Sgr022956 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr022956
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	exosome complex exonuclease RRP46 homolog
Location	tig00000729: 1326110 .. 1330704 (-)
RNA-Seq Expression	Sgr022956
Synteny	Sgr022956

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTAGACAGAGATGATGGTCGCACCCCCAACCAGTTGAGACCACTTGCTTGTTCTTGCAACATTCTCAATCGTGCTCATGGCTCCGCTAGTTGGTCCCAAGGTCCGTCCATCTTCCAACATCTTTTCTTGTTCTTGCTTCATTAGTGATTTGGTTAAATTTTGTATAGTCTTCTTTTTTACAAAGAGTAATTCATTTAATTCGGATTTTTTAGGCGATACAAAAGTCCTTGCTGCAGTATATGGACCTAAAGCAGGAACAAAAAAGAATGAAAATCCTGAGAAGGCTTCAATTGAGGTCATATGGAAACCCAAGACAGGGCAGATTGGTAAGCTTCTTTGTTTTCTTATATACTTCGTTTTCTCCATCTCAGTTTCGTATGATAAAGCTTTCATGCGTGAGTATACTAGGAGCGCAAATAATTCTATATGCCATGATGTGATTAAGAAGCAATATAGGGATAATCATAATATTGGCAGTTCAGTAAGTTTCTTACTTGTTAATGGCATTAAAATGTGGCTTTCTTTGTGCATAGTGTACTATTTTATACTTCAGCTGAATTTGAACTTTGAAGTAGGTGGTGATATTCTGTGAATCTCCTTAATGGATTTTTTAAAAATTCATGATGTTAGGAAAACTGGAAAGGGAGTGTGAGATGATACTAAAGAGGACATTACAGAGTATTTGCATTTTGACTATTAATCCCAACACCACAACATCTATTGTTGTTCAGGTGAGTCTAATTTTTTTCCCCTTTTCAGTGCAAAATGCTTCTGATATGCTACATGTTTTCCTCTTCTTTGTTCCTTCCTGTTATCAATGCTTGTCATGCATATACACCCTAAAGACTCTATATTACTTGTCTCATGCCGATTTTTAATGTTTATCTAATATATATCCAATAGGTATCTCTAAATGTTGTTGAAGGTAAGCAACCTCTGGATATAAACCAGGAATATAGATGCACCACCTTAAAATTTAAAATTTATGTTATAGTTATTCAGTTCTTATGGTTCTGAAAATTCTCTCTGTCTTGCTCTGTCTCATATAAAATAATGTTATTGCTCGTGATAGGGACTTAGCGAATTCCTTTCTACTCCTGACATGGATATTTACATATCTATGGCATGTTAGATGTTACATTATTTTATTTTATATTTGAAACATCAAAATAGTATATTTAAGAAATAATTAGCCGCAACATGCTATTAAGTTACTGAAACTCTATGTTGCTGGAAAGTGCAGAATGCAAATATTCTATAACTGCCAAGTAACACCTCAGTGCTAAATTGTACGTGGATGGCTATTTGTTTAACTTTTGTTCATTTCCTTGTCATGAAAAAGGTTTTGGACTGTCAGCTTTGAAATTCATTACATTAAAGGCATGTACATTAGTTATTTTGCAACTCATTTCTTATCTCAAATACATTGATGTTTCACCCCCATAATTGCAGGTTATTCATGATGATGGAGCTGTATCCCTTGTGATTTAATACCTTTTTTTAAATGACTAAAGATAATGTTAGGAAAAGATAAGTATATTTGGACACGTATTATTCATGTCATCATGATCCTATTCAAGTTGAAAGTTGAACTTGAGTCCAAGTCCTCGCACTTACTTTACATGTGTTCCAACCAACTGTGCTATATAAGAGCTGATTTACATTTATATGATATGGGGAACTACTGTCGGGTCAGGAAGAGGGGAAGGACTTGGGCTTACTTATCAAAATGAACAGTTCTTTTATTTTTCCTTGGGTCAAAGATCTAGATTTACTGTGGATTCCTACCAAGGAAGGTGGAAGACCTCCCTTAATATATTACATGCATTTGCTTTTAGATTTGGCATGGTTTTCTTTTCAAATGTCTAATGTCACTATGAAAAGTATTTTTGACCTTGTTTGGATTATCAATTATGTTGGTATTATGTGAACTTATAATGCACATGGGCATGATTTTACTTTATTTATGGCAATATCTTTCTTAAAATATCTTCATGAAGAACCTCTTTGACAGAGTCCTCTAATAGCTTCTTCCTTGTGCAATTAATGCATCATGTGCTGCCCTAGTAGATGCTGGAATTCCTTTAAAGCATCTTGCTGGTAATCAACTTTTATGGTCTTATTATTCATCATTTGATAAATGAATGATTGGCACTGACTACTCCGCACTGCATATTGCAGTTGCAATTTCCTGTTGTTTGTCCGAGAGTGGATGTGTTATTTTGGATCCGACCAAGCTAGAGGAGCAGGTCAGTAATATACTTTATTGAATTTATTATACTTCCTCCGGCAGTGCTTGTCCAATTCTGCGGTTACATTTTGTATGCATGTTAAGAATTAAAAAGCATAGACATGGTAAATTGGTCATGGCTGGGGTTGGGTAAGTAGTTGCAGATTATTATATTCATCAAAGAAAATGGAGCAAAGTGAAAATTGTTGACTTTGATTATCAAATGAGTGAGTTTTGAAGAAAAGTGGATTGAAATTGCAGTGGATTAAAATTGCAGAAAATGAAGGCATTTGTACATTTGGTCTTTCCGAATTCACCTGTCTCTGTAATTCCCGAAGGATCTACACAAGTTGCAGGTGAACCATTGGAGCATGGAATAATAACATCCGTAACTCAGGGTGCAATGTCAGGTATGTTGTATACAAAACCTAGCTATTTTCAAGTTGTCGTAATTGAAAACTTGCCTGTCTGTAATGAGTTTTAATGTATTTTAGGAAGTCAGTGTTTCAACAAGCTCATACTCAATATTCACTTCTATATTATGTTATCGATTTCATATTATTATACCAAGAATAAAATGCATCTTTACGGTTAAAGCGCTATTATACAATATTCTTGAGGCACCAACACATTTTGGACATGTGTCTGACTCGCCCCTATACACTCAGGCGGTCTCCACATGCCTACTGTCACACTGCAAATATCTTTTTCTTTTTTCTTTTTTCTTTAATTCTAGGCATGATCTTCGTTCACTGGACCCAATGGCACACTTCTGGGATGTACACAATAGACCATTTATTGGCAATGATCAGTGCACACGTCTCTCATCATGTCACGTACTTTCTAATGCTGTGTTATGTTCCAAATGTCACGTTTGAAAATGTATAGCATCAAAGGTCAAAACTGGTACAGTCAGTCTCCTCTTAGATTGCATATGGAAGCTGAAAAATTGTGAATGTTAGATGGAAAAGTAAGAGAAGAATCTAAGTTTGTTGTTGTTTGATGTTGTTTAAAGTGGATGATTATATTCACTGCCTGGAACGAGGGCGTGCTGCAAGTGCAAAGATGTCTGCATTTTTAAGGAGAAGCTTGCAGCCCCAACTCCCAACTGACTCCCCGAAAGCTGGCTGATCGGACACAAATCCTCTGCCTATTAAGTATTGTGCTCTACAACTAAATCTGGCTGGAAGGTAACGTGTGATTTTTTTTTTTGTGTAACAGCCAATCCATTCTAGTTGGTCTTTCTGGGCTTTCTAACCCAGAGCTGTAACAGGGCATAAATTTAAATGATGATAAAGCGTTCAAAGTGGATTTTATTATTACATTAGACGTTTACCCTTGGTTTTTTTGTTTTTTAAATTTTTGTATGCAATTGTTAGAAATTCCGAATTTTAGATTTTAAATGATGATAAAGCCTTCAAAGTAGCTTTCAGAAGAGACGAGATTCCCCTACTCCGAACATAGTTCAATGGATAAAAGTACCTATTACCTTCTCTGAGGTTGAAGGTTCAATAACCTTCTCTGAGGTTGAAGGTTCAATAAAAAAGAAGAGACAAGATTTTTAGAGGAGAGGAAAGCCTTGAGATTGATTTAGGAATCTTTTCGGGAGCCCACCTCTCTTTAGGGAGAGGTGGAAGATCAGGCTTGGAATTGATTAGGAATCTTTGTGGGAGCCATTTATGATGATAATTGCATGTATGGTGACAAAAGGGGGGTTTACAAATATGTTGCATATCAATCTTTTTGTCAGGGAAAGAAATAGTTGATCGTGATGAATCTCTCCTTATGATCGCGATGAGGTCGATGCCTCCCAATCATAGGGCAAATCAAATCAGAGTTTCCTTAGGTAGCCATGGACCAACAAATTTTAGTAGACAAATACATATATTGGACACACCCACCTCATAAAATACATAGCATAAATATTTTTGTTAATTAAGAACAAAGTGACATTCCTCACTGCATCCCTTTTACATTCAAAAGATCTTCCTCTTAAAGTTCTAATTCACAAACACAACTGCATCAGCCGAAGCATATTAGACTTTAAATCTTCAATCAACGCATCAGCTCAATCTAGTAGCTATCTTCTGCCCTTGGTAGAGGGGCATGAGATCTATCAATGAAAAAATTTTCATAGATGAAGCCAGCAAGCCCACCACCAATAAGAGGCCCAACCCAGTAAACCCAATGGTCAGTCCAGTCTCCGGCTACCAAAGCAGGCCCAAAGGATCGTGCTGGGTTCATTGAAGCTCCAGAAAAGGCCCCACCAGCCAAGATGTTGGCCCCCACCACAAACCCAGTCAACAATGGGCCCAGCCCATCAAGAGCTCCCTTCTTTGGGTCAACTATTGTTGCATAG

mRNA sequence

ATGGAATTAGACAGAGATGATGGTCGCACCCCCAACCAGTTGAGACCACTTGCTTGTTCTTGCAACATTCTCAATCGTGCTCATGGCTCCGCTAGTTGGTCCCAAGGCGATACAAAAGTCCTTGCTGCAGTATATGGACCTAAAGCAGGAACAAAAAAGAATGAAAATCCTGAGAAGGCTTCAATTGAGGTCATATGGAAACCCAAGACAGGGCAGATTGGAAAACTGGAAAGGGAGTGTGAGATGATACTAAAGAGGACATTACAGAGTATTTGCATTTTGACTATTAATCCCAACACCACAACATCTATTGTTGTTCAGGTTATTCATGATGATGGAGCTCTTCTTCCTTGTGCAATTAATGCATCATGTGCTGCCCTAGTAGATGCTGGAATTCCTTTAAAGCATCTTGCTGTTGCAATTTCCTGTTGTTTGTCCGAGAGTGGATGTGTTATTTTGGATCCGACCAAGCTAGAGGAGCAGAAAATGAAGGCATTTGTACATTTGGTCTTTCCGAATTCACCTGTCTCTGTAATTCCCGAAGGATCTACACAAGTTGCAGGTGAACCATTGGAGCATGGAATAATAACATCCGTAACTCAGGGTGCAATGTCAGTCCAGTCTCCGGCTACCAAAGCAGGCCCAAAGGATCGTGCTGGGTTCATTGAAGCTCCAGAAAAGGCCCCACCAGCCAAGATGTTGGCCCCCACCACAAACCCAGTCAACAATGGGCCCAGCCCATCAAGAGCTCCCTTCTTTGGGTCAACTATTGTTGCATAG

Coding sequence (CDS)

ATGGAATTAGACAGAGATGATGGTCGCACCCCCAACCAGTTGAGACCACTTGCTTGTTCTTGCAACATTCTCAATCGTGCTCATGGCTCCGCTAGTTGGTCCCAAGGCGATACAAAAGTCCTTGCTGCAGTATATGGACCTAAAGCAGGAACAAAAAAGAATGAAAATCCTGAGAAGGCTTCAATTGAGGTCATATGGAAACCCAAGACAGGGCAGATTGGAAAACTGGAAAGGGAGTGTGAGATGATACTAAAGAGGACATTACAGAGTATTTGCATTTTGACTATTAATCCCAACACCACAACATCTATTGTTGTTCAGGTTATTCATGATGATGGAGCTCTTCTTCCTTGTGCAATTAATGCATCATGTGCTGCCCTAGTAGATGCTGGAATTCCTTTAAAGCATCTTGCTGTTGCAATTTCCTGTTGTTTGTCCGAGAGTGGATGTGTTATTTTGGATCCGACCAAGCTAGAGGAGCAGAAAATGAAGGCATTTGTACATTTGGTCTTTCCGAATTCACCTGTCTCTGTAATTCCCGAAGGATCTACACAAGTTGCAGGTGAACCATTGGAGCATGGAATAATAACATCCGTAACTCAGGGTGCAATGTCAGTCCAGTCTCCGGCTACCAAAGCAGGCCCAAAGGATCGTGCTGGGTTCATTGAAGCTCCAGAAAAGGCCCCACCAGCCAAGATGTTGGCCCCCACCACAAACCCAGTCAACAATGGGCCCAGCCCATCAAGAGCTCCCTTCTTTGGGTCAACTATTGTTGCATAG

Protein sequence

MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIPEGSTQVAGEPLEHGIITSVTQGAMSVQSPATKAGPKDRAGFIEAPEKAPPAKMLAPTTNPVNNGPSPSRAPFFGSTIVA

Homology

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BLAST of Sgr022956 vs. NCBI nr
Match: XP_038885208.1 (exosome complex exonuclease RRP46 homolog [Benincasa hispida])

HSP 1 Score: 396.4 bits (1017), Expect = 1.9e-106
Identity = 196/206 (95.15%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DRDDGRTPNQLRPLACSCN+LNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNTTTSI+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NASCAALVDAGIPLKHLAVAISCCLSESG VILDPTKLEEQKMKAFVHLVFPNSPVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVVP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGS QV  EPLEHGIITSVTQG+MSV
Sbjct: 181 EGSRQVVDEPLEHGIITSVTQGSMSV 206

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BLAST of Sgr022956 vs. NCBI nr
Match: XP_022951618.1 (exosome complex exonuclease RRP46 homolog [Cucurbita moschata] >KAG6585390.1 Exosome complex exonuclease RRP46-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020307.1 Exosome complex exonuclease RRP46-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396.4 bits (1017), Expect = 1.9e-106
Identity = 198/206 (96.12%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DRDDGRT NQLRPLACSCN+LNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NASCAALVDAGIPLKHLAVAISCCLSESG VILDPTKLEEQKMKA VHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGSTQVAGEPLE+GIITS+TQGAMSV
Sbjct: 181 EGSTQVAGEPLENGIITSLTQGAMSV 206

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BLAST of Sgr022956 vs. NCBI nr
Match: XP_022131722.1 (exosome complex exonuclease RRP46 homolog isoform X1 [Momordica charantia] >XP_022131723.1 exosome complex exonuclease RRP46 homolog isoform X1 [Momordica charantia] >XP_022131724.1 exosome complex exonuclease RRP46 homolog isoform X1 [Momordica charantia])

HSP 1 Score: 395.6 bits (1015), Expect = 3.3e-106
Identity = 197/206 (95.63%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DRDDGRT NQLRPLACSCN+LNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSI+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NASCAALVDAGIPLKHLAVAI CCLSESG VILDPTKLEEQKMKAFVHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           +GSTQV  EPLEHGIITSVTQGAMSV
Sbjct: 181 KGSTQVVDEPLEHGIITSVTQGAMSV 206

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BLAST of Sgr022956 vs. NCBI nr
Match: XP_023002484.1 (exosome complex exonuclease RRP46 homolog [Cucurbita maxima])

HSP 1 Score: 394.8 bits (1013), Expect = 5.7e-106
Identity = 197/206 (95.63%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DRDDGRT NQLRPLACSCN+LNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NASCAALVDAGIPLKHLAVAISCCLSESG VILDPTKLEEQKMKA VHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGSTQV GEPLE+GIITS+TQGAMSV
Sbjct: 181 EGSTQVGGEPLENGIITSLTQGAMSV 206

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BLAST of Sgr022956 vs. NCBI nr
Match: XP_023538111.1 (exosome complex exonuclease RRP46 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.0 bits (1011), Expect = 9.7e-106
Identity = 197/206 (95.63%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DRDDGRT NQLRPLACSCN+LNRA+GSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEMDRDDGRTANQLRPLACSCNVLNRAYGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NASCAALVDAGIPLKHLAVAISCCLSESG VILDPTKLEEQKMKA VHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGSTQVAGEPLE+GIITS+TQGAMSV
Sbjct: 181 EGSTQVAGEPLENGIITSLTQGAMSV 206

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BLAST of Sgr022956 vs. ExPASy Swiss-Prot
Match: Q9LX74 (Exosome complex exonuclease RRP46 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP46 PE=2 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 5.7e-93
Identity = 161/206 (78.16%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DR+DGRTPNQLRPLACS NIL+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
             EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNTTTS+++QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NA+CAALVDAGIP+KHLAVAI CCL+E+G ++LDP KLEE+KM AF +LVFPN+ +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGS+   GEP+EHGIITS+T G MSV
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSV 206

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BLAST of Sgr022956 vs. ExPASy Swiss-Prot
Match: Q84T68 (Exosome complex exonuclease RRP46 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RRP46 PE=1 SV=2)

HSP 1 Score: 271.9 bits (694), Expect = 7.3e-72
Identity = 139/205 (67.80%), Postives = 162/205 (79.02%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME  R DGR PNQLRP +C+ N L+RAHGSA W+QGDT VLAAVYGPK GT+K ENPEKA
Sbjct: 1   MEESRADGRNPNQLRPFSCTRNPLDRAHGSARWAQGDTIVLAAVYGPKPGTRKGENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
           SIEV+WKP TGQIGK E+E EM LKRTLQSIC+LT++PNTTTS+++QV+ +DG+LLPCAI
Sbjct: 61  SIEVVWKPMTGQIGKQEKEYEMTLKRTLQSICLLTVHPNTTTSVILQVVGNDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NA CAALV AGIPLKHLAVAI C + E G VILD  K EEQ++K+F HLVFPNS  S   
Sbjct: 121 NACCAALVFAGIPLKHLAVAIGCGVLEDGEVILDTNKAEEQQLKSFAHLVFPNSRKSASS 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMS 206
           +   Q   E  E G+ITS+T G MS
Sbjct: 181 KEPNQ-KEEDSERGLITSITHGVMS 204

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BLAST of Sgr022956 vs. ExPASy Swiss-Prot
Match: Q9NQT4 (Exosome complex component RRP46 OS=Homo sapiens OX=9606 GN=EXOSC5 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-30
Identity = 66/152 (43.42%), Postives = 101/152 (66.45%), Query Frame = 0


Query: 14  LRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQI 73
           LR  AC  N+L+R  GSAS+ QGDT VLA VYGP       E   KA++EVI +PK G  
Sbjct: 28  LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLP 87

Query: 74  GKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAINASCAALVDAGIP 133
           G  E+  E +++ T +++ + T++P T+ ++V+QV+ D G+LL C +NA+C ALVDAG+P
Sbjct: 88  GVAEKSRERLIRNTCEAVVLGTLHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVP 147

Query: 134 LKHLAVAISCCLSESGCVILDPTKLEEQKMKA 166
           ++ L   ++C L   G ++LDPT  +E++ +A
Sbjct: 148 MRALFCGVACALDSDGTLVLDPTSKQEKEARA 179

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BLAST of Sgr022956 vs. ExPASy Swiss-Prot
Match: Q9CRA8 (Exosome complex component RRP46 OS=Mus musculus OX=10090 GN=Exosc5 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.0e-30
Identity = 65/154 (42.21%), Postives = 101/154 (65.58%), Query Frame = 0


Query: 14  LRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQI 73
           LR  AC  N+L+R  GSAS+ QGDT VLA VYGP       E   KA++EVI +PK G  
Sbjct: 28  LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLP 87

Query: 74  GKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAINASCAALVDAGIP 133
           G  E+  E +++ T +++ +  ++P T+ ++V+QV+ D G+LL C +NA+C ALVDAG+P
Sbjct: 88  GVAEKSRERLVRNTCEAVVLGALHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVP 147

Query: 134 LKHLAVAISCCLSESGCVILDPTKLEEQKMKAFV 168
           ++ L   ++C L   G ++LDPT  +E++ +A +
Sbjct: 148 MRALFCGVTCALDSDGNLVLDPTTKQEKEARAIL 181

[Close]

BLAST of Sgr022956 vs. ExPASy Swiss-Prot
Match: Q9SP08 (Exosome complex component RRP41 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP41 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-14
Identity = 46/148 (31.08%), Postives = 81/148 (54.73%), Query Frame = 0


Query: 5   RDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEV 64
           R DGR  N++R +     ++++A GSA +  G+TKV+AAVYGP+    K++  +     V
Sbjct: 10  RLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKKNDHAVV 69

Query: 65  IWKPKTGQIGKLER----------ECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGA 124
           + +    Q    +R          E  +++++T+++  +  + P++   I +QV+  DG 
Sbjct: 70  LCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIFLQVLQADGG 129

Query: 125 LLPCAINASCAALVDAGIPLKHLAVAIS 143
                INA+  AL DAGIP++ LAV+ S
Sbjct: 130 TRSACINAATLALADAGIPMRDLAVSCS 157

[Close]

BLAST of Sgr022956 vs. ExPASy TrEMBL
Match: A0A6J1GI69 (exosome complex exonuclease RRP46 homolog OS=Cucurbita moschata OX=3662 GN=LOC111454378 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 9.4e-107
Identity = 198/206 (96.12%), Postives = 203/206 (98.54%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DRDDGRT NQLRPLACSCN+LNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NASCAALVDAGIPLKHLAVAISCCLSESG VILDPTKLEEQKMKA VHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGSTQVAGEPLE+GIITS+TQGAMSV
Sbjct: 181 EGSTQVAGEPLENGIITSLTQGAMSV 206

[Close]

BLAST of Sgr022956 vs. ExPASy TrEMBL
Match: A0A6J1BU99 (exosome complex exonuclease RRP46 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004823 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.6e-106
Identity = 197/206 (95.63%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DRDDGRT NQLRPLACSCN+LNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSI+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NASCAALVDAGIPLKHLAVAI CCLSESG VILDPTKLEEQKMKAFVHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           +GSTQV  EPLEHGIITSVTQGAMSV
Sbjct: 181 KGSTQVVDEPLEHGIITSVTQGAMSV 206

[Close]

BLAST of Sgr022956 vs. ExPASy TrEMBL
Match: A0A6J1KQK5 (exosome complex exonuclease RRP46 homolog OS=Cucurbita maxima OX=3661 GN=LOC111496308 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.7e-106
Identity = 197/206 (95.63%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DRDDGRT NQLRPLACSCN+LNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NASCAALVDAGIPLKHLAVAISCCLSESG VILDPTKLEEQKMKA VHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGSTQV GEPLE+GIITS+TQGAMSV
Sbjct: 181 EGSTQVGGEPLENGIITSLTQGAMSV 206

[Close]

BLAST of Sgr022956 vs. ExPASy TrEMBL
Match: A0A0A0LLJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374620 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.4e-105
Identity = 193/206 (93.69%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DRDDGRTPNQLRPLACSCN+LNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNTTTSI+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NASCAALVDAGIPLKHLAVAISCCLSE+G VILDPTK+EE+KMKA VHLVFPN+PVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGSTQ  GEPLEHGIITSVTQGAMSV
Sbjct: 181 EGSTQGVGEPLEHGIITSVTQGAMSV 206

[Close]

BLAST of Sgr022956 vs. ExPASy TrEMBL
Match: A0A5A7VGL5 (Exosome complex exonuclease RRP46-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003630 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.0e-105
Identity = 192/206 (93.20%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DRDDGRTPNQLRPLACSCN+LNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNTTTSI+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NASCAALVDAGIPLKHLAVAISCCLSE+G VILDPTK+EE+KMKA VHLVFPN+PVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNTPVSVVP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGSTQ  GEPLEHG+ITSVTQGAMSV
Sbjct: 181 EGSTQGVGEPLEHGMITSVTQGAMSV 206

[Close]

BLAST of Sgr022956 vs. TAIR 10
Match: AT3G46210.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 342.0 bits (876), Expect = 4.1e-94
Identity = 161/206 (78.16%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DR+DGRTPNQLRPLACS NIL+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
             EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNTTTS+++QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NA+CAALVDAGIP+KHLAVAI CCL+E+G ++LDP KLEE+KM AF +LVFPN+ +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGS+   GEP+EHGIITS+T G MSV
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSV 206

[Close]

BLAST of Sgr022956 vs. TAIR 10
Match: AT3G46210.2 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 342.0 bits (876), Expect = 4.1e-94
Identity = 161/206 (78.16%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DR+DGRTPNQLRPLACS NIL+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
             EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNTTTS+++QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NA+CAALVDAGIP+KHLAVAI CCL+E+G ++LDP KLEE+KM AF +LVFPN+ +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGS+   GEP+EHGIITS+T G MSV
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSV 206

[Close]

BLAST of Sgr022956 vs. TAIR 10
Match: AT3G46210.3 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 342.0 bits (876), Expect = 4.1e-94
Identity = 161/206 (78.16%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DR+DGRTPNQLRPLACS NIL+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
             EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNTTTS+++QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NA+CAALVDAGIP+KHLAVAI CCL+E+G ++LDP KLEE+KM AF +LVFPN+ +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGS+   GEP+EHGIITS+T G MSV
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSV 206

[Close]

BLAST of Sgr022956 vs. TAIR 10
Match: AT3G46210.4 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 342.0 bits (876), Expect = 4.1e-94
Identity = 161/206 (78.16%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DR+DGRTPNQLRPLACS NIL+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
             EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNTTTS+++QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NA+CAALVDAGIP+KHLAVAI CCL+E+G ++LDP KLEE+KM AF +LVFPN+ +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGS+   GEP+EHGIITS+T G MSV
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSV 206

[Close]

BLAST of Sgr022956 vs. TAIR 10
Match: AT3G46210.5 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 342.0 bits (876), Expect = 4.1e-94
Identity = 161/206 (78.16%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 1   MELDRDDGRTPNQLRPLACSCNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DR+DGRTPNQLRPLACS NIL+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
             EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNTTTS+++QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSESGCVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
           NA+CAALVDAGIP+KHLAVAI CCL+E+G ++LDP KLEE+KM AF +LVFPN+ +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 181 EGSTQVAGEPLEHGIITSVTQGAMSV 207
           EGS+   GEP+EHGIITS+T G MSV
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSV 206

The following BLAST results are available for this feature:

BLAST of Sgr022956 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885208.1	1.9e-106	95.15	exosome complex exonuclease RRP46 homolog [Benincasa hispida]	[more]
XP_022951618.1	1.9e-106	96.12	exosome complex exonuclease RRP46 homolog [Cucurbita moschata] >KAG6585390.1 Exo...	[more]
XP_022131722.1	3.3e-106	95.63	exosome complex exonuclease RRP46 homolog isoform X1 [Momordica charantia] >XP_0...	[more]
XP_023002484.1	5.7e-106	95.63	exosome complex exonuclease RRP46 homolog [Cucurbita maxima]	[more]
XP_023538111.1	9.7e-106	95.63	exosome complex exonuclease RRP46 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sgr022956 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LX74	5.7e-93	78.16	Exosome complex exonuclease RRP46 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP...	[more]
Q84T68	7.3e-72	67.80	Exosome complex exonuclease RRP46 homolog OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9NQT4	1.1e-30	43.42	Exosome complex component RRP46 OS=Homo sapiens OX=9606 GN=EXOSC5 PE=1 SV=1	[more]
Q9CRA8	9.0e-30	42.21	Exosome complex component RRP46 OS=Mus musculus OX=10090 GN=Exosc5 PE=1 SV=1	[more]
Q9SP08	1.8e-14	31.08	Exosome complex component RRP41 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP41...	[more]

BLAST of Sgr022956 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GI69	9.4e-107	96.12	exosome complex exonuclease RRP46 homolog OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1BU99	1.6e-106	95.63	exosome complex exonuclease RRP46 homolog isoform X1 OS=Momordica charantia OX=3...	[more]
A0A6J1KQK5	2.7e-106	95.63	exosome complex exonuclease RRP46 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0LLJ9	1.4e-105	93.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374620 PE=4 SV=1	[more]
A0A5A7VGL5	3.0e-105	93.20	Exosome complex exonuclease RRP46-like protein OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Sgr022956 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46210.1	4.1e-94	78.16	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G46210.2	4.1e-94	78.16	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G46210.3	4.1e-94	78.16	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G46210.4	4.1e-94	78.16	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G46210.5	4.1e-94	78.16	Ribosomal protein S5 domain 2-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001247	Exoribonuclease, phosphorolytic domain 1	PFAM	PF01138	RNase_PH	coord: 13..133 e-value: 5.6E-25 score: 88.4
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 1..210 e-value: 3.6E-63 score: 215.2
None	No IPR available	PANTHER	PTHR11953:SF1	EXOSOME COMPLEX COMPONENT RRP46	coord: 1..207
None	No IPR available	PANTHER	PTHR11953	EXOSOME COMPLEX COMPONENT	coord: 1..207
None	No IPR available	CDD	cd11372	RNase_PH_RRP46	coord: 14..207 e-value: 4.23574E-76 score: 227.447
IPR036345	Exoribonuclease, PH domain 2 superfamily	SUPERFAMILY	55666	Ribonuclease PH domain 2-like	coord: 133..174
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 11..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr022956.1	Sgr022956.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0071028	nuclear mRNA surveillance
biological_process	GO:0034427	nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
biological_process	GO:0071051	polyadenylation-dependent snoRNA 3'-end processing
biological_process	GO:0090501	RNA phosphodiester bond hydrolysis
biological_process	GO:0016075	rRNA catabolic process
biological_process	GO:0034475	U4 snRNA 3'-end processing
cellular_component	GO:0000177	cytoplasmic exosome (RNase complex)
cellular_component	GO:0000176	nuclear exosome (RNase complex)
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0004536	deoxyribonuclease activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0004540	ribonuclease activity
molecular_function	GO:0003727	single-stranded RNA binding