Sgr023624 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr023624
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	H/ACA ribonucleoprotein complex non-core subunit NAF1
Location	tig00000892: 5097394 .. 5105887 (+)
RNA-Seq Expression	Sgr023624
Synteny	Sgr023624

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGGAAAACCTCAAAACCCGTCGTATCGCTTCTCCACAACCCACTAGGGTTTAAGAAACCAACCAGAGCCCTCCTATTTACAATTCTGCCGTATTTTTCTTCTTTAAAAGCTATGTTTACGCCGGTTCTTTCTGAATCAAGTCCCAATTTTGGAGGTCTGCAATGGTAGAGTTTAAGTCGAAGTCGAACTCCACCAGTGCGTCTACTCCCGACTCTCTCCCCCAAGCTTCTAAGCTTAACAAGTCGGAGCCACTTGACGCTTTTGATTCAAAGCCCAACGATTACTCCTTTGCCGATTCCTTCCTCGATTACGATTCTTTAAACGACTGGATTGAGGAATTAACATCCCCGGCTATGCTGATGCAGAAACGGTTGTTCCTGAAGCACCAGGGAAGCGCTTGGATTCGACTGTAGAAGAAGGCCATTTGAATCAACAAAATGCGCCAGCGTCCGACCCAACCGTCGAAAGGCCTGTTCCAGTTGTCGGTGAAGTTCAGCCGATTGTTGTCGGGTCTGAACCAGTTGTACAGGCGACTGGTGAGGCTTGTGATAAGTCGAGGGATTTGAATTGCATCATTGAGGAAGGGATGTCAAAGGTTAGTTTGGTTACTGGGTCTGGAAGCTTGGTTCTTGATGGTGGGAGCACGAGGAACATTGAGTTGGAGTGTCAAGAGGATGACGGTGAAAGTGATGTTGAGTCCGAGGGCACAAGTTCAGCTACAACATCTAGTAGCAGTAGCTATGGCAGAGGCAGGAATGATGAAAAAGATGACGAGGAAGAAAATTCATCGTCTTCTAGTAGCGGCGACAGCAGCTCCGATGATGAAGAAGAGGAGAACGAGTTCACCGTAAACGCGGAGGGACATGGAGAAATCGCTGACCTCGAAGAAGGTGAGATAAGGGACGTTGACAATGAAGACGAAGAGGCTACTGCGGATCATATGGTTGCGTGGGATGGTGATTGTGAGGATCCCGACATAGAAGATGATGAAGAGGCTGGGGTTGAGGGAGGGCCCATTAGTTCTAAAAATGAGCTTAAGGTCTGCTTTCTGTTCTCATCATTGATGTTTGCTAGTAGTCTTTTGCTCTTTGTATGAGTAAATGGAGGCTGTTATGGATACCCACGGTTGATGCTGCTTAGCGTAATTGATTCATAATCAGTATTAGTGTATTACTTCTTTTTGGCTTGCTTGCAGGTTCTTCCTCCAGTTCCTCGAGTGTATGCAACACTTCAGCCACACCACCGGATGCTTCCTGTTGGAGTTGTTTTGTCAGTAAGCTCCTTAATTTTAATAGAATTATACGGCAAAGAATACTCCAATTCTTTCTACATCTGCCCGTTAGATGGTTTTCCTTGCTTATGAAACTAAATGATCCATAAGAAGCGCCTTTTTTGAGTATGGATGTTATGCAATTGTCCTTGTGATTCGTGATAAATTTTATGTTCTGTTCTGTTTCTACTTTTCAGATAATTGGCAATCAAGTCATTGTAGAAGGTGTTGAGAAGCACAATCCTCTTAACGAAGGCTCTATCCTCTGGATAACTGAAACTAGATCCCCACTGGGGTTAGTAGATGAAATCTTTGGACCAGTAAAAAATCCTTATTATTCAGTGAGATACAATTCTGAAAGTGAAGTTCCTACTGGAATTTGTGGAGGCACTCACGTCTCTTTTGTTCTGGAGTTTGCCGATTATGTGCTCAACAGCAAAGACTTGTACAAGAAGGGGTATGATGCATCTGGAGTGAATGATGAAGAGGTGTCAGATGATGATGAGTTTTCAGATGATGAGAAAGAGCTTGAGTTCAAGAAAATGCAAAGGTTGGCTAAGAGGACTATGAATGACAGCCAGAAAACTGGGAACAGAAATAACGCTAGAAAGAAGAAAAACTCGGCTCAAGCCAAGAAATTTGGTCAGCGTACATCTCAGAATGCAAAGATACCTGATGAGTCCAGAAAATACGGTCAGCCCACACCCCAGCAAGCAAAGATGGATATGGTTCGGCCATTTTCCAATCAAAACCAGCACACTGGCCCTCCTTTGGCTCCATTTGTATATCAGGGTGGTGGTCCGAACGCTTCAGCTGCAGAACAATGTTTTATGAACGGAACTGGTGTTCTTCCATCTTTTCCACCAACGTACAACCCCTGCTTTACCCCAGCATTGAATGGAATTAGGCCAACTGAAATGCCATTTCAGCTTCAGCAGCAGCAAATTCCGTTCTTTCCAAACGCTCTTCCAATGAATGGCATGCCATGGCTTTTACAGAATCCTGCCCAGCAAGTGCCTCAAATGCCTATGCTGAATACATTTGCAGGAGCAGCATATCCGCAGGGGCTCGTAGGTACATCACCCAGCCTACCTAATCCTTTAACAAGCGTAGGGGCACAAGGAATCCATTCCGCTGGACTACAGTTTGGACAGAATCAAAACTTGCAGCCTCCCCTTGCCATCCCAGGAAGCATGGAAGTGAAACAGCAATTCAATCCAGTGAACTCGCACCCACCCGTTGCATTTCCAGGAAACGTAGCACCACAGCAATTCAACCCAGGCTCATCTTCAAGCCAGGGAAGGAAATCTTATGGTCGAGGTGGTCCTCATTTTAGAGGTAGAAGAGGTTGGCGACAAACAAAATGAACCTTATAATTGTTTCGTCTTCGTGCTAAGAGGGGATATAGGTTGGTTGCATATGTGCAATTACTGCATTTTGATTTAGATCTTTCATGTAAATCCTACCACCATTCCAGGTTGGATGAGAATTACAAAATGCTCGACTGGTCGTCAAAGTATAATGCTGAAGTTTGTATTTTAATCATTTTAGAAGGGTTTTTCTTTTTCCTTATCACTTGGTGGCTCCATAACTGCATATACCTTTAGGTAAGAAGCATTTCATTAATAAGATGAAATTACAAAAAGGAGCGGAGAACACCCCATATCCAAAGGAAATTACAAAACACTTCCATTGAGCTATAAAGCTATGAAAGTATGATGAGAATTTACACTAAGTGAAGGCCGTAATATTCAAAATCTCTCTCCTTTTCCTTGAAAACACGATTGTTTCTTTCGTTCCAAATGGCCCATAAAAAGGCTCCATAACTGCATATTACTGAATGAAATAATAAGAATCGGGACTTGCTGAAAGCTACCCAGTTGCAAATGATTGGATTGAAAATTTCGGAATCAATAGATAACACCGTTGAATGCGAAAAGACAATATTGGGGATTCAAGTTTCAAATAAATTCAAGGAATATCCAGATAGAAAAAATTGTAGGTGGGAGTAGGTGAGAGCAGCTTCAAGCTTTTGCATTTCTTGTGAAATCAATGCAGGTCTGGCAGCTGCAATCTGAGAAACGGCATGTCTCACACCCAAAGCACACACACGAAGTGCAGCCCTTACAAGTCGGCGAACGAGTGCAGCCTCTGTAAACCTTGCGACTTGCTCTTTCTTCATCATCATCACATGTTATTCTGAGCAACACAAAACAGAATCGTTCGTTAGTGTACATGTATACAGCTACAATGTCAAAGCTTGAACAAAAACCATAGATAGGCACGGATGTGTGTAATAAGTTCATATGTTCATATATCAGGCTGGCAGTTTAGATTTGCTCTTAATACAATGTCTTGTATATGTAATTCCTTGCATACTGAAATAAACACCCGATGTTCTAATATGCATACCTAACAACTAAAGATATGCAAGAAACTTATCTTCTTGATTTAGGACCCCACGAGTAATAGAAGAGGGAAGTGGCAGCTGCACACTGCCCCATCAGAGATATGGCTACTTCTCAAAATTCAAGGAACAGATAATCTTTCGACAGAAGTTACTCGTTCATAATCACTTGCACGTGAAATACAAAACCAGCAATGGTATAAAGACATAACAGCATCAATTAGTTGTGGTTAAAGCAATCCTTCTCAGTAGAGCTCCCTAGCATCACGATAATTTACATTAGAAAGTTCTACTTTGCTGCAGTTATGGCCTTTGGTTCATATCTAACATGCCACCTTTCTTCAGAAGACAGACCTCTCATTTTGAAGTAAATAAAGCGTGAGGTTCAAATTTTATCACTTGTAAGGTCCTACACTACATCAAGATGCAAGTCCAAAATAATGCTATGATTAAGGAAGCAGTTTTGATGATTTGACTCAATGAAACTAGCCTGTGTTTGCTAAATCTGTGCATTGAAACATCATCTTACCTCAAATTGACTTTTCTACAAGGAAGTTATAAAGGACCGATACCACTAGGTATAACAAGAGGATGATTCTGGCTTCAAATATTGTAGTTTCATATAGCATTTGCAGAGAACAATAAGAAAGAGAACAAGAAAAGAAATGCATGTAAAAGGATCAAAATCATGTAATGCATCAGCAAAATCAGACTATCTAACAGTAGAGCACCTTGCTAAACCATGAGAAGTGTCTGAATTGGTAAACGTCTTTTCTCCTCTAACTCGGAATCACTTACAGTGGACTAAAGATCATATTCTCTACAAATTTTCAGCAAGTACAAATTTCTGATTTTACACATCTAACAATGTTTAATGACTTTGACAATATGTTATTGGCCATGATTGCATTCTCTATCTCATCCCCCAGGTGCTACTAATTAACTTTGCCAGGTAAAGTTTATGCCATAAAAAGATTTAAATGGACTTCCATATTAGTAGTCTTGTTGCAGTGACATATTGAAGAAAGTTCCTCAATGTTAAGTTTATTCCAAGCTTCTTTGGATACAGCACAAGCTTAATCTTAATCTTCACATTGGCATATATTAAACTTACAGTATCACAAAACTAAATGAATAAAATTAATAACCAAGCTGAAGATGATTCAAGATGTCAAGATATTATAAAGCTATTTAGAGGAATAAATAAACTATAAAAATGCATATGAAATAAACAGTGAAAAAATAATTATGATGGCTAGCAGAATTCATATAGAAAACATACCATCATTTTAAACATGAAATCCATCACAATATCTATTTAAACCTAATGTGCGTGAAAATATTATAAGCAGCATACTTATGAGAAAGAATTTATTCTCTCTTGATATATATATTAGGAATAACAATAAATCAACAAATAACAAGGTTAATGGTATTTGTATTAAATTAAGCATGAATTAAATAATATCAAGAGTTTAGACTAAAGATATACTTATCATAAGGCCAATCCGAACACTTCCAATCCATATCTGCTAAGGCATCATGGTAAGTCCGACATTCTTCCTTCATCCGTAGACGGAATCTGCGCTCCTTGCTGCACCTACTACAGTGAACAAATTCATCACGGTGAAAGACTCGTCCATTATGAGATCTACTTGACCCGTTAGCTGTCCTTGATGACTGGTTGTAGTATTTGAGTAACACTGTCTTGTACAGCGGAACCTTTTCACCATTAACTATGACCCAGACATTGTTCTTCCATTTTCTAGCTGTCTCTCTTCCAGAATGCTTTTCAAATGCAGCAGGTGTCAACTTGCCTAGTGTTCAGATCACCAAAACCATAATGGAAAATCAAAATAAATAAAGGGGTATTCTAATAATTAAAATGTAGGAACATGCAATTTAAAAACCCATGGAAACAGCATCGTGAGCATATACAACAACAAAGAAAGCCCTCCTGAATGTGTAAAGCAGAGTTGAAGGTCGATTGCTGCTGCAGTCTAAGGAATAGTGTTCAAATGAACAAGTACCTCAATTGCAGTTACAGTGAAAAAATTATGGCGATCTAAACGCTAGACAAGTCTTCTAAAGATGATACCGACAGAATATACTAACTAAAGCTTGATGGATACATAAATTGATAGTTCCTCCCTAATTATAAATCATCAAACATTCTGAGATTAATCTCATAGAATTGGACATCATATCCTCAGCATCCAAGATTTGAAATGATAAGACATCAGCAGTAGGGAAAATAACATCAGTACAATTATTCCATATTCTTAGCATGGATCATCCTAAATGGAAAGTTAAAATCCCAAATATACTGATCTAAGATTAAATGGAGATTCAGATTGACTTTGTTTTCAAACAGAATCTAAGACGAAAAGCTAAGATAAAAACTTGACTGTGAAAGAATACCCTCACGAACAAGTAGTCAAAAACCAATATAAAACATCCGTGTAAGCAAGAAGGCTAGTCAGACGACATCTTACTCTGCCAAACACAAGGAACAGATGTTGGAATCAAATGAAATCTCAGTAACAAGCTAGCTAGTGTACCAAATGTAGCAAAACAATGATGGAGCTTAAGTGCTAAACTGTCTTCCATCAACGAGAAAGACGTATAAAAACCAAACCAGCCTCAGCACTATCTTGCGACTTGCAAGCTGCTTCCTTCGGTCAGACAAAACAACATACATTTGAACTGTATGACGAACAAATAACGAACAGCGTGCACTGCAGAGCAAAGCTACCTATCGTAGCAATTGACGATAGAAACTGAAGAACATCAACGTAAAACCCATTTCACAATAACTCAGAGAAATACTACACAACCCCAACATGCATAAAATCCAAAACCATATTTTCTCGAAAACAGAAAAGATTCGCCTGAAACTCGAATATACGCGCATTTAACATGCAAAATAGCGAACATCCATTCCAGGAAAAAGCGAAGGAAGACAGAGAAAGAGAAATAGAAAGAGAGAGAGAAAGACCTTCCTGACAACCAGGGGTGCACTCGCAGGTGATTTCGAGGTCACCATTAACAAAAACCCTAAGCCTCCCAACAGCATCACCATACCTGTGGCTGGTACACCCACAAGTTACCTCTATATGGTCTCCACTTCTCTTAATCCCGCTCATCTCACTCAGCTCCCCATCGCTAAAGATGGTCAACCCCACTTCTCTCTCAACTCCATTGGCCATTTTTTCTCTTCCACGGCACTCTCTCTCTAACTTTGGACCAAGAGGAGGGAAAAAAACACTTCCTTTATAATGCAAAGTCGATAAACCCAGAAGGAATATCGAAGTGAAATCAAAGAAAAATCTAAAAGATTTCGGAAAGGAAAGGGCTCGCTAAGAAAAATAAATGGGTTATTGGGGAAATAACATTTAAAAAATTTTCAGAAAACCGCGAAGTGTTTCAATAAGCACGCATCTCCAAGGATCACCCCGAGAGATCTGGTGGAAAAAAGGTTGAAGGAGTTAGATGGAGAGAACCTAGATAGAGAAAGAGAAAGAAGGTTTGGTAATGGGGTTGAATGAATGAGTGAGCTGGCTATCAGGAAAACAAATGTCGTGGGGCGGTAGGGTGGGGGGCGGTTAAAGGCTTAGAGAGCTATTTGCATGATATGACGCTAGAGAAAGAGAGGAAGAGATGGAGAGAGAAACAAGAGGGCCTTCAGCCTTGGGGTTTTTCTTTTGTGGCTTTTGGTTTATCGGAAATATCTCTGTGTGGAGGGAGACGAGGTCCGTCGAAATGCGTTTCCTTCATTTTTATTTATTTTCATATATATAATTAACACTTGCTAATTATCAGTTCCCCCTTTTGCTGTCGTCTTTTTATTTAATTTGTTCCCAAGACGCACTGTTTTCAGGAATGTACTTCAGCAACTGATACCTCTTTTCGATAAGTTCAAAGTAGTTTTATTTTACAGTACACGAGAGTACTTATTTTAATAAAAATTACCAATAATAATAATGCTCAATTACAAGCTTTCTGAATCATCTTAGAAAATATTTGCGGATTCAGATCACGAGTCACAACCAACGATGCATTAAGCTTAAACTTTAAGCATTGCTTTAACTTTTCTAGCTAGCTAATAGGGTCTCACAATCCCACCATTAATTTTTTGACCCAAAATGGGTATCATCTTCAAGACAGCATTTTGATGTTACATTCAAGCACAAGCACAGGCACGGAGATACTCTCACACTGAAAAGAGAGAGAGCACAGCCTTCATTTGCCGACCCAGAAACTAAAACTCACTAGAGTGAGTTTTCCCGAAGGAAAGAAGTGAGTTTGGGCATTTGGGGTCTTCAGTTTTGTCCAAATGTGTTGTTTGATCGATGAGCTGAATCCCTCTCTGATTGCTTTACTCCCAACTTTTAATTTTTCCTGACTGAGCCATGACGACATTGATAATTGGATAAGTAAACAGAATGGTTGAGTGCAATGCATGGAGTGTGCATGATGGACACCCACAGCCTACCTTAAATCTTGTCAACAATAATCAACCATCGTGCCGGATTGGGCTGTCTTCGTTCTCGCACATTAGTGATATCTCCTCAGATGAGCTCACACTTGATCGTCTACAGCACAACAAAGTACCTTTTTCCGCCACTTCAACATATATTTTTGATCGGCTAGCGGGTGTTTTGCTTTCATGCAGTCGCCGTCTCGCCGTCTTGGGGTCTGCGATTGATATCTTCAGGAATTCTGGTCGGTTCTTCTCACAAGTATTTATCGAGCTGCAATGCCCTGCCCTGTCTGCACACCAAGCAATGCACGACTTTCAGCCTGATTAA

mRNA sequence

ATGGATGGGAAAACCTCAAAACCCGTCGTATCGCTTCTCCACAACCCACTAGGGTTTAAGAAACCAACCAGAGCCCTCCTATTTACAATTCTGCCGTATTTTTCTTCTTTAAAAGCTATGTTTACGCCGGTTCTTTCTGAATCAAGTCCCAATTTTGGAGGAATTAACATCCCCGGCTATGCTGATGCAGAAACGGTTGTTCCTGAAGCACCAGGGAAGCGCTTGGATTCGACTGTAGAAGAAGGCCATTTGAATCAACAAAATGCGCCAGCGTCCGACCCAACCGTCGAAAGGCCTGTTCCAGTTGTCGGTGAAGTTCAGCCGATTGTTGTCGGGTCTGAACCAGTTGTACAGGCGACTGGTGAGGCTTGTGATAAGTCGAGGGATTTGAATTGCATCATTGAGGAAGGGATGTCAAAGGTTAGTTTGGTTACTGGGTCTGGAAGCTTGGTTCTTGATGGTGGGAGCACGAGGAACATTGAGTTGGAGTGTCAAGAGGATGACGGTGAAAGTGATGTTGAGTCCGAGGGCACAAGTTCAGCTACAACATCTAGTAGCAGTAGCTATGGCAGAGGCAGGAATGATGAAAAAGATGACGAGGAAGAAAATTCATCGTCTTCTAGTAGCGGCGACAGCAGCTCCGATGATGAAGAAGAGGAGAACGAGTTCACCGTAAACGCGGAGGGACATGGAGAAATCGCTGACCTCGAAGAAGGTGAGATAAGGGACGTTGACAATGAAGACGAAGAGGCTACTGCGGATCATATGGTTGCGTGGGATGGTGATTGTGAGGATCCCGACATAGAAGATGATGAAGAGGCTGGGGTTGAGGGAGGGCCCATTAGTTCTAAAAATGAGCTTAAGGTTCTTCCTCCAGTTCCTCGAGTGTATGCAACACTTCAGCCACACCACCGGATGCTTCCTGTTGGAGTTGTTTTGTCAATAATTGGCAATCAAGTCATTGTAGAAGGTGTTGAGAAGCACAATCCTCTTAACGAAGGCTCTATCCTCTGGATAACTGAAACTAGATCCCCACTGGGGTTAGTAGATGAAATCTTTGGACCAGTAAAAAATCCTTATTATTCAGTGAGATACAATTCTGAAAGTGAAGTTCCTACTGGAATTTGTGGAGGCACTCACGTCTCTTTTGTTCTGGAGTTTGCCGATTATGTGCTCAACAGCAAAGACTTGTACAAGAAGGGGTATGATGCATCTGGAGTGAATGATGAAGAGGTGTCAGATGATGATGAGTTTTCAGATGATGAGAAAGAGCTTGAGTTCAAGAAAATGCAAAGGTTGGCTAAGAGGACTATGAATGACAGCCAGAAAACTGGGAACAGAAATAACGCTAGAAAGAAGAAAAACTCGGCTCAAGCCAAGAAATTTGGTCAGCGTACATCTCAGAATGCAAAGATACCTGATGAGTCCAGAAAATACGGTCAGCCCACACCCCAGCAAGCAAAGATGGATATGGTTCGGCCATTTTCCAATCAAAACCAGCACACTGGCCCTCCTTTGGCTCCATTTGTATATCAGGGTGGTGGTCCGAACGCTTCAGCTGCAGAACAATGTTTTATGAACGGAACTGGTGTTCTTCCATCTTTTCCACCAACGTACAACCCCTGCTTTACCCCAGCATTGAATGGAATTAGGCCAACTGAAATGCCATTTCAGCTTCAGCAGCAGCAAATTCCGTTCTTTCCAAACGCTCTTCCAATGAATGGCATGCCATGGCTTTTACAGAATCCTGCCCAGCAAGTGCCTCAAATGCCTATGCTGAATACATTTGCAGGAGCAGCATATCCGCAGGGGCTCGTAGGTACATCACCCAGCCTACCTAATCCTTTAACAAGCGTAGGGGCACAAGGAATCCATTCCGCTGGACTACAGTTTGGACAGAATCAAAACTTGCAGCCTCCCCTTGCCATCCCAGGAAGCATGGAAGTGAAACAGCAATTCAATCCAGTGAACTCGCACCCACCCGTTGCATTTCCAGGAAACGTAGCACCACAGCAATTCAACCCAGGCTCATCTTCAAGCCAGGGAAGGAAATCTTATGGTCGAGGTGGTCCTCATTTTAGAGGTAGAAGAGATCTTTCATGTAAATCCTACCACCATTCCAGGTTGGATGAGAATTACAAAATGCTCGACTGGTCGTCAAAGTCTGGCAGCTGCAATCTGAGAAACGGCATGTCTCACACCCAAAGCACACACACGAAGTGCAGCCCTTACAAGTCGGCGAACGAGTGCAGCCTCTGTAAACCTTGCGACTTGCTCTTTCTTCATCATCATCACATGACCCCACGAGTAATAGAAGAGGGAAGTGGCAGCTGCACACTGCCCCATCAGAGATATGGCTACTTCTCAAAATTCAAGGAACAGATAATCTTTCGACAGAAGTTACTCGTTCATAATCACTTGCACGTGAAATACAAAACCAGCAATGGTGATTTCGAGGTCACCATTAACAAAAACCCTAAGCCTCCCAACAGCATCACCATACCTGTGGCTGGTACACCCACAAGTTACCTCTATATGGTCTCCACTTCTCTTAATCCCGCTCATCTCACTCAGCTCCCCATCGCTAAAGATGGGTGGGGGGCGGTTAAAGGCTTAGAGAGCTATTTGCATGATATGACGCTAGAGAAAGAGAGGAAGAGATGGAGAGAGAAACAAGAGGGCCTTCAGCCTTGGGGTTTTTCTTTTGTGGCTTTTGGTTTATCGGAAATATCTCTGTGTGGAGGGAGACGAGTAAACAGAATGGTTGAGTGCAATGCATGGAGTGTGCATGATGGACACCCACAGCCTACCTTAAATCTTGTCAACAATAATCAACCATCGTGCCGGATTGGGCTGTCTTCGTTCTCGCACATTAGTGATATCTCCTCAGATGAGCTCACACTTGATCGTCTACAGCACAACAAAGTACCTTTTTCCGCCACTTCAACATATATTTTTGATCGGCTAGCGGGTGTTTTGCTTTCATGCAGTCGCCGTCTCGCCGTCTTGGGGTCTGCGATTGATATCTTCAGGAATTCTGGTCGGTTCTTCTCACAAGTATTTATCGAGCTGCAATGCCCTGCCCTGTCTGCACACCAAGCAATGCACGACTTTCAGCCTGATTAA

Coding sequence (CDS)

ATGGATGGGAAAACCTCAAAACCCGTCGTATCGCTTCTCCACAACCCACTAGGGTTTAAGAAACCAACCAGAGCCCTCCTATTTACAATTCTGCCGTATTTTTCTTCTTTAAAAGCTATGTTTACGCCGGTTCTTTCTGAATCAAGTCCCAATTTTGGAGGAATTAACATCCCCGGCTATGCTGATGCAGAAACGGTTGTTCCTGAAGCACCAGGGAAGCGCTTGGATTCGACTGTAGAAGAAGGCCATTTGAATCAACAAAATGCGCCAGCGTCCGACCCAACCGTCGAAAGGCCTGTTCCAGTTGTCGGTGAAGTTCAGCCGATTGTTGTCGGGTCTGAACCAGTTGTACAGGCGACTGGTGAGGCTTGTGATAAGTCGAGGGATTTGAATTGCATCATTGAGGAAGGGATGTCAAAGGTTAGTTTGGTTACTGGGTCTGGAAGCTTGGTTCTTGATGGTGGGAGCACGAGGAACATTGAGTTGGAGTGTCAAGAGGATGACGGTGAAAGTGATGTTGAGTCCGAGGGCACAAGTTCAGCTACAACATCTAGTAGCAGTAGCTATGGCAGAGGCAGGAATGATGAAAAAGATGACGAGGAAGAAAATTCATCGTCTTCTAGTAGCGGCGACAGCAGCTCCGATGATGAAGAAGAGGAGAACGAGTTCACCGTAAACGCGGAGGGACATGGAGAAATCGCTGACCTCGAAGAAGGTGAGATAAGGGACGTTGACAATGAAGACGAAGAGGCTACTGCGGATCATATGGTTGCGTGGGATGGTGATTGTGAGGATCCCGACATAGAAGATGATGAAGAGGCTGGGGTTGAGGGAGGGCCCATTAGTTCTAAAAATGAGCTTAAGGTTCTTCCTCCAGTTCCTCGAGTGTATGCAACACTTCAGCCACACCACCGGATGCTTCCTGTTGGAGTTGTTTTGTCAATAATTGGCAATCAAGTCATTGTAGAAGGTGTTGAGAAGCACAATCCTCTTAACGAAGGCTCTATCCTCTGGATAACTGAAACTAGATCCCCACTGGGGTTAGTAGATGAAATCTTTGGACCAGTAAAAAATCCTTATTATTCAGTGAGATACAATTCTGAAAGTGAAGTTCCTACTGGAATTTGTGGAGGCACTCACGTCTCTTTTGTTCTGGAGTTTGCCGATTATGTGCTCAACAGCAAAGACTTGTACAAGAAGGGGTATGATGCATCTGGAGTGAATGATGAAGAGGTGTCAGATGATGATGAGTTTTCAGATGATGAGAAAGAGCTTGAGTTCAAGAAAATGCAAAGGTTGGCTAAGAGGACTATGAATGACAGCCAGAAAACTGGGAACAGAAATAACGCTAGAAAGAAGAAAAACTCGGCTCAAGCCAAGAAATTTGGTCAGCGTACATCTCAGAATGCAAAGATACCTGATGAGTCCAGAAAATACGGTCAGCCCACACCCCAGCAAGCAAAGATGGATATGGTTCGGCCATTTTCCAATCAAAACCAGCACACTGGCCCTCCTTTGGCTCCATTTGTATATCAGGGTGGTGGTCCGAACGCTTCAGCTGCAGAACAATGTTTTATGAACGGAACTGGTGTTCTTCCATCTTTTCCACCAACGTACAACCCCTGCTTTACCCCAGCATTGAATGGAATTAGGCCAACTGAAATGCCATTTCAGCTTCAGCAGCAGCAAATTCCGTTCTTTCCAAACGCTCTTCCAATGAATGGCATGCCATGGCTTTTACAGAATCCTGCCCAGCAAGTGCCTCAAATGCCTATGCTGAATACATTTGCAGGAGCAGCATATCCGCAGGGGCTCGTAGGTACATCACCCAGCCTACCTAATCCTTTAACAAGCGTAGGGGCACAAGGAATCCATTCCGCTGGACTACAGTTTGGACAGAATCAAAACTTGCAGCCTCCCCTTGCCATCCCAGGAAGCATGGAAGTGAAACAGCAATTCAATCCAGTGAACTCGCACCCACCCGTTGCATTTCCAGGAAACGTAGCACCACAGCAATTCAACCCAGGCTCATCTTCAAGCCAGGGAAGGAAATCTTATGGTCGAGGTGGTCCTCATTTTAGAGGTAGAAGAGATCTTTCATGTAAATCCTACCACCATTCCAGGTTGGATGAGAATTACAAAATGCTCGACTGGTCGTCAAAGTCTGGCAGCTGCAATCTGAGAAACGGCATGTCTCACACCCAAAGCACACACACGAAGTGCAGCCCTTACAAGTCGGCGAACGAGTGCAGCCTCTGTAAACCTTGCGACTTGCTCTTTCTTCATCATCATCACATGACCCCACGAGTAATAGAAGAGGGAAGTGGCAGCTGCACACTGCCCCATCAGAGATATGGCTACTTCTCAAAATTCAAGGAACAGATAATCTTTCGACAGAAGTTACTCGTTCATAATCACTTGCACGTGAAATACAAAACCAGCAATGGTGATTTCGAGGTCACCATTAACAAAAACCCTAAGCCTCCCAACAGCATCACCATACCTGTGGCTGGTACACCCACAAGTTACCTCTATATGGTCTCCACTTCTCTTAATCCCGCTCATCTCACTCAGCTCCCCATCGCTAAAGATGGGTGGGGGGCGGTTAAAGGCTTAGAGAGCTATTTGCATGATATGACGCTAGAGAAAGAGAGGAAGAGATGGAGAGAGAAACAAGAGGGCCTTCAGCCTTGGGGTTTTTCTTTTGTGGCTTTTGGTTTATCGGAAATATCTCTGTGTGGAGGGAGACGAGTAAACAGAATGGTTGAGTGCAATGCATGGAGTGTGCATGATGGACACCCACAGCCTACCTTAAATCTTGTCAACAATAATCAACCATCGTGCCGGATTGGGCTGTCTTCGTTCTCGCACATTAGTGATATCTCCTCAGATGAGCTCACACTTGATCGTCTACAGCACAACAAAGTACCTTTTTCCGCCACTTCAACATATATTTTTGATCGGCTAGCGGGTGTTTTGCTTTCATGCAGTCGCCGTCTCGCCGTCTTGGGGTCTGCGATTGATATCTTCAGGAATTCTGGTCGGTTCTTCTCACAAGTATTTATCGAGCTGCAATGCCCTGCCCTGTCTGCACACCAAGCAATGCACGACTTTCAGCCTGATTAA

Protein sequence

MDGKTSKPVVSLLHNPLGFKKPTRALLFTILPYFSSLKAMFTPVLSESSPNFGGINIPGYADAETVVPEAPGKRLDSTVEEGHLNQQNAPASDPTVERPVPVVGEVQPIVVGSEPVVQATGEACDKSRDLNCIIEEGMSKVSLVTGSGSLVLDGGSTRNIELECQEDDGESDVESEGTSSATTSSSSSYGRGRNDEKDDEEENSSSSSSGDSSSDDEEEENEFTVNAEGHGEIADLEEGEIRDVDNEDEEATADHMVAWDGDCEDPDIEDDEEAGVEGGPISSKNELKVLPPVPRVYATLQPHHRMLPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNSKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRTMNDSQKTGNRNNARKKKNSAQAKKFGQRTSQNAKIPDESRKYGQPTPQQAKMDMVRPFSNQNQHTGPPLAPFVYQGGGPNASAAEQCFMNGTGVLPSFPPTYNPCFTPALNGIRPTEMPFQLQQQQIPFFPNALPMNGMPWLLQNPAQQVPQMPMLNTFAGAAYPQGLVGTSPSLPNPLTSVGAQGIHSAGLQFGQNQNLQPPLAIPGSMEVKQQFNPVNSHPPVAFPGNVAPQQFNPGSSSSQGRKSYGRGGPHFRGRRDLSCKSYHHSRLDENYKMLDWSSKSGSCNLRNGMSHTQSTHTKCSPYKSANECSLCKPCDLLFLHHHHMTPRVIEEGSGSCTLPHQRYGYFSKFKEQIIFRQKLLVHNHLHVKYKTSNGDFEVTINKNPKPPNSITIPVAGTPTSYLYMVSTSLNPAHLTQLPIAKDGWGAVKGLESYLHDMTLEKERKRWREKQEGLQPWGFSFVAFGLSEISLCGGRRVNRMVECNAWSVHDGHPQPTLNLVNNNQPSCRIGLSSFSHISDISSDELTLDRLQHNKVPFSATSTYIFDRLAGVLLSCSRRLAVLGSAIDIFRNSGRFFSQVFIELQCPALSAHQAMHDFQPD

Homology

[Close]

BLAST of Sgr023624 vs. NCBI nr
Match: XP_022149469.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia] >XP_022149470.1 H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia])

HSP 1 Score: 968.8 bits (2503), Expect = 3.8e-278
Identity = 520/659 (78.91%), Postives = 561/659 (85.13%), Query Frame = 0


Query: 58  PGYADAETVVPEAPGKRLDSTVEEGHLNQQNAPASDPTVERPVPVVGEVQPIVVGSEPVV 117
           P   DA+TV+P+A          E HLNQ NA  S+PTVE      G  QP+V  S PVV
Sbjct: 60  PVMVDAKTVLPKA----------EVHLNQANASVSNPTVE------GPAQPVVAVSVPVV 119

Query: 118 QATGEACDKSRDLNCIIEEGMSKVSLVTGSGSLVLDGGSTRNIELECQEDDGESDVESEG 177
           QA+ EA DKSRDLN IIEEGMSKVSLVTGS       GST NI+LEC++D+ ESDVESEG
Sbjct: 120 QASIEASDKSRDLNGIIEEGMSKVSLVTGS-------GSTGNIDLECRKDESESDVESEG 179

Query: 178 TSSATTSSSSSYGRGRNDEKDDEEENSSSSSSGDSSSDDEEEENEFTVNAEGHGEIADLE 237
           TSSATTSSSSS+GRGRNDEKD+EEENSSSSSS DSS DDEEEEN+FT+ AEGHGEI +LE
Sbjct: 180 TSSATTSSSSSHGRGRNDEKDEEEENSSSSSSDDSSCDDEEEENKFTMKAEGHGEIGELE 239

Query: 238 EGEIRDVDNEDEEATADHMVAWDGDCEDPDIEDDEEAGVEGGPISSKNELKVLPPVPRVY 297
           EGEIRDV++EDEEA+ D MVAWDGD  DPDI+DDEE GVEGGPISSKNELKVLPPVP+VY
Sbjct: 240 EGEIRDVEDEDEEASTDQMVAWDGDGGDPDIDDDEEVGVEGGPISSKNELKVLPPVPQVY 299

Query: 298 ATLQPHHRMLPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGLVDEIFGPVK 357
           ATLQP H+++PVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGL+DEIFGPVK
Sbjct: 300 ATLQPQHQIIPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGLIDEIFGPVK 359

Query: 358 NPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNSKDLYKKGYDASGVNDEEVSDDDE 417
            PYYSVRYNSESEVPTGICGGT VSFVLEFADY+LN+KDLYKKGYDASGVNDEEVSDDDE
Sbjct: 360 YPYYSVRYNSESEVPTGICGGTRVSFVLEFADYILNNKDLYKKGYDASGVNDEEVSDDDE 419

Query: 418 FSDDEKELEFKKMQRLAKRTMNDSQKTGNRNNARKKKNSAQAKKFGQRTSQNAKIPDESR 477
           FSDDEKELEFKKMQRLAKR+ N++QK GN NN RKKKNS QA+KFGQRT QNAKIP+ESR
Sbjct: 420 FSDDEKELEFKKMQRLAKRSTNNNQKNGNGNNTRKKKNSGQARKFGQRTYQNAKIPNESR 479

Query: 478 KYGQP----------------TPQQAKMDMVRPFSNQNQHTGPPLAPFVYQGGGPNASAA 537
            YG+P                TPQQAKMDMV+P SNQNQH GPP APFVY GG PN SAA
Sbjct: 480 NYGEPTPQQAMMTEGSKFVQHTPQQAKMDMVQPSSNQNQHNGPPYAPFVYHGGCPNPSAA 539

Query: 538 EQCFMNGTGVLPSFPPTYNPCFTPALNGIRPTEMPFQLQQQQIPFFPNALPMNGMPWLLQ 597
           EQCF+NG+GV+PSFPPTY+PCFTPA+NGIRPTEMPF LQQQQ PFFPNALPMNGMPWLLQ
Sbjct: 540 EQCFINGSGVIPSFPPTYSPCFTPAMNGIRPTEMPFHLQQQQNPFFPNALPMNGMPWLLQ 599

Query: 598 NPAQQVPQMPMLNTFAGAAYPQGLVGTSPSLPNPLTSVGAQGIHSAGLQFGQNQNLQ--P 657
           NPAQQVPQMPM+NTF GAAYPQGL+GTSPSLPNPLTSVG QGIHS GLQFGQNQNLQ  P
Sbjct: 600 NPAQQVPQMPMMNTFGGAAYPQGLIGTSPSLPNPLTSVGTQGIHSGGLQFGQNQNLQPPP 659

Query: 658 PLAIPGSMEVKQQFNPVNSHPPVAFPGNVAPQQFNPGSSSSQGRKSYGR-GGPHFRGRR 698
           PLAIPGSME  Q FNP NSHP  AFPGNVAP QFNP SSSSQGRKS+GR GG HFRGRR
Sbjct: 660 PLAIPGSMEATQLFNPANSHPLGAFPGNVAPPQFNPDSSSSQGRKSHGRGGGSHFRGRR 695

[Close]

BLAST of Sgr023624 vs. NCBI nr
Match: XP_022150383.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia])

HSP 1 Score: 944.9 bits (2441), Expect = 5.9e-271
Identity = 516/661 (78.06%), Postives = 554/661 (83.81%), Query Frame = 0


Query: 58  PGYADAETVVPEAPGKRLDSTVEEGHLNQQNAPASDPTVERPVPVVGEVQPIVVGSEPVV 117
           P   DA+TV+P+A          E HLNQ NA  S+PTVE      G  QP+VV S PVV
Sbjct: 60  PVMVDAKTVLPKA----------EVHLNQANASVSNPTVE------GPAQPVVVVSVPVV 119

Query: 118 QATGEACDKSRDLNCIIEEGMSKVSLVTGSGSLVLDGGSTRNIELECQEDDGESDVESEG 177
           QA+ EA DKSRDLN IIEEGMSKVSLVTGS       GST NI+LEC++D+ ESDVESEG
Sbjct: 120 QASIEASDKSRDLNGIIEEGMSKVSLVTGS-------GSTGNIDLECRKDESESDVESEG 179

Query: 178 TSSATTSSSSSYGRGRNDEKDDEEENSSSSSSGDSSSDDEEEENEFTVNAEGHGEIADLE 237
           TSSATTSSSSS+GRGRNDEKD+EEENSSSSSS DSS DDEEEEN+FT+ AEGHGEI +LE
Sbjct: 180 TSSATTSSSSSHGRGRNDEKDEEEENSSSSSSDDSSCDDEEEENKFTMKAEGHGEIGELE 239

Query: 238 EGEIRDVDNEDEEATADHMVAWDGDCEDPDIEDDEEAGVEGGPISSKNELKVLPPVPRVY 297
           EGEIRDV++EDEEA+ D MVAWDGD  DPDI+DDEE GVEGGPISSKNELKVLPPVP+VY
Sbjct: 240 EGEIRDVEDEDEEASTDQMVAWDGDGGDPDIDDDEEVGVEGGPISSKNELKVLPPVPQVY 299

Query: 298 ATLQPHHRMLPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGLVDEIFGPVK 357
           ATLQPHH++LPVGVVLSIIG+QVIVEGVEKHNPLNEGSILWITE RSPLGLVDEIFGPVK
Sbjct: 300 ATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVK 359

Query: 358 NPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNSKDLYKKGYDASGVNDEEVSDDDE 417
           NPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLN+KDLYKKGYDASGVNDEEV DD+E
Sbjct: 360 NPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEE 419

Query: 418 FSDDEKELEFKKMQRLAKRTMNDSQKTGNRNNARKKKNSAQAKKFGQRTSQNAKIPDESR 477
           FSDDEKELEFKKMQRLAKR+MN++QK GN NN RKKKNS+QA+KF QRT QN KIPDE R
Sbjct: 420 FSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPR 479

Query: 478 KYGQPTPQQ----------------AKMDMVRPFSNQNQHTGPPLAPFVYQGGGPNASAA 537
            YGQPTPQQ                AKMDM++P SN NQH GPP APF Y GG PN SAA
Sbjct: 480 NYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHNQHNGPPFAPF-YHGGCPNPSAA 539

Query: 538 EQCFMNGTGVLPSFPPTYNPCFTPALNGIRPTEMPFQLQQQQIPFFPNALPMNGMPWLLQ 597
            QCF+NG GV+P FPPTYNPCFTPA+NGIRPTEMPFQLQQQQ PFFPNALPMNGMPWLLQ
Sbjct: 540 GQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQ 599

Query: 598 N-PAQQVPQMPMLNTFAGAAYPQGLVGTSPSLPNPLTSVGAQGIHSAGLQFGQNQN-LQP 657
           N P QQVPQMPM+NTF G AYPQGL+GTSP LPNPLTSVGAQGIHS GLQFGQNQN LQP
Sbjct: 600 NHPTQQVPQMPMMNTFGGVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQP 659

Query: 658 --PLAIPGSMEVKQQFNPVNSHPPVAFPGNVAPQQFNPGSSSSQGRKSYGRGG-PHFRGR 698
             PLAIPGSME  QQFNP NSHP  AF GN AP QFNP SSSSQG KS+GRGG  HFRGR
Sbjct: 660 PSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRGR 696

[Close]

BLAST of Sgr023624 vs. NCBI nr
Match: XP_022947448.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1 [Cucurbita moschata])

HSP 1 Score: 828.2 bits (2138), Expect = 8.1e-236
Identity = 463/661 (70.05%), Postives = 516/661 (78.06%), Query Frame = 0


Query: 58  PGYADAETVVPEAPGKRLDSTVEEGHLNQQNAPASDPTVERPVPVVGEVQPIVVGSEPVV 117
           P  ADA++++PEA          E H+NQ         VE+ VP+VGE+Q       P  
Sbjct: 66  PVMADAQSILPEA----------ESHVNQ--------PVEKSVPIVGEIQ-------PTA 125

Query: 118 QATGEACDKSRDLNCIIEEGMSKVSLVTGSGSLVLDGGSTRNIELECQEDDGESDVESEG 177
           QA GEAC KS DLNCIIEEGMSKV       SLV+DGGST NIE + +EDD ESDVESEG
Sbjct: 126 QAEGEACGKSTDLNCIIEEGMSKV-------SLVIDGGSTGNIESDSREDDDESDVESEG 185

Query: 178 TSSATTSSSSSYGRGRNDEKDDEEENSSSSSSGDSSSDDEEEENEFTVNAEGHGEIADLE 237
           TSSA+TSS SS   G +D++ DEEE+SSSSSSGDSS DD+ E  E +V A+ H EI +LE
Sbjct: 186 TSSASTSSDSSSSSGSSDDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELE 245

Query: 238 EGEIRDVDNEDEEATADHMVAWDGDCEDPDIEDDEEAGVEGGPISSKNELKVLPPVPRVY 297
           EGEI D DNED+EA+AD MVAWDGD E+ D ED  EAG EGGPISSKNELKVLPPVP+V+
Sbjct: 246 EGEISDADNEDKEASADDMVAWDGDGEELDEED--EAGPEGGPISSKNELKVLPPVPQVH 305

Query: 298 ATLQPHHRMLPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGLVDEIFGPVK 357
           ATLQPHH+M+PVGVVLSIIG+QVIVEGVEKHNPLNEGSILW+T  RSPLGLVDEIFGPVK
Sbjct: 306 ATLQPHHQMVPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLGLVDEIFGPVK 365

Query: 358 NPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNSKDLYKKGYDASGVNDEEVSDDDE 417
           NPYYSVRYNSESEVPTGI  GTHVSFVLEFADYVLN+KDLYKKGYDASG NDEEVS D+E
Sbjct: 366 NPYYSVRYNSESEVPTGISSGTHVSFVLEFADYVLNNKDLYKKGYDASGANDEEVS-DNE 425

Query: 418 FSDDEKELEFKKMQRLAKRTMNDSQKTG-NRNNARKKKNSAQAKKFGQRTSQNAKIPDES 477
           FSDDEKELEFKKMQ+LAKR MND+Q+   NRNNARKKKN+A+A+KFGQRT +  +  D+S
Sbjct: 426 FSDDEKELEFKKMQKLAKRGMNDNQQINENRNNARKKKNNAKARKFGQRTFETPQEHDKS 485

Query: 478 RKYG----------------QPTPQQAKMDMVRPFSNQNQHTGPPLAPFVYQGGGPNASA 537
           R YG                QP PQQ KMDM + FSNQNQHTGPPLAPFVY GG PN SA
Sbjct: 486 RNYGQSMPQQATVPEGSKFDQPAPQQVKMDMAQSFSNQNQHTGPPLAPFVYHGGYPNPSA 545

Query: 538 AEQCFMNGTGVLPSFPPTYNPCFTPALNGIRPTEMPFQL--QQQQIPFFPNALPMNGMPW 597
           +EQ F+NG GV+PSFPP YNPCF PA+NGIRP EMPFQ   QQQQ P FPN LPMNGMPW
Sbjct: 546 SEQRFINGPGVMPSFPPAYNPCFPPAMNGIRPAEMPFQFQQQQQQNPLFPNGLPMNGMPW 605

Query: 598 LLQNPAQQV--PQMPMLNTFAGAAYPQGLVGTSPSLPNPLTSVGAQGIHSAGLQFGQNQN 657
           LLQNP QQV  PQMPM+NTFAGA YP G VGTS +LPNPLT+VGAQGIHS G+QFGQNQN
Sbjct: 606 LLQNPVQQVPQPQMPMMNTFAGAPYPPGFVGTSSALPNPLTAVGAQGIHSGGVQFGQNQN 665

Query: 658 LQPPLAIPGSMEVKQQFNPVNSHPPVAFPGNVAPQQFNPGSSSSQGRKSYGRGGPHFRGR 698
           + PP          QQFN  N HPPV F GNVAP+QFN GSSS++GRKSYGRGGPHFRGR
Sbjct: 666 MHPP---------TQQFNRSNPHPPVPFQGNVAPEQFNQGSSSNRGRKSYGRGGPHFRGR 682

[Close]

BLAST of Sgr023624 vs. NCBI nr
Match: XP_023533326.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 826.2 bits (2133), Expect = 3.1e-235
Identity = 460/662 (69.49%), Postives = 517/662 (78.10%), Query Frame = 0


Query: 58  PGYADAETVVPEAPGKRLDSTVEEGHLNQQNAPASDPTVERPVPVVGEVQPIVVGSEPVV 117
           P  ADA+T++PEA          E H+NQ         VE+ VP+VGE+QPI        
Sbjct: 64  PVMADAQTILPEA----------ESHVNQ--------LVEKSVPIVGEIQPI-------A 123

Query: 118 QATGEACDKSRDLNCIIEEGMSKVSLVTGSGSLVLDGGSTRNIELECQEDDGESDVESEG 177
           QA GEAC KS DLNCIIEEGMSKV       SLV+DGGST NIE + +EDD +SDVESEG
Sbjct: 124 QAEGEACGKSTDLNCIIEEGMSKV-------SLVIDGGSTGNIESDSREDDDDSDVESEG 183

Query: 178 TSSATTSSSSSYGRGRNDEKDDEEENSSSSSSGDSSSDDEEEENEFTVNAEGHGEIADLE 237
           TSSA+TSS SS   G +D++ DEEE+SSSSSSGDSS DD+ E  E +V A+ H EI +LE
Sbjct: 184 TSSASTSSDSSSSSGSSDDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELE 243

Query: 238 EGEIRDVDNEDEEATADHMVAWDGDCEDPDIEDDEEAGVEGGPISSKNELKVLPPVPRVY 297
           EGEI D DNED+EA+AD MVAWDGD E  +++++EEAG EGGPISSKNELKVLPPVP+V+
Sbjct: 244 EGEISDADNEDKEASADDMVAWDGDGE--ELDEEEEAGPEGGPISSKNELKVLPPVPQVH 303

Query: 298 ATLQPHHRMLPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGLVDEIFGPVK 357
           ATLQPHH+M+PVGVVLSIIG+QVIVEGVEKHNPLNEGSILW+T  RSPLGLVDEIFGPVK
Sbjct: 304 ATLQPHHQMVPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLGLVDEIFGPVK 363

Query: 358 NPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNSKDLYKKGYDASGVNDEEVSDDDE 417
           NPYYSVRYNSESEVPTGI  GTHVSFVLEFADYVLN+KDLYKKGYDASG NDEEVS D+E
Sbjct: 364 NPYYSVRYNSESEVPTGISSGTHVSFVLEFADYVLNNKDLYKKGYDASGANDEEVS-DNE 423

Query: 418 FSDDEKELEFKKMQRLAKRTMNDSQKTG-NRNNARKKKNSAQAKKFGQRTSQNAKIPDES 477
           FSDDEKELEFKKMQ+LAKR MND+Q+   NRNNARKKKN+A+A+KFGQRT +  +  D+S
Sbjct: 424 FSDDEKELEFKKMQKLAKRGMNDNQQINENRNNARKKKNNAKARKFGQRTFETPQEHDKS 483

Query: 478 RKYG----------------QPTPQQAKMDMVRPFSNQNQHTGPPLAPFVYQGGGPNASA 537
           R YG                QP PQQ KMDM   FSNQNQHTGPPLAPFVY GG PN SA
Sbjct: 484 RNYGQAIPQQATVPEGSKFDQPAPQQVKMDMAHSFSNQNQHTGPPLAPFVYHGGYPNPSA 543

Query: 538 AEQCFMNGTGVLPSFPPTYNPCFTPALNGIRPTEMPFQL---QQQQIPFFPNALPMNGMP 597
           +EQ F+NG GV+PSFPP +NPCF PA+NGIRP EMPFQ    QQQQ P FPN LPM GMP
Sbjct: 544 SEQRFINGPGVMPSFPPAFNPCFPPAMNGIRPAEMPFQFQQQQQQQNPLFPNGLPMTGMP 603

Query: 598 WLLQNPAQQV--PQMPMLNTFAGAAYPQGLVGTSPSLPNPLTSVGAQGIHSAGLQFGQNQ 657
           WLLQNP QQV  PQMPM+NTFAGA YP G VGTS +LPNPLT+VGAQGIHS G+QFGQNQ
Sbjct: 604 WLLQNPVQQVPQPQMPMMNTFAGAPYPPGFVGTSSALPNPLTAVGAQGIHSGGVQFGQNQ 663

Query: 658 NLQPPLAIPGSMEVKQQFNPVNSHPPVAFPGNVAPQQFNPGSSSSQGRKSYGRGGPHFRG 698
           N+ PP          QQFN  N HPPV F GNVAP+QFN GSSS++GRKSYGRGGPHFRG
Sbjct: 664 NMHPP---------TQQFNRPNPHPPVPFQGNVAPEQFNQGSSSNRGRKSYGRGGPHFRG 681

[Close]

BLAST of Sgr023624 vs. NCBI nr
Match: KAG6604811.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 825.9 bits (2132), Expect = 4.0e-235
Identity = 462/663 (69.68%), Postives = 516/663 (77.83%), Query Frame = 0


Query: 58  PGYADAETVVPEAPGKRLDSTVEEGHLNQQNAPASDPTVERPVPVVGEVQPIVVGSEPVV 117
           P  ADA+ ++PEA          E H+NQ         VE+ VP+VGE+QPI        
Sbjct: 66  PVMADAQAILPEA----------ESHVNQ--------LVEKSVPIVGEIQPI-------A 125

Query: 118 QATGEACDKSRDLNCIIEEGMSKVSLVTGSGSLVLDGGSTRNIELECQEDDGESDVESEG 177
           QA GEAC KS DLNCIIEEGMSKV       SLV+DGGST NIE + +EDD ESDVESEG
Sbjct: 126 QAEGEACGKSTDLNCIIEEGMSKV-------SLVIDGGSTGNIESDSREDDDESDVESEG 185

Query: 178 TSSATTSSSSSYGRGRNDEKDDEEENSSSSSSGDSSSDDEEEENEFTVNAEGHGEIADLE 237
           TSSA+TSS SS   G +D++ DEEE+SSSSSSGDSS DD+ E  E +V A+ H EI +LE
Sbjct: 186 TSSASTSSDSSSSSGSSDDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELE 245

Query: 238 EGEIRDVDNEDEEATADHMVAWDGDCEDPDIEDDEEAGVEGGPISSKNELKVLPPVPRVY 297
           EGEI D DNED+EA+AD MVAWDGD E+ D ED  EAG EGGPISSKNELKVLPPVP+V+
Sbjct: 246 EGEISDADNEDKEASADDMVAWDGDGEELDEED--EAGPEGGPISSKNELKVLPPVPQVH 305

Query: 298 ATLQPHHRMLPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGLVDEIFGPVK 357
           ATLQPHH+M+PVGVVLSIIG+QVIVEGVEKHNPLNEGSILW+T  RSPLGLVDEIFGPVK
Sbjct: 306 ATLQPHHQMVPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLGLVDEIFGPVK 365

Query: 358 NPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNSKDLYKKGYDASGVNDEEVSDDDE 417
           NPYYSVRYNSESEVPTGI  GTHVSFVLEFADYVLN+KDLYKKGYDASG NDEEVS D+E
Sbjct: 366 NPYYSVRYNSESEVPTGISSGTHVSFVLEFADYVLNNKDLYKKGYDASGANDEEVS-DNE 425

Query: 418 FSDDEKELEFKKMQRLAKRTMNDSQKTG-NRNNARKKKNSAQAKKFGQRTSQNAKIPDES 477
           FSDDEKELEFKKMQ+LAKR MND+Q+   NRNNARKKKN+A+A+KFGQRT +  +  D+S
Sbjct: 426 FSDDEKELEFKKMQKLAKRGMNDNQQINENRNNARKKKNNAKARKFGQRTFETPQEHDKS 485

Query: 478 RKYG----------------QPTPQQAKMDMVRPFSNQNQHTGPPLAPFVYQGGGPNASA 537
           R YG                QP PQQ KMDM + FSNQNQHTGPPLAPFVY GG PN SA
Sbjct: 486 RNYGQSMPQQATVPEGSKFDQPAPQQVKMDMAQSFSNQNQHTGPPLAPFVYHGGYPNPSA 545

Query: 538 AEQCFMNGTGVLPSFPPTYNPCFTPALNGIRPTEMPFQL----QQQQIPFFPNALPMNGM 597
           +EQ F+NG GV+PSFPP +NPCF PA+NGIRP EMPFQ     QQQQ P FPN LPMNGM
Sbjct: 546 SEQRFINGPGVMPSFPPAFNPCFPPAMNGIRPAEMPFQFQQQQQQQQNPLFPNGLPMNGM 605

Query: 598 PWLLQNPAQQV--PQMPMLNTFAGAAYPQGLVGTSPSLPNPLTSVGAQGIHSAGLQFGQN 657
           PWLLQNP QQV  PQMPM+NTFAGA YP G VGTS +LPNPLT+VG+QGIHS G+QFGQN
Sbjct: 606 PWLLQNPVQQVPQPQMPMMNTFAGAPYPPGFVGTSSALPNPLTAVGSQGIHSGGVQFGQN 665

Query: 658 QNLQPPLAIPGSMEVKQQFNPVNSHPPVAFPGNVAPQQFNPGSSSSQGRKSYGRGGPHFR 698
           QN+ PP          QQFN  N HPPV F GNVAP+QFN GSSS++GRKSYGRGGPHFR
Sbjct: 666 QNMHPP---------TQQFNRSNRHPPVPFQGNVAPEQFNQGSSSNRGRKSYGRGGPHFR 684

[Close]

BLAST of Sgr023624 vs. ExPASy Swiss-Prot
Match: P53919 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NAF1 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-13
Identity = 131/450 (29.11%), Postives = 193/450 (42.89%), Query Frame = 0


Query: 190 GRGRNDEKDDEEENSSSSSSGDSSSDDEEEENEFTVNAEGHGEIADLEEGEIRDVDNEDE 249
           G G N+ K DE    +  S+G  S   E E +  + +    G     ++   +DV+ EDE
Sbjct: 32  GDGGNERKTDEPVADAERSTGLGSGSSESESDSGSDSDSDSGSSGSEDDSADQDVEGEDE 91

Query: 250 EATADHMVAWDGDCEDPDIEDDEEAGVEGGPISSKNEL--KVLPPVPRVYATLQPHHRML 309
              A             + ED++E     GPI SKNE+  + +P +P  Y  +     + 
Sbjct: 92  GGDA------------IENEDEDEDPSPSGPILSKNEILEETVPELPEDY-EISEKTIIT 151

Query: 310 PVGVVLSIIGNQVIVEGV--EKHNPLNEGSILWITETRSPLGLVDEIFGPVKNPYYSVRY 369
           P+GV+ S   N +I+      +   L EGSI  + E R+ +G++ E+FGP++NP+Y ++ 
Sbjct: 152 PIGVLKSAFENNIIIHATMSGEKRVLKEGSIFCL-EDRTLIGMLTEVFGPLQNPFYRIKL 211

Query: 370 -----NSESEVPTGICGGTHVSFVLEFADYVLNSKDLYKKGYDASGVNDEEVSDDD-EFS 429
                N   E+   +  G     V   A ++   +    KG DAS   DEE+ +++ EFS
Sbjct: 212 PDSKKNLFDELKVRL--GEKAFIVTPDAHWIDTFELKRNKGTDASNGYDEELPEEEQEFS 271

Query: 430 DDEKELEFKKMQRLAK-RTMNDSQKTGNRNNARKKKNSAQAK------------------ 489
           DDEKE  FKKM++  + R   D++K  N ++  K K + Q K                  
Sbjct: 272 DDEKEALFKKMKKQQRQRKKRDNRKLANDSDNVKVKRARQPKANSLPKLVPPLGMSSNAP 331

Query: 490 -KFGQRTSQNAK--IPDES-----RKYGQPTP-----QQAKMDMVRPFSNQ-NQHTGPPL 549
            + G + S+NA+  I  ES     R    P P     QQ       PF  Q N    PP 
Sbjct: 332 MQHGYK-SRNARENIKRESSATSNRNGSSPVPITQHHQQQFSANNYPFPQQPNGMPYPPY 391

Query: 550 APFV----YQGGGPNASAAEQCFMNGTGVLPSFPPTYNPCFTPALNGIRPTEMPFQLQQQ 590
           +PF     +Q   P    A     + T    S PP YN       N   PT+  F    Q
Sbjct: 392 SPFPQPTNFQYPPPPFGQATPAQFSNTVPYGSLPPAYN-------NMSPPTQQSFMPMTQ 451

[Close]

BLAST of Sgr023624 vs. ExPASy Swiss-Prot
Match: Q96HR8 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Homo sapiens OX=9606 GN=NAF1 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-07
Identity = 80/277 (28.88%), Postives = 127/277 (45.85%), Query Frame = 0


Query: 163 ECQEDDGESDVESEGTSSATTSSSSSYGRGRNDEKDDEEENSSSSSSGDSSSDDEEEENE 222
           +C    G ++      S  T+ S S      +D + D + +SSSSSS  SSS        
Sbjct: 94  DCVTSPGAAEPARAPDSLETSDSDSD-----SDSETDSDSSSSSSSSSSSSS-------- 153

Query: 223 FTVNAEGHGEIADLEEGEIRDVDNEDEEATADHMVAWDGDCEDPDIEDDEEAGVEGGPIS 282
                                  +      +   V  DGD +D  IE +     +  P+ 
Sbjct: 154 -----------------------SSSSSCISLPPVLSDGD-DDLQIEKEN----KNFPLK 213

Query: 283 SKNELKV--LPPVPRVYATLQPHHRMLPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWIT 342
           +K+EL +  LP V  +   L     + P+G+V SII   VI+E +    P+NE ++++ +
Sbjct: 214 TKDELLLNELPSVEELTIILPEDIELKPLGMVSSIIEQLVIIESMTNLPPVNEETVIFKS 273

Query: 343 ETRSPLGLVDEIFGPVKNPYYSVRYNSESEVPT-GICGGTHVSF---VLEFADYVLNSKD 402
           + R   G + EIFGPV +P+Y +R+NS   + + GI     + F   + +F  Y+   K 
Sbjct: 274 D-RQAAGKIFEIFGPVAHPFYVLRFNSSDHIESKGIKIKETMYFAPSMKDFTQYIFTEKL 328

Query: 403 LYKKGYDASGVNDEEVSDDD-EFSDDEKELEFKKMQR 433
              KG DAS  ND+E   +  +FSDDEKE E K+ ++
Sbjct: 334 KQDKGSDASWKNDQEPPPEALDFSDDEKEKEAKQRKK 328

[Close]

BLAST of Sgr023624 vs. ExPASy Swiss-Prot
Match: Q52KK4 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Rattus norvegicus OX=10116 GN=Naf1 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-07
Identity = 81/298 (27.18%), Postives = 138/298 (46.31%), Query Frame = 0


Query: 207 SSSGDSSSDDEEEENEFTVNAEGHGEIADLEEGEIRDVDNEDEEATADHMVAWDGDCEDP 266
           S S DS SD E + +  + ++      +    G +  V ++ EE                
Sbjct: 82  SDSSDSDSDSETDSDSSSSSSSSSSSSSSC--GSLPPVLSDGEE---------------- 141

Query: 267 DIEDDEEAGVEGGPISSKNELKV--LPPVPRVYATLQPHHRMLPVGVVLSIIGNQVIVEG 326
           D++ ++E   +  P+ +K+EL +  LP V  +  TL     + P+G V SII   VI+E 
Sbjct: 142 DVQVEKEN--KNFPLKTKDELLLNELPSVEELTVTLPEDIALKPLGKVSSIIEQLVIIES 201

Query: 327 VEKHNPLNEGSILWITETRSPLGLVDEIFGPVKNPYYSVRYNSESEVPT-GICGGTHVSF 386
           +    P+NE ++++ ++ R   G + EIFGPV +P+Y +R+NS   + + GI     + F
Sbjct: 202 MTNIPPVNEDTVIFKSD-RQAAGKIFEIFGPVAHPFYVLRFNSSEHIESKGIKIKDTMYF 261

Query: 387 ---VLEFADYVLNSKDLYKKGYDASGVNDEEVSDDD-EFSDDEKELEFKKM-------QR 446
              + +F  Y+   K    +G DAS  ND+E   +  +FSDDEKE E K+        ++
Sbjct: 262 APSMKDFTQYIFTEKLKQDRGSDASWKNDQEPPPEALDFSDDEKEKEAKQRKKSQIQGRK 321

Query: 447 LAKRTMNDSQKTGNRNNARKKKNSAQAKKFGQRTSQNAKIPDESR----KYGQPTPQQ 487
             K  +N+S +     +     NS+     G    +  +     R     +G+P PQQ
Sbjct: 322 KLKSELNESGEDFGEVHQNWNANSSSEHSKGYHNREFTRGFPRGRYSRGSHGRPPPQQ 358

[Close]

BLAST of Sgr023624 vs. ExPASy Swiss-Prot
Match: O14360 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=naf1 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-07
Identity = 101/384 (26.30%), Postives = 157/384 (40.89%), Query Frame = 0


Query: 181 ATTSSSSSYGRGRNDEKDDEEENSS-SSSSGDSSSDDEEEENEFTVNAEGHGEIADLEEG 240
           AT SS  S  +  ++  +    NSS   SS D SSD   +    T  +E      D+EE 
Sbjct: 155 ATNSSEKSNVKIADEIAEVTHSNSSIGKSSADLSSDSSSDSESNTSFSE-----TDVEE- 214

Query: 241 EIRDVDNEDEEATADHMVAWDGDCEDPDIEDDEEAGVEGGPISSKNEL-KVLPPVPRVYA 300
                                   E  + + D E+     P  + NEL + +   P +  
Sbjct: 215 ------------------------EKAEEKSDAESMAPSTPPKTVNELPEQIYEKPEI-- 274

Query: 301 TLQPHHRMLPVGVVLSIIGNQVIVEG-VEKHNPLNEGSILWITETRSPLGLVDEIFGPVK 360
            LQP+  + P+G ++ ++  +V+V+  ++    + +   +   E RS +G + E FGPV 
Sbjct: 275 VLQPNSLIEPLGKIIQVLKREVVVKSDIDDEKIVFDEKTVLCFEDRSIIGYIHETFGPVS 334

Query: 361 NPYYSVRYNSESEVPT-GICGGTHVSFVLEFADYVLNSKDLYKKGYDASGVNDEEVS-DD 420
           +PYY VR+++E E      C G  V +V   A+ +      Y KG DAS V DEE++  +
Sbjct: 335 SPYYIVRFSTEEECSAINACMGRPVFYVPTMANKIDPEPLKYIKGSDASNVYDEEINPSE 394

Query: 421 DEFSDDEKELEFKKMQRLAKRTMNDSQKTGNRNNARKKKNSAQAKKFGQRTSQNAKIPDE 480
            EFSDDE E+  K++                     KKK   +AK      S N  +P  
Sbjct: 395 QEFSDDEAEVAAKQL---------------------KKKRKRKAKSM---VSGNQALP-- 454

Query: 481 SRKYGQPTPQQAKMDMVR--PFSNQNQHTGPPLAPFVYQ----------GGGPNASAAEQ 540
               G+   Q    + VR  PF   NQ + PP   F  +              N S    
Sbjct: 455 ----GEANFQSLNQNNVRNYPFYQTNQGSNPPAKRFTQEPPSSSLYSLSESSINYSTQSP 475

Query: 541 CFMNGTGVLPSFPPTYNPCFTPAL 548
            + N     PSFPP ++P +  ++
Sbjct: 515 MYYNYNYPQPSFPP-FHPIYNDSI 475

[Close]

BLAST of Sgr023624 vs. ExPASy Swiss-Prot
Match: Q3UMQ8 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Mus musculus OX=10090 GN=Naf1 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 2.1e-05
Identity = 85/313 (27.16%), Postives = 143/313 (45.69%), Query Frame = 0


Query: 192 GRNDEKDDEEENSSSSSSGDSSSDDEEEENEFTVNAEGHGEIADLEEGEIRDVDNEDEEA 251
           GRN  +      +S SS  DS S+ + + +  + ++                  +     
Sbjct: 97  GRNAAEPPPVLQASDSSDSDSDSETDSDSSSSSSSS-----------------SSSSSSC 156

Query: 252 TADHMVAWDGDCEDPDIEDDEEAGVEGGPISSKNELKV--LPPVPRVYATLQPHHRMLPV 311
            +   V  DGD ED  +E +     +  P+ +K+EL +  LP V  +   L     + P+
Sbjct: 157 VSFPPVLSDGD-EDFQLEKEN----KNFPLKTKDELLLNELPSVEELTVILPEDIALKPL 216

Query: 312 GVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGLVDEIFGPVKNPYYSVRYNSES 371
           G V SII   VI+E V    P+NE ++++ ++ R   G + EIFGPV +P+Y +R+NS  
Sbjct: 217 GKVSSIIEQLVIIESVTNIPPVNEDTVIFKSD-RQAAGKIFEIFGPVAHPFYVLRFNSSD 276

Query: 372 EVPT-GICGGTHVSF---VLEFADYVLNSKDLYKKGYDASGVNDEEVSDDD-EFSDDEKE 431
            + + GI     + F   + +F  Y+   K    +G DAS  ND+E   +  +FSDDEKE
Sbjct: 277 HIESKGIKINDTMYFAPSMKDFTQYIFTEKLKQDRGSDASWKNDQEPPPEVLDFSDDEKE 336

Query: 432 LEFKKMQRL----AKRTMNDSQKTGN-----RNNARKKKNSAQAKKFGQRTSQN--AKIP 487
            E K+ ++      K+  ++  ++G        N     +S  +K +  R      A+  
Sbjct: 337 KEAKQRKKSQIQGRKKLKSELNESGEDFGEVHENWNAYSSSEHSKGYHHREFSRGFARGR 386

[Close]

BLAST of Sgr023624 vs. ExPASy TrEMBL
Match: A0A6J1D5T5 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Momordica charantia OX=3673 GN=LOC111017890 PE=3 SV=1)

HSP 1 Score: 968.8 bits (2503), Expect = 1.9e-278
Identity = 520/659 (78.91%), Postives = 561/659 (85.13%), Query Frame = 0


Query: 58  PGYADAETVVPEAPGKRLDSTVEEGHLNQQNAPASDPTVERPVPVVGEVQPIVVGSEPVV 117
           P   DA+TV+P+A          E HLNQ NA  S+PTVE      G  QP+V  S PVV
Sbjct: 60  PVMVDAKTVLPKA----------EVHLNQANASVSNPTVE------GPAQPVVAVSVPVV 119

Query: 118 QATGEACDKSRDLNCIIEEGMSKVSLVTGSGSLVLDGGSTRNIELECQEDDGESDVESEG 177
           QA+ EA DKSRDLN IIEEGMSKVSLVTGS       GST NI+LEC++D+ ESDVESEG
Sbjct: 120 QASIEASDKSRDLNGIIEEGMSKVSLVTGS-------GSTGNIDLECRKDESESDVESEG 179

Query: 178 TSSATTSSSSSYGRGRNDEKDDEEENSSSSSSGDSSSDDEEEENEFTVNAEGHGEIADLE 237
           TSSATTSSSSS+GRGRNDEKD+EEENSSSSSS DSS DDEEEEN+FT+ AEGHGEI +LE
Sbjct: 180 TSSATTSSSSSHGRGRNDEKDEEEENSSSSSSDDSSCDDEEEENKFTMKAEGHGEIGELE 239

Query: 238 EGEIRDVDNEDEEATADHMVAWDGDCEDPDIEDDEEAGVEGGPISSKNELKVLPPVPRVY 297
           EGEIRDV++EDEEA+ D MVAWDGD  DPDI+DDEE GVEGGPISSKNELKVLPPVP+VY
Sbjct: 240 EGEIRDVEDEDEEASTDQMVAWDGDGGDPDIDDDEEVGVEGGPISSKNELKVLPPVPQVY 299

Query: 298 ATLQPHHRMLPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGLVDEIFGPVK 357
           ATLQP H+++PVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGL+DEIFGPVK
Sbjct: 300 ATLQPQHQIIPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGLIDEIFGPVK 359

Query: 358 NPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNSKDLYKKGYDASGVNDEEVSDDDE 417
            PYYSVRYNSESEVPTGICGGT VSFVLEFADY+LN+KDLYKKGYDASGVNDEEVSDDDE
Sbjct: 360 YPYYSVRYNSESEVPTGICGGTRVSFVLEFADYILNNKDLYKKGYDASGVNDEEVSDDDE 419

Query: 418 FSDDEKELEFKKMQRLAKRTMNDSQKTGNRNNARKKKNSAQAKKFGQRTSQNAKIPDESR 477
           FSDDEKELEFKKMQRLAKR+ N++QK GN NN RKKKNS QA+KFGQRT QNAKIP+ESR
Sbjct: 420 FSDDEKELEFKKMQRLAKRSTNNNQKNGNGNNTRKKKNSGQARKFGQRTYQNAKIPNESR 479

Query: 478 KYGQP----------------TPQQAKMDMVRPFSNQNQHTGPPLAPFVYQGGGPNASAA 537
            YG+P                TPQQAKMDMV+P SNQNQH GPP APFVY GG PN SAA
Sbjct: 480 NYGEPTPQQAMMTEGSKFVQHTPQQAKMDMVQPSSNQNQHNGPPYAPFVYHGGCPNPSAA 539

Query: 538 EQCFMNGTGVLPSFPPTYNPCFTPALNGIRPTEMPFQLQQQQIPFFPNALPMNGMPWLLQ 597
           EQCF+NG+GV+PSFPPTY+PCFTPA+NGIRPTEMPF LQQQQ PFFPNALPMNGMPWLLQ
Sbjct: 540 EQCFINGSGVIPSFPPTYSPCFTPAMNGIRPTEMPFHLQQQQNPFFPNALPMNGMPWLLQ 599

Query: 598 NPAQQVPQMPMLNTFAGAAYPQGLVGTSPSLPNPLTSVGAQGIHSAGLQFGQNQNLQ--P 657
           NPAQQVPQMPM+NTF GAAYPQGL+GTSPSLPNPLTSVG QGIHS GLQFGQNQNLQ  P
Sbjct: 600 NPAQQVPQMPMMNTFGGAAYPQGLIGTSPSLPNPLTSVGTQGIHSGGLQFGQNQNLQPPP 659

Query: 658 PLAIPGSMEVKQQFNPVNSHPPVAFPGNVAPQQFNPGSSSSQGRKSYGR-GGPHFRGRR 698
           PLAIPGSME  Q FNP NSHP  AFPGNVAP QFNP SSSSQGRKS+GR GG HFRGRR
Sbjct: 660 PLAIPGSMEATQLFNPANSHPLGAFPGNVAPPQFNPDSSSSQGRKSHGRGGGSHFRGRR 695

[Close]

BLAST of Sgr023624 vs. ExPASy TrEMBL
Match: A0A6J1D9A9 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Momordica charantia OX=3673 GN=LOC111018557 PE=3 SV=1)

HSP 1 Score: 944.9 bits (2441), Expect = 2.9e-271
Identity = 516/661 (78.06%), Postives = 554/661 (83.81%), Query Frame = 0


Query: 58  PGYADAETVVPEAPGKRLDSTVEEGHLNQQNAPASDPTVERPVPVVGEVQPIVVGSEPVV 117
           P   DA+TV+P+A          E HLNQ NA  S+PTVE      G  QP+VV S PVV
Sbjct: 60  PVMVDAKTVLPKA----------EVHLNQANASVSNPTVE------GPAQPVVVVSVPVV 119

Query: 118 QATGEACDKSRDLNCIIEEGMSKVSLVTGSGSLVLDGGSTRNIELECQEDDGESDVESEG 177
           QA+ EA DKSRDLN IIEEGMSKVSLVTGS       GST NI+LEC++D+ ESDVESEG
Sbjct: 120 QASIEASDKSRDLNGIIEEGMSKVSLVTGS-------GSTGNIDLECRKDESESDVESEG 179

Query: 178 TSSATTSSSSSYGRGRNDEKDDEEENSSSSSSGDSSSDDEEEENEFTVNAEGHGEIADLE 237
           TSSATTSSSSS+GRGRNDEKD+EEENSSSSSS DSS DDEEEEN+FT+ AEGHGEI +LE
Sbjct: 180 TSSATTSSSSSHGRGRNDEKDEEEENSSSSSSDDSSCDDEEEENKFTMKAEGHGEIGELE 239

Query: 238 EGEIRDVDNEDEEATADHMVAWDGDCEDPDIEDDEEAGVEGGPISSKNELKVLPPVPRVY 297
           EGEIRDV++EDEEA+ D MVAWDGD  DPDI+DDEE GVEGGPISSKNELKVLPPVP+VY
Sbjct: 240 EGEIRDVEDEDEEASTDQMVAWDGDGGDPDIDDDEEVGVEGGPISSKNELKVLPPVPQVY 299

Query: 298 ATLQPHHRMLPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGLVDEIFGPVK 357
           ATLQPHH++LPVGVVLSIIG+QVIVEGVEKHNPLNEGSILWITE RSPLGLVDEIFGPVK
Sbjct: 300 ATLQPHHQILPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWITELRSPLGLVDEIFGPVK 359

Query: 358 NPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNSKDLYKKGYDASGVNDEEVSDDDE 417
           NPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLN+KDLYKKGYDASGVNDEEV DD+E
Sbjct: 360 NPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVLDDEE 419

Query: 418 FSDDEKELEFKKMQRLAKRTMNDSQKTGNRNNARKKKNSAQAKKFGQRTSQNAKIPDESR 477
           FSDDEKELEFKKMQRLAKR+MN++QK GN NN RKKKNS+QA+KF QRT QN KIPDE R
Sbjct: 420 FSDDEKELEFKKMQRLAKRSMNNNQKNGNGNNTRKKKNSSQARKFDQRTYQNEKIPDEPR 479

Query: 478 KYGQPTPQQ----------------AKMDMVRPFSNQNQHTGPPLAPFVYQGGGPNASAA 537
            YGQPTPQQ                AKMDM++P SN NQH GPP APF Y GG PN SAA
Sbjct: 480 NYGQPTPQQAMMPEGSKFDQHTTQEAKMDMIQPSSNHNQHNGPPFAPF-YHGGCPNPSAA 539

Query: 538 EQCFMNGTGVLPSFPPTYNPCFTPALNGIRPTEMPFQLQQQQIPFFPNALPMNGMPWLLQ 597
            QCF+NG GV+P FPPTYNPCFTPA+NGIRPTEMPFQLQQQQ PFFPNALPMNGMPWLLQ
Sbjct: 540 GQCFINGGGVIPPFPPTYNPCFTPAINGIRPTEMPFQLQQQQNPFFPNALPMNGMPWLLQ 599

Query: 598 N-PAQQVPQMPMLNTFAGAAYPQGLVGTSPSLPNPLTSVGAQGIHSAGLQFGQNQN-LQP 657
           N P QQVPQMPM+NTF G AYPQGL+GTSP LPNPLTSVGAQGIHS GLQFGQNQN LQP
Sbjct: 600 NHPTQQVPQMPMMNTFGGVAYPQGLIGTSPGLPNPLTSVGAQGIHSGGLQFGQNQNLLQP 659

Query: 658 --PLAIPGSMEVKQQFNPVNSHPPVAFPGNVAPQQFNPGSSSSQGRKSYGRGG-PHFRGR 698
             PLAIPGSME  QQFNP NSHP  AF GN AP QFNP SSSSQG KS+GRGG  HFRGR
Sbjct: 660 PSPLAIPGSMEATQQFNPANSHPSGAFSGNGAPPQFNPDSSSSQGGKSFGRGGDSHFRGR 696

[Close]

BLAST of Sgr023624 vs. ExPASy TrEMBL
Match: A0A6J1G6M0 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucurbita moschata OX=3662 GN=LOC111451307 PE=3 SV=1)

HSP 1 Score: 828.2 bits (2138), Expect = 3.9e-236
Identity = 463/661 (70.05%), Postives = 516/661 (78.06%), Query Frame = 0


Query: 58  PGYADAETVVPEAPGKRLDSTVEEGHLNQQNAPASDPTVERPVPVVGEVQPIVVGSEPVV 117
           P  ADA++++PEA          E H+NQ         VE+ VP+VGE+Q       P  
Sbjct: 66  PVMADAQSILPEA----------ESHVNQ--------PVEKSVPIVGEIQ-------PTA 125

Query: 118 QATGEACDKSRDLNCIIEEGMSKVSLVTGSGSLVLDGGSTRNIELECQEDDGESDVESEG 177
           QA GEAC KS DLNCIIEEGMSKV       SLV+DGGST NIE + +EDD ESDVESEG
Sbjct: 126 QAEGEACGKSTDLNCIIEEGMSKV-------SLVIDGGSTGNIESDSREDDDESDVESEG 185

Query: 178 TSSATTSSSSSYGRGRNDEKDDEEENSSSSSSGDSSSDDEEEENEFTVNAEGHGEIADLE 237
           TSSA+TSS SS   G +D++ DEEE+SSSSSSGDSS DD+ E  E +V A+ H EI +LE
Sbjct: 186 TSSASTSSDSSSSSGSSDDEKDEEESSSSSSSGDSSCDDDVETEENSVKADVHTEIGELE 245

Query: 238 EGEIRDVDNEDEEATADHMVAWDGDCEDPDIEDDEEAGVEGGPISSKNELKVLPPVPRVY 297
           EGEI D DNED+EA+AD MVAWDGD E+ D ED  EAG EGGPISSKNELKVLPPVP+V+
Sbjct: 246 EGEISDADNEDKEASADDMVAWDGDGEELDEED--EAGPEGGPISSKNELKVLPPVPQVH 305

Query: 298 ATLQPHHRMLPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGLVDEIFGPVK 357
           ATLQPHH+M+PVGVVLSIIG+QVIVEGVEKHNPLNEGSILW+T  RSPLGLVDEIFGPVK
Sbjct: 306 ATLQPHHQMVPVGVVLSIIGSQVIVEGVEKHNPLNEGSILWLTVARSPLGLVDEIFGPVK 365

Query: 358 NPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNSKDLYKKGYDASGVNDEEVSDDDE 417
           NPYYSVRYNSESEVPTGI  GTHVSFVLEFADYVLN+KDLYKKGYDASG NDEEVS D+E
Sbjct: 366 NPYYSVRYNSESEVPTGISSGTHVSFVLEFADYVLNNKDLYKKGYDASGANDEEVS-DNE 425

Query: 418 FSDDEKELEFKKMQRLAKRTMNDSQKTG-NRNNARKKKNSAQAKKFGQRTSQNAKIPDES 477
           FSDDEKELEFKKMQ+LAKR MND+Q+   NRNNARKKKN+A+A+KFGQRT +  +  D+S
Sbjct: 426 FSDDEKELEFKKMQKLAKRGMNDNQQINENRNNARKKKNNAKARKFGQRTFETPQEHDKS 485

Query: 478 RKYG----------------QPTPQQAKMDMVRPFSNQNQHTGPPLAPFVYQGGGPNASA 537
           R YG                QP PQQ KMDM + FSNQNQHTGPPLAPFVY GG PN SA
Sbjct: 486 RNYGQSMPQQATVPEGSKFDQPAPQQVKMDMAQSFSNQNQHTGPPLAPFVYHGGYPNPSA 545

Query: 538 AEQCFMNGTGVLPSFPPTYNPCFTPALNGIRPTEMPFQL--QQQQIPFFPNALPMNGMPW 597
           +EQ F+NG GV+PSFPP YNPCF PA+NGIRP EMPFQ   QQQQ P FPN LPMNGMPW
Sbjct: 546 SEQRFINGPGVMPSFPPAYNPCFPPAMNGIRPAEMPFQFQQQQQQNPLFPNGLPMNGMPW 605

Query: 598 LLQNPAQQV--PQMPMLNTFAGAAYPQGLVGTSPSLPNPLTSVGAQGIHSAGLQFGQNQN 657
           LLQNP QQV  PQMPM+NTFAGA YP G VGTS +LPNPLT+VGAQGIHS G+QFGQNQN
Sbjct: 606 LLQNPVQQVPQPQMPMMNTFAGAPYPPGFVGTSSALPNPLTAVGAQGIHSGGVQFGQNQN 665

Query: 658 LQPPLAIPGSMEVKQQFNPVNSHPPVAFPGNVAPQQFNPGSSSSQGRKSYGRGGPHFRGR 698
           + PP          QQFN  N HPPV F GNVAP+QFN GSSS++GRKSYGRGGPHFRGR
Sbjct: 666 MHPP---------TQQFNRSNPHPPVPFQGNVAPEQFNQGSSSNRGRKSYGRGGPHFRGR 682

[Close]

BLAST of Sgr023624 vs. ExPASy TrEMBL
Match: A0A5D3CIV9 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00340 PE=3 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 9.6e-235
Identity = 464/673 (68.95%), Postives = 517/673 (76.82%), Query Frame = 0


Query: 52  FGGINIPGYADAETVVPEAPGKRLDSTVEEGHLNQQNAPASDPTVERPVPVVGEVQPIVV 111
           F  +  P   D + ++PE           + HL+Q        +VE+ VPV+  VQ   V
Sbjct: 56  FDELTSPNMVDTQKLLPEG----------DAHLSQ--------SVEKSVPVIDGVQSNFV 115

Query: 112 GSEPV---VQATGEACDKSRDLNCIIEEGMSKVSLVTGSGSLVLDGGSTRNIELECQEDD 171
            SE     +QA+GEAC+ S DLN IIEEGMSKV       SLVLDGG T  +ELE + DD
Sbjct: 116 RSEDFKIEMQASGEACNNSTDLNSIIEEGMSKV-------SLVLDGGCTSKVELESEADD 175

Query: 172 GESDVESEGTSSATTSSSSSYGRGRNDEKDDEEENSSSSSSGDSSSDDEEEENEFTVNAE 231
           GE+DVESEGTSS +TSSSSS G   ++E D+EEENSSSS    SSSD ++EE E+ V AE
Sbjct: 176 GENDVESEGTSSISTSSSSSSGGSSDNEVDEEEENSSSS----SSSDYDDEEEEYIVEAE 235

Query: 232 GHGEIADLEEGEIRDVDNEDEEATADHMVAWDGDCEDPDIED------DEEAGVEGGPIS 291
           G  EI +LEEGEIRD D EDEEA+AD MVAWD D ED D +D      +EEA  EGGPI+
Sbjct: 236 GKREIGELEEGEIRDADGEDEEASADDMVAWDNDGEDLDGDDEDLDGEEEEARAEGGPIT 295

Query: 292 SKNELKVLPPVPRVYATLQPHHRMLPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITET 351
           SKNELKVLPPVP+V+ATLQPHH+MLPVGVVLS++GNQVIVEGVEKHNPL+EGSILWITE 
Sbjct: 296 SKNELKVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEA 355

Query: 352 RSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNSKDLYKKGY 411
           RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLN+KDLYKKGY
Sbjct: 356 RSPLGLVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGY 415

Query: 412 DASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRTMNDSQK-TGNRNNARKKKNSAQAKK 471
           DASGVNDEEVSDD EFSDDEKELEFK+MQRLAKR MND+Q+  GN+NN RKKKN+A+A+K
Sbjct: 416 DASGVNDEEVSDDGEFSDDEKELEFKEMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARK 475

Query: 472 FGQRTSQNAKIPDESRK-YGQ----------------PTPQQAKMDMVRPFSNQNQHTGP 531
           F Q T +NA +PDES+K YGQ                PTPQQAKMDMV+P  NQNQ TGP
Sbjct: 476 FVQHTFENANVPDESKKFYGQRTPEQATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGP 535

Query: 532 PLAPFVYQGGGPNASAAEQCFMNGTGVLPSFPPTYNPCFTPALNGIRPTEMPFQLQQQQI 591
           PLAPFVYQGG P+ S AEQCFMN TGV+ SFPPTYNP FTPA+NGIRP EMPFQ  QQQ 
Sbjct: 536 PLAPFVYQGGCPDLSVAEQCFMNETGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFPQQQN 595

Query: 592 PFFPNALPMNGMPWLLQNPAQQVPQMPMLNTFAGAAYPQGLVGTSPSLPNPLTSVGAQGI 651
           PFFPN LPMNGMPWLLQNPAQQ+PQMPMLNTF GAAYPQG VG+S +LPN LT+VGAQGI
Sbjct: 596 PFFPNGLPMNGMPWLLQNPAQQMPQMPMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGI 655

Query: 652 HSAGLQFGQNQNLQPPLAIPGSMEVKQQFNPVNSHPPVAFPGNVAPQQFNPGSSSSQGRK 698
           HS GLQFGQNQN   P A        QQFNP NSHPP  F GN APQQFN  SSS QGRK
Sbjct: 656 HSGGLQFGQNQNNLQPAA--------QQFNPPNSHPPGTFSGNRAPQQFNQNSSSKQGRK 691

[Close]

BLAST of Sgr023624 vs. ExPASy TrEMBL
Match: A0A1S4E2D7 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN=LOC103498379 PE=3 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 9.6e-235
Identity = 464/673 (68.95%), Postives = 517/673 (76.82%), Query Frame = 0


Query: 52  FGGINIPGYADAETVVPEAPGKRLDSTVEEGHLNQQNAPASDPTVERPVPVVGEVQPIVV 111
           F  +  P   D + ++PE           + HL+Q        +VE+ VPV+  VQ   V
Sbjct: 56  FDELTSPNMVDTQKLLPEG----------DAHLSQ--------SVEKSVPVIDGVQSNFV 115

Query: 112 GSEPV---VQATGEACDKSRDLNCIIEEGMSKVSLVTGSGSLVLDGGSTRNIELECQEDD 171
            SE     +QA+GEAC+ S DLN IIEEGMSKV       SLVLDGG T  +ELE + DD
Sbjct: 116 RSEDFKIEMQASGEACNNSTDLNSIIEEGMSKV-------SLVLDGGCTSKVELESEADD 175

Query: 172 GESDVESEGTSSATTSSSSSYGRGRNDEKDDEEENSSSSSSGDSSSDDEEEENEFTVNAE 231
           GE+DVESEGTSS +TSSSSS G   ++E D+EEENSSSS    SSSD ++EE E+ V AE
Sbjct: 176 GENDVESEGTSSISTSSSSSSGGSSDNEVDEEEENSSSS----SSSDYDDEEEEYIVEAE 235

Query: 232 GHGEIADLEEGEIRDVDNEDEEATADHMVAWDGDCEDPDIED------DEEAGVEGGPIS 291
           G  EI +LEEGEIRD D EDEEA+AD MVAWD D ED D +D      +EEA  EGGPI+
Sbjct: 236 GKREIGELEEGEIRDADGEDEEASADDMVAWDNDGEDLDGDDEDLDGEEEEARAEGGPIT 295

Query: 292 SKNELKVLPPVPRVYATLQPHHRMLPVGVVLSIIGNQVIVEGVEKHNPLNEGSILWITET 351
           SKNELKVLPPVP+V+ATLQPHH+MLPVGVVLS++GNQVIVEGVEKHNPL+EGSILWITE 
Sbjct: 296 SKNELKVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEA 355

Query: 352 RSPLGLVDEIFGPVKNPYYSVRYNSESEVPTGICGGTHVSFVLEFADYVLNSKDLYKKGY 411
           RSPLGLVDEIFGPVKNPYYSVRYNSESEVP GI GGTHVSFVLEFADYVLN+KDLYKKGY
Sbjct: 356 RSPLGLVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGY 415

Query: 412 DASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRTMNDSQK-TGNRNNARKKKNSAQAKK 471
           DASGVNDEEVSDD EFSDDEKELEFK+MQRLAKR MND+Q+  GN+NN RKKKN+A+A+K
Sbjct: 416 DASGVNDEEVSDDGEFSDDEKELEFKEMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARK 475

Query: 472 FGQRTSQNAKIPDESRK-YGQ----------------PTPQQAKMDMVRPFSNQNQHTGP 531
           F Q T +NA +PDES+K YGQ                PTPQQAKMDMV+P  NQNQ TGP
Sbjct: 476 FVQHTFENANVPDESKKFYGQRTPEQATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGP 535

Query: 532 PLAPFVYQGGGPNASAAEQCFMNGTGVLPSFPPTYNPCFTPALNGIRPTEMPFQLQQQQI 591
           PLAPFVYQGG P+ S AEQCFMN TGV+ SFPPTYNP FTPA+NGIRP EMPFQ  QQQ 
Sbjct: 536 PLAPFVYQGGCPDLSVAEQCFMNETGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFPQQQN 595

Query: 592 PFFPNALPMNGMPWLLQNPAQQVPQMPMLNTFAGAAYPQGLVGTSPSLPNPLTSVGAQGI 651
           PFFPN LPMNGMPWLLQNPAQQ+PQMPMLNTF GAAYPQG VG+S +LPN LT+VGAQGI
Sbjct: 596 PFFPNGLPMNGMPWLLQNPAQQMPQMPMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGI 655

Query: 652 HSAGLQFGQNQNLQPPLAIPGSMEVKQQFNPVNSHPPVAFPGNVAPQQFNPGSSSSQGRK 698
           HS GLQFGQNQN   P A        QQFNP NSHPP  F GN APQQFN  SSS QGRK
Sbjct: 656 HSGGLQFGQNQNNLQPAA--------QQFNPPNSHPPGTFSGNRAPQQFNQNSSSKQGRK 691

[Close]

BLAST of Sgr023624 vs. TAIR 10
Match: AT1G03530.1 (nuclear assembly factor 1 )

HSP 1 Score: 269.6 bits (688), Expect = 1.0e-71
Identity = 245/660 (37.12%), Postives = 323/660 (48.94%), Query Frame = 0


Query: 93  DPTVERPVPVV--------GEVQPIVVGSEPVVQAT---GEACDKSRD--LNCIIEEGMS 152
           +P V+   PVV        GE +P+VV    V   T    E+  K  D  L C IE G+ 
Sbjct: 164 EPAVKDSEPVVSENSRSMEGETEPVVVSDASVACPTMDLDESGLKKTDEGLACSIEVGLE 223

Query: 153 KVSLVTGSGSLVLDGGSTRNIELECQEDDGESDVESEGTSSATTSSSSSYGRGRNDEKDD 212
           KVSL              ++ E + + D  ES+ E+  +S++++ SSSS     ++++ D
Sbjct: 224 KVSLAVDD--------DEKSDEAKGEMDSAESESETSSSSASSSDSSSSEEEESDEDESD 283

Query: 213 EEENSSSSSSGD---SSSDD---EEEENEFTVNAEGHGEIADLEEGEIRDVDNEDEEATA 272
           +EEN              DD   E EE E     E +G+  D+E+ +  D D++D++   
Sbjct: 284 KEENKKEEKFEHMVVGKEDDLAGELEEGEIENLDEENGD-DDIEDEDDDDDDDDDDDDDV 343

Query: 273 DHMVAWDGDCEDPDIEDDEEAGVEGGPISSKNELKVLPPVPRVYATLQPHHRMLPVGVVL 332
           + MVAW  D      EDD+       PI SKNELK LPPVP V  TL+PHH  LPVGVVL
Sbjct: 344 NEMVAWSND------EDDDLGLQTKEPIRSKNELKELPPVPPVDVTLEPHHATLPVGVVL 403

Query: 333 SIIGNQVIVEGVEKHNPLNEGSILWITETRSPLGLVDEIFGPVKNPYYSVRYNSESEVPT 392
           S++  QVIVEG+EKH+PL EGSILWITE R+PLGLVDEIFGPVK PYY VR+NSESEVP 
Sbjct: 404 SVMSAQVIVEGMEKHSPLTEGSILWITEKRTPLGLVDEIFGPVKCPYYIVRFNSESEVPE 463

Query: 393 GICGGTHVSFVLEFADYVLNSKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRL 452
           G+C GT VSFV +FA ++LN K+L KKGYDASG NDEE+ D+ EFSDDEKE E+++MQ+L
Sbjct: 464 GVCQGTPVSFVADFAQHILNIKELQKKGYDASGDNDEEIPDELEFSDDEKEAEYRRMQKL 523

Query: 453 AKRTMNDSQKTGNRNNARKKKNSAQAKKFGQRTSQNAKIPDESR--------KYGQPTPQ 512
            KR M   QKTGN  N +KKKN    +     + +  K    S         + G P PQ
Sbjct: 524 EKRGMMSDQKTGNTRN-KKKKNRDPGRPTSSYSGEWTKNQGSSSLSSNRSDPQMGGPRPQ 583

Query: 513 Q----AKMDMVRPFSN-QNQHTGPPLAPFVYQGGGPNASAAEQCFMNGTGVLPSFPPTYN 572
                      RP SN QN +  PP+         PN    +  FM       +      
Sbjct: 584 MDGFPPNNAAWRPQSNQQNPYQLPPI---------PNQMGMQIPFM-------AMQNQNQ 643

Query: 573 PCFTPALNGIRPTEMPFQLQQQQIPFFPNALPMNGMPWLLQNPAQQ-------VPQMPML 632
             F P  NG    +MP       + FFP          + QN   Q       + Q P+ 
Sbjct: 644 MMFQPQFNG---GQMPMPGGPGGLNFFPGQASAPWPAMVGQNCFNQQFGMGRGIQQQPLP 703

Query: 633 NTFAGAAYPQGLVGTSP--SLPNPLTSVGAQGIHSAGLQFGQNQNLQP----------PL 692
           N  +   + QGL    P   +  P + +  Q       Q  Q   + P          P 
Sbjct: 704 NELSFNMFSQGLQMHPPQSQMHRPQSQMNPQFQMPPQFQPHQQSPMNPQYQMMHRPQSPA 763

Query: 693 AIPGSMEVKQQFNPVNSHPP-----VAFPGNVAPQQFNPGSSSSQGRKSYGRGGPHFRGR 697
                M+ +    P+ S  P     +  P     Q F+ G SS +GR  +GRG    RGR
Sbjct: 764 NPQFQMQAQSDVRPLQSQIPQSPSDLQSPMEPQSQGFSSGQSSERGRGFHGRGRGRGRGR 788

The following BLAST results are available for this feature:

BLAST of Sgr023624 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149469.1	3.8e-278	78.91	H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia]...	[more]
XP_022150383.1	5.9e-271	78.06	H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Momordica charantia]	[more]
XP_022947448.1	8.1e-236	70.05	H/ACA ribonucleoprotein complex non-core subunit NAF1 [Cucurbita moschata]	[more]
XP_023533326.1	3.1e-235	69.49	H/ACA ribonucleoprotein complex non-core subunit NAF1 [Cucurbita pepo subsp. pep...	[more]
KAG6604811.1	4.0e-235	69.68	H/ACA ribonucleoprotein complex non-core subunit NAF1, partial [Cucurbita argyro...	[more]

BLAST of Sgr023624 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P53919	1.2e-13	29.11	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Saccharomyces cerevisia...	[more]
Q96HR8	1.0e-07	28.88	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Homo sapiens OX=9606 GN...	[more]
Q52KK4	2.3e-07	27.18	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Rattus norvegicus OX=10...	[more]
O14360	2.3e-07	26.30	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Schizosaccharomyces pom...	[more]
Q3UMQ8	2.1e-05	27.16	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Mus musculus OX=10090 G...	[more]

BLAST of Sgr023624 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5T5	1.9e-278	78.91	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Momordica charantia OX=...	[more]
A0A6J1D9A9	2.9e-271	78.06	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Momordica charantia OX=...	[more]
A0A6J1G6M0	3.9e-236	70.05	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucurbita moschata OX=3...	[more]
A0A5D3CIV9	9.6e-235	68.95	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuw...	[more]
A0A1S4E2D7	9.6e-235	68.95	H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Sgr023624 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03530.1	1.0e-71	37.12	nuclear assembly factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038664	H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain	GENE3D	2.40.10.230	Probable tRNA pseudouridine synthase domain	coord: 278..384 e-value: 1.9E-26 score: 94.3
IPR007504	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	PFAM	PF04410	Gar1	coord: 290..433 e-value: 1.1E-33 score: 116.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 432..485
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 460..483
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 670..685
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 654..698
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..242
IPR040309	H/ACA ribonucleoprotein complex non-core subunit Naf1	PANTHER	PTHR31633	H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1	coord: 91..695
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 306..369

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr023624.1	Sgr023624.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000493	box H/ACA snoRNP assembly
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding