Sgr020837 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr020837
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Origin recognition complex subunit 1
Location	tig00153574: 461837 .. 463567 (+)
RNA-Seq Expression	Sgr020837
Synteny	Sgr020837

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGCGTCATTACCCAAGTCTCTACCTCGTAGGAATAAGTGAATGAAAACTTGACAAATCTTCTTCTTGATGGGTAACTTTTCTTTCTTTTGACAAAACATATCTGTTAATCTAGAGAAATAGAGGAGATAACTACATTTATAGAAAATGCTATCTGTGATGACCAAAGTTTGGGCCGATGCTTGTGTACACCCATGGTGTTCCAGGAACAGGCAAGGTAGTCTGTACTTCCTTTAGCCAGCGACGAATCTAGACTATGAGTGTGCTACCAGTAATGAGGAATCTGCAGGCCTAAGTTGATGCAGGAAATGTAAGACCTCATTGCTTTGTGGAGGTTAATGGTCTATAGCTGGCATCACCAGAAAATATATACAGGGTAATAATGGTATTGACTTGACTTGATTGCAACATTTCAGGGTTAGGCCTGTGAAGGTGGCACTCTTGTTTCATTACTCAGATTTTTTTATCAAGTTAGATATAAACATTTGGTGTACTCAATCCACTGTTAACTATATTTCTCTTGTTACTATAGGTATTATGAAGAAACGAAGCATAGCACATTGCATTCTTCAAGGTCAACTGCTCTGGTGGAATGGTAAGTGATTTATTAATTCATTTACTCTATTTTTCTTCTTAGCGAACTTTCAATCTTCCTTTAATCATCACCTTCCAAAGAAAATTTCCATTTATTATCCGGGACTTGTAGAATACTGGCTTCTGTTGGATGGTAATGAAGAGTTGGGAGAAGTTTTATGATTAATTTGCATGTTTAGTATTTTCAAGTTATTCAGGAGGCTTTCTTCCTAATAGTTTTAATAGAATGTGTTTCTTAGAAGAAGGATGATAAATAAATCTTGACTAAAATATAATTTGATGCAGAACTAGTGAACATTGTTGTTATGATAAATCCATTTCTTTTTAATTTTGAAAAGTACTTTAAATCTTCAATTTGCTTCATAAATTTGTACTACCCCTGTCTTGTCTTGTTGTGTCATTCTGGTTTGAACTCTACGGCGTGTTTGAAAACTGATTGCATATTTGAACGCTTGGACTTGACTGAAAAGGTGAAATTCTTTGTGGTCCCTTTTGAATAAAGAAAATGAACCTTATGGACAAAGTATCAGTCTGTATAGATATTTGGTTTAAATCTTGTTTTGGCCTTTGAATGTTCATACTTATTTTATTTTAGTCTTCATAAATATTTTTAAGTGCGAGGAGGTGGGAAAGTGTTGATCATCTTTTCATTCGCAGTTAATTTGCTGGCATATTGTATGGCCTTTTTATATTGTCTCTTAATTCTCAAGGTTTCTGTTGCAGTTTCTTCATGGTTCTCCTTTCATGGATCATAGGGCTGAAACGCTTTGAATTAGTGCAGTTTTTTGCAATACTTTGGGAAATCAAGTATTTCAAGTTAAACTCTTTGGTCAGCACTGCATCAAGCGCGGCTTCGCTGTCCATCTGAAGCACATTCCCACTGGTATCATTGCACAGGTTAATATTTGTCTGATACATGTAATCAAGTTCGATAATATACTTCAGGTTTTTTTTGTTTACTTTTCAATCCAGTGCCCTTAAAGGTGGGTGGATAATTAGATGTTTGTTTTTATGTCATTTTCCATAAGGTATGTCCTCCTGCCGAATGATATGACATGTGCTGTTCTATTGAGCTCAGTCAGGAGCCCTGTGGATCTTGATGATTATTCGCCTCCTCCCTCCAGAGCTTCCTAA

mRNA sequence

ATGTTGGCGTCATTACCCAAGTCTCTACCTCGTAGGAATAAAGAAATAGAGGAGATAACTACATTTATAGAAAATGCTATCTGTGATGACCAAAGTTTGGGCCGATGCTTGTGTACACCCATGGTGTTCCAGGAACAGGCAAGGTATTATGAAGAAACGAAGCATAGCACATTGCATTCTTCAAGGTCAACTGCTCTGGTGGAATGGTATGTCCTCCTGCCGAATGATATGACATGTGCTGTTCTATTGAGCTCAGTCAGGAGCCCTGTGGATCTTGATGATTATTCGCCTCCTCCCTCCAGAGCTTCCTAA

Coding sequence (CDS)

ATGTTGGCGTCATTACCCAAGTCTCTACCTCGTAGGAATAAAGAAATAGAGGAGATAACTACATTTATAGAAAATGCTATCTGTGATGACCAAAGTTTGGGCCGATGCTTGTGTACACCCATGGTGTTCCAGGAACAGGCAAGGTATTATGAAGAAACGAAGCATAGCACATTGCATTCTTCAAGGTCAACTGCTCTGGTGGAATGGTATGTCCTCCTGCCGAATGATATGACATGTGCTGTTCTATTGAGCTCAGTCAGGAGCCCTGTGGATCTTGATGATTATTCGCCTCCTCCCTCCAGAGCTTCCTAA

Protein sequence

MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCLCTPMVFQEQARYYEETKHSTLHSSRSTALVEWYVLLPNDMTCAVLLSSVRSPVDLDDYSPPPSRAS

Homology

[Close]

BLAST of Sgr020837 vs. NCBI nr
Match: XP_022154362.1 (origin of replication complex subunit 1B-like [Momordica charantia] >XP_022154363.1 origin of replication complex subunit 1B-like [Momordica charantia])

HSP 1 Score: 71.6 bits (174), Expect = 4.4e-09
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           MLASLPKSLP RNKEIEEITTFIE+AICDDQ LGRCL
Sbjct: 408 MLASLPKSLPCRNKEIEEITTFIESAICDDQCLGRCL 444

[Close]

BLAST of Sgr020837 vs. NCBI nr
Match: XP_016899376.1 (PREDICTED: origin of replication complex subunit 1B-like [Cucumis melo])

HSP 1 Score: 70.9 bits (172), Expect = 7.5e-09
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           MLASLPKSLP RNKEIEEITTFIE+A+CDDQ LGRCL
Sbjct: 399 MLASLPKSLPCRNKEIEEITTFIESALCDDQCLGRCL 435

[Close]

BLAST of Sgr020837 vs. NCBI nr
Match: XP_031742568.1 (origin of replication complex subunit 1-like [Cucumis sativus])

HSP 1 Score: 70.9 bits (172), Expect = 7.5e-09
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           MLASLPKSLP RNKEIEEITTFIE+A+CDDQ LGRCL
Sbjct: 134 MLASLPKSLPCRNKEIEEITTFIESALCDDQCLGRCL 170

[Close]

BLAST of Sgr020837 vs. NCBI nr
Match: KAE8647765.1 (hypothetical protein Csa_002969 [Cucumis sativus])

HSP 1 Score: 70.9 bits (172), Expect = 7.5e-09
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           MLASLPKSLP RNKEIEEITTFIE+A+CDDQ LGRCL
Sbjct: 373 MLASLPKSLPCRNKEIEEITTFIESALCDDQCLGRCL 409

[Close]

BLAST of Sgr020837 vs. NCBI nr
Match: KAA0052480.1 (origin of replication complex subunit 1B-like [Cucumis melo var. makuwa] >TYK13342.1 origin of replication complex subunit 1B-like [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 7.5e-09
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           MLASLPKSLP RNKEIEEITTFIE+A+CDDQ LGRCL
Sbjct: 399 MLASLPKSLPCRNKEIEEITTFIESALCDDQCLGRCL 435

[Close]

BLAST of Sgr020837 vs. ExPASy Swiss-Prot
Match: Q5SMU7 (Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ORC1 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.8e-08
Identity = 25/37 (67.57%), Postives = 34/37 (91.89%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           +LA+LPKSLP R+KE+EEI+ F+++AIC+DQ LGRCL
Sbjct: 428 LLATLPKSLPCRDKEMEEISAFVKDAICNDQCLGRCL 464

[Close]

BLAST of Sgr020837 vs. ExPASy Swiss-Prot
Match: Q9SU24 (Origin of replication complex subunit 1B OS=Arabidopsis thaliana OX=3702 GN=ORC1B PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.3e-07
Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           +LA+ PKSLP R+KE+EEIT+FI+ +I DDQ LGRC+
Sbjct: 431 LLATRPKSLPCRSKEMEEITSFIKGSISDDQCLGRCM 467

[Close]

BLAST of Sgr020837 vs. ExPASy Swiss-Prot
Match: Q710E8 (Origin of replication complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=ORC1A PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.5e-07
Identity = 24/37 (64.86%), Postives = 31/37 (83.78%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           +LA+ PKSLP R+KE+EEIT FI+ +I DDQ LGRC+
Sbjct: 426 LLATRPKSLPCRSKEMEEITAFIKGSISDDQCLGRCM 462

[Close]

BLAST of Sgr020837 vs. ExPASy TrEMBL
Match: A0A6J1DLH3 (Origin recognition complex subunit 1 OS=Momordica charantia OX=3673 GN=LOC111021645 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.1e-09
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           MLASLPKSLP RNKEIEEITTFIE+AICDDQ LGRCL
Sbjct: 408 MLASLPKSLPCRNKEIEEITTFIESAICDDQCLGRCL 444

[Close]

BLAST of Sgr020837 vs. ExPASy TrEMBL
Match: A0A5D3CPN7 (Origin recognition complex subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009670 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.6e-09
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           MLASLPKSLP RNKEIEEITTFIE+A+CDDQ LGRCL
Sbjct: 399 MLASLPKSLPCRNKEIEEITTFIESALCDDQCLGRCL 435

[Close]

BLAST of Sgr020837 vs. ExPASy TrEMBL
Match: A0A1S4DTQ8 (Origin recognition complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103484307 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.6e-09
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           MLASLPKSLP RNKEIEEITTFIE+A+CDDQ LGRCL
Sbjct: 399 MLASLPKSLPCRNKEIEEITTFIESALCDDQCLGRCL 435

[Close]

BLAST of Sgr020837 vs. ExPASy TrEMBL
Match: A0A0A0LED3 (Origin recognition complex subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_3G644850 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.7e-09
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           MLASLPKSLP RNKEIEEITTF+E+A+CDDQ LGRCL
Sbjct: 412 MLASLPKSLPCRNKEIEEITTFVESALCDDQCLGRCL 448

[Close]

BLAST of Sgr020837 vs. ExPASy TrEMBL
Match: A0A0A0KM76 (Origin recognition complex subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_6G525570 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.7e-09
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           MLASLPKSLP RNKEIEEITTF+E+A+CDDQ LGRCL
Sbjct: 134 MLASLPKSLPCRNKEIEEITTFVESALCDDQCLGRCL 170

[Close]

BLAST of Sgr020837 vs. TAIR 10
Match: AT4G12620.1 (origin of replication complex 1B )

HSP 1 Score: 54.7 bits (130), Expect = 5.2e-08
Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           +LA+ PKSLP R+KE+EEIT+FI+ +I DDQ LGRC+
Sbjct: 431 LLATRPKSLPCRSKEMEEITSFIKGSISDDQCLGRCM 467

[Close]

BLAST of Sgr020837 vs. TAIR 10
Match: AT4G14700.1 (origin recognition complex 1 )

HSP 1 Score: 54.3 bits (129), Expect = 6.7e-08
Identity = 24/37 (64.86%), Postives = 31/37 (83.78%), Query Frame = 0


Query: 1   MLASLPKSLPRRNKEIEEITTFIENAICDDQSLGRCL 38
           +LA+ PKSLP R+KE+EEIT FI+ +I DDQ LGRC+
Sbjct: 426 LLATRPKSLPCRSKEMEEITAFIKGSISDDQCLGRCM 462

The following BLAST results are available for this feature:

BLAST of Sgr020837 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154362.1	4.4e-09	91.89	origin of replication complex subunit 1B-like [Momordica charantia] >XP_02215436...	[more]
XP_016899376.1	7.5e-09	89.19	PREDICTED: origin of replication complex subunit 1B-like [Cucumis melo]	[more]
XP_031742568.1	7.5e-09	89.19	origin of replication complex subunit 1-like [Cucumis sativus]	[more]
KAE8647765.1	7.5e-09	89.19	hypothetical protein Csa_002969 [Cucumis sativus]	[more]
KAA0052480.1	7.5e-09	89.19	origin of replication complex subunit 1B-like [Cucumis melo var. makuwa] >TYK133...	[more]

BLAST of Sgr020837 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5SMU7	3.8e-08	67.57	Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q9SU24	7.3e-07	64.86	Origin of replication complex subunit 1B OS=Arabidopsis thaliana OX=3702 GN=ORC1...	[more]
Q710E8	9.5e-07	64.86	Origin of replication complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=ORC1...	[more]

BLAST of Sgr020837 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLH3	2.1e-09	91.89	Origin recognition complex subunit 1 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A5D3CPN7	3.6e-09	89.19	Origin recognition complex subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S4DTQ8	3.6e-09	89.19	Origin recognition complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103484307 PE=...	[more]
A0A0A0LED3	4.7e-09	86.49	Origin recognition complex subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_3G644850 ...	[more]
A0A0A0KM76	4.7e-09	86.49	Origin recognition complex subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_6G525570 ...	[more]

BLAST of Sgr020837 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12620.1	5.2e-08	64.86	origin of replication complex 1B	[more]
AT4G14700.1	6.7e-08	64.86	origin recognition complex 1	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr020837.1	Sgr020837.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0006270	DNA replication initiation
biological_process	GO:0033314	mitotic DNA replication checkpoint signaling
cellular_component	GO:0005664	nuclear origin of replication recognition complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003688	DNA replication origin binding
molecular_function	GO:0046872	metal ion binding