Sgr023264 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr023264
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionNDR1/HIN1-like protein 10
Locationtig00000892: 1671901 .. 1672428 (+)
RNA-Seq ExpressionSgr023264
SyntenySgr023264
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGTAGCTTTCGTAACACCATATCTCTTCCTCCTCTCTACTGCTAGCTTTCCCAACATGTCCTCGAAACTGCACTCCTTCTCTGTAACGTCTCCGTCGAACTCATCCACCTCCATCTGCGACGTCGTTTTATCTGCAAAGAAGAACATTGCTTCATGCAAACACCTCTCCGTGGATATGTCCAGAGCCTCGGTACTGTACAGAGAAGAACGGATCTGGGATAGAGTTATGGAGCCGTTTTCTTTGACGGATAAGGAAGAGGCAATGATCCGTGTAAATATGTCTGCCGGAGCGCTGTTGTGGCAGCGGGTCGCAGGCGATTTCGCGGCTGAAATGAGGAGGAATGGGACGTTGGAGTTTGATTTTTATGTGGATGCTATAGGGAAGATGGATGGGGAAGAAAGAAACAAGATAACGATCGAAATCTTGTGTGGGAATTTGAAGGTTGGGTTTGATTCAGATTCTGAAGCAGCTCAACTGGTTGGTGGCCCTAAGAAATGCAAGACCAAGGTGGCATGGGGATAG

mRNA sequence

ATGCTTGTAGCTTTCGTAACACCATATCTCTTCCTCCTCTCTACTGCTAGCTTTCCCAACATGTCCTCGAAACTGCACTCCTTCTCTGTAACGTCTCCGTCGAACTCATCCACCTCCATCTGCGACGTCGTTTTATCTGCAAAGAAGAACATTGCTTCATGCAAACACCTCTCCGTGGATATGTCCAGAGCCTCGGTACTGTACAGAGAAGAACGGATCTGGGATAGAGTTATGGAGCCGTTTTCTTTGACGGATAAGGAAGAGGCAATGATCCGTGTAAATATGTCTGCCGGAGCGCTGTTGTGGCAGCGGGTCGCAGGCGATTTCGCGGCTGAAATGAGGAGGAATGGGACGTTGGAGTTTGATTTTTATGTGGATGCTATAGGGAAGATGGATGGGGAAGAAAGAAACAAGATAACGATCGAAATCTTGTGTGGGAATTTGAAGGTTGGGTTTGATTCAGATTCTGAAGCAGCTCAACTGGTTGGTGGCCCTAAGAAATGCAAGACCAAGGTGGCATGGGGATAG

Coding sequence (CDS)

ATGCTTGTAGCTTTCGTAACACCATATCTCTTCCTCCTCTCTACTGCTAGCTTTCCCAACATGTCCTCGAAACTGCACTCCTTCTCTGTAACGTCTCCGTCGAACTCATCCACCTCCATCTGCGACGTCGTTTTATCTGCAAAGAAGAACATTGCTTCATGCAAACACCTCTCCGTGGATATGTCCAGAGCCTCGGTACTGTACAGAGAAGAACGGATCTGGGATAGAGTTATGGAGCCGTTTTCTTTGACGGATAAGGAAGAGGCAATGATCCGTGTAAATATGTCTGCCGGAGCGCTGTTGTGGCAGCGGGTCGCAGGCGATTTCGCGGCTGAAATGAGGAGGAATGGGACGTTGGAGTTTGATTTTTATGTGGATGCTATAGGGAAGATGGATGGGGAAGAAAGAAACAAGATAACGATCGAAATCTTGTGTGGGAATTTGAAGGTTGGGTTTGATTCAGATTCTGAAGCAGCTCAACTGGTTGGTGGCCCTAAGAAATGCAAGACCAAGGTGGCATGGGGATAG

Protein sequence

MLVAFVTPYLFLLSTASFPNMSSKLHSFSVTSPSNSSTSICDVVLSAKKNIASCKHLSVDMSRASVLYREERIWDRVMEPFSLTDKEEAMIRVNMSAGALLWQRVAGDFAAEMRRNGTLEFDFYVDAIGKMDGEERNKITIEILCGNLKVGFDSDSEAAQLVGGPKKCKTKVAWG
Homology
[Close]
BLAST of Sgr023264 vs. NCBI nr
Match: XP_011088964.1 (NDR1/HIN1-like protein 10 [Sesamum indicum] >XP_011088965.1 NDR1/HIN1-like protein 10 [Sesamum indicum] >XP_020552221.1 NDR1/HIN1-like protein 10 [Sesamum indicum] >XP_020552222.1 NDR1/HIN1-like protein 10 [Sesamum indicum])

HSP 1 Score: 58.2 bits (139), Expect = 8.5e-05
Identity = 47/178 (26.40%), Postives = 83/178 (46.63%), Query Frame = 0 

Query: 1   MLVAFVTPYLFLLSTASFPNMSSKLHSFSV---TSPSNSSTSICDVVLSAKKNIASCKHL 60
           ++ A +T  ++L+     P    ++ SFSV   T  +NS  +    V    +N      L
Sbjct: 83  VVFAAITFIVWLVLRPQLPEF--RVDSFSVSNFTLGNNSLIAFTSEVRLTARNPNKKMTL 142

Query: 61  SVDMSRASVLYREERIWDRVMEPFSLTDKEEAMIRVNMSAGALLWQRVAGD-FAAEMRRN 120
           S D  +A V Y+   + D ++ PFS   K E  +  N +A      R A D   +E R N
Sbjct: 143 SYDHIQAVVFYKSWLLSDTIIPPFSQGTKNETSLTANFAAAGSFLDRPAVDGINSERRNN 202

Query: 121 GTLEFDFYVDAIGKMDGE--ERNKITIEILCGNLKVGFDSDSEAAQLVGGPKKCKTKV 173
           G + F+  V +  +   +     +  +++ CG+L VG  S+  +  L+GGP++C+  +
Sbjct: 203 GNVGFNLRVVSSVRFKAKAWRTRRRFLKVFCGDLAVGIQSNGMSGTLIGGPRQCRVGI 258

[Close]
BLAST of Sgr023264 vs. ExPASy TrEMBL
Match: A0A6I9TT31 (NDR1/HIN1-like protein 10 OS=Sesamum indicum OX=4182 GN=LOC105170066 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.1e-05
Identity = 47/178 (26.40%), Postives = 83/178 (46.63%), Query Frame = 0 

Query: 1   MLVAFVTPYLFLLSTASFPNMSSKLHSFSV---TSPSNSSTSICDVVLSAKKNIASCKHL 60
           ++ A +T  ++L+     P    ++ SFSV   T  +NS  +    V    +N      L
Sbjct: 83  VVFAAITFIVWLVLRPQLPEF--RVDSFSVSNFTLGNNSLIAFTSEVRLTARNPNKKMTL 142

Query: 61  SVDMSRASVLYREERIWDRVMEPFSLTDKEEAMIRVNMSAGALLWQRVAGD-FAAEMRRN 120
           S D  +A V Y+   + D ++ PFS   K E  +  N +A      R A D   +E R N
Sbjct: 143 SYDHIQAVVFYKSWLLSDTIIPPFSQGTKNETSLTANFAAAGSFLDRPAVDGINSERRNN 202

Query: 121 GTLEFDFYVDAIGKMDGE--ERNKITIEILCGNLKVGFDSDSEAAQLVGGPKKCKTKV 173
           G + F+  V +  +   +     +  +++ CG+L VG  S+  +  L+GGP++C+  +
Sbjct: 203 GNVGFNLRVVSSVRFKAKAWRTRRRFLKVFCGDLAVGIQSNGMSGTLIGGPRQCRVGI 258

The following BLAST results are available for this feature:
BLAST of Sgr023264 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011088964.18.5e-0526.40NDR1/HIN1-like protein 10 [Sesamum indicum] >XP_011088965.1 NDR1/HIN1-like prote... [more]
BLAST of Sgr023264 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr023264 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6I9TT314.1e-0526.40NDR1/HIN1-like protein 10 OS=Sesamum indicum OX=4182 GN=LOC105170066 PE=4 SV=1[more]
BLAST of Sgr023264 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr023264.1Sgr023264.1mRNA