Sgr020833 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr020833
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153574: 431683 .. 433177 (+)
RNA-Seq Expression	Sgr020833
Synteny	Sgr020833

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCGGCATCCAATTCAAAAACTTTAGATATGACCTGAAGTCCAAGTTGACAAACCTACGTACAAAGGCACCTGCGTGTGTTGGACTGCTCCTTAAACCCTTCAAATACCACTTTGAAAAGTACACCCTATCATTGAAAGGCTGGAGCCTTAAAACAGCAAAAACCAAAAGGAAGATGACTGCGCCGAGAATATTGATAGCTGCAGAAACCCCAATATCTTGTAAAGTAGCCATTTGCTTATAGCTCCGCAAGCGAGTTTATTTCCTGAAACAAATATTAGAGCAGATTCCGTCACCGAACTGATGGAAATAAATCGTCTTCAAAGTTTCGTCTCCACTAAAGGCATATCTACATGCCCATTAACTACTAAATTAGAGCATCGAGAATCCAACATCTAGCTCTTTCAAATAACCTATCAGCTAAATGAAATCGTTATCCTACAAAAAGTTGATATTGGCAAGAAATGGAAAAGCAACCCAATTAGCAGTTGGAAAAGACGAATTAGTATTTCCATTAACTACTAAATTAGAGCATCGAGAATCCAACATCTAGCTCTTTCAAATAACCTATCAGCTAAATGAAATCGTTATCCTACAAAAAGTTGATATTGGCAAGAAATGGAAAAGCAACCCAATTAGCAGTTGGAAAAGACGAATTAGTATTTCCATTGATGATTTCTATCACCGATATAAATTTGACTAAACGAGTTCATATTATCCACGGACGAAGTAATTAAACCATAAACTGTAATGTTTCTGCTGCCACCAATTCCATAATTAGTAAACTATTAGATAGAACGAAAGGAAACAAAAATAGTAAATTACCAAGCAGTTTCAGCACAAAATCATACAGTCACCAAATTTCACTGCCACGCATTAAATCAATCCCAACCGATTCACTTAAAATCGTACATTAAAAAGAACGAATACTAGAAAAAGGGAGCAGTCCCTACTCTCTATTAATCTCCGAAGCCAACCTCCACAAACTTCAGCACGCCAAAACCCACGAGAATCAGAATACCGAAGAAGAAGATGATGAACCAGACAGCCTCCGGATTGCTTCAAAGACGAATCAAACCAAAAAAGATTCTCCAACTCCTTTTGCAGGAAAACTAACACGATACGCTACTAAACTCCCTTTCTTCCCTCCGATTCGCCGCCACCTACTTGTCCAGCCAAAACAGGCAACCGTCCAACAAACAAGGAATTGCGTCCGGAACTAACAACTTATCACGTGAAAACCCAACCAAAAACAGCAGAATATCTCACACTGCGAAGAAACCGAAAGCATAGCCATAGTCAGATTCAAAGAAAGCAAAAGCGATACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCTCGTGGAGACGGAAATGGTGGTGAAGAGTTGGCCGTGAGATCCATCGGCATCGGGTTGAGGTGGATTTTAACGCCGGGGGAGGGATTGGATTCCGAAAGTAATGAACTGTTGAAGTCCAATTAG

mRNA sequence

ATGGCTTCCGGCATCCAATTCAAAAACTTTAGATATGACCTGAAGTCCAAGTTGACAAACCTACGTACAAAGGCACCTGCGTGTGTTGGACTGCTCCTTAAACCCTTCAAATACCACTTTGAAAAGTACACCCTATCATTGAAAGGCTGGAGCCTTAAAACAGCAAAAACCAAAAGGAAGATGACTGCGCCGAGAATATTGATAGCTGCAGAAACCCCAATATCTTGTAAACACGCCAAAACCCACGAGAATCAGAATACCGAAGAAGAAGATGATGAACCAGACAGCCTCCGGATTGCTTCAAAGACGAATCAAACCAAAAAAGATTCTCCAACTCCTTTTGCAGGAAAACTAACACGATACGCTACTAAACTCCCTTTCTTCCCTCCGATTCGCCGCCACCTACTTCAGAATATCTCACACTGCGAAGAAACCGAAAGCATAGCCATAGTCAGATTCAAAGAAAGCAAAAGCGATACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCTCGTGGAGACGGAAATGGTGGTGAAGAGTTGGCCGTGAGATCCATCGGCATCGGGTTGAGGTGGATTTTAACGCCGGGGGAGGGATTGGATTCCGAAAGTAATGAACTGTTGAAGTCCAATTAG

Coding sequence (CDS)

ATGGCTTCCGGCATCCAATTCAAAAACTTTAGATATGACCTGAAGTCCAAGTTGACAAACCTACGTACAAAGGCACCTGCGTGTGTTGGACTGCTCCTTAAACCCTTCAAATACCACTTTGAAAAGTACACCCTATCATTGAAAGGCTGGAGCCTTAAAACAGCAAAAACCAAAAGGAAGATGACTGCGCCGAGAATATTGATAGCTGCAGAAACCCCAATATCTTGTAAACACGCCAAAACCCACGAGAATCAGAATACCGAAGAAGAAGATGATGAACCAGACAGCCTCCGGATTGCTTCAAAGACGAATCAAACCAAAAAAGATTCTCCAACTCCTTTTGCAGGAAAACTAACACGATACGCTACTAAACTCCCTTTCTTCCCTCCGATTCGCCGCCACCTACTTCAGAATATCTCACACTGCGAAGAAACCGAAAGCATAGCCATAGTCAGATTCAAAGAAAGCAAAAGCGATACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCTCGTGGAGACGGAAATGGTGGTGAAGAGTTGGCCGTGAGATCCATCGGCATCGGGTTGAGGTGGATTTTAACGCCGGGGGAGGGATTGGATTCCGAAAGTAATGAACTGTTGAAGTCCAATTAG

Protein sequence

MASGIQFKNFRYDLKSKLTNLRTKAPACVGLLLKPFKYHFEKYTLSLKGWSLKTAKTKRKMTAPRILIAAETPISCKHAKTHENQNTEEEDDEPDSLRIASKTNQTKKDSPTPFAGKLTRYATKLPFFPPIRRHLLQNISHCEETESIAIVRFKESKSDTERERERERERERPRGDGNGGEELAVRSIGIGLRWILTPGEGLDSESNELLKSN

Homology

[Close]

BLAST of Sgr020833 vs. NCBI nr
Match: KAE8653654.1 (hypothetical protein Csa_007613 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-04
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 53  KTAKTKRKMTAPRILIAAETPISCKHAKTHENQNTEEEDDEPDSLRIASKTNQTKKDSPT 112
           K  KT++  +   +L++     S + AK  +N    EE+DE + L+IASKTNQTK+DSPT
Sbjct: 5   KNTKTRKIGSPYSVLVSNPKLQSLEQAKIQKN---GEEEDEEERLQIASKTNQTKEDSPT 64

Query: 113 PFAGKLTRYATKLPFFPPIRRHLL 137
            F GKLT YATK        RHLL
Sbjct: 65  CFTGKLTGYATKFLSL----RHLL 81

[Close]

BLAST of Sgr020833 vs. ExPASy TrEMBL
Match: A0A0A9DSS3 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-05
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 2   ASGIQFKNFRYDLKSKLTNLRTKAPACVGLLLKPFKYHFEK 43
           A+GIQFKNF+YDL SKLTN  T AP  +GL L P +YHF K
Sbjct: 70  AAGIQFKNFKYDLASKLTNFCTAAPEKIGLSLMPLRYHFGK 110

The following BLAST results are available for this feature:

BLAST of Sgr020833 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653654.1	3.9e-04	46.43	hypothetical protein Csa_007613 [Cucumis sativus]	[more]

BLAST of Sgr020833 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr020833 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A9DSS3	2.2e-05	65.85	Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1	[more]

BLAST of Sgr020833 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 150..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr020833.1	Sgr020833.1	mRNA