIDEEKVKNRRGNSMSLSPKSRRTLMKAQGVRQPPATTVV 61
E+TP QR+Q+RRQSCLPKL+ IDE K KNRRGNS SLSPKSRRTL+KAQ VR+ PATT+V
Sbjct: 219 EITPAQRIQNRRQSCLPKLLDIDEVKAKNRRGNSFSLSPKSRRTLIKAQTVRK-PATTIV 278
Query: 62 SKRPAKKDGVLELIQPKKLFKDVEKSV-PASAKRPLRTTGRIVASRYNQTNESSAVATEN 121
SKRP KKDGV E IQPKKLFKDVEKSV P S K+PLR TGRI+ASRYNQTNESS V TEN
Sbjct: 279 SKRPVKKDGVFESIQPKKLFKDVEKSVPPTSVKKPLR-TGRIIASRYNQTNESSQVPTEN 338
Query: 122 RKRSLPGNCKDDASSRYDKRRSSSELAGAR 151
RKRSLPGNCKDD SSRYDKRRSSS+L+ ++
Sbjct: 339 RKRSLPGNCKDDGSSRYDKRRSSSDLSQSK 366
BLAST of Sgr023630 vs. NCBI nr
Match:
XP_008448218.1 (PREDICTED: uncharacterized protein LOC103490474 [Cucumis melo] >ADN33895.1 hypothetical protein [Cucumis melo subsp. melo] >TYK02176.1 uncharacterized protein E5676_scaffold388G00740 [Cucumis melo var. makuwa])
HSP 1 Score: 215.3 bits (547), Expect = 3.7e-52
Identity = 119/150 (79.33%), Postives = 132/150 (88.00%), Query Frame = 0
Query: 2 ELTPVQRMQSRRQSCLPKLIHIDEEKVKNRRGNSMSLSPKSRRTLMKAQGVRQPPATTVV 61
E+TP QR+Q+RRQSCLPKL+ IDE K KNRRGNS SLSPKSRRTL+KAQ VR+ PATT+V
Sbjct: 219 EITPAQRIQNRRQSCLPKLLDIDEVKAKNRRGNSFSLSPKSRRTLIKAQTVRK-PATTIV 278
Query: 62 SKRPAKKDGVLELIQPKKLFKDVEKSV-PASAKRPLRTTGRIVASRYNQTNESSAVATEN 121
SKRP KKDGV E IQPKKLFKDVEKSV P S K+PLR TGRI+ASRYNQTNESS V TEN
Sbjct: 279 SKRPVKKDGVFESIQPKKLFKDVEKSVPPTSVKKPLR-TGRIIASRYNQTNESSQVPTEN 338
Query: 122 RKRSLPGNCKDDASSRYDKRRSSSELAGAR 151
RKRSLPGNCKDD SSRYDKRRSSS+L+ ++
Sbjct: 339 RKRSLPGNCKDDGSSRYDKRRSSSDLSQSK 366
BLAST of Sgr023630 vs. NCBI nr
Match:
XP_011656924.1 (uncharacterized protein LOC105435784 [Cucumis sativus] >KGN46684.1 hypothetical protein Csa_021080 [Cucumis sativus])
HSP 1 Score: 208.4 bits (529), Expect = 4.5e-50
Identity = 113/149 (75.84%), Postives = 127/149 (85.23%), Query Frame = 0
Query: 2 ELTPVQRMQSRRQSCLPKLIHIDEEKVKNRRGNSMSLSPKSRRTLMKAQGVRQPPATTVV 61
E+TP QR+Q+RRQSCLPKL+ IDE KVKNRRGNS SLSPKSR TL+KA VR+ PATT+V
Sbjct: 219 EITPAQRIQNRRQSCLPKLLDIDEVKVKNRRGNSFSLSPKSRGTLIKANTVRK-PATTIV 278
Query: 62 SKRPAKKDGVLELIQPKKLFKDVEKSVPASAKRPLRTTGRIVASRYNQTNESSAVATENR 121
SKRP KKDGV E IQPKKLFKDVEKSVP ++ + TGRI+ASRYNQTNESS V+ ENR
Sbjct: 279 SKRPVKKDGVSEFIQPKKLFKDVEKSVPPTSVKKQLRTGRIIASRYNQTNESSQVSIENR 338
Query: 122 KRSLPGNCKDDASSRYDKRRSSSELAGAR 151
KRSLPGNCKDD SSRYDKRRSSSEL ++
Sbjct: 339 KRSLPGNCKDDGSSRYDKRRSSSELCQSK 366
BLAST of Sgr023630 vs. ExPASy TrEMBL
Match:
A0A6J1CG24 (uncharacterized protein LOC111011196 OS=Momordica charantia OX=3673 GN=LOC111011196 PE=4 SV=1)
HSP 1 Score: 223.0 bits (567), Expect = 8.6e-55
Identity = 125/150 (83.33%), Postives = 137/150 (91.33%), Query Frame = 0
Query: 2 ELTPVQRMQSRRQSCLPKLIHIDEEKVKNRRGNSMSLSPKSRRTLMKAQGVRQPPATTVV 61
ELTP QR+QSRRQSCLPKL+ IDE+K NRRG+SMSLSPKSRRTL+KAQGVRQ PATTVV
Sbjct: 221 ELTPAQRLQSRRQSCLPKLLDIDEQKGNNRRGSSMSLSPKSRRTLIKAQGVRQ-PATTVV 280
Query: 62 SKRPAKKDGVLELIQPKKLF-KDVEKSVPASAKRPLRTTGRIVASRYNQTNESSAVATEN 121
SKR KKDGVL+LIQPKKLF KDVEKSVP SAK+P+R TGRIVASRY+QTNE+SAVATEN
Sbjct: 281 SKRAVKKDGVLDLIQPKKLFIKDVEKSVPPSAKKPIR-TGRIVASRYSQTNENSAVATEN 340
Query: 122 RKRSLPGNCKDDASSRYDKRRSSSELAGAR 151
RKRSLPGNCKDD SSRYDKRRSSSEL ++
Sbjct: 341 RKRSLPGNCKDDGSSRYDKRRSSSELCRSK 368
BLAST of Sgr023630 vs. ExPASy TrEMBL
Match:
A0A5A7U374 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001770 PE=4 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52
Identity = 119/150 (79.33%), Postives = 132/150 (88.00%), Query Frame = 0
Query: 2 ELTPVQRMQSRRQSCLPKLIHIDEEKVKNRRGNSMSLSPKSRRTLMKAQGVRQPPATTVV 61
E+TP QR+Q+RRQSCLPKL+ IDE K KNRRGNS SLSPKSRRTL+KAQ VR+ PATT+V
Sbjct: 219 EITPAQRIQNRRQSCLPKLLDIDEVKAKNRRGNSFSLSPKSRRTLIKAQTVRK-PATTIV 278
Query: 62 SKRPAKKDGVLELIQPKKLFKDVEKSV-PASAKRPLRTTGRIVASRYNQTNESSAVATEN 121
SKRP KKDGV E IQPKKLFKDVEKSV P S K+PLR TGRI+ASRYNQTNESS V TEN
Sbjct: 279 SKRPVKKDGVFESIQPKKLFKDVEKSVPPTSVKKPLR-TGRIIASRYNQTNESSQVPTEN 338
Query: 122 RKRSLPGNCKDDASSRYDKRRSSSELAGAR 151
RKRSLPGNCKDD SSRYDKRRSSS+L+ ++
Sbjct: 339 RKRSLPGNCKDDGSSRYDKRRSSSDLSQSK 366
BLAST of Sgr023630 vs. ExPASy TrEMBL
Match:
A0A5D3BVB9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00740 PE=4 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52
Identity = 119/150 (79.33%), Postives = 132/150 (88.00%), Query Frame = 0
Query: 2 ELTPVQRMQSRRQSCLPKLIHIDEEKVKNRRGNSMSLSPKSRRTLMKAQGVRQPPATTVV 61
E+TP QR+Q+RRQSCLPKL+ IDE K KNRRGNS SLSPKSRRTL+KAQ VR+ PATT+V
Sbjct: 219 EITPAQRIQNRRQSCLPKLLDIDEVKAKNRRGNSFSLSPKSRRTLIKAQTVRK-PATTIV 278
Query: 62 SKRPAKKDGVLELIQPKKLFKDVEKSV-PASAKRPLRTTGRIVASRYNQTNESSAVATEN 121
SKRP KKDGV E IQPKKLFKDVEKSV P S K+PLR TGRI+ASRYNQTNESS V TEN
Sbjct: 279 SKRPVKKDGVFESIQPKKLFKDVEKSVPPTSVKKPLR-TGRIIASRYNQTNESSQVPTEN 338
Query: 122 RKRSLPGNCKDDASSRYDKRRSSSELAGAR 151
RKRSLPGNCKDD SSRYDKRRSSS+L+ ++
Sbjct: 339 RKRSLPGNCKDDGSSRYDKRRSSSDLSQSK 366
BLAST of Sgr023630 vs. ExPASy TrEMBL
Match:
E5GBQ3 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52
Identity = 119/150 (79.33%), Postives = 132/150 (88.00%), Query Frame = 0
Query: 2 ELTPVQRMQSRRQSCLPKLIHIDEEKVKNRRGNSMSLSPKSRRTLMKAQGVRQPPATTVV 61
E+TP QR+Q+RRQSCLPKL+ IDE K KNRRGNS SLSPKSRRTL+KAQ VR+ PATT+V
Sbjct: 219 EITPAQRIQNRRQSCLPKLLDIDEVKAKNRRGNSFSLSPKSRRTLIKAQTVRK-PATTIV 278
Query: 62 SKRPAKKDGVLELIQPKKLFKDVEKSV-PASAKRPLRTTGRIVASRYNQTNESSAVATEN 121
SKRP KKDGV E IQPKKLFKDVEKSV P S K+PLR TGRI+ASRYNQTNESS V TEN
Sbjct: 279 SKRPVKKDGVFESIQPKKLFKDVEKSVPPTSVKKPLR-TGRIIASRYNQTNESSQVPTEN 338
Query: 122 RKRSLPGNCKDDASSRYDKRRSSSELAGAR 151
RKRSLPGNCKDD SSRYDKRRSSS+L+ ++
Sbjct: 339 RKRSLPGNCKDDGSSRYDKRRSSSDLSQSK 366
BLAST of Sgr023630 vs. ExPASy TrEMBL
Match:
A0A1S3BJ66 (uncharacterized protein LOC103490474 OS=Cucumis melo OX=3656 GN=LOC103490474 PE=4 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52
Identity = 119/150 (79.33%), Postives = 132/150 (88.00%), Query Frame = 0
Query: 2 ELTPVQRMQSRRQSCLPKLIHIDEEKVKNRRGNSMSLSPKSRRTLMKAQGVRQPPATTVV 61
E+TP QR+Q+RRQSCLPKL+ IDE K KNRRGNS SLSPKSRRTL+KAQ VR+ PATT+V
Sbjct: 219 EITPAQRIQNRRQSCLPKLLDIDEVKAKNRRGNSFSLSPKSRRTLIKAQTVRK-PATTIV 278
Query: 62 SKRPAKKDGVLELIQPKKLFKDVEKSV-PASAKRPLRTTGRIVASRYNQTNESSAVATEN 121
SKRP KKDGV E IQPKKLFKDVEKSV P S K+PLR TGRI+ASRYNQTNESS V TEN
Sbjct: 279 SKRPVKKDGVFESIQPKKLFKDVEKSVPPTSVKKPLR-TGRIIASRYNQTNESSQVPTEN 338
Query: 122 RKRSLPGNCKDDASSRYDKRRSSSELAGAR 151
RKRSLPGNCKDD SSRYDKRRSSS+L+ ++
Sbjct: 339 RKRSLPGNCKDDGSSRYDKRRSSSDLSQSK 366
BLAST of Sgr023630 vs. TAIR 10
Match:
AT4G28230.1 (unknown protein; Has 444 Blast hits to 358 proteins in 107 species: Archae - 0; Bacteria - 20; Metazoa - 179; Fungi - 26; Plants - 38; Viruses - 2; Other Eukaryotes - 179 (source: NCBI BLink). )
HSP 1 Score: 91.3 bits (225), Expect = 7.5e-19
Identity = 69/146 (47.26%), Postives = 98/146 (67.12%), Query Frame = 0
Query: 3 LTPVQRMQSRRQSCLPKLIHIDEEKVKNR-RG-NSMSLSPKSRRTLMKAQGVRQPPATTV 62
+TP+Q Q+RR+SC KL I+E +V R +G S+SLSP+SR+ M A ++ ATTV
Sbjct: 184 VTPLQSAQNRRKSCFFKLPGIEEGQVTTRGKGRTSLSLSPRSRKAKMTA--AQKQAATTV 243
Query: 63 VSKRPAKK-DGVLELIQPKKLFKDVEKSVPASAKRPLRTTGRIVASRYNQTNESSAVATE 122
SKR KK +GVL IQPK+LFK+ EK+V S ++PL+ GR+VASRY+Q ++ +
Sbjct: 244 GSKRAVKKEEGVLLTIQPKRLFKEDEKNV--SLRKPLK-PGRVVASRYSQMGKTQTGEKD 303
Query: 123 NRKRSLPGNCKDDASSRYDKRRSSSE 146
RKRSLP + + + R +KRR+S E
Sbjct: 304 VRKRSLPEDEEKENHKRSEKRRASDE 324
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022140574.1 | 1.8e-54 | 83.33 | uncharacterized protein LOC111011196 [Momordica charantia] | [more] |
XP_038900931.1 | 2.8e-52 | 79.33 | uncharacterized protein LOC120087979 [Benincasa hispida] | [more] |
KAA0047899.1 | 3.7e-52 | 79.33 | uncharacterized protein E6C27_scaffold133G001770 [Cucumis melo var. makuwa] | [more] |
XP_008448218.1 | 3.7e-52 | 79.33 | PREDICTED: uncharacterized protein LOC103490474 [Cucumis melo] >ADN33895.1 hypot... | [more] |
XP_011656924.1 | 4.5e-50 | 75.84 | uncharacterized protein LOC105435784 [Cucumis sativus] >KGN46684.1 hypothetical ... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CG24 | 8.6e-55 | 83.33 | uncharacterized protein LOC111011196 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
A0A5A7U374 | 1.8e-52 | 79.33 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3BVB9 | 1.8e-52 | 79.33 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
E5GBQ3 | 1.8e-52 | 79.33 | Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
A0A1S3BJ66 | 1.8e-52 | 79.33 | uncharacterized protein LOC103490474 OS=Cucumis melo OX=3656 GN=LOC103490474 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT4G28230.1 | 7.5e-19 | 47.26 | unknown protein; Has 444 Blast hits to 358 proteins in 107 species: Archae - 0; ... | [more] |