Sgr023300 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr023300
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionMyb-like transcription factor family protein
Locationtig00000892: 2001126 .. 2001398 (-)
RNA-Seq ExpressionSgr023300
SyntenySgr023300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCTGCTAATCGCCGCCGGAGGGGGACCAAGGAGTCATGTCCATTGGATAGCTACCCAAGACTCTGAGGAAGGACGTGAACTCCTGGACTTCTGCCAACGCGTTTTGTGCCCTAGTTTCTGCCATGGACGCCTCGAAATCCACGTAAAACATGTACTCGAAGTGCTTAGCCGTCCCGACGTTGGCGTCGTCGACGAGCCGGATGGGGCAGTTTCTGTGTGGCCTGGATTCGATCTTCGTCAAGCTAATGTTTCGGAAGGCGAAGGCTGA

mRNA sequence

ATGATTCTGCTAATCGCCGCCGGAGGGGGACCAAGGAGTCATGTCCATTGGATAGCTACCCAAGACTCTGAGGAAGGACGTGAACTCCTGGACTTCTGCCAACGCGTTTTGTGCCCTAGTTTCTGCCATGGACGCCTCGAAATCCACGTAAAACATGTACTCGAAGTGCTTAGCCGTCCCGACGTTGGCGTCGTCGACGAGCCGGATGGGGCAGTTTCTGTGTGGCCTGGATTCGATCTTCGTCAAGCTAATGTTTCGGAAGGCGAAGGCTGA

Coding sequence (CDS)

ATGATTCTGCTAATCGCCGCCGGAGGGGGACCAAGGAGTCATGTCCATTGGATAGCTACCCAAGACTCTGAGGAAGGACGTGAACTCCTGGACTTCTGCCAACGCGTTTTGTGCCCTAGTTTCTGCCATGGACGCCTCGAAATCCACGTAAAACATGTACTCGAAGTGCTTAGCCGTCCCGACGTTGGCGTCGTCGACGAGCCGGATGGGGCAGTTTCTGTGTGGCCTGGATTCGATCTTCGTCAAGCTAATGTTTCGGAAGGCGAAGGCTGA

Protein sequence

MILLIAAGGGPRSHVHWIATQDSEEGRELLDFCQRVLCPSFCHGRLEIHVKHVLEVLSRPDVGVVDEPDGAVSVWPGFDLRQANVSEGEG
Homology
BLAST of Sgr023300 vs. NCBI nr
Match: KCW87417.1 (hypothetical protein EUGRSUZ_B03894 [Eucalyptus grandis])

HSP 1 Score: 103.6 bits (257), Expect = 9.1e-19
Identity = 54/86 (62.79%), Postives = 59/86 (68.60%), Query Frame = 0

Query: 4  LIAAGGGPRSHVHWIATQDSEEGRELLDFCQRVLCPSFCHGRLEIHVKHVLEVLSRPDVG 63
          LI+ GG P  HVH IA QD EEGRELL F +RVL P     RLE+ V+HVLEVL R DVG
Sbjct: 12 LISPGGTPWRHVHGIAPQDPEEGRELLHFGERVLGPDLRERRLEVDVEHVLEVLRRADVG 71

Query: 64 VVDEPDGAVSVWPGFDLRQANVSEGE 90
          VVDEPDG V V P  DL Q +V E E
Sbjct: 72 VVDEPDGPVPVGPRLDLGQTDVPERE 97

BLAST of Sgr023300 vs. NCBI nr
Match: KAB8111751.1 (hypothetical protein EE612_049528, partial [Oryza sativa] >BAT09459.1 Os09g0566075, partial [Oryza sativa Japonica Group])

HSP 1 Score: 100.5 bits (249), Expect = 7.7e-18
Identity = 49/80 (61.25%), Postives = 56/80 (70.00%), Query Frame = 0

Query: 11 PRSHVHWIATQDSEEGRELLDFCQRVLCPSFCHGRLEIHVKHVLEVLSRPDVGVVDEPDG 70
          P  HVH +A +  EEG ELL   QRVL P   HGRLE+ V+HVLEVL R  VGVVDEPDG
Sbjct: 1  PGRHVHGVAAEHPEEGGELLYLRQRVLRPDLRHGRLEVDVEHVLEVLGRAHVGVVDEPDG 60

Query: 71 AVSVWPGFDLRQANVSEGEG 91
          AV+VW   DL +A+V E EG
Sbjct: 61 AVAVWAALDLGEADVPEREG 80

BLAST of Sgr023300 vs. NCBI nr
Match: KAF8039552.1 (hypothetical protein BT93_B1922 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 93.6 bits (231), Expect = 9.4e-16
Identity = 49/79 (62.03%), Postives = 53/79 (67.09%), Query Frame = 0

Query: 11  PRSHVHWIATQDSEEGRELLDFCQRVLCPSFCHGRLEIHVKHVLEVLSRPDVGVVDEPDG 70
           P   V   A QD EEGRELLD  + VL P     RLE+ V+HVLEVL R DVGVVDEPDG
Sbjct: 86  PMGLVRREAPQDPEEGRELLDLGESVLGPDLRERRLEVDVEHVLEVLRRADVGVVDEPDG 145

Query: 71  AVSVWPGFDLRQANVSEGE 90
            V V PG DL QA+V EGE
Sbjct: 146 PVPVGPGLDLGQADVPEGE 164

BLAST of Sgr023300 vs. NCBI nr
Match: RDX67084.1 (hypothetical protein CR513_54080, partial [Mucuna pruriens])

HSP 1 Score: 86.3 bits (212), Expect = 1.5e-13
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 0

Query: 3   LLIAAGGGPRSHVHWIATQDSEEGRELLDFCQRVLCPSFCHGRLEIHVKHVLEVLSRPDV 62
           LLI+ G  P  H+H +  QDS+E RELL   Q +L P+  HG L+I+V+ VLEVL   +V
Sbjct: 17  LLISPGRNPGCHIHRVTPQDSQERRELLHLRQCILGPNLSHGSLKINVEQVLEVLRGSNV 76

Query: 63  GVVDEPDGAVSVWPGFDLRQANVSEGE 90
            ++ +P+  V VWP  DLRQ NV + E
Sbjct: 77  RIIHKPNRTVPVWPRLDLRQTNVPKRE 103

BLAST of Sgr023300 vs. NCBI nr
Match: GER57100.1 (myb-like transcription factor family protein [Striga asiatica])

HSP 1 Score: 77.0 bits (188), Expect = 9.1e-11
Identity = 42/82 (51.22%), Postives = 51/82 (62.20%), Query Frame = 0

Query: 8  GGGPRSHVHWIATQDSEEGRELLDFCQRVLCPSFCHGRLEIHVKHVLEVLSRPDVGVVDE 67
          G GPR HVH +  +  +E  ELL   QRVL P      LEI++KHVLEVL RP V VV +
Sbjct: 15 GWGPRRHVHGVTAKYPKERGELLHLRQRVLRPRLRQRGLEINIKHVLEVLGRPHVCVVHK 74

Query: 68 PDGAVSVWPGFDLRQANVSEGE 90
          P   V+V P   L QA+V+EGE
Sbjct: 75 PYRPVAVGPRLYLGQADVAEGE 96

BLAST of Sgr023300 vs. ExPASy TrEMBL
Match: A0A059DA35 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03894 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.4e-19
Identity = 54/86 (62.79%), Postives = 59/86 (68.60%), Query Frame = 0

Query: 4  LIAAGGGPRSHVHWIATQDSEEGRELLDFCQRVLCPSFCHGRLEIHVKHVLEVLSRPDVG 63
          LI+ GG P  HVH IA QD EEGRELL F +RVL P     RLE+ V+HVLEVL R DVG
Sbjct: 12 LISPGGTPWRHVHGIAPQDPEEGRELLHFGERVLGPDLRERRLEVDVEHVLEVLRRADVG 71

Query: 64 VVDEPDGAVSVWPGFDLRQANVSEGE 90
          VVDEPDG V V P  DL Q +V E E
Sbjct: 72 VVDEPDGPVPVGPRLDLGQTDVPERE 97

BLAST of Sgr023300 vs. ExPASy TrEMBL
Match: A0A0P0XRB5 (Os09g0566075 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0566075 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.7e-18
Identity = 49/80 (61.25%), Postives = 56/80 (70.00%), Query Frame = 0

Query: 11 PRSHVHWIATQDSEEGRELLDFCQRVLCPSFCHGRLEIHVKHVLEVLSRPDVGVVDEPDG 70
          P  HVH +A +  EEG ELL   QRVL P   HGRLE+ V+HVLEVL R  VGVVDEPDG
Sbjct: 1  PGRHVHGVAAEHPEEGGELLYLRQRVLRPDLRHGRLEVDVEHVLEVLGRAHVGVVDEPDG 60

Query: 71 AVSVWPGFDLRQANVSEGEG 91
          AV+VW   DL +A+V E EG
Sbjct: 61 AVAVWAALDLGEADVPEREG 80

BLAST of Sgr023300 vs. ExPASy TrEMBL
Match: A0A0E0GFS8 (Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.6e-15
Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = 0

Query: 10 GPRSHVHWIATQDS-----EEGRELLDFCQRVLCPSFCHGRLEIHVKHVLEVLSRPDVGV 69
          GP+   + +   D+     EEG ELL   QRVL P   HGRLE+ V+HVLEVL R  VGV
Sbjct: 12 GPKKIANILVIPDATAEHPEEGGELLYLRQRVLRPDLRHGRLEVDVEHVLEVLGRAHVGV 71

Query: 70 VDEPDGAVSVWPGFDLRQANVSEGEG 91
          VDEPDGAV+VW   DL +A+V E EG
Sbjct: 72 VDEPDGAVAVWAALDLGEADVPEREG 97

BLAST of Sgr023300 vs. ExPASy TrEMBL
Match: A0A0E0GFS9 (Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.6e-15
Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = 0

Query: 10 GPRSHVHWIATQDS-----EEGRELLDFCQRVLCPSFCHGRLEIHVKHVLEVLSRPDVGV 69
          GP+   + +   D+     EEG ELL   QRVL P   HGRLE+ V+HVLEVL R  VGV
Sbjct: 12 GPKKIANILVIPDATAEHPEEGGELLYLRQRVLRPDLRHGRLEVDVEHVLEVLGRAHVGV 71

Query: 70 VDEPDGAVSVWPGFDLRQANVSEGEG 91
          VDEPDGAV+VW   DL +A+V E EG
Sbjct: 72 VDEPDGAVAVWAALDLGEADVPEREG 97

BLAST of Sgr023300 vs. ExPASy TrEMBL
Match: A0A371EM88 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_54080 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.3e-14
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 0

Query: 3   LLIAAGGGPRSHVHWIATQDSEEGRELLDFCQRVLCPSFCHGRLEIHVKHVLEVLSRPDV 62
           LLI+ G  P  H+H +  QDS+E RELL   Q +L P+  HG L+I+V+ VLEVL   +V
Sbjct: 17  LLISPGRNPGCHIHRVTPQDSQERRELLHLRQCILGPNLSHGSLKINVEQVLEVLRGSNV 76

Query: 63  GVVDEPDGAVSVWPGFDLRQANVSEGE 90
            ++ +P+  V VWP  DLRQ NV + E
Sbjct: 77  RIIHKPNRTVPVWPRLDLRQTNVPKRE 103

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KCW87417.19.1e-1962.79hypothetical protein EUGRSUZ_B03894 [Eucalyptus grandis][more]
KAB8111751.17.7e-1861.25hypothetical protein EE612_049528, partial [Oryza sativa] >BAT09459.1 Os09g05660... [more]
KAF8039552.19.4e-1662.03hypothetical protein BT93_B1922 [Corymbia citriodora subsp. variegata][more]
RDX67084.11.5e-1347.13hypothetical protein CR513_54080, partial [Mucuna pruriens][more]
GER57100.19.1e-1151.22myb-like transcription factor family protein [Striga asiatica][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A059DA354.4e-1962.79Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03894 PE=4 SV... [more]
A0A0P0XRB53.7e-1861.25Os09g0566075 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os09... [more]
A0A0E0GFS86.6e-1554.65Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1[more]
A0A0E0GFS96.6e-1554.65Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1[more]
A0A371EM887.3e-1447.13Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_54080 P... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr023300.1Sgr023300.1mRNA