Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGACAGTCACCGGGAGGGTGGTTTCTTCGAAGCCTATCTCTCTCTCCAAAGCGGCGTCCACACTCTCCTCCTTCCTCTCCACCGATAATGGCGCTTCCCAAGCACTCTGCGCGTACCTCAGACGCGCCTCCGCCTCTTTCAACGAGTTAAAGCAGCTCCACAAGGAGCTGAAGTCTTCGCGGCCAGATCGAAAGCACCGCGATCACAGATCGGAGCTTTTCAGTGATGTAGAGGCTGCCGTTGATAATCCATATCGGAACGAGGTGAATCATGATCTCAGTCATCGGATCGAAGACAGCGAGAGGAAAAAATCTTCAGTTTCTGAGAGCAAAAGCGGGAAGAAGGGGCGGGAGAGTAGGGACCGAACCGAGGGTAAGTCGATCCCCAGTGTCCAATCTGGTCAAGAATCAAGCCGTGAGTATCGAGAGGATGAGCGGGTGGATGGGGAAACAACAATGGCAAGAGGTGGGAATGGTAATCTTGAGGATGGAAGGAAAAGGGGCGGCGAATTGAAAACTGAAGTTGAAGATAAACCTAGCGGAAGAGTTGAGATGGTTGTGGAATCAAGCGATAGAGAGAAGAGCTCTGTAGCAGTTGAGAATAGGATAAAAAAGAACAAGAAAAAGAGCGAGGAGAAGAACAATGATGGTGGAGAAGATCTTGTGGAGCTACCGACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGAAGAAGATGCTGACGATCTTCTAAATAACAGTGGAGGAGCTATAGAGAAAGAGGGAATGCCAGTTTTGGATAGTAAAGAGTTGAAAAGGAAAGAAGGGAAAAAGAGGAAGAATCGAGACTTAGAAGAAAAAGGGGGTGACGATGGTTCAGAGGAGCAGCAGGGGACAAAGAGAAGGAAAGGAAACTTATGA
mRNA sequence
ATGAAGACAGTCACCGGGAGGGTGGTTTCTTCGAAGCCTATCTCTCTCTCCAAAGCGGCGTCCACACTCTCCTCCTTCCTCTCCACCGATAATGGCGCTTCCCAAGCACTCTGCGCGTACCTCAGACGCGCCTCCGCCTCTTTCAACGAGTTAAAGCAGCTCCACAAGGAGCTGAAGTCTTCGCGGCCAGATCGAAAGCACCGCGATCACAGATCGGAGCTTTTCAGTGATGTAGAGGCTGCCGTTGATAATCCATATCGGAACGAGGTGAATCATGATCTCAGTCATCGGATCGAAGACAGCGAGAGGAAAAAATCTTCAGTTTCTGAGAGCAAAAGCGGGAAGAAGGGGCGGGAGAGTAGGGACCGAACCGAGGGTAAGTCGATCCCCAGTGTCCAATCTGGTCAAGAATCAAGCCGTGAGTATCGAGAGGATGAGCGGGTGGATGGGGAAACAACAATGGCAAGAGGTGGGAATGGTAATCTTGAGGATGGAAGGAAAAGGGGCGGCGAATTGAAAACTGAAGTTGAAGATAAACCTAGCGGAAGAGTTGAGATGGTTGTGGAATCAAGCGATAGAGAGAAGAGCTCTGTAGCAGTTGAGAATAGGATAAAAAAGAACAAGAAAAAGAGCGAGGAGAAGAACAATGATGGTGGAGAAGATCTTGTGGAGCTACCGACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGAAGAAGATGCTGACGATCTTCTAAATAACAGTGGAGGAGCTATAGAGAAAGAGGGAATGCCAGTTTTGGATAGTAAAGAGTTGAAAAGGAAAGAAGGGAAAAAGAGGAAGAATCGAGACTTAGAAGAAAAAGGGGGTGACGATGGTTCAGAGGAGCAGCAGGGGACAAAGAGAAGGAAAGGAAACTTATGA
Coding sequence (CDS)
ATGAAGACAGTCACCGGGAGGGTGGTTTCTTCGAAGCCTATCTCTCTCTCCAAAGCGGCGTCCACACTCTCCTCCTTCCTCTCCACCGATAATGGCGCTTCCCAAGCACTCTGCGCGTACCTCAGACGCGCCTCCGCCTCTTTCAACGAGTTAAAGCAGCTCCACAAGGAGCTGAAGTCTTCGCGGCCAGATCGAAAGCACCGCGATCACAGATCGGAGCTTTTCAGTGATGTAGAGGCTGCCGTTGATAATCCATATCGGAACGAGGTGAATCATGATCTCAGTCATCGGATCGAAGACAGCGAGAGGAAAAAATCTTCAGTTTCTGAGAGCAAAAGCGGGAAGAAGGGGCGGGAGAGTAGGGACCGAACCGAGGGTAAGTCGATCCCCAGTGTCCAATCTGGTCAAGAATCAAGCCGTGAGTATCGAGAGGATGAGCGGGTGGATGGGGAAACAACAATGGCAAGAGGTGGGAATGGTAATCTTGAGGATGGAAGGAAAAGGGGCGGCGAATTGAAAACTGAAGTTGAAGATAAACCTAGCGGAAGAGTTGAGATGGTTGTGGAATCAAGCGATAGAGAGAAGAGCTCTGTAGCAGTTGAGAATAGGATAAAAAAGAACAAGAAAAAGAGCGAGGAGAAGAACAATGATGGTGGAGAAGATCTTGTGGAGCTACCGACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGAAGAAGATGCTGACGATCTTCTAAATAACAGTGGAGGAGCTATAGAGAAAGAGGGAATGCCAGTTTTGGATAGTAAAGAGTTGAAAAGGAAAGAAGGGAAAAAGAGGAAGAATCGAGACTTAGAAGAAAAAGGGGGTGACGATGGTTCAGAGGAGCAGCAGGGGACAAAGAGAAGGAAAGGAAACTTATGA
Protein sequence
MKTVTGRVVSSKPISLSKAASTLSSFLSTDNGASQALCAYLRRASASFNELKQLHKELKSSRPDRKHRDHRSELFSDVEAAVDNPYRNEVNHDLSHRIEDSERKKSSVSESKSGKKGRESRDRTEGKSIPSVQSGQESSREYREDERVDGETTMARGGNGNLEDGRKRGGELKTEVEDKPSGRVEMVVESSDREKSSVAVENRIKKNKKKSEEKNNDGGEDLVELPTKKKKKKKKKKREEDADDLLNNSGGAIEKEGMPVLDSKELKRKEGKKRKNRDLEEKGGDDGSEEQQGTKRRKGNL
Homology
BLAST of Sgr021473 vs. NCBI nr
Match:
XP_022146269.1 (nuclear speckle splicing regulatory protein 1 [Momordica charantia])
HSP 1 Score: 335.1 bits (858), Expect = 6.2e-88
Identity = 229/385 (59.48%), Postives = 250/385 (64.94%), Query Frame = 0
Query: 1 MKTVTGRVVSSKPISLSKAASTLSSFLSTDNGASQALCAYLRRASASFNELKQLHKELKS 60
MKTVTGRV+SSKPISLSKAASTLSSFLSTDNGAS A CAYLRRASASFNELKQLHKELKS
Sbjct: 1 MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
Query: 61 SRPDRKHRDHRSELFSDVEAAVDNPYRNEVNHDLSHRIEDSERKKSSVSESKSGKKGRES 120
SR DRKHR HRSE+FS +E AVD YR+E +H ++HRIE E+K SSVSESKSGKK R+S
Sbjct: 61 SRSDRKHRHHRSEVFSGLEVAVDETYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120
Query: 121 RDRTEGKSIPSVQSGQESSREYREDERVDGETTMARGGNGNL-----EDGRKRGGELKTE 180
RDRTE K SVQS +ES REYRED R DG+ R GNG EDG++R ELKTE
Sbjct: 121 RDRTEDKPALSVQSDRESGREYREDARADGK----RNGNGGFEGVIGEDGKRRSDELKTE 180
Query: 181 VEDKPSGRVEMVVESSDREKSSVAVENRIKKNKKKSEE---------------------- 240
VE KPS RVEM VESSD KSSVAVE+R KK+KKKSEE
Sbjct: 181 VERKPSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSR 240
Query: 241 ---------------------------------------------------------KNN 300
KNN
Sbjct: 241 ISDNNGEIEAAAGDLVENNVARGKDRKKDKKNVGDERDKVRSEGRRRRDVEAEETADKNN 300
Query: 301 DGGEDLVELPTKKKKKKKKKKREEDADDLLNNSGGAIEKEGMPVLDSKELKRKEGKKRKN 302
+DLVELPT KK KKKREEDA DL NNSGGA+E++GMPVLDSK+LKRKE KKRKN
Sbjct: 301 GDWKDLVELPT----KKNKKKREEDAGDLQNNSGGAVERKGMPVLDSKKLKRKEKKKRKN 360
BLAST of Sgr021473 vs. NCBI nr
Match:
KAG6605505.1 (hypothetical protein SDJN03_02822, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 275.0 bits (702), Expect = 7.6e-70
Identity = 201/365 (55.07%), Postives = 227/365 (62.19%), Query Frame = 0
Query: 1 MKTVTGRVVSSKPISLSKAASTLSSFLSTDNGASQALCAYLRRASASFNELKQLHKELKS 60
MKT+TG VVSSKPISLSKAASTLSSFLS DNGAS+ALCAYLRRASASFNELKQLHK+LKS
Sbjct: 1 MKTITGNVVSSKPISLSKAASTLSSFLSVDNGASKALCAYLRRASASFNELKQLHKDLKS 60
Query: 61 SRPDRKHRDHRSELFSDVEAAVDNPYRNEVNHDLSHRIEDSERKKSSVSESKSGKKGRES 120
SR DR R H E+ S +EAAVD+ SHRIE+ ER KSSV+ESKSGKK RES
Sbjct: 61 SRSDRNPRHHGFEVSSGLEAAVDS----------SHRIENGERIKSSVNESKSGKKRRES 120
Query: 121 RDRTEGKSIPSVQSGQESSREYREDERVDGETTMARGGNGNL-----EDGRKRGGELKTE 180
RDR E + DG+T MA GGNG+ EDG++R ELKTE
Sbjct: 121 RDRNENEQ--------------------DGKTAMASGGNGDFEDVVGEDGKRRSDELKTE 180
Query: 181 VEDKPSGRVEMVVESSDREKSSVAVENRIKKNKKKSEE---------------------- 240
+E+KPS RVE+ V+SSDR++S V +E + KK+KKKS++
Sbjct: 181 IEEKPSRRVEVDVKSSDRDESVVGIEKKKKKHKKKSKDGEDERDAEVGQSYGKSQTSANN 240
Query: 241 ------------------------------------KNNDGGEDLVELPT----KKKKKK 299
K+ND LVEL T KKKKKK
Sbjct: 241 GETEATEDFIENNVGRGKDRKKHKDKNNLGDENRTKKDNDDETGLVELSTKDKKKKKKKK 300
BLAST of Sgr021473 vs. NCBI nr
Match:
KAG7035443.1 (hypothetical protein SDJN02_02239, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 274.6 bits (701), Expect = 9.9e-70
Identity = 201/366 (54.92%), Postives = 227/366 (62.02%), Query Frame = 0
Query: 1 MKTVTGRVVSSKPISLSKAASTLSSFLSTDNGASQALCAYLRRASASFNELKQLHKELKS 60
MKT+TG VVSSKPISLSKAASTLSSFLS DNGAS+ALCAYLRRASASFNELKQLHK+LKS
Sbjct: 1 MKTITGNVVSSKPISLSKAASTLSSFLSVDNGASKALCAYLRRASASFNELKQLHKDLKS 60
Query: 61 SRPDRKHRDHRSELFSDVEAAVDNPYRNEVNHDLSHRIEDSERKKSSVSESKSGKKGRES 120
SR DR R H E+ S +EAAVD+ SHRIE+ ER KSSV+ESKSGKK RES
Sbjct: 61 SRSDRNPRHHGFEVSSGLEAAVDS----------SHRIENGERIKSSVNESKSGKKRRES 120
Query: 121 RDRTEGKSIPSVQSGQESSREYREDERVDGETTMARGGNGNL-----EDGRKRGGELKTE 180
RDR E + DG+T MA GGNG+ EDG++R ELKTE
Sbjct: 121 RDRNENEQ--------------------DGKTAMASGGNGDFEDVVGEDGKRRSDELKTE 180
Query: 181 VEDKPSGRVEMVVESSDREKSSVAVENRIKKNKKKSEE---------------------- 240
+E+KPS RVE+ V+SSDR++S V +E + KK+KKKS++
Sbjct: 181 IEEKPSRRVEVDVKSSDRDESVVGIEKKKKKHKKKSKDGEDERDAEVGQSYGKSQTSANN 240
Query: 241 ------------------------------------KNNDGGEDLVELPT-----KKKKK 299
K+ND LVEL T KKKKK
Sbjct: 241 GETEATEDFIENNVGRGKDRKKHKDKNNLGDEKRTKKDNDDETGLVELSTKDKKKKKKKK 300
BLAST of Sgr021473 vs. NCBI nr
Match:
XP_038902882.1 (probable xyloglucan galactosyltransferase GT11 [Benincasa hispida])
HSP 1 Score: 273.1 bits (697), Expect = 2.9e-69
Identity = 199/386 (51.55%), Postives = 234/386 (60.62%), Query Frame = 0
Query: 1 MKTVTGRVVSSKPISLSKAASTLSSFLSTDNGASQALCAYLRRASASFNELKQLHKELKS 60
MKTVTG VVSSKPIS+SKAASTLSSFLS DNGASQALCAYLRRASASFNELKQLHKELKS
Sbjct: 1 MKTVTGSVVSSKPISISKAASTLSSFLSVDNGASQALCAYLRRASASFNELKQLHKELKS 60
Query: 61 SRPDRKHRDHRSELFSDVEAAVDNPYRNEVNHDLSHRIEDSERKKSSVSESKSGKKGRES 120
SR RKH H SE+ +++EAA+DN S+R+ED E+KKSSVSE KK ES
Sbjct: 61 SRSVRKHLHHGSEVSNELEAALDN----------SYRVEDGEKKKSSVSER---KKRPES 120
Query: 121 RDRTEGKSIPSVQSGQESSREYREDERVDGETTMARGGNGNL-----EDGRKRGGELKTE 180
R++ S+R EDER+ +TTM GGNG L EDG+++GGELK E
Sbjct: 121 RNK-------------PSARVQSEDERI-WKTTMENGGNGKLEDVLGEDGKRKGGELKIE 180
Query: 181 VEDKPSGRVEMVVESSDREKSSVAVENRIKKNKKKSEE---------------------- 240
+EDKP+ +VEM VESSDR+K VAVE + KK+KKK+E+
Sbjct: 181 IEDKPNRKVEMDVESSDRDKGVVAVEKKRKKHKKKNEDKHGNIEDDERDSGARLSHNKSQ 240
Query: 241 ----------------------------------------------------------KN 300
K+
Sbjct: 241 NSDNNGNIEASGEFVENNVAREKVEKKHEDKKSLGDEKDQVKTEVQRRRDIEEEKGINKD 300
Query: 301 NDGGEDLVELPTKKKKKKKKKKREEDADDLLNNSGGAIEKEGMPVLDSKELKRKEGKKRK 302
ND G D+V+L TKKKKKKKKKKREED DD NNSGGA+ + MPV +SKELKRK+ KKRK
Sbjct: 301 NDDGTDIVDLSTKKKKKKKKKKREEDVDDFQNNSGGAMVNDEMPVSNSKELKRKDRKKRK 359
BLAST of Sgr021473 vs. NCBI nr
Match:
XP_022947113.1 (DEAD-box ATP-dependent RNA helicase 42-like isoform X1 [Cucurbita moschata] >XP_022947114.1 DEAD-box ATP-dependent RNA helicase 42-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 272.3 bits (695), Expect = 4.9e-69
Identity = 199/363 (54.82%), Postives = 225/363 (61.98%), Query Frame = 0
Query: 1 MKTVTGRVVSSKPISLSKAASTLSSFLSTDNGASQALCAYLRRASASFNELKQLHKELKS 60
MKT+TG VVSSKPISLSKAASTLSSFLS DNGAS+ALCAYLRRASASFNELKQLHK+LKS
Sbjct: 1 MKTITGNVVSSKPISLSKAASTLSSFLSVDNGASKALCAYLRRASASFNELKQLHKDLKS 60
Query: 61 SRPDRKHRDHRSELFSDVEAAVDNPYRNEVNHDLSHRIEDSERKKSSVSESKSGKKGRES 120
SR DR R H E+ S +EAAVD+ SHRIE+ ER KSSV+ESKSGKK RES
Sbjct: 61 SRSDRNPRHHGFEVSSGLEAAVDS----------SHRIENGERIKSSVNESKSGKKRRES 120
Query: 121 RDRTEGKSIPSVQSGQESSREYREDERVDGETTMARGGNGNL-----EDGRKRGGELKTE 180
RDR E + DG+T MA GGNG+ EDG++R ELKTE
Sbjct: 121 RDRNENEQ--------------------DGKTAMASGGNGDFEDVVGEDGKRRSDELKTE 180
Query: 181 VEDKPSGRVEMVVESSDREKSSVAVENRIKKNKKKSEE---------------------- 240
+E+KPS RVE+ V+SSDR++S V +E + KK+KKKS++
Sbjct: 181 IEEKPSRRVEVDVKSSDRDESVVGIEKKKKKHKKKSKDGEDERDAEVGQSYGKSQTSANN 240
Query: 241 ------------------------------------KNNDGGEDLVELPT--KKKKKKKK 299
K+ND LVEL T KKKKKKKK
Sbjct: 241 GETEATEDFIENNVGRGKDRKKHKDKNNLGDEKRTKKDNDDETGLVELSTKDKKKKKKKK 300
BLAST of Sgr021473 vs. ExPASy TrEMBL
Match:
A0A6J1CXN0 (nuclear speckle splicing regulatory protein 1 OS=Momordica charantia OX=3673 GN=LOC111015519 PE=4 SV=1)
HSP 1 Score: 335.1 bits (858), Expect = 3.0e-88
Identity = 229/385 (59.48%), Postives = 250/385 (64.94%), Query Frame = 0
Query: 1 MKTVTGRVVSSKPISLSKAASTLSSFLSTDNGASQALCAYLRRASASFNELKQLHKELKS 60
MKTVTGRV+SSKPISLSKAASTLSSFLSTDNGAS A CAYLRRASASFNELKQLHKELKS
Sbjct: 1 MKTVTGRVISSKPISLSKAASTLSSFLSTDNGASPAFCAYLRRASASFNELKQLHKELKS 60
Query: 61 SRPDRKHRDHRSELFSDVEAAVDNPYRNEVNHDLSHRIEDSERKKSSVSESKSGKKGRES 120
SR DRKHR HRSE+FS +E AVD YR+E +H ++HRIE E+K SSVSESKSGKK R+S
Sbjct: 61 SRSDRKHRHHRSEVFSGLEVAVDETYRSEASHGINHRIEGGEKKNSSVSESKSGKKRRDS 120
Query: 121 RDRTEGKSIPSVQSGQESSREYREDERVDGETTMARGGNGNL-----EDGRKRGGELKTE 180
RDRTE K SVQS +ES REYRED R DG+ R GNG EDG++R ELKTE
Sbjct: 121 RDRTEDKPALSVQSDRESGREYREDARADGK----RNGNGGFEGVIGEDGKRRSDELKTE 180
Query: 181 VEDKPSGRVEMVVESSDREKSSVAVENRIKKNKKKSEE---------------------- 240
VE KPS RVEM VESSD KSSVAVE+R KK+KKKSEE
Sbjct: 181 VERKPSRRVEMDVESSDGVKSSVAVESRRKKHKKKSEEEHGKTGDDERDAGARQSYSKSR 240
Query: 241 ---------------------------------------------------------KNN 300
KNN
Sbjct: 241 ISDNNGEIEAAAGDLVENNVARGKDRKKDKKNVGDERDKVRSEGRRRRDVEAEETADKNN 300
Query: 301 DGGEDLVELPTKKKKKKKKKKREEDADDLLNNSGGAIEKEGMPVLDSKELKRKEGKKRKN 302
+DLVELPT KK KKKREEDA DL NNSGGA+E++GMPVLDSK+LKRKE KKRKN
Sbjct: 301 GDWKDLVELPT----KKNKKKREEDAGDLQNNSGGAVERKGMPVLDSKKLKRKEKKKRKN 360
BLAST of Sgr021473 vs. ExPASy TrEMBL
Match:
A0A6J1G5Q5 (DEAD-box ATP-dependent RNA helicase 42-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451081 PE=4 SV=1)
HSP 1 Score: 272.3 bits (695), Expect = 2.4e-69
Identity = 199/363 (54.82%), Postives = 225/363 (61.98%), Query Frame = 0
Query: 1 MKTVTGRVVSSKPISLSKAASTLSSFLSTDNGASQALCAYLRRASASFNELKQLHKELKS 60
MKT+TG VVSSKPISLSKAASTLSSFLS DNGAS+ALCAYLRRASASFNELKQLHK+LKS
Sbjct: 1 MKTITGNVVSSKPISLSKAASTLSSFLSVDNGASKALCAYLRRASASFNELKQLHKDLKS 60
Query: 61 SRPDRKHRDHRSELFSDVEAAVDNPYRNEVNHDLSHRIEDSERKKSSVSESKSGKKGRES 120
SR DR R H E+ S +EAAVD+ SHRIE+ ER KSSV+ESKSGKK RES
Sbjct: 61 SRSDRNPRHHGFEVSSGLEAAVDS----------SHRIENGERIKSSVNESKSGKKRRES 120
Query: 121 RDRTEGKSIPSVQSGQESSREYREDERVDGETTMARGGNGNL-----EDGRKRGGELKTE 180
RDR E + DG+T MA GGNG+ EDG++R ELKTE
Sbjct: 121 RDRNENEQ--------------------DGKTAMASGGNGDFEDVVGEDGKRRSDELKTE 180
Query: 181 VEDKPSGRVEMVVESSDREKSSVAVENRIKKNKKKSEE---------------------- 240
+E+KPS RVE+ V+SSDR++S V +E + KK+KKKS++
Sbjct: 181 IEEKPSRRVEVDVKSSDRDESVVGIEKKKKKHKKKSKDGEDERDAEVGQSYGKSQTSANN 240
Query: 241 ------------------------------------KNNDGGEDLVELPT--KKKKKKKK 299
K+ND LVEL T KKKKKKKK
Sbjct: 241 GETEATEDFIENNVGRGKDRKKHKDKNNLGDEKRTKKDNDDETGLVELSTKDKKKKKKKK 300
BLAST of Sgr021473 vs. ExPASy TrEMBL
Match:
A0A6J1G5Y0 (sarcoplasmic reticulum histidine-rich calcium-binding protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451081 PE=4 SV=1)
HSP 1 Score: 245.7 bits (626), Expect = 2.4e-61
Identity = 189/363 (52.07%), Postives = 214/363 (58.95%), Query Frame = 0
Query: 1 MKTVTGRVVSSKPISLSKAASTLSSFLSTDNGASQALCAYLRRASASFNELKQLHKELKS 60
MKT+TG VVSSKPISLSKAASTLSSFLS DNGAS+ALCAYLRRASASFNELKQLHK+LKS
Sbjct: 1 MKTITGNVVSSKPISLSKAASTLSSFLSVDNGASKALCAYLRRASASFNELKQLHKDLKS 60
Query: 61 SRPDRKHRDHRSELFSDVEAAVDNPYRNEVNHDLSHRIEDSERKKSSVSESKSGKKGRES 120
SR DR R H E+ S +EAAVD+ SHRIE+ ER KSSV+ESKSGKK RES
Sbjct: 61 SRSDRNPRHHGFEVSSGLEAAVDS----------SHRIENGERIKSSVNESKSGKKRRES 120
Query: 121 RDRTEGKSIPSVQSGQESSREYREDERVDGETTMARGGNGNL-----EDGRKRGGELKTE 180
RDR E + DG+T MA GGNG+ EDG++R ELKTE
Sbjct: 121 RDRNENEQ--------------------DGKTAMASGGNGDFEDVVGEDGKRRSDELKTE 180
Query: 181 VEDKPSGRVEMVVESSDREKSSVAVENRIKKNKKKSEE---------------------- 240
+E+KPS RVE+ V+SSDR++S V +E + KK+KKKS++
Sbjct: 181 IEEKPSRRVEVDVKSSDRDESVVGIEKKKKKHKKKSKDGEDERDAEVGQSYGKSQTSANN 240
Query: 241 ------------------------------------KNNDGGEDLVELPT--KKKKKKKK 299
K+ND LVEL T KKKKKKKK
Sbjct: 241 GETEATEDFIENNVGRGKDRKKHKDKNNLGDEKRTKKDNDDETGLVELSTKDKKKKKKKK 300
BLAST of Sgr021473 vs. ExPASy TrEMBL
Match:
A0A6J1JCJ7 (cylicin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111484496 PE=4 SV=1)
HSP 1 Score: 238.8 bits (608), Expect = 2.9e-59
Identity = 187/384 (48.70%), Postives = 212/384 (55.21%), Query Frame = 0
Query: 1 MKTVTGRVVSSKPISLSKAASTLSSFLSTDNGASQALCAYLRRASASFNELKQLHKELKS 60
MKTVTG +VSSKPIS+SKAASTLSSFLS DNGAS+A+CAYLRRASASFNELKQLHKELKS
Sbjct: 1 MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
Query: 61 SRPDRKHRDHRSELFSDVEAAVDNPYRNEVNHDLSHRIEDSERKKSSVSESKSGKKGRES 120
SR DRKHR H SE +D EAA DNP IED E+K +K GK G+ S
Sbjct: 61 SRSDRKHRHHGSEASNDPEAARDNP----------QWIEDGEKKNPLYLRAKDGKSGKTS 120
Query: 121 RDRTEGKSIPSVQSGQESSREYREDERVDGETTMARGGNGNLEDG----RKRGGE-LKTE 180
+VQS DG+ GGNG+ ED RKR E LKTE
Sbjct: 121 L---------NVQS-------------EDGKAEKESGGNGDFEDASGEYRKRKVEDLKTE 180
Query: 181 VEDKPSGRVEMVVESSDREKSSVAVENRIKKNKKKSEEK--------------------- 240
+EDKP+ +VEM VESSD++KS VAVE + KK++KKSE++
Sbjct: 181 IEDKPNRKVEMDVESSDKDKSVVAVEKKGKKHQKKSEDRYAKIEDDEHKAGARRSSSKSR 240
Query: 241 ---------------------------------------------------------NND 300
N D
Sbjct: 241 NSDNNGEIEASAKFVENNIASGKDRKKHVDKKSLGDDKDQVKSEGHRRRDAEEEKSTNKD 300
Query: 301 GGEDLVELPTKKKKKKKKKKREEDADDLLNNSGGAIEKEGMPVLDSKELKRKEGKKRKNR 302
+ KKKKKKKKK REE+ DD NNSGGA+ KE +PVLD KELKRKE KKRKNR
Sbjct: 301 NDDGTESSKKKKKKKKKKKNREEEDDDFQNNSGGALVKEEIPVLDDKELKRKEKKKRKNR 351
BLAST of Sgr021473 vs. ExPASy TrEMBL
Match:
A0A6J1FSX8 (glutamic acid-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448174 PE=4 SV=1)
HSP 1 Score: 238.4 bits (607), Expect = 3.8e-59
Identity = 182/383 (47.52%), Postives = 216/383 (56.40%), Query Frame = 0
Query: 1 MKTVTGRVVSSKPISLSKAASTLSSFLSTDNGASQALCAYLRRASASFNELKQLHKELKS 60
MKTVTG +VSSKPIS+SKAASTLSSFLS DNGAS+A+CAYLRRASASFNELKQLHKELKS
Sbjct: 1 MKTVTGSIVSSKPISISKAASTLSSFLSVDNGASKAICAYLRRASASFNELKQLHKELKS 60
Query: 61 SRPDRKHRDHRSELFSDVEAAVDNPYRNEVNHDLSHRIEDSERKKSSVSESKSGKKGRES 120
SR DRKHR H SE +D EA+ NP H IED E+K +K G+ G+ S
Sbjct: 61 SRSDRKHRHHGSEASNDPEASRGNP----------HWIEDDEKKNPLYLRAKDGRSGKPS 120
Query: 121 RDRTEGKSIPSVQSGQESSREYREDERVDGETTMARGGNGNLEDG-----RKRGGELKTE 180
+VQS ++ DG+T GG+G+ ED +++ G+LKTE
Sbjct: 121 F---------NVQS----------EDGKDGKTEKESGGSGDFEDASGEYRKRKVGDLKTE 180
Query: 181 VEDKPSGRVEMVVESSDREKSSVAVENRIKKNKKKSEEKN-------------------- 240
+EDKP+ +VEM VESSD++KS VAVE + KK+KKKSE+++
Sbjct: 181 IEDKPNRKVEMDVESSDKDKSVVAVEKKGKKHKKKSEDRHAKIEDDEREDGARRSYSKSR 240
Query: 241 ---------------------------------------------------------NDG 300
N
Sbjct: 241 NSDNNGEIEASGKFVENNIASGKDRKKHEDKKSLGDDKDQVKSEGQRRRDAEEEKSTNKD 300
Query: 301 GEDLVELPTKKKKKKKKKKREEDADDLLNNSGGAIEKEGMPVLDSKELKRKEGKKRKNRD 302
+D E KKKKKKKKK REE+ DD NNSGGA+ KE +PV D KELKRKE KKRKNR
Sbjct: 301 NDDGTESTKKKKKKKKKKNREEEDDDFQNNSGGAMVKEEIPVSDDKELKRKEKKKRKNRG 353
BLAST of Sgr021473 vs. TAIR 10
Match:
AT5G60030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75335.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 80.5 bits (197), Expect = 2.6e-15
Identity = 105/309 (33.98%), Postives = 154/309 (49.84%), Query Frame = 0
Query: 1 MKTVTGRVVSSKPISLSKAASTLSSFLSTDNGASQALCAYLRRASASFNELKQLHKELKS 60
MKTVTGRVVS++PISLSKAA LS F S+DNGASQ + AYLRRASA+F ELK H+E+KS
Sbjct: 1 MKTVTGRVVSAEPISLSKAAKLLSGFASSDNGASQDVSAYLRRASAAFTELKSFHREIKS 60
Query: 61 SR----PDRKHRDHRSELFSDVEAAVDNPYRNEVNHDLSHRIEDSERKKSSVSESKSGKK 120
DR+ + ++ SD ++ RN ++ +I R ++S + S
Sbjct: 61 KETKPSSDRETKSTETKQSSDAKSE-----RNVIDEFDGRKI----RYRNSEAVSVESVY 120
Query: 121 GRESRDRTEGKSIPSVQSGQESSREYREDERVDGETTMARGGNGNLEDGRKRGGELKTEV 180
GRE RD + K E E E E+ E+ R+R E K +
Sbjct: 121 GRE-RDEKKMKKSKDADVVDEKVNEKLEAEQ-------------RSEERRERKKEKKKKK 180
Query: 181 EDKPSGRVEMVVES--SDREKSSVAVENRIKKNKKKSEEKNNDGGEDLVELPTKKKKKKK 240
+K V+ V+ D +KS+ E + KK+KK ++E D E L + + K+K
Sbjct: 181 NNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIKEK 240
Query: 241 KKKREEDADDLLNNSGGAIEKEGMPVLDSKELKRKE-----GKKRKNRDLEEKGGDDGSE 299
KK ++ED D E+ K+ KRK ++RK++ + + GSE
Sbjct: 241 KKNKDEDVVDEKEKEKLEDEQRSGERKKEKKKKRKSDEEIVSEERKSKKKRKSDEEMGSE 286
BLAST of Sgr021473 vs. TAIR 10
Match:
AT1G75335.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 77.0 bits (188), Expect = 2.8e-14
Identity = 45/75 (60.00%), Postives = 57/75 (76.00%), Query Frame = 0
Query: 1 MKTVTGRVVSSKPISLSKAASTLSSFLSTDNGASQALCAYLRRASASFNELKQLHKELKS 60
MKTVTGRV S+KPISLSKAA+ LS F+S++NGASQ + AYLRRAS +F ELK +H+E+KS
Sbjct: 1 MKTVTGRVNSAKPISLSKAATLLSGFVSSENGASQDVSAYLRRASGAFIELKSIHREIKS 60
Query: 61 SR----PDRKHRDHR 72
+K + HR
Sbjct: 61 KETKLSSKKKRKSHR 75
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022146269.1 | 6.2e-88 | 59.48 | nuclear speckle splicing regulatory protein 1 [Momordica charantia] | [more] |
KAG6605505.1 | 7.6e-70 | 55.07 | hypothetical protein SDJN03_02822, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7035443.1 | 9.9e-70 | 54.92 | hypothetical protein SDJN02_02239, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_038902882.1 | 2.9e-69 | 51.55 | probable xyloglucan galactosyltransferase GT11 [Benincasa hispida] | [more] |
XP_022947113.1 | 4.9e-69 | 54.82 | DEAD-box ATP-dependent RNA helicase 42-like isoform X1 [Cucurbita moschata] >XP_... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CXN0 | 3.0e-88 | 59.48 | nuclear speckle splicing regulatory protein 1 OS=Momordica charantia OX=3673 GN=... | [more] |
A0A6J1G5Q5 | 2.4e-69 | 54.82 | DEAD-box ATP-dependent RNA helicase 42-like isoform X1 OS=Cucurbita moschata OX=... | [more] |
A0A6J1G5Y0 | 2.4e-61 | 52.07 | sarcoplasmic reticulum histidine-rich calcium-binding protein-like isoform X2 OS... | [more] |
A0A6J1JCJ7 | 2.9e-59 | 48.70 | cylicin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111484496 PE=4 SV=1 | [more] |
A0A6J1FSX8 | 3.8e-59 | 47.52 | glutamic acid-rich protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448174 PE... | [more] |
Match Name | E-value | Identity | Description | |
AT5G60030.1 | 2.6e-15 | 33.98 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G75335.1 | 2.8e-14 | 60.00 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |