Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTCATAACTGCAGAGAAGCTTTTTGCCACGAAGTATTGTTACAGAAAAAGCCAACTCTTCCTCTTCAATCTCAGTCTTCACTCTCTCATCGTCTTCTTCTTTAGTTTTCTGCTTTCCTCCCAATCTCATCGGTTTCCTCCCGACACACTTTCTTCGATGATCCGAATGGTGGTTACGCCGCCCTCGTTCTTCAGCCCGAGATGCTTGTTCGTTGTCGTCAATGTCATCATCGTCTACATTGTCGGAGAACGGAAGCTCACTGGTGCAAAATCATCTTCGGTGAACCGAATGTATGAAGAGTACTGTGTTGAGAAGACGGAGGAGATGAGTGTGAGTCGTGATGAAGATATGAGGGAATTGGTTGAGAAAGTTGCAGAAGAAGAAGAGGAAGAGGAAGAGGTCGGTGCCGTTAACGACGACGGTGCAGCCGATGGAGGTGAAAAGGAGAAGGAAAGGGAAGAAGAAGACGATGGTGGGTTGGCGAATGAGGAGCTGAATAAAAGAGCAGAAGCGTTCATTGCAAGAGTTAACAAGCAAAGAAGGCTTGAAGCTGTGAATTGTTTCCAATGGTAG
mRNA sequence
ATGGATGTCATAACTGCAGAGAAGCTTTTTGCCACGAAGTATTGTTACAGAAAAAGCCAACTCTTCCTCTTCAATCTCAGTCTTCACTCTCTCATCGTCTTCTTCTTTAGTTTTCTGCTTTCCTCCCAATCTCATCGGTTTCCTCCCGACACACTTTCTTCGATGATCCGAATGGTGGTTACGCCGCCCTCGTTCTTCAGCCCGAGATGCTTGTTCGTTGTCGTCAATGTCATCATCGTCTACATTGTCGGAGAACGGAAGCTCACTGGTGCAAAATCATCTTCGGTGAACCGAATGTATGAAGAGTACTGTGTTGAGAAGACGGAGGAGATGAGTGTGAGTCGTGATGAAGATATGAGGGAATTGGTTGAGAAAGTTGCAGAAGAAGAAGAGGAAGAGGAAGAGGTCGGTGCCGTTAACGACGACGGTGCAGCCGATGGAGGTGAAAAGGAGAAGGAAAGGGAAGAAGAAGACGATGGTGGGTTGGCGAATGAGGAGCTGAATAAAAGAGCAGAAGCGTTCATTGCAAGAGTTAACAAGCAAAGAAGGCTTGAAGCTGTGAATTGTTTCCAATGGTAG
Coding sequence (CDS)
ATGGATGTCATAACTGCAGAGAAGCTTTTTGCCACGAAGTATTGTTACAGAAAAAGCCAACTCTTCCTCTTCAATCTCAGTCTTCACTCTCTCATCGTCTTCTTCTTTAGTTTTCTGCTTTCCTCCCAATCTCATCGGTTTCCTCCCGACACACTTTCTTCGATGATCCGAATGGTGGTTACGCCGCCCTCGTTCTTCAGCCCGAGATGCTTGTTCGTTGTCGTCAATGTCATCATCGTCTACATTGTCGGAGAACGGAAGCTCACTGGTGCAAAATCATCTTCGGTGAACCGAATGTATGAAGAGTACTGTGTTGAGAAGACGGAGGAGATGAGTGTGAGTCGTGATGAAGATATGAGGGAATTGGTTGAGAAAGTTGCAGAAGAAGAAGAGGAAGAGGAAGAGGTCGGTGCCGTTAACGACGACGGTGCAGCCGATGGAGGTGAAAAGGAGAAGGAAAGGGAAGAAGAAGACGATGGTGGGTTGGCGAATGAGGAGCTGAATAAAAGAGCAGAAGCGTTCATTGCAAGAGTTAACAAGCAAAGAAGGCTTGAAGCTGTGAATTGTTTCCAATGGTAG
Protein sequence
MDVITAEKLFATKYCYRKSQLFLFNLSLHSLIVFFFSFLLSSQSHRFPPDTLSSMIRMVVTPPSFFSPRCLFVVVNVIIVYIVGERKLTGAKSSSVNRMYEEYCVEKTEEMSVSRDEDMRELVEKVAEEEEEEEEVGAVNDDGAADGGEKEKEREEEDDGGLANEELNKRAEAFIARVNKQRRLEAVNCFQW
Homology
BLAST of Sgr021919 vs. NCBI nr
Match:
XP_038875115.1 (uncharacterized protein LOC120067646 [Benincasa hispida])
HSP 1 Score: 216.1 bits (549), Expect = 2.7e-52
Identity = 128/191 (67.02%), Postives = 156/191 (81.68%), Query Frame = 0
Query: 1 MDVITAEKLFATKYCYRKSQLFLFNLSL-HSLIVFFFSFLLSSQSHRFPPDTLSSMIRMV 60
MDVI+AEKLFA KYCY+KSQLFL+NL+L HSLI+FFF+F LSSQ FPPD LSSMI MV
Sbjct: 1 MDVISAEKLFAIKYCYKKSQLFLYNLNLFHSLIIFFFTFWLSSQFDCFPPDALSSMINMV 60
Query: 61 VTPPSFFSPRCLFVVVNVIIVYIVGERKLTGAKSSSV-NRMYEEYCVEKTEEMSVSRDED 120
V PPSFFSP C FV+VN I++YIVGE+KL GA+SSS+ N+MY+EY + KT EM+++ E+
Sbjct: 61 VMPPSFFSPSCFFVIVNFIVIYIVGEQKLAGAESSSIMNKMYDEYYIGKTMEMNMNSCEN 120
Query: 121 MRELVEKVAEEEEEEEEVGAVNDDGAADGGEKEKEREEEDDGGLANEELNKRAEAFIARV 180
M++LVEKV EE+EEEE+G V D DG + ++ E E D LANEELNKRAEAFIARV
Sbjct: 121 MKQLVEKVV-EEKEEEEMGFVEGDN--DGVDVSEKLETEGDCELANEELNKRAEAFIARV 180
Query: 181 NKQRRLEAVNC 190
NKQR+LEAV+C
Sbjct: 181 NKQRKLEAVDC 188
BLAST of Sgr021919 vs. NCBI nr
Match:
KAA0039829.1 (DUF4408 domain-containing protein [Cucumis melo var. makuwa] >TYK24670.1 DUF4408 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 213.0 bits (541), Expect = 2.3e-51
Identity = 124/195 (63.59%), Postives = 158/195 (81.03%), Query Frame = 0
Query: 1 MDVITAEKLFATKYCYRKSQLFLFNLSLHS--LIVFFFSF-LLSSQSHRFPPDTLSSMIR 60
MDVI AEKLFA KYCY+KSQLFL+NL+L +I+FFF++ L+SSQSH FPPDT+SS+I+
Sbjct: 1 MDVINAEKLFAIKYCYKKSQLFLYNLNLFRSLIIIFFFTYWLISSQSHYFPPDTISSIIK 60
Query: 61 MVVTPPSFFSPRCLFVVVNVIIVYIVGERKLTGAKSSSVNRMYEEYCVEKTEEMS--VSR 120
+V+TPPSFFSP CLFV+VN I+VYIVGE+KLT AKS+S+N MY+EY +E+T EM ++
Sbjct: 61 IVITPPSFFSPSCLFVIVNFIVVYIVGEQKLTSAKSASMNIMYDEYYIERTMEMKHYLNP 120
Query: 121 DEDMRELVEKVAEEEEEEEEVGAVNDDGAADGGEKEKEREEEDDGGLANEELNKRAEAFI 180
E+M++LVEK EE+EEE +G+++DD D +K E E D ANEELNKRAEAFI
Sbjct: 121 CENMKQLVEKTV-EEKEEEGIGSIDDDNGVDFIDK----ENEGDCKFANEELNKRAEAFI 180
Query: 181 ARVNKQRRLEAVNCF 191
ARVNKQR+LEAV+CF
Sbjct: 181 ARVNKQRKLEAVDCF 190
BLAST of Sgr021919 vs. NCBI nr
Match:
KAE8646757.1 (hypothetical protein Csa_004884 [Cucumis sativus])
HSP 1 Score: 208.4 bits (529), Expect = 5.6e-50
Identity = 123/190 (64.74%), Postives = 151/190 (79.47%), Query Frame = 0
Query: 1 MDVITAEKLFATKYCYRKSQLFLFNLSL-HSLIVFFFSFLLSSQSHRFPPDTLSSMIRMV 60
MDVI AEKLFA KYCY+KSQLFL+NL++ HSLI FF++ LSSQSH FPPDT+SS+I+MV
Sbjct: 1 MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFLFFTYWLSSQSHYFPPDTISSIIKMV 60
Query: 61 VTPPSFFSPRCLFVVVNVIIVYIVGERKLTGAKSSSVNRMYEEYCVEKTEEMS-VSRDED 120
TPPSFFSP CLFV+VN I+VYIVGE+KLTGAKS+ +N MY+EY +E+T EM ++ E+
Sbjct: 61 ATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMNTMYDEYYIERTLEMKYLNPCEN 120
Query: 121 MRELVEKVAEEEEEEEEVGAVNDDGAADGGEKEKEREEEDDGGLANEELNKRAEAFIARV 180
M+ELV + EE+EEE + + D D G E+E E D LANEELNKRAEAFIARV
Sbjct: 121 MKELVVEKFVEEKEEEGISPIED----DNGIGFSEKENEGDCKLANEELNKRAEAFIARV 180
Query: 181 NKQRRLEAVN 189
NKQR+LEAV+
Sbjct: 181 NKQRKLEAVD 186
BLAST of Sgr021919 vs. NCBI nr
Match:
XP_034200059.1 (cilia- and flagella-associated protein 251-like [Prunus dulcis] >VVA19973.1 PREDICTED: L484_010133 [Prunus dulcis])
HSP 1 Score: 98.2 bits (243), Expect = 8.1e-17
Identity = 88/232 (37.93%), Postives = 124/232 (53.45%), Query Frame = 0
Query: 1 MDVITAEKLFATKYCYRK---SQLFLFNLSLHSLIVFFFSFLLSSQSHRFPPDTLSSMIR 60
MD I EKL A K Y+K SQ+F ++L +H L++ LL S SH FP + +
Sbjct: 1 MDPIKGEKLRAMK-SYKKQNNSQIF-YSLIVH-LLIAIACCLLCSYSHWFPSLYTAKHLL 60
Query: 61 MVVTPPS---FFSPRCLFVVVNVIIVYIVGERKLTGAKSSSVNRMYEEYC---------- 120
+ P S FF+PRCLF+VVN I+V+++GE +L+G +SS N MY EY
Sbjct: 61 FMSLPNSWSGFFNPRCLFIVVNFIVVFLIGESRLSGRQSSPANEMYNEYVERTRSLRAPT 120
Query: 121 -------VEKTEEMSVSRDEDMRELVEKV-----------------------AEEEEEEE 180
E+TE +S+ ED +++E+ +EEE+EE
Sbjct: 121 SMFQEKKEERTELPILSQKEDNAKILEEKEVDETKEDKHEVDQDEDFKECEGTDEEEKEE 180
Query: 181 EVGAVNDDGAADGGEKEKEREEEDDGGLANEELNKRAEAFIARVNKQRRLEA 187
E+ ++ + E+E+E EEE+ G+ EELNKR EAFIARVNKQR LEA
Sbjct: 181 EIEKKEEEIEQEKKEEEEEEEEEEAAGIPAEELNKRVEAFIARVNKQRSLEA 229
BLAST of Sgr021919 vs. NCBI nr
Match:
XP_028076840.1 (uncharacterized protein LOC114278877 [Camellia sinensis])
HSP 1 Score: 97.8 bits (242), Expect = 1.1e-16
Identity = 89/190 (46.84%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 1 MDVITAEKLFATKYCYRKSQLFLFNLSLHSLIVFFFSFLLSSQSHRFPPDTLSSMIRMVV 60
MD I AEKL A K ++K Q FL NL LHSL FS L S S FP L S ++ V
Sbjct: 6 MDSIEAEKLQAMKN-FKKHQ-FLNNLILHSLTALAFSLLCSYPSW-FP--LLCSFVKHFV 65
Query: 61 TPPSFFSPRCLFVVVNVIIVYIVGERKLTGAKSSSVNRMYEEYCVEKTEEMSVSRDEDMR 120
+ FF+P+CLFVV N IIV++VGE KL ++SS M E+ E+ EM++S
Sbjct: 66 S--LFFTPKCLFVVGNAIIVFLVGESKLASSRSSPAIHM-EKKEEERKLEMNLS-----E 125
Query: 121 ELVEKVAEEEEEEEEVGAVNDDGAADG----GEKEKEREEEDDGGLANEELNKRAEAFIA 180
E V K+ E EEE+ DDG G ++E+ER+EE++ GL EE NKR E FIA
Sbjct: 126 ESVNKIEEREEEQVRNDEYGDDGLIGGDNHDNKEEEERDEEEELGLPTEEFNKRVEDFIA 182
Query: 181 RVNKQRRLEA 187
+VNKQR LEA
Sbjct: 186 KVNKQRLLEA 182
BLAST of Sgr021919 vs. ExPASy TrEMBL
Match:
A0A0A0K9L0 (DUF4408 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094140 PE=4 SV=1)
HSP 1 Score: 214.5 bits (545), Expect = 3.8e-52
Identity = 125/192 (65.10%), Postives = 153/192 (79.69%), Query Frame = 0
Query: 1 MDVITAEKLFATKYCYRKSQLFLFNLSL-HSLIVFFFSFLLSSQSHRFPPDTLSSMIRMV 60
MDVI AEKLFA KYCY+KSQLFL+NL++ HSLI FF++ LSSQSH FPPDT+SS+I+MV
Sbjct: 1 MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFLFFTYWLSSQSHYFPPDTISSIIKMV 60
Query: 61 VTPPSFFSPRCLFVVVNVIIVYIVGERKLTGAKSSSVNRMYEEYCVEKTEEMS-VSRDED 120
TPPSFFSP CLFV+VN I+VYIVGE+KLTGAKS+ +N MY+EY +E+T EM ++ E+
Sbjct: 61 ATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMNTMYDEYYIERTLEMKYLNPCEN 120
Query: 121 MRELVEKVAEEEEEEEEVGAVNDDGAADGGEKEKEREEEDDGGLANEELNKRAEAFIARV 180
M+ELV + EE+EEE + + D D G E+E E D LANEELNKRAEAFIARV
Sbjct: 121 MKELVVEKFVEEKEEEGISPIED----DNGIGFSEKENEGDCKLANEELNKRAEAFIARV 180
Query: 181 NKQRRLEAVNCF 191
NKQR+LEAV+CF
Sbjct: 181 NKQRKLEAVDCF 188
BLAST of Sgr021919 vs. ExPASy TrEMBL
Match:
A0A5D3DN17 (DUF4408 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002200 PE=4 SV=1)
HSP 1 Score: 213.0 bits (541), Expect = 1.1e-51
Identity = 124/195 (63.59%), Postives = 158/195 (81.03%), Query Frame = 0
Query: 1 MDVITAEKLFATKYCYRKSQLFLFNLSLHS--LIVFFFSF-LLSSQSHRFPPDTLSSMIR 60
MDVI AEKLFA KYCY+KSQLFL+NL+L +I+FFF++ L+SSQSH FPPDT+SS+I+
Sbjct: 1 MDVINAEKLFAIKYCYKKSQLFLYNLNLFRSLIIIFFFTYWLISSQSHYFPPDTISSIIK 60
Query: 61 MVVTPPSFFSPRCLFVVVNVIIVYIVGERKLTGAKSSSVNRMYEEYCVEKTEEMS--VSR 120
+V+TPPSFFSP CLFV+VN I+VYIVGE+KLT AKS+S+N MY+EY +E+T EM ++
Sbjct: 61 IVITPPSFFSPSCLFVIVNFIVVYIVGEQKLTSAKSASMNIMYDEYYIERTMEMKHYLNP 120
Query: 121 DEDMRELVEKVAEEEEEEEEVGAVNDDGAADGGEKEKEREEEDDGGLANEELNKRAEAFI 180
E+M++LVEK EE+EEE +G+++DD D +K E E D ANEELNKRAEAFI
Sbjct: 121 CENMKQLVEKTV-EEKEEEGIGSIDDDNGVDFIDK----ENEGDCKFANEELNKRAEAFI 180
Query: 181 ARVNKQRRLEAVNCF 191
ARVNKQR+LEAV+CF
Sbjct: 181 ARVNKQRKLEAVDCF 190
BLAST of Sgr021919 vs. ExPASy TrEMBL
Match:
A0A5E4EWE0 (PREDICTED: L484_010133 OS=Prunus dulcis OX=3755 GN=ALMOND_2B009142 PE=4 SV=1)
HSP 1 Score: 98.2 bits (243), Expect = 3.9e-17
Identity = 88/232 (37.93%), Postives = 124/232 (53.45%), Query Frame = 0
Query: 1 MDVITAEKLFATKYCYRK---SQLFLFNLSLHSLIVFFFSFLLSSQSHRFPPDTLSSMIR 60
MD I EKL A K Y+K SQ+F ++L +H L++ LL S SH FP + +
Sbjct: 1 MDPIKGEKLRAMK-SYKKQNNSQIF-YSLIVH-LLIAIACCLLCSYSHWFPSLYTAKHLL 60
Query: 61 MVVTPPS---FFSPRCLFVVVNVIIVYIVGERKLTGAKSSSVNRMYEEYC---------- 120
+ P S FF+PRCLF+VVN I+V+++GE +L+G +SS N MY EY
Sbjct: 61 FMSLPNSWSGFFNPRCLFIVVNFIVVFLIGESRLSGRQSSPANEMYNEYVERTRSLRAPT 120
Query: 121 -------VEKTEEMSVSRDEDMRELVEKV-----------------------AEEEEEEE 180
E+TE +S+ ED +++E+ +EEE+EE
Sbjct: 121 SMFQEKKEERTELPILSQKEDNAKILEEKEVDETKEDKHEVDQDEDFKECEGTDEEEKEE 180
Query: 181 EVGAVNDDGAADGGEKEKEREEEDDGGLANEELNKRAEAFIARVNKQRRLEA 187
E+ ++ + E+E+E EEE+ G+ EELNKR EAFIARVNKQR LEA
Sbjct: 181 EIEKKEEEIEQEKKEEEEEEEEEEAAGIPAEELNKRVEAFIARVNKQRSLEA 229
BLAST of Sgr021919 vs. ExPASy TrEMBL
Match:
A0A7J7HKM5 (DUF4408 domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_010735 PE=4 SV=1)
HSP 1 Score: 97.8 bits (242), Expect = 5.1e-17
Identity = 89/190 (46.84%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 1 MDVITAEKLFATKYCYRKSQLFLFNLSLHSLIVFFFSFLLSSQSHRFPPDTLSSMIRMVV 60
MD I AEKL A K ++K Q FL NL LHSL FS L S S FP L S ++ V
Sbjct: 1 MDSIEAEKLQAMKN-FKKHQ-FLNNLILHSLTALAFSLLCSYPSW-FP--LLCSFVKHFV 60
Query: 61 TPPSFFSPRCLFVVVNVIIVYIVGERKLTGAKSSSVNRMYEEYCVEKTEEMSVSRDEDMR 120
+ FF+P+CLFVV N IIV++VGE KL ++SS M E+ E+ EM++S
Sbjct: 61 S--LFFTPKCLFVVGNAIIVFLVGESKLASSRSSPAIHM-EKKEEERKLEMNLS-----E 120
Query: 121 ELVEKVAEEEEEEEEVGAVNDDGAADG----GEKEKEREEEDDGGLANEELNKRAEAFIA 180
E V K+ E EEE+ DDG G ++E+ER+EE++ GL EE NKR E FIA
Sbjct: 121 ESVNKIEEREEEQVRNDEYGDDGLIGGDNHDNKEEEERDEEEELGLPTEEFNKRVEDFIA 177
Query: 181 RVNKQRRLEA 187
+VNKQR LEA
Sbjct: 181 KVNKQRLLEA 177
BLAST of Sgr021919 vs. ExPASy TrEMBL
Match:
A0A4S4E5F7 (DUF4408 domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_030202 PE=4 SV=1)
HSP 1 Score: 97.8 bits (242), Expect = 5.1e-17
Identity = 89/190 (46.84%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 1 MDVITAEKLFATKYCYRKSQLFLFNLSLHSLIVFFFSFLLSSQSHRFPPDTLSSMIRMVV 60
MD I AEKL A K ++K Q FL NL LHSL FS L S S FP L S ++ V
Sbjct: 1 MDSIEAEKLQAMKN-FKKHQ-FLNNLILHSLTALAFSLLCSYPSW-FP--LLCSFVKHFV 60
Query: 61 TPPSFFSPRCLFVVVNVIIVYIVGERKLTGAKSSSVNRMYEEYCVEKTEEMSVSRDEDMR 120
+ FF+P+CLFVV N IIV++VGE KL ++SS M E+ E+ EM++S
Sbjct: 61 S--LFFTPKCLFVVGNAIIVFLVGESKLASSRSSPAIHM-EKKEEERKLEMNLS-----E 120
Query: 121 ELVEKVAEEEEEEEEVGAVNDDGAADG----GEKEKEREEEDDGGLANEELNKRAEAFIA 180
E V K+ E EEE+ DDG G ++E+ER+EE++ GL EE NKR E FIA
Sbjct: 121 ESVNKIEEREEEQVRNDEYGDDGLIGGDNHDNKEEEERDEEEELGLPTEEFNKRVEDFIA 177
Query: 181 RVNKQRRLEA 187
+VNKQR LEA
Sbjct: 181 KVNKQRLLEA 177
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038875115.1 | 2.7e-52 | 67.02 | uncharacterized protein LOC120067646 [Benincasa hispida] | [more] |
KAA0039829.1 | 2.3e-51 | 63.59 | DUF4408 domain-containing protein [Cucumis melo var. makuwa] >TYK24670.1 DUF4408... | [more] |
KAE8646757.1 | 5.6e-50 | 64.74 | hypothetical protein Csa_004884 [Cucumis sativus] | [more] |
XP_034200059.1 | 8.1e-17 | 37.93 | cilia- and flagella-associated protein 251-like [Prunus dulcis] >VVA19973.1 PRED... | [more] |
XP_028076840.1 | 1.1e-16 | 46.84 | uncharacterized protein LOC114278877 [Camellia sinensis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K9L0 | 3.8e-52 | 65.10 | DUF4408 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094140 PE=... | [more] |
A0A5D3DN17 | 1.1e-51 | 63.59 | DUF4408 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5E4EWE0 | 3.9e-17 | 37.93 | PREDICTED: L484_010133 OS=Prunus dulcis OX=3755 GN=ALMOND_2B009142 PE=4 SV=1 | [more] |
A0A7J7HKM5 | 5.1e-17 | 46.84 | DUF4408 domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_010735 P... | [more] |
A0A4S4E5F7 | 5.1e-17 | 46.84 | DUF4408 domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 G... | [more] |
Match Name | E-value | Identity | Description | |