Sgr021472 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr021472
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	chitinase 2-like
Location	tig00153704: 316037 .. 316351 (+)
RNA-Seq Expression	Sgr021472
Synteny	Sgr021472

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGTTCCACTTCATTCTCTCCTTTGCCACTGATTCTCCGGGCGACCAACAGCAAATTCAGAGTCTTTCGGGATAAACAAAACATCTCACCTTCTTCTTTTTCTTCCATCAAGGCCCAGCATTCAAACATCAAGTTCGCCCTCAGTCTCAGGGGTGATACAGTAGGCAAACAATCTGCATACTTCAAACCCAAATCCGTTACATCTTCGGTTAAAAATTCTTTCAAGTCTATATCTCGCATAGTGAGGGTGTATGATCTGAATAGGGTTGACATCGATTATGAACACTTCAAAGCAGACCACATTTACTGA

mRNA sequence

ATGTTGAGTTCCACTTCATTCTCTCCTTTGCCACTGATTCTCCGGGCGACCAACAGCAAATTCAGAGTCTTTCGGGATAAACAAAACATCTCACCTTCTTCTTTTTCTTCCATCAAGGCCCAGCATTCAAACATCAAGTTCGCCCTCAGTCTCAGGGGTGATACAGTAGGCAAACAATCTGCATACTTCAAACCCAAATCCGTTACATCTTCGGTTAAAAATTCTTTCAAGTCTATATCTCGCATAGTGAGGGTGTATGATCTGAATAGGGTTGACATCGATTATGAACACTTCAAAGCAGACCACATTTACTGA

Coding sequence (CDS)

ATGTTGAGTTCCACTTCATTCTCTCCTTTGCCACTGATTCTCCGGGCGACCAACAGCAAATTCAGAGTCTTTCGGGATAAACAAAACATCTCACCTTCTTCTTTTTCTTCCATCAAGGCCCAGCATTCAAACATCAAGTTCGCCCTCAGTCTCAGGGGTGATACAGTAGGCAAACAATCTGCATACTTCAAACCCAAATCCGTTACATCTTCGGTTAAAAATTCTTTCAAGTCTATATCTCGCATAGTGAGGGTGTATGATCTGAATAGGGTTGACATCGATTATGAACACTTCAAAGCAGACCACATTTACTGA

Protein sequence

MLSSTSFSPLPLILRATNSKFRVFRDKQNISPSSFSSIKAQHSNIKFALSLRGDTVGKQSAYFKPKSVTSSVKNSFKSISRIVRVYDLNRVDIDYEHFKADHIY

Homology

[Close]

BLAST of Sgr021472 vs. NCBI nr
Match: XP_022986910.1 (chitinase 2-like [Cucurbita maxima])

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-27
Identity = 69/85 (81.18%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 16  ATNSKFRVFRDKQNISPSSFSSIKAQHSNIKFALSLRGDTVGKQSAYFKPKSVTSSVKNS 75
           ATN KFRVF D Q +SPSS SSIKAQHSNIKFALSL GDTVGKQ AYFKPKS+TS VKN+
Sbjct: 76  ATNEKFRVFWDDQILSPSSVSSIKAQHSNIKFALSLGGDTVGKQFAYFKPKSITSWVKNA 135

Query: 76  FKSISRIVRVYDLNRVDIDYEHFKA 101
           F+SISRIV+ YDL+ VDIDYEHFKA
Sbjct: 136 FESISRIVKEYDLDGVDIDYEHFKA 160

[Close]

BLAST of Sgr021472 vs. NCBI nr
Match: XP_022146270.1 (chitinase 2-like [Momordica charantia])

HSP 1 Score: 132.1 bits (331), Expect = 2.8e-27
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 16  ATNSKFRVFRDKQNISPSSFSSIKAQHSNIKFALSLRGDTVGKQSAYFKPKSVTSSVKNS 75
           ATN KFRVF D+QN+SPSS SSIKA+HSNIKFA+SL GDTVGK+ AYFKPKSV S VKN+
Sbjct: 92  ATNGKFRVFWDEQNLSPSSVSSIKARHSNIKFAVSLGGDTVGKEFAYFKPKSVKSWVKNA 151

Query: 76  FKSISRIVRVYDLNRVDIDYEHFKAD 102
           FKSISRIV+ Y L+ VDIDYEHFKAD
Sbjct: 152 FKSISRIVKEYHLDGVDIDYEHFKAD 177

[Close]

BLAST of Sgr021472 vs. NCBI nr
Match: KAG7010590.1 (hypothetical protein SDJN02_27384, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 131.3 bits (329), Expect = 4.7e-27
Identity = 67/85 (78.82%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 16  ATNSKFRVFRDKQNISPSSFSSIKAQHSNIKFALSLRGDTVGKQSAYFKPKSVTSSVKNS 75
           ATN KFRVF D+Q +SPSS SSIKAQHSN+KFALSL GDT GKQ AYFKPKS+TS VKN+
Sbjct: 71  ATNGKFRVFWDEQILSPSSVSSIKAQHSNVKFALSLGGDTAGKQFAYFKPKSITSWVKNA 130

Query: 76  FKSISRIVRVYDLNRVDIDYEHFKA 101
           F+SISRIV+ YDL+ VDIDYEHFKA
Sbjct: 131 FESISRIVKEYDLDGVDIDYEHFKA 155

[Close]

BLAST of Sgr021472 vs. NCBI nr
Match: KAG6570744.1 (hypothetical protein SDJN03_29659, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 131.3 bits (329), Expect = 4.7e-27
Identity = 67/85 (78.82%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 16  ATNSKFRVFRDKQNISPSSFSSIKAQHSNIKFALSLRGDTVGKQSAYFKPKSVTSSVKNS 75
           ATN KFRVF D+Q +SPSS SSIKAQHSN+KFALSL GDT GKQ AYFKPKS+TS VKN+
Sbjct: 76  ATNGKFRVFWDEQILSPSSVSSIKAQHSNVKFALSLGGDTAGKQFAYFKPKSITSWVKNA 135

Query: 76  FKSISRIVRVYDLNRVDIDYEHFKA 101
           F+SISRIV+ YDL+ VDIDYEHFKA
Sbjct: 136 FESISRIVKEYDLDGVDIDYEHFKA 160

[Close]

BLAST of Sgr021472 vs. NCBI nr
Match: XP_038902883.1 (chitinase 2-like [Benincasa hispida])

HSP 1 Score: 130.6 bits (327), Expect = 8.0e-27
Identity = 65/85 (76.47%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 16  ATNSKFRVFRDKQNISPSSFSSIKAQHSNIKFALSLRGDTVGKQSAYFKPKSVTSSVKNS 75
           ATN KFRVF D++N+SPSS SSIKA+HSN+KFALSL GDTVGK+ A+FKPKS+TS V N+
Sbjct: 72  ATNGKFRVFWDEENLSPSSVSSIKAKHSNVKFALSLGGDTVGKEFAFFKPKSITSWVNNA 131

Query: 76  FKSISRIVRVYDLNRVDIDYEHFKA 101
           FKSISRIV+ YDL+ VDIDYEHFKA
Sbjct: 132 FKSISRIVKKYDLDGVDIDYEHFKA 156

[Close]

BLAST of Sgr021472 vs. ExPASy Swiss-Prot
Match: Q9SLP4 (Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.4e-18
Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 0


Query: 8   SPLPLILRATNSKFRVFRDKQNISPSSFSSIKAQHSNIKFALSLRGDTVGKQSAYFKPKS 67
           SP P     TN  F+ F D  N+SPS  +++K  HSN+K +LSL GD+VG ++ +F P S
Sbjct: 68  SPTP-----TNGNFKPFWDTNNLSPSQVAAVKRTHSNVKVSLSLGGDSVGGKNVFFSPSS 127

Query: 68  VTSSVKNSFKSISRIVRVYDLNRVDIDYEHFKAD 102
           V+S V+N+  S++RI++ Y L+ +DIDYEHFK D
Sbjct: 128 VSSWVENAVSSLTRIIKQYHLDGIDIDYEHFKGD 156

[Close]

BLAST of Sgr021472 vs. ExPASy Swiss-Prot
Match: Q7M443 (Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-15
Identity = 41/94 (43.62%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 8   SPLPLILRATNSKFRVFRDKQNISPSSFSSIKAQHSNIKFALSLRGDTVGKQSAYFKPKS 67
           SP P     TN  F  F D  N+SPS  ++IK  ++N+K ++SL G++VG +  +F P S
Sbjct: 42  SPTP-----TNGNFNPFWDTNNLSPSQVAAIKRTYNNVKVSVSLGGNSVGGERVFFNPSS 101

Query: 68  VTSSVKNSFKSISRIVRVYDLNRVDIDYEHFKAD 102
           V+S V N+  S+++I++ Y L+ +DIDYEHFK D
Sbjct: 102 VSSWVDNAVSSLTKIIKQYHLDGIDIDYEHFKGD 130

[Close]

BLAST of Sgr021472 vs. ExPASy TrEMBL
Match: A0A6J1JFC6 (chitinase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111484508 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.0e-27
Identity = 69/85 (81.18%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 16  ATNSKFRVFRDKQNISPSSFSSIKAQHSNIKFALSLRGDTVGKQSAYFKPKSVTSSVKNS 75
           ATN KFRVF D Q +SPSS SSIKAQHSNIKFALSL GDTVGKQ AYFKPKS+TS VKN+
Sbjct: 76  ATNEKFRVFWDDQILSPSSVSSIKAQHSNIKFALSLGGDTVGKQFAYFKPKSITSWVKNA 135

Query: 76  FKSISRIVRVYDLNRVDIDYEHFKA 101
           F+SISRIV+ YDL+ VDIDYEHFKA
Sbjct: 136 FESISRIVKEYDLDGVDIDYEHFKA 160

[Close]

BLAST of Sgr021472 vs. ExPASy TrEMBL
Match: A0A6J1CWU0 (chitinase 2-like OS=Momordica charantia OX=3673 GN=LOC111015520 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 16  ATNSKFRVFRDKQNISPSSFSSIKAQHSNIKFALSLRGDTVGKQSAYFKPKSVTSSVKNS 75
           ATN KFRVF D+QN+SPSS SSIKA+HSNIKFA+SL GDTVGK+ AYFKPKSV S VKN+
Sbjct: 92  ATNGKFRVFWDEQNLSPSSVSSIKARHSNIKFAVSLGGDTVGKEFAYFKPKSVKSWVKNA 151

Query: 76  FKSISRIVRVYDLNRVDIDYEHFKAD 102
           FKSISRIV+ Y L+ VDIDYEHFKAD
Sbjct: 152 FKSISRIVKEYHLDGVDIDYEHFKAD 177

[Close]

BLAST of Sgr021472 vs. ExPASy TrEMBL
Match: A0A6J1FUT9 (chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111448631 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.9e-27
Identity = 66/85 (77.65%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 16  ATNSKFRVFRDKQNISPSSFSSIKAQHSNIKFALSLRGDTVGKQSAYFKPKSVTSSVKNS 75
           ATN KFRVF D+Q +SPSS SSIKAQHSN+KFALSL GDT GKQ AYFKPKS+TS VKN+
Sbjct: 93  ATNGKFRVFWDEQILSPSSVSSIKAQHSNVKFALSLGGDTAGKQFAYFKPKSITSWVKNA 152

Query: 76  FKSISRIVRVYDLNRVDIDYEHFKA 101
           F+SISRIV+ YD++ VDIDYEHFKA
Sbjct: 153 FESISRIVKEYDIDGVDIDYEHFKA 177

[Close]

BLAST of Sgr021472 vs. ExPASy TrEMBL
Match: A0A5D3CQZ2 (Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00970 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.2e-22
Identity = 63/96 (65.62%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 6   SFSPLPLILRATNSKFRVFRDKQNISPSSFSSIKAQHSNIKFALSLRGDTVGKQ-SAYFK 65
           S SP P     TN KF+VF D++N++PSS SSIKA+HSN+KFALSL GDTVG     +FK
Sbjct: 70  SSSPSP-----TNGKFKVFWDEKNLTPSSISSIKAKHSNVKFALSLGGDTVGDGIFVFFK 129

Query: 66  PKSVTSSVKNSFKSISRIVRVYDLNRVDIDYEHFKA 101
           PKS+TS V N+FKSIS IV+ YDL+ VDIDYEHFKA
Sbjct: 130 PKSITSWVNNAFKSISDIVKEYDLDGVDIDYEHFKA 160

[Close]

BLAST of Sgr021472 vs. ExPASy TrEMBL
Match: A0A1S3CLR6 (chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103501894 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.2e-22
Identity = 63/96 (65.62%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 6   SFSPLPLILRATNSKFRVFRDKQNISPSSFSSIKAQHSNIKFALSLRGDTVGKQ-SAYFK 65
           S SP P     TN KF+VF D++N++PSS SSIKA+HSN+KFALSL GDTVG     +FK
Sbjct: 88  SSSPSP-----TNGKFKVFWDEKNLTPSSISSIKAKHSNVKFALSLGGDTVGDGIFVFFK 147

Query: 66  PKSVTSSVKNSFKSISRIVRVYDLNRVDIDYEHFKA 101
           PKS+TS V N+FKSIS IV+ YDL+ VDIDYEHFKA
Sbjct: 148 PKSITSWVNNAFKSISDIVKEYDLDGVDIDYEHFKA 178

The following BLAST results are available for this feature:

BLAST of Sgr021472 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986910.1	2.1e-27	81.18	chitinase 2-like [Cucurbita maxima]	[more]
XP_022146270.1	2.8e-27	79.07	chitinase 2-like [Momordica charantia]	[more]
KAG7010590.1	4.7e-27	78.82	hypothetical protein SDJN02_27384, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6570744.1	4.7e-27	78.82	hypothetical protein SDJN03_29659, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038902883.1	8.0e-27	76.47	chitinase 2-like [Benincasa hispida]	[more]

BLAST of Sgr021472 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLP4	2.4e-18	47.87	Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]
Q7M443	1.5e-15	43.62	Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]

BLAST of Sgr021472 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JFC6	1.0e-27	81.18	chitinase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111484508 PE=3 SV=1	[more]
A0A6J1CWU0	1.3e-27	79.07	chitinase 2-like OS=Momordica charantia OX=3673 GN=LOC111015520 PE=3 SV=1	[more]
A0A6J1FUT9	3.9e-27	77.65	chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111448631 PE=3 SV=1	[more]
A0A5D3CQZ2	2.2e-22	65.63	Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G0097...	[more]
A0A1S3CLR6	2.2e-22	65.63	chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103501894 PE=3 SV=1	[more]

BLAST of Sgr021472 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 5..104 e-value: 2.5E-15 score: 58.6
None	No IPR available	PANTHER	PTHR46476:SF3	CHITINASE 2	coord: 16..101
None	No IPR available	PANTHER	PTHR46476	CHITINASE 2-LIKE	coord: 16..101
IPR001223	Glycoside hydrolase family 18, catalytic domain	PFAM	PF00704	Glyco_hydro_18	coord: 33..96 e-value: 4.3E-7 score: 30.0
IPR001223	Glycoside hydrolase family 18, catalytic domain	PROSITE	PS51910	GH18_2	coord: 1..104 score: 10.695162
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 17..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr021472.1	Sgr021472.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds