Sgr020759 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr020759
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Descriptiontranscription factor bHLH84-like
Locationtig00153554: 858386 .. 858658 (+)
RNA-Seq ExpressionSgr020759
SyntenySgr020759
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCCATTTCAGAGAGAGAATGGATCTCTCTCAGTGGAACATACACAGCTGAGGAGTCTGATTTCATGACTACTTTGCTCAATAACTATTGTCTTCCAAATGAGCTAAGTTCAGGCTTGAGCTTGGAAATCCCAACTGCTTATTGGGCTGCCAATGAACCACCAGCATTGACCATGGCAGCCATGGAAGAACCTTCTTACTACTCTTCAGATGCTTCTGATTCCAATATTTATGGCCTTCACAAGGCAACAATCATCATTACAGCTTGA

mRNA sequence

ATGGGAGCCATTTCAGAGAGAGAATGGATCTCTCTCAGTGGAACATACACAGCTGAGGAGTCTGATTTCATGACTACTTTGCTCAATAACTATTGTCTTCCAAATGAGCTAAGTTCAGGCTTGAGCTTGGAAATCCCAACTGCTTATTGGGCTGCCAATGAACCACCAGCATTGACCATGGCAGCCATGGAAGAACCTTCTTACTACTCTTCAGATGCTTCTGATTCCAATATTTATGGCCTTCACAAGGCAACAATCATCATTACAGCTTGA

Coding sequence (CDS)

ATGGGAGCCATTTCAGAGAGAGAATGGATCTCTCTCAGTGGAACATACACAGCTGAGGAGTCTGATTTCATGACTACTTTGCTCAATAACTATTGTCTTCCAAATGAGCTAAGTTCAGGCTTGAGCTTGGAAATCCCAACTGCTTATTGGGCTGCCAATGAACCACCAGCATTGACCATGGCAGCCATGGAAGAACCTTCTTACTACTCTTCAGATGCTTCTGATTCCAATATTTATGGCCTTCACAAGGCAACAATCATCATTACAGCTTGA

Protein sequence

MGAISEREWISLSGTYTAEESDFMTTLLNNYCLPNELSSGLSLEIPTAYWAANEPPALTMAAMEEPSYYSSDASDSNIYGLHKATIIITA
Homology
[Close]
BLAST of Sgr020759 vs. NCBI nr
Match: XP_022149290.1 (transcription factor bHLH84-like [Momordica charantia])

HSP 1 Score: 142.5 bits (358), Expect = 1.8e-30
Identity = 73/83 (87.95%), Postives = 77/83 (92.77%), Query Frame = 0 

Query: 1  MGAISEREWISLSGTYTAEESDFMTTLLNNYCLPNELSSGLSLEIPTAYWAANEP-PALT 60
          +GAISEREWISLSGTYTAEESDFM  LL+NYCLPNEL+SGLSLEIP +YWAANEP PAL 
Sbjct: 4  IGAISEREWISLSGTYTAEESDFMVNLLSNYCLPNELNSGLSLEIPPSYWAANEPSPALA 63

Query: 61 MAAMEEPSYYSSDASD-SNIYGL 82
          MAAMEEPSYYSSDASD SNIYGL
Sbjct: 64 MAAMEEPSYYSSDASDSSNIYGL 86

[Close]
BLAST of Sgr020759 vs. NCBI nr
Match: XP_038903006.1 (transcription factor bHLH84-like [Benincasa hispida])

HSP 1 Score: 138.3 bits (347), Expect = 3.3e-29
Identity = 70/86 (81.40%), Postives = 77/86 (89.53%), Query Frame = 0 

Query: 1  MGAISEREWISLSGTYTAEESDFMTTLLNNYCLPNELSSGLSLEIPTAYWAANE-PPALT 60
          +GAISEREWISLSG YTAEESDFM  LLNNYCLPNEL+S LSLEIP+AYWA+NE PP+LT
Sbjct: 4  IGAISEREWISLSGAYTAEESDFMANLLNNYCLPNELNSDLSLEIPSAYWASNEPPPSLT 63

Query: 61 MAAMEEPSYYSSDASD-SNIYGLHKA 85
          MAAM+EPSYYSSDASD SN+Y L  A
Sbjct: 64 MAAMDEPSYYSSDASDSSNVYNLPPA 89

[Close]
BLAST of Sgr020759 vs. NCBI nr
Match: TYK29473.1 (transcription factor bHLH84-like [Cucumis melo var. makuwa])

HSP 1 Score: 110.5 bits (275), Expect = 7.4e-21
Identity = 57/81 (70.37%), Postives = 64/81 (79.01%), Query Frame = 0 

Query: 2  GAISEREWISLSGTYTAEESDFMTTLLNNYCLPNELSSGLSLEIPTAYWAANEPPALTMA 61
          GAISEREWISLSG YTAEESDFM  LLNNYC+PNEL+S L+LEIP++YWA++        
Sbjct: 4  GAISEREWISLSGAYTAEESDFMANLLNNYCIPNELNSDLTLEIPSSYWASS-------- 63

Query: 62 AMEEPSYYSSDASD-SNIYGL 82
             EPSYYSSDASD SNIY L
Sbjct: 64 --NEPSYYSSDASDSSNIYAL 74

[Close]
BLAST of Sgr020759 vs. NCBI nr
Match: XP_008454391.1 (PREDICTED: transcription factor bHLH84-like [Cucumis melo] >KAA0044344.1 transcription factor bHLH84-like [Cucumis melo var. makuwa])

HSP 1 Score: 110.5 bits (275), Expect = 7.4e-21
Identity = 57/81 (70.37%), Postives = 64/81 (79.01%), Query Frame = 0 

Query: 2  GAISEREWISLSGTYTAEESDFMTTLLNNYCLPNELSSGLSLEIPTAYWAANEPPALTMA 61
          GAISEREWISLSG YTAEESDFM  LLNNYC+PNEL+S L+LEIP++YWA++        
Sbjct: 4  GAISEREWISLSGAYTAEESDFMANLLNNYCIPNELNSDLTLEIPSSYWASS-------- 63

Query: 62 AMEEPSYYSSDASD-SNIYGL 82
             EPSYYSSDASD SNIY L
Sbjct: 64 --NEPSYYSSDASDSSNIYAL 74

[Close]
BLAST of Sgr020759 vs. NCBI nr
Match: XP_004152375.1 (transcription factor bHLH84 [Cucumis sativus] >KGN52770.1 hypothetical protein Csa_014823 [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-20
Identity = 57/81 (70.37%), Postives = 64/81 (79.01%), Query Frame = 0 

Query: 2  GAISEREWISLSGTYTAEESDFMTTLLNNYCLPNELSSGLSLEIPTAYWAANEPPALTMA 61
          GAISEREWISLSG YTAEESDFM  LL+NYC+PNEL+S LSLEIP++YWA++        
Sbjct: 3  GAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASS-------- 62

Query: 62 AMEEPSYYSSDASD-SNIYGL 82
             EPSYYSSDASD SNIY L
Sbjct: 63 --NEPSYYSSDASDSSNIYAL 73

[Close]
BLAST of Sgr020759 vs. ExPASy TrEMBL
Match: A0A6J1D5B1 (transcription factor bHLH84-like OS=Momordica charantia OX=3673 GN=LOC111017743 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.5e-31
Identity = 73/83 (87.95%), Postives = 77/83 (92.77%), Query Frame = 0 

Query: 1  MGAISEREWISLSGTYTAEESDFMTTLLNNYCLPNELSSGLSLEIPTAYWAANEP-PALT 60
          +GAISEREWISLSGTYTAEESDFM  LL+NYCLPNEL+SGLSLEIP +YWAANEP PAL 
Sbjct: 4  IGAISEREWISLSGTYTAEESDFMVNLLSNYCLPNELNSGLSLEIPPSYWAANEPSPALA 63

Query: 61 MAAMEEPSYYSSDASD-SNIYGL 82
          MAAMEEPSYYSSDASD SNIYGL
Sbjct: 64 MAAMEEPSYYSSDASDSSNIYGL 86

[Close]
BLAST of Sgr020759 vs. ExPASy TrEMBL
Match: A0A5D3E098 (Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00700 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.6e-21
Identity = 57/81 (70.37%), Postives = 64/81 (79.01%), Query Frame = 0 

Query: 2  GAISEREWISLSGTYTAEESDFMTTLLNNYCLPNELSSGLSLEIPTAYWAANEPPALTMA 61
          GAISEREWISLSG YTAEESDFM  LLNNYC+PNEL+S L+LEIP++YWA++        
Sbjct: 4  GAISEREWISLSGAYTAEESDFMANLLNNYCIPNELNSDLTLEIPSSYWASS-------- 63

Query: 62 AMEEPSYYSSDASD-SNIYGL 82
             EPSYYSSDASD SNIY L
Sbjct: 64 --NEPSYYSSDASDSSNIYAL 74

[Close]
BLAST of Sgr020759 vs. ExPASy TrEMBL
Match: A0A5A7TMH6 (Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00700 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.6e-21
Identity = 57/81 (70.37%), Postives = 64/81 (79.01%), Query Frame = 0 

Query: 2  GAISEREWISLSGTYTAEESDFMTTLLNNYCLPNELSSGLSLEIPTAYWAANEPPALTMA 61
          GAISEREWISLSG YTAEESDFM  LLNNYC+PNEL+S L+LEIP++YWA++        
Sbjct: 4  GAISEREWISLSGAYTAEESDFMANLLNNYCIPNELNSDLTLEIPSSYWASS-------- 63

Query: 62 AMEEPSYYSSDASD-SNIYGL 82
             EPSYYSSDASD SNIY L
Sbjct: 64 --NEPSYYSSDASDSSNIYAL 74

[Close]
BLAST of Sgr020759 vs. ExPASy TrEMBL
Match: A0A1S3BZ99 (transcription factor bHLH84-like OS=Cucumis melo OX=3656 GN=LOC103494806 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.6e-21
Identity = 57/81 (70.37%), Postives = 64/81 (79.01%), Query Frame = 0 

Query: 2  GAISEREWISLSGTYTAEESDFMTTLLNNYCLPNELSSGLSLEIPTAYWAANEPPALTMA 61
          GAISEREWISLSG YTAEESDFM  LLNNYC+PNEL+S L+LEIP++YWA++        
Sbjct: 4  GAISEREWISLSGAYTAEESDFMANLLNNYCIPNELNSDLTLEIPSSYWASS-------- 63

Query: 62 AMEEPSYYSSDASD-SNIYGL 82
             EPSYYSSDASD SNIY L
Sbjct: 64 --NEPSYYSSDASDSSNIYAL 74

[Close]
BLAST of Sgr020759 vs. ExPASy TrEMBL
Match: A0A0A0KT10 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000890 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.1e-21
Identity = 57/81 (70.37%), Postives = 64/81 (79.01%), Query Frame = 0 

Query: 2  GAISEREWISLSGTYTAEESDFMTTLLNNYCLPNELSSGLSLEIPTAYWAANEPPALTMA 61
          GAISEREWISLSG YTAEESDFM  LL+NYC+PNEL+S LSLEIP++YWA++        
Sbjct: 3  GAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASS-------- 62

Query: 62 AMEEPSYYSSDASD-SNIYGL 82
             EPSYYSSDASD SNIY L
Sbjct: 63 --NEPSYYSSDASDSSNIYAL 73

The following BLAST results are available for this feature:
BLAST of Sgr020759 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022149290.11.8e-3087.95transcription factor bHLH84-like [Momordica charantia][more]
XP_038903006.13.3e-2981.40transcription factor bHLH84-like [Benincasa hispida][more]
TYK29473.17.4e-2170.37transcription factor bHLH84-like [Cucumis melo var. makuwa][more]
XP_008454391.17.4e-2170.37PREDICTED: transcription factor bHLH84-like [Cucumis melo] >KAA0044344.1 transcr... [more]
XP_004152375.11.3e-2070.37transcription factor bHLH84 [Cucumis sativus] >KGN52770.1 hypothetical protein C... [more]
BLAST of Sgr020759 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr020759 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D5B18.5e-3187.95transcription factor bHLH84-like OS=Momordica charantia OX=3673 GN=LOC111017743 ... [more]
A0A5D3E0983.6e-2170.37Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5A7TMH63.6e-2170.37Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A1S3BZ993.6e-2170.37transcription factor bHLH84-like OS=Cucumis melo OX=3656 GN=LOC103494806 PE=4 SV... [more]
A0A0A0KT106.1e-2170.37BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000890 PE=4 S... [more]
BLAST of Sgr020759 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr020759.1Sgr020759.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0005634 nucleus
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding