Sgr023547 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr023547
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	RING-type domain-containing protein
Location	tig00000892: 4345163 .. 4345483 (-)
RNA-Seq Expression	Sgr023547
Synteny	Sgr023547

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATATGGAGCGCCATTAACAGGATTCAGTGCTAATGCTGCGGCGGAGACTCTGCTTCCACCGTACAATTCTTTAGCGATTGATTCGTTTCCTAAAGCGGCGGCGGCGTCGACGGCCGCTGTTATGAAGTCCGACAGCGGTATTACCTATAACCTTCCTCTACCGAGAAAGCGCGCTAGGGATCATCCACCATCAACCGCTTCCTCTCGGCCTACCCTTCGCCTGCTCATTCCCAGAAAAACTGCGGCTGTTTCTATTTTCTTGGCGAAGATATCTCCATCCAAATTCAACAGCAACAATTCGATCTCGACCGATTGA

mRNA sequence

ATGGGATATGGAGCGCCATTAACAGGATTCAGTGCTAATGCTGCGGCGGAGACTCTGCTTCCACCGTACAATTCTTTAGCGATTGATTCGTTTCCTAAAGCGGCGGCGGCGTCGACGGCCGCTGTTATGAAGTCCGACAGCGGTATTACCTATAACCTTCCTCTACCGAGAAAGCGCGCTAGGGATCATCCACCATCAACCGCTTCCTCTCGGCCTACCCTTCGCCTGCTCATTCCCAGAAAAACTGCGGCTGTTTCTATTTTCTTGGCGAAGATATCTCCATCCAAATTCAACAGCAACAATTCGATCTCGACCGATTGA

Coding sequence (CDS)

ATGGGATATGGAGCGCCATTAACAGGATTCAGTGCTAATGCTGCGGCGGAGACTCTGCTTCCACCGTACAATTCTTTAGCGATTGATTCGTTTCCTAAAGCGGCGGCGGCGTCGACGGCCGCTGTTATGAAGTCCGACAGCGGTATTACCTATAACCTTCCTCTACCGAGAAAGCGCGCTAGGGATCATCCACCATCAACCGCTTCCTCTCGGCCTACCCTTCGCCTGCTCATTCCCAGAAAAACTGCGGCTGTTTCTATTTTCTTGGCGAAGATATCTCCATCCAAATTCAACAGCAACAATTCGATCTCGACCGATTGA

Protein sequence

MGYGAPLTGFSANAAAETLLPPYNSLAIDSFPKAAAASTAAVMKSDSGITYNLPLPRKRARDHPPSTASSRPTLRLLIPRKTAAVSIFLAKISPSKFNSNNSISTD

Homology

[Close]

BLAST of Sgr023547 vs. NCBI nr
Match: XP_023532101.1 (probable BOI-related E3 ubiquitin-protein ligase 3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 110.2 bits (274), Expect = 1.1e-20
Identity = 57/65 (87.69%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 1  MGYGAPLTGFSANAAA--ETLLPPYNSLAIDSFPKAAAASTAAVMKSDSGITYNLPLPRK 60
          MGYGAPLTGFSANAAA   TLLPPYN +AIDSFPKAAAASTAA +KSDSGITYNLP+PRK
Sbjct: 1  MGYGAPLTGFSANAAAAETTLLPPYNYIAIDSFPKAAAASTAAGLKSDSGITYNLPIPRK 60

Query: 61 RARDH 64
          RARDH
Sbjct: 61 RARDH 65

[Close]

BLAST of Sgr023547 vs. NCBI nr
Match: XP_023532102.1 (probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 110.2 bits (274), Expect = 1.1e-20
Identity = 57/65 (87.69%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 1  MGYGAPLTGFSANAAA--ETLLPPYNSLAIDSFPKAAAASTAAVMKSDSGITYNLPLPRK 60
          MGYGAPLTGFSANAAA   TLLPPYN +AIDSFPKAAAASTAA +KSDSGITYNLP+PRK
Sbjct: 1  MGYGAPLTGFSANAAAAETTLLPPYNYIAIDSFPKAAAASTAAGLKSDSGITYNLPIPRK 60

Query: 61 RARDH 64
          RARDH
Sbjct: 61 RARDH 65

[Close]

BLAST of Sgr023547 vs. NCBI nr
Match: XP_022970878.1 (probable BOI-related E3 ubiquitin-protein ligase 3 [Cucurbita maxima])

HSP 1 Score: 108.6 bits (270), Expect = 3.3e-20
Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 1  MGYGAPLTGFSANAAA--ETLLPPYNSLAIDSFPKAAAASTAAVMKSDSGITYNLPLPRK 60
          MGYGAP TGFSANAAA   TLLPPYN +AIDSFPKAAAASTAA +KSDSGITYNLP+PRK
Sbjct: 1  MGYGAPFTGFSANAAAAETTLLPPYNYIAIDSFPKAAAASTAAGLKSDSGITYNLPIPRK 60

Query: 61 RARDH 64
          RARDH
Sbjct: 61 RARDH 65

[Close]

BLAST of Sgr023547 vs. NCBI nr
Match: XP_022149629.1 (probable BOI-related E3 ubiquitin-protein ligase 3 [Momordica charantia])

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-19
Identity = 54/64 (84.38%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 1  MGYGAPLTGFSANAAAETLLPPYNSLAIDSFPKAA-AASTAAVMKSDSGITYNLPLPRKR 60
          MGYGAPLTGFS NAA+E L PPYNS+AIDSFPKAA A  TAAVMKSDSGIT NLP+PRKR
Sbjct: 1  MGYGAPLTGFSGNAASEALFPPYNSVAIDSFPKAAVAVDTAAVMKSDSGITCNLPIPRKR 60

Query: 61 ARDH 64
          ARDH
Sbjct: 61 ARDH 64

[Close]

BLAST of Sgr023547 vs. NCBI nr
Match: KAG6604725.1 (putative BOI-related E3 ubiquitin-protein ligase 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-18
Identity = 57/71 (80.28%), Postives = 60/71 (84.51%), Query Frame = 0


Query: 1  MGYGAPLTGFSANAAA--ETLLPPYNSLAIDSFPKAAA------ASTAAVMKSDSGITYN 60
          MGYGAPLTGFSANAAA   TLLPPYN +AIDSFPKAAA      ASTAA +KSDSGITYN
Sbjct: 1  MGYGAPLTGFSANAAAAETTLLPPYNYIAIDSFPKAAAAMTTATASTAAGLKSDSGITYN 60

Query: 61 LPLPRKRARDH 64
          LP+PRKRARDH
Sbjct: 61 LPIPRKRARDH 71

[Close]

BLAST of Sgr023547 vs. ExPASy TrEMBL
Match: A0A6J1I570 (probable BOI-related E3 ubiquitin-protein ligase 3 OS=Cucurbita maxima OX=3661 GN=LOC111469724 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.6e-20
Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 1  MGYGAPLTGFSANAAA--ETLLPPYNSLAIDSFPKAAAASTAAVMKSDSGITYNLPLPRK 60
          MGYGAP TGFSANAAA   TLLPPYN +AIDSFPKAAAASTAA +KSDSGITYNLP+PRK
Sbjct: 1  MGYGAPFTGFSANAAAAETTLLPPYNYIAIDSFPKAAAASTAAGLKSDSGITYNLPIPRK 60

Query: 61 RARDH 64
          RARDH
Sbjct: 61 RARDH 65

[Close]

BLAST of Sgr023547 vs. ExPASy TrEMBL
Match: A0A6J1D7L3 (probable BOI-related E3 ubiquitin-protein ligase 3 OS=Momordica charantia OX=3673 GN=LOC111018014 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.0e-19
Identity = 54/64 (84.38%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 1  MGYGAPLTGFSANAAAETLLPPYNSLAIDSFPKAA-AASTAAVMKSDSGITYNLPLPRKR 60
          MGYGAPLTGFS NAA+E L PPYNS+AIDSFPKAA A  TAAVMKSDSGIT NLP+PRKR
Sbjct: 1  MGYGAPLTGFSGNAASEALFPPYNSVAIDSFPKAAVAVDTAAVMKSDSGITCNLPIPRKR 60

Query: 61 ARDH 64
          ARDH
Sbjct: 61 ARDH 64

[Close]

BLAST of Sgr023547 vs. ExPASy TrEMBL
Match: A0A6J1JF86 (probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483871 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.7e-18
Identity = 54/72 (75.00%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 1  MGYGAPLTGFSANAAA--ETLLPPYNSLAIDSFPKA-------AAASTAAVMKSDSGITY 60
          MGYGAPLTGFSAN AA   TLLPPYNS+AIDSFPKA       A+AST  VMKSDSGI+Y
Sbjct: 1  MGYGAPLTGFSANTAAAETTLLPPYNSVAIDSFPKALGAMPASASASTGVVMKSDSGISY 60

Query: 61 NLPLPRKRARDH 64
          NLP+PRKR RDH
Sbjct: 61 NLPIPRKRGRDH 72

[Close]

BLAST of Sgr023547 vs. ExPASy TrEMBL
Match: A0A6J1JCV5 (probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483871 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.7e-18
Identity = 54/72 (75.00%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 1  MGYGAPLTGFSANAAA--ETLLPPYNSLAIDSFPKA-------AAASTAAVMKSDSGITY 60
          MGYGAPLTGFSAN AA   TLLPPYNS+AIDSFPKA       A+AST  VMKSDSGI+Y
Sbjct: 1  MGYGAPLTGFSANTAAAETTLLPPYNSVAIDSFPKALGAMPASASASTGVVMKSDSGISY 60

Query: 61 NLPLPRKRARDH 64
          NLP+PRKR RDH
Sbjct: 61 NLPIPRKRGRDH 72

[Close]

BLAST of Sgr023547 vs. ExPASy TrEMBL
Match: A0A6J1G785 (probable BOI-related E3 ubiquitin-protein ligase 3 OS=Cucurbita moschata OX=3662 GN=LOC111451502 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.7e-18
Identity = 56/71 (78.87%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 1  MGYGAPLTGFSANAAA--ETLLPPYNSLAIDSFPKAAA------ASTAAVMKSDSGITYN 60
          MGYGAPLTGFSANAAA   TLLPPYN +AIDSFPKAAA      ASTAA +KSDSGITYN
Sbjct: 1  MGYGAPLTGFSANAAAAETTLLPPYNYIAIDSFPKAAAAMTTATASTAAGLKSDSGITYN 60

Query: 61 LPLPRKRARDH 64
          L +PRKRARDH
Sbjct: 61 LRIPRKRARDH 71

The following BLAST results are available for this feature:

BLAST of Sgr023547 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532101.1	1.1e-20	87.69	probable BOI-related E3 ubiquitin-protein ligase 3 isoform X1 [Cucurbita pepo su...	[more]
XP_023532102.1	1.1e-20	87.69	probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 [Cucurbita pepo su...	[more]
XP_022970878.1	3.3e-20	86.15	probable BOI-related E3 ubiquitin-protein ligase 3 [Cucurbita maxima]	[more]
XP_022149629.1	2.2e-19	84.38	probable BOI-related E3 ubiquitin-protein ligase 3 [Momordica charantia]	[more]
KAG6604725.1	1.1e-18	80.28	putative BOI-related E3 ubiquitin-protein ligase 3, partial [Cucurbita argyrospe...	[more]

BLAST of Sgr023547 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr023547 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I570	1.6e-20	86.15	probable BOI-related E3 ubiquitin-protein ligase 3 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1D7L3	1.0e-19	84.38	probable BOI-related E3 ubiquitin-protein ligase 3 OS=Momordica charantia OX=367...	[more]
A0A6J1JF86	5.7e-18	75.00	probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1JCV5	5.7e-18	75.00	probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 OS=Cucurbita maxim...	[more]
A0A6J1G785	5.7e-18	78.87	probable BOI-related E3 ubiquitin-protein ligase 3 OS=Cucurbita moschata OX=3662...	[more]

BLAST of Sgr023547 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr023547.1	Sgr023547.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043067	regulation of programmed cell death
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity