Sgr020512 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr020512
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	sequence-specific DNA binding transcription factors;transcription regulators
Location	tig00153533: 1017678 .. 1017971 (+)
RNA-Seq Expression	Sgr020512
Synteny	Sgr020512

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTCTATCCATTCGTTCGGCCGATCAAGAAGAGCAGCCTCCATTTCCAATGTGAAAGGAAGGAAGAGAAGGCTGAAGCTTTATTGCTCGGCCAAGAACACCGCCACCGCCGCCTCCAGAACAACCTCCGCCGCCATGCACAAGAGGCTGAGGAATCTGCAGAGGATCGTTCCGGCCGGCACCCATGAAACCGACCTCAACCACTTGTTCCAAAGAACTGCAGATTATATCTTCGCTTTACAAGCTAAGCTTAACATCCTCAAGGATCTGACTTCTTTCTATGGCGTCTGA

mRNA sequence

ATGAGGTCTATCCATTCGTTCGGCCGATCAAGAAGAGCAGCCTCCATTTCCAATGTGAAAGGAAGGAAGAGAAGGCTGAAGCTTTATTGCTCGGCCAAGAACACCGCCACCGCCGCCTCCAGAACAACCTCCGCCGCCATGCACAAGAGGCTGAGGAATCTGCAGAGGATCGTTCCGGCCGGCACCCATGAAACCGACCTCAACCACTTGTTCCAAAGAACTGCAGATTATATCTTCGCTTTACAAGCTAAGCTTAACATCCTCAAGGATCTGACTTCTTTCTATGGCGTCTGA

Coding sequence (CDS)

ATGAGGTCTATCCATTCGTTCGGCCGATCAAGAAGAGCAGCCTCCATTTCCAATGTGAAAGGAAGGAAGAGAAGGCTGAAGCTTTATTGCTCGGCCAAGAACACCGCCACCGCCGCCTCCAGAACAACCTCCGCCGCCATGCACAAGAGGCTGAGGAATCTGCAGAGGATCGTTCCGGCCGGCACCCATGAAACCGACCTCAACCACTTGTTCCAAAGAACTGCAGATTATATCTTCGCTTTACAAGCTAAGCTTAACATCCTCAAGGATCTGACTTCTTTCTATGGCGTCTGA

Protein sequence

MRSIHSFGRSRRAASISNVKGRKRRLKLYCSAKNTATAASRTTSAAMHKRLRNLQRIVPAGTHETDLNHLFQRTADYIFALQAKLNILKDLTSFYGV

Homology

[Close]

BLAST of Sgr020512 vs. NCBI nr
Match: KAE8651649.1 (hypothetical protein Csa_021260, partial [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 2.2e-23
Identity = 69/104 (66.35%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 1   MRSIHSFGRSRRAASISNVK-GRKRRLKLYCSAKNT------ATAASRTTSAAMHKRLRN 60
           MRSIHSF   R+A +IS +K  R+RR+KL    K+T      AT    T SAAMHKRLRN
Sbjct: 59  MRSIHSFRSRRQATTISKLKPSRRRRIKLLHLPKHTSSSTVSATTNRTTPSAAMHKRLRN 118

Query: 61  LQRIVPAGTHETDLNHLFQRTADYIFALQAKLNILKDLTSFYGV 98
           LQR+VP  THET+LNHLFQRTADYI ALQ KLNILKDLTSFYG+
Sbjct: 119 LQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSFYGL 162

[Close]

BLAST of Sgr020512 vs. NCBI nr
Match: KAG6598843.1 (Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 118.6 bits (296), Expect = 2.9e-23
Identity = 69/105 (65.71%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MRSIHSFGRSRRAASISNVK-GRKRRLKLYCSAKNT-------ATAASRTTSAAMHKRLR 60
           MRSIHSF + R+A S +N+K  R+RRLKL    KNT       A A   T S AMHKRLR
Sbjct: 1   MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLR 60

Query: 61  NLQRIVPAGTHETDLNHLFQRTADYIFALQAKLNILKDLTSFYGV 98
           NLQR+VP   H+TDLNHLFQRTADYI ALQ KLNILKDLTSFYG+
Sbjct: 61  NLQRLVPGHNHDTDLNHLFQRTADYIQALQLKLNILKDLTSFYGL 105

[Close]

BLAST of Sgr020512 vs. NCBI nr
Match: RYR76925.1 (hypothetical protein Ahy_A01g001434 [Arachis hypogaea])

HSP 1 Score: 64.7 bits (156), Expect = 5.0e-07
Identity = 34/77 (44.16%), Postives = 52/77 (67.53%), Query Frame = 0


Query: 21 GRKRRLKLYCSAKNTATAASRTTSAAMHKRLRNLQRIVPAGTHETDLNHLFQRTADYIFA 80
          GRK+R KL C AKN     ++TTS+ + K+L  LQR +P  +   D++ LF+   +YI A
Sbjct: 9  GRKKRAKL-CLAKNANGGGNKTTSSCLEKKLGELQRSIPGSSGMEDMHTLFKGIENYILA 68

Query: 81 LQAKLNILKDLTSFYGV 98
          L+AK+ +L+ L++FYGV
Sbjct: 69 LEAKVTVLRCLSNFYGV 84

[Close]

BLAST of Sgr020512 vs. NCBI nr
Match: RYR30345.1 (hypothetical protein Ahy_B01g055132 [Arachis hypogaea])

HSP 1 Score: 63.2 bits (152), Expect = 1.5e-06
Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 0


Query: 21 GRKRRLKLYCSAKNTATAASRTTSAAMHKRLRNLQRIVPAGTHETDLNHLFQRTADYIFA 80
          GRK+R KL C AKN     ++TT + + K+L  LQR +P  +   D++ LF+   +YI A
Sbjct: 11 GRKKRAKL-CLAKNANGGGNKTTPSCLEKKLGELQRSIPGSSGMEDMHTLFKSIENYILA 70

Query: 81 LQAKLNILKDLTSFYGV 98
          L+AK+ +L+ L++FYGV
Sbjct: 71 LEAKVTVLRCLSNFYGV 86

[Close]

BLAST of Sgr020512 vs. NCBI nr
Match: EOY31590.1 (Uncharacterized protein TCM_038540 [Theobroma cacao])

HSP 1 Score: 63.2 bits (152), Expect = 1.5e-06
Identity = 33/79 (41.77%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 19 VKGRKRRLKLYCSAKNTATAASRTTSAAMHKRLRNLQRIVPAGTHETDLNHLFQRTADYI 78
          ++GRK R +   SA +++  + RT   ++ ++L+ LQRI+PA   E ++  LF RTA+YI
Sbjct: 16 MRGRKLRRQSLSSANDSSAESVRT---SIERKLQQLQRILPAACSEINMETLFLRTAEYI 75

Query: 79 FALQAKLNILKDLTSFYGV 98
          F L+AK+++L++L++FYGV
Sbjct: 76 FLLEAKVSLLQNLSTFYGV 91

[Close]

BLAST of Sgr020512 vs. ExPASy TrEMBL
Match: A0A0A0LJ57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047780 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23
Identity = 69/104 (66.35%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 1   MRSIHSFGRSRRAASISNVK-GRKRRLKLYCSAKNT------ATAASRTTSAAMHKRLRN 60
           MRSIHSF   R+A +IS +K  R+RR+KL    K+T      AT    T SAAMHKRLRN
Sbjct: 1   MRSIHSFRSRRQATTISKLKPSRRRRIKLLHLPKHTSSSTVSATTNRTTPSAAMHKRLRN 60

Query: 61  LQRIVPAGTHETDLNHLFQRTADYIFALQAKLNILKDLTSFYGV 98
           LQR+VP  THET+LNHLFQRTADYI ALQ KLNILKDLTSFYG+
Sbjct: 61  LQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSFYGL 104

[Close]

BLAST of Sgr020512 vs. ExPASy TrEMBL
Match: A0A445EN78 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A01g001434 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-07
Identity = 34/77 (44.16%), Postives = 52/77 (67.53%), Query Frame = 0


Query: 21 GRKRRLKLYCSAKNTATAASRTTSAAMHKRLRNLQRIVPAGTHETDLNHLFQRTADYIFA 80
          GRK+R KL C AKN     ++TTS+ + K+L  LQR +P  +   D++ LF+   +YI A
Sbjct: 9  GRKKRAKL-CLAKNANGGGNKTTSSCLEKKLGELQRSIPGSSGMEDMHTLFKGIENYILA 68

Query: 81 LQAKLNILKDLTSFYGV 98
          L+AK+ +L+ L++FYGV
Sbjct: 69 LEAKVTVLRCLSNFYGV 84

[Close]

BLAST of Sgr020512 vs. ExPASy TrEMBL
Match: A0A061GP11 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038540 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.1e-07
Identity = 33/79 (41.77%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 19 VKGRKRRLKLYCSAKNTATAASRTTSAAMHKRLRNLQRIVPAGTHETDLNHLFQRTADYI 78
          ++GRK R +   SA +++  + RT   ++ ++L+ LQRI+PA   E ++  LF RTA+YI
Sbjct: 16 MRGRKLRRQSLSSANDSSAESVRT---SIERKLQQLQRILPAACSEINMETLFLRTAEYI 75

Query: 79 FALQAKLNILKDLTSFYGV 98
          F L+AK+++L++L++FYGV
Sbjct: 76 FLLEAKVSLLQNLSTFYGV 91

[Close]

BLAST of Sgr020512 vs. ExPASy TrEMBL
Match: A0A445AV75 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B01g055132 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.1e-07
Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 0


Query: 21 GRKRRLKLYCSAKNTATAASRTTSAAMHKRLRNLQRIVPAGTHETDLNHLFQRTADYIFA 80
          GRK+R KL C AKN     ++TT + + K+L  LQR +P  +   D++ LF+   +YI A
Sbjct: 11 GRKKRAKL-CLAKNANGGGNKTTPSCLEKKLGELQRSIPGSSGMEDMHTLFKSIENYILA 70

Query: 81 LQAKLNILKDLTSFYGV 98
          L+AK+ +L+ L++FYGV
Sbjct: 71 LEAKVTVLRCLSNFYGV 86

[Close]

BLAST of Sgr020512 vs. ExPASy TrEMBL
Match: A0A6P5ZFS0 (uncharacterized protein LOC111300264 OS=Durio zibethinus OX=66656 GN=LOC111300264 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-06
Identity = 38/98 (38.78%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 1   MRSIHSFGRSRRAASISNVKGRK-RRLKLYCSAKNTATAASRTTSAAMHKRLRNLQRIVP 60
           MRS     R+RR   ++  +GR  RR  L  + ++ A AA+ +   ++ ++LR LQR++P
Sbjct: 5   MRSSKRSPRARRKVLVT--RGRNIRRQSLSLANESGAAAAAESVRTSIERKLRQLQRMLP 64

Query: 61  AGTHETDLNHLFQRTADYIFALQAKLNILKDLTSFYGV 98
           AG  E ++  LFQRTA++IF L+AK+  L++L++F G+
Sbjct: 65  AGCAEINMETLFQRTAEHIFLLEAKVRSLQNLSTFCGI 100

[Close]

BLAST of Sgr020512 vs. TAIR 10
Match: AT2G47270.1 (sequence-specific DNA binding transcription factors;transcription regulators )

HSP 1 Score: 42.4 bits (98), Expect = 2.5e-04
Identity = 22/72 (30.56%), Postives = 41/72 (56.94%), Query Frame = 0


Query: 20 KGRKRRLKLYCSAKNTATAASRTTSAAMHKRLRNLQRIVPAGTHETDLNHLFQRTADYIF 79
          + R+  +K        +  ASR    A+H+R++ L+ +VP       L+ LF++TADYI 
Sbjct: 21 RARRALVKKIMIRPRKSVEASRRPCRAIHRRVKTLKELVPNTKTSEGLDGLFRQTADYIL 80

Query: 80 ALQAKLNILKDL 92
          AL+ K+ +++ +
Sbjct: 81 ALEMKVKVMQTM 92

[Close]

BLAST of Sgr020512 vs. TAIR 10
Match: AT3G58850.1 (phy rapidly regulated 2 )

HSP 1 Score: 42.4 bits (98), Expect = 2.5e-04
Identity = 27/77 (35.06%), Postives = 40/77 (51.95%), Query Frame = 0


Query: 18  NVKGRKRRLKLYCSAKNTATAASRTTSAAMHKRLRNLQRIVPAGTHETDLNHLFQRTADY 77
           N + R+R      S   T           + +++  LQ IVP GT E  ++ LF+ TA Y
Sbjct: 30  NRRTRQRLSDATASVSETDVEDEDEDEEGVEEKIEALQTIVPGGT-ELGVDALFEETASY 89

Query: 78  IFALQAKLNILKDLTSF 95
           I ALQ ++N +K LT+F
Sbjct: 90  ILALQCQINAIKVLTTF 105

The following BLAST results are available for this feature:

BLAST of Sgr020512 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651649.1	2.2e-23	66.35	hypothetical protein Csa_021260, partial [Cucumis sativus]	[more]
KAG6598843.1	2.9e-23	65.71	Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
RYR76925.1	5.0e-07	44.16	hypothetical protein Ahy_A01g001434 [Arachis hypogaea]	[more]
RYR30345.1	1.5e-06	42.86	hypothetical protein Ahy_B01g055132 [Arachis hypogaea]	[more]
EOY31590.1	1.5e-06	41.77	Uncharacterized protein TCM_038540 [Theobroma cacao]	[more]

BLAST of Sgr020512 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr020512 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ57	1.1e-23	66.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047780 PE=4 SV=1	[more]
A0A445EN78	2.4e-07	44.16	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A01g001434 PE=4 SV=1	[more]
A0A061GP11	7.1e-07	41.77	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038540 PE=4 SV=1	[more]
A0A445AV75	7.1e-07	42.86	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B01g055132 PE=4 SV=1	[more]
A0A6P5ZFS0	1.2e-06	38.78	uncharacterized protein LOC111300264 OS=Durio zibethinus OX=66656 GN=LOC11130026...	[more]

BLAST of Sgr020512 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47270.1	2.5e-04	30.56	sequence-specific DNA binding transcription factors;transcription regulators	[more]
AT3G58850.1	2.5e-04	35.06	phy rapidly regulated 2	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR33124:SF52	SUBFAMILY NOT NAMED	coord: 1..97
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 1..97
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 39..92 e-value: 7.50155E-14 score: 58.4028
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 47..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr020512.1	Sgr020512.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0046983	protein dimerization activity