Sgr022978 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr022978
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00000729: 1585422 .. 1586055 (-)
RNA-Seq Expression	Sgr022978
Synteny	Sgr022978

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACACGAACAGTTGAAGCTAAACACTTTCAACTTAAGAATCCCTACAGCGGGAATTATATACTAAAAGAGATATCAAAGTTCAAACGTTATACCAAACAACTTACCGGTAAGATCAGCTAGCAGTGCTCTACAAGGACCCTGTGAGAAGTTGTTAGCCACATCGAGAATCCAAAATCCAACCACAAAGAATCCAATTGCACGAGGCCTAACATCACCACCCCTGTCACCAATCAACCAACCCAGGTCCGCCGAGTGACCGATAATCAAAACGGCGACAACTATCGAAACTGCTCCGGCGACGATGAAGGGCCTCCGACGGCCGTATCGGCTGGTGCACCGATCGCTCATGTGGCCAACCAGCGGCTGGACAAAGAGGCCGGAAAGCGGTCCGCAGAGCCATATGAGACTAGACCAAGCATGAGGAATTCCGAGCTCTTGTATGTAGGGAGTCAAAAGAGATAGCTGCAAAGCCCAACCGAATTGAATTCCACATGCTACGGATGCCACGCGGAGTAACCGCCTCAACGGAACCCTAGCTCCTACTAGCGGTCGAGTTGCCGGACGATGCGCTCGACGAGACACGGTCCGCTGGTGCTCAGACTCCGGCATCACCATTTTCTCCCTGTAG

mRNA sequence

ATGTCAACACGAACAGTTGAAGCTAAACACTTTCAACTTAAGAATCCCTACAGCGGGAATTATATACTAAAAGAGATATCAAAGTTCAAACGTTATACCAAACAACTTACCGAAGTTGTTAGCCACATCGAGAATCCAAAATCCAACCACAAAGAATCCAATTGCACGAGGCCTAACATCACCACCCCTGTCACCAATCAACCAACCCAGGTCCGCCGAGTGACCGATAATCAAAACGGCGACAACTATCGAAACTGCTCCGGCGACGATGAAGGGCCTCCGACGGCCGTATCGGCTGGTGCACCGATCGCTCATGTGGCCAACCAGCGGCTGGACAAAGAGGCCGGAAAGCGGTCCGCAGAGCCATATGAGACTAGACCAAGCATGAGGAATTCCGAGCTCTTTAACCGCCTCAACGGAACCCTAGCTCCTACTAGCGGTCGAGTTGCCGGACGATGCGCTCGACGAGACACGGTCCGCTGGTGCTCAGACTCCGGCATCACCATTTTCTCCCTGTAG

Coding sequence (CDS)

ATGTCAACACGAACAGTTGAAGCTAAACACTTTCAACTTAAGAATCCCTACAGCGGGAATTATATACTAAAAGAGATATCAAAGTTCAAACGTTATACCAAACAACTTACCGAAGTTGTTAGCCACATCGAGAATCCAAAATCCAACCACAAAGAATCCAATTGCACGAGGCCTAACATCACCACCCCTGTCACCAATCAACCAACCCAGGTCCGCCGAGTGACCGATAATCAAAACGGCGACAACTATCGAAACTGCTCCGGCGACGATGAAGGGCCTCCGACGGCCGTATCGGCTGGTGCACCGATCGCTCATGTGGCCAACCAGCGGCTGGACAAAGAGGCCGGAAAGCGGTCCGCAGAGCCATATGAGACTAGACCAAGCATGAGGAATTCCGAGCTCTTTAACCGCCTCAACGGAACCCTAGCTCCTACTAGCGGTCGAGTTGCCGGACGATGCGCTCGACGAGACACGGTCCGCTGGTGCTCAGACTCCGGCATCACCATTTTCTCCCTGTAG

Protein sequence

MSTRTVEAKHFQLKNPYSGNYILKEISKFKRYTKQLTEVVSHIENPKSNHKESNCTRPNITTPVTNQPTQVRRVTDNQNGDNYRNCSGDDEGPPTAVSAGAPIAHVANQRLDKEAGKRSAEPYETRPSMRNSELFNRLNGTLAPTSGRVAGRCARRDTVRWCSDSGITIFSL

Homology

[Close]

BLAST of Sgr022978 vs. NCBI nr
Match: KAE8056148.1 (hypothetical protein FH972_012941 [Carpinus fangiana])

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-06
Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 0


Query: 42  HIENPKSNHKESNCTRPNITTPVTNQPTQVRRVTDNQNGDNYRNCSGDDEGPPTAVSAGA 101
           H E+P+  H+ S+   P   T V  +P  VRRV+DNQ+GD+ ++  G+ E PP A SA A
Sbjct: 23  HPESPE--HEFSHGPGPERAT-VVEEPPDVRRVSDNQDGDSNQHRPGEYERPPAAKSACA 82

Query: 102 PIAHVANQRLDKEAGKRSAEPYETRPSMRNSELFN 137
            IAHVA+Q L +E  ++ A+PY T P M + +L +
Sbjct: 83  AIAHVAHQGLHQEPRQQPAKPYHTGPGMCDPQLLH 114

[Close]

BLAST of Sgr022978 vs. NCBI nr
Match: POO00246.1 (hypothetical protein TorRG33x02_040240 [Trema orientale])

HSP 1 Score: 58.9 bits (141), Expect = 4.9e-05
Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 36  LTEVVSHIENPKSNHKESNCTRPNITT-PVTNQPTQVRRVTDNQNGDNYRNCSGDDEGPP 95
           +  VV  +E+P+ +H+  +  R  +    V  +  +VR   D ++GD     +G DE PP
Sbjct: 1   MEHVVGDVEDPEPDHEHGDRPRLRLAVEAVAERVAEVRGEADEEDGDGDEGGAGCDERPP 60

Query: 96  TAVSAGAPIAHVANQRLDKEAGKRSAEPYETRPSMRNSELFN 137
            A + GA +A VA++ LD+ AG  +AEP E  P +RN+E  N
Sbjct: 61  AAEAGGAAVAVVADEGLDQHAGDWAAEPDEGGPGVRNAEELN 102

[Close]

BLAST of Sgr022978 vs. ExPASy TrEMBL
Match: A0A5N6R8K1 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_012941 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 9.6e-07
Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 0


Query: 42  HIENPKSNHKESNCTRPNITTPVTNQPTQVRRVTDNQNGDNYRNCSGDDEGPPTAVSAGA 101
           H E+P+  H+ S+   P   T V  +P  VRRV+DNQ+GD+ ++  G+ E PP A SA A
Sbjct: 23  HPESPE--HEFSHGPGPERAT-VVEEPPDVRRVSDNQDGDSNQHRPGEYERPPAAKSACA 82

Query: 102 PIAHVANQRLDKEAGKRSAEPYETRPSMRNSELFN 137
            IAHVA+Q L +E  ++ A+PY T P M + +L +
Sbjct: 83  AIAHVAHQGLHQEPRQQPAKPYHTGPGMCDPQLLH 114

[Close]

BLAST of Sgr022978 vs. ExPASy TrEMBL
Match: A0A2P5FR07 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_040240 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.4e-05
Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 36  LTEVVSHIENPKSNHKESNCTRPNITT-PVTNQPTQVRRVTDNQNGDNYRNCSGDDEGPP 95
           +  VV  +E+P+ +H+  +  R  +    V  +  +VR   D ++GD     +G DE PP
Sbjct: 1   MEHVVGDVEDPEPDHEHGDRPRLRLAVEAVAERVAEVRGEADEEDGDGDEGGAGCDERPP 60

Query: 96  TAVSAGAPIAHVANQRLDKEAGKRSAEPYETRPSMRNSELFN 137
            A + GA +A VA++ LD+ AG  +AEP E  P +RN+E  N
Sbjct: 61  AAEAGGAAVAVVADEGLDQHAGDWAAEPDEGGPGVRNAEELN 102

The following BLAST results are available for this feature:

BLAST of Sgr022978 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8056148.1	2.0e-06	43.16	hypothetical protein FH972_012941 [Carpinus fangiana]	[more]
POO00246.1	4.9e-05	35.29	hypothetical protein TorRG33x02_040240 [Trema orientale]	[more]

BLAST of Sgr022978 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr022978 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5N6R8K1	9.6e-07	43.16	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_012941 PE=4 SV=1	[more]
A0A2P5FR07	2.4e-05	35.29	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_040240 PE=4 SV...	[more]

BLAST of Sgr022978 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr022978.1	Sgr022978.1	mRNA