Sgr020456 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr020456
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	RNA polymerase II-associated protein 3
Location	tig00153533: 353171 .. 362266 (-)
RNA-Seq Expression	Sgr020456
Synteny	Sgr020456

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACAACATAGAGCTAGTTAGAAACGGAGATCATGAACCAATATCAGAGACAAAACACTCTATTCAGTTCATGTCAGGTCAGTATTAATCTTTCAAGTTGAGTTCTCTTTCTCGATTACAAATTGTGCTGGAACGATCTAATTTTCGTTGTGTTTATAGAGACATTACATCCAAAACGGAGGAGAACCACAAATCCAAAAGTGTGGGAGGTCGAATCCGAGCAAGAGGAGCATTCTTTATCATTGTCCCAGCACTCATCACCATCACAATCAGATCAAGAACAGACCCCAGTCCGAAAAGTCTCTGACTCAGTAACAAGTTCCCAAGGATTACGACTTCTTAAGCACGTGAGTCAGAGCTCAACTAGCGAACCTTACAGCATTTCTAGAACCCAACCCGAGTTCAGAAATGCTGTCCAAAGCGCTTCGCCACAAGATCATCCGTATTTCGGACACCAGAACCAGCTAAAGCCTGAACAGCAGCAGCTTCTCCATGTTGTTCGCCCAGTGAAAGAACACAAGTCCTTGGAGACCGGCCTCGTCCAGAACCTGGTAGCTAAATTCAATAATATGCCAAAACACAAATCACCACAAGCAACATTCCTGCAATATATAACTTTTACACTTTTTAATTCTTCTGTTGTCACGTTCTTTTCAGATTGGATCGGAGGTTCGAGGAAGAGTCGACGGGGCTTTCGACTCTGGCTTCCTAATGACTGCTACTGTCAATGGGAAAATATACAGAGGTGTCCTGTTCACACCCGTAAGCATCCCCAAAAACAGAACTTTCTTCTTCCCCTTTTCAAGTAGTTAACAAATGCAAACATTTCCAAAGTATTGAAAAGTTTTCTGTTCAATCAGGGACCTGGGGTCTTCTCAAGGGCCACCATTGTTGCAGAGAATCCACTTCTTCCAGCAAACACACTCCCAAACTCGAATCACGTAGAACCGTCCAAGACCTTGCAGCATCGACCGTTGGTTCCGATGCCCGAGTCTGCTCAGAGCTTCAGGCAAGCTCAACTCAGTCCTCCAGTTCCAATCATAAAACCCACTCCATCTTCATTACCAGTCAAGCTTAGAGATGATCTTCAGGGTGTGTTTTTAACATTAGGGGGACCTGGAAATGGCTCTGCTTGAGAATGAGAACCAATAATGTGTAAAAACATATGCTGGAAGAAAAGAGAAAAAAAGAAGGAAGAAAGTTTGTAAACACAGTTTTGTATCTTGAATTTTAGGAATCACCACATTTAGAGATGAACCATTTGGTTTTTATATTTCAATCATAAAATTCGAATCCTTCGTTTCTCCCGATTGCTCATCTAACACTGTTTCTATCAAAAAAGTAATAAAGAAAATTGAGTTCTAAATAGTCACTCTAAGGAACTATGCAAAATAGTTTCGTAACTTCGAGAAAAAGGGTGCATCCAAGGGGATCTCGACAACTACAAATGCCTTAACAATTAACCATTATGGGTTTGGAGAAAAAAAAGTAATATTTACAAATAAAGTGATCTATTTTGAAAGCACTATTCTTTGATCAATTCAAACCACAATCATGTACTTTAATTATGAGAGGACAATGAAAATGGAAGGGAGAAATGAAATATATATATGGAAAGTAACAATTTTTGACACATTTAAATCTCATTTTTCTCGATTTATTTCATTCTAATTTTTTAACTTTCAATTTATGAACTAAAGTATCTTTTTTTGTTTTTGTTATTCTTTTGTCACATAATATCTGTTTGAGTGCGGCTACATTATCAAAAATTTATAGTATTACGATAGTATCAAAAAAATTTCATACTACTTTAATTCATTGATTGTTCTATCAGCAACATTTAAGAATAGTGTGAGGTCCATGAAATAAAATAATATATTACTTAATGATATGTCAATTCGTGAACGGAAAAAGTAGGTGTATTCCGTAGTACTAAAATTTTTTGCATACATTAATGCCCATGTTAGTAAATTAATACACATATTTGAAACCGCTTTATGTGTGTGTTAAACAGTTAAGGGCAAAATAATCACGAAGACTAGAATAATTATTTTTTAAAATAAAAAAAAAAAGAGAGAGAAATTAAAATTTAGGGAGAAAAAAAACAAACAAAAAGAAGCAAACACAAGGAAGTGTCATGTGTACGACGTTGATTCACTGTTAGTAAAGGGTCCCACGAGCGAAAGGGATTAAGGTAAAAAGAGCTGGGGCCCACTGCAAAAAAAAAAAAAAAAAAAAGGCCTCCCGCGCATCGCGCGCGATACTGTCGAGGTGTCAAAAATAAAATTAAAAAAAATGAAAAAAAAAAAGCAAGAGAACGGGGTCGGTGTCAGCTGTCTGATCTGTCTGCCACGTCAGCCAGCGATTGATTTATTAGAAGAAGAGAGAGAGAGAGTGAGACTGAGATGGGGCTTTCTAATGTCACCGGTCCTTTCGAGTTTTTGGATGTGACAGCTGACCTTCCCATCTCATTGCGTCATCCACGTATCCCCTCTGACTAATCGTACGCTTCTTATCTCACCTTCTTCAGTGTCTCCCCGGTCCCACCTTCTTACCCTAATTCTTCTCCTTTTGCCACGTGGATTCACTTTATTAGGCATTGGGCCGTCTTTTGGGCTCCCACTCGTTTCCCTTAATGGGCCTGATTTACCTGGCTTGGGTGTCCAAAAATGACCAGAAAACCCGATCAATCCAACTCCTAGTTCATGGGCTTTTTTCCTTTTCCTTTCGGCCCAATCAGTTGGGATTCACAGATTTTGTATCCATGGCGAAGACCCGACCGGAGGGGACTGCTTTCGGCCGACGCTCCGAGGCTTTGGACGCTTCGAGAAGCACTCCGAGACCTCGTTAAGCTAGAATCTCCGTTCTCTTTCTTCGTTTTCATTTCGTTTGGTCTCCAATGGCCGAGCCCTCTGGCAAGCACGGGCGTGATCAGTCTCTGGTATTTCTTTTGCTCATAAGCTGTTATAGTTCAGAGATTAAACGCTTGTTCATTCTTTTTCTTTTGCTTGAAAAATGAGAAGAAATATGAAGCTTCTACGTCAATTGGTTATAGCACTTGTAATTTTTAGTTGAGCGTCCTGTTGCTGCATATCGACGCATTGATAGGAAAAACAGTATGATTCGTTGTCTGTGGAAGTAAGCGGACTTCGTATGCAACTCCCCTGGCTAAATGGCATTATTAATTAGCTCGTAGTTTGTCGAGAATATGGATTCAGTAGTGTATGGTGTGCATTTCTGTTCCCTTGCATTGCAGTGATAAACAGGCTGAATGTATTGAAAGAGGGATTAGAATTCGTAATCTGACTTACTGCTGTCTTTGTGTTTGCCTCAAAATCATTGTTCTTGTTGTGTTAAGTTGAACACGTGACTGCTTTTGTTGGCTTCTCTTATTGAGTTGTATGTCTTTTGTGCGCATTCTTTTTCTCCAGGATTTCCAGGGATTTTTGAATGATTTGCAGGATTGGGAACTCTCCCTTAAGGGAAAAGACAAGAAATTGAAGCCACAGGCCATTGTTAAAGAAAGGAGGTATTACTCTATCACACTTTCAGTTGGATAGCGAAATGCACATTTTAAAACGCAAAACTGCTATGTAGGATGGTAATATTTATATTGATTTATGTATATGAGGATGATAGTTAGTGCGCACACACACCAAAATAACAATAATAATGAAATAAAATAAACCCGGTGCTCTAATATCCTACGAGTTACCTTGATAACTAAATGTAGTAGGGTCAGACGGTTGTCCCGTGAGATTAGTTGAGGTACGCGTAAGCTGGCCGGACACTCACAGATAAAAAAAAAAAAAAAAACACGGTGCCCAGTTTTGTTGTCTTGCTGCATCTTGTTCAAATTATTAGATTTAATTGCTTATTCATTGAGGTGTTTAAATTTTTTGTAAGGGTAGATACATTAATAGTAATTTTTATACTCTTGTATTGAAATTGGTATTATGCATAGTAGAATCATGCATTTGTGTTTATTTCAAAATTTTGAAACTTTGATTCTAGAGAGTTATGTCATTACATTTTTTGAGTAATAATAAATGCTTGATACTATTATGGACTATTTGAGGGGCACCTTAGAGAGATGTCATAGCTATCCAGGGTAGAAGGCAGGCAGAAAAAGCTTCATCAGCTGATTACTTGAAGCACTATGATGCAGTTAACCGTCTATCAAGAAATTTTCAGACGGAACAGAGTTTTGCTGATTCTGCTTCAGAGAAAGAACAGGTAAGTTATATTCTTTTGGTCTCGTTTTTATGATAGAGGCACAATTGGTGCAACCATGAAATAACTCGACTCTTGACACGTGGTTGTGTATAATATATCTTAATATTCCAGGGTAATGAGTTTTTTAAGCAGAAGAAGTTTAAAGAAGCTATTGACTGCTATTCAAGAAGTATTGCTTTGTCACCAACGGCTGTAGCCTTTGCAAATAGGGCCATGGCCTACCTAAAAATTAGAAGGCGAGTTTCAGTCAGTAGACTCAAAGCTTTCCTTTAATTTGATGCATACGTTGGGAATTTGTTTACAATATTTCTTGAAATTGTAATATCGCACCTTTGTTTCTAAGTAATTTTCTGCTATAAGCTGTTTACCAATTAATTAGTGCTCTTGATGTCTTTGACTATTAAATGTGTTAAAATTGTTGCTTTCTTTGTTATCCTCTTGTTTCCACCTCCCTTGAGTCAGATTTCAGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGATCGATATATTAAAGCATATTCACGCCGAGCAACAGCTAGAAAGGAACTCGGGAAAGCTAAAGAAGCCTTGGAGGGTATAAAAATCAATATATTAATTGCACTGGATCATTTTATGATTTTTGTCCATCTGATATATTTGACTTTGCTGATTGCAGATGCTGAATTTGCCCAGAGGTTGGAGCCTCACAACCCAGAGATCAAGAAGCAACATGCTGAGCTCAGAGCTTTTGTTGGGAAAGTAAGTTTTGCAGCATCAATATTTCAGATGATATTTGATAAATAATTCTTGAGCTATATGGAGGTCATGACAATAATATACTGGTGATTGAAAATGGAGAGAGAGTGCTGTTATTATGACACCCAGTTTGACAGACGATGATGTTTTGTTGACAAGATAATTTTATTTAATCTTTCTTGTACGTGTATCCATCTACTCAGGCAATTCTTGAGAAGGCATCTGGTGCATCGAGAAGCTCCAGACAGGATAAGGAGATGGTTGGAAAATCCAACTCGGAAGCAAAAATTCAGGACATTCATCCTGTCTTAAGCAGCACACTAAGGACAGGATTACCGGCAGCTCAGAACACATTGAAGTAAGGAATACTAATTTATCGTTGCCTCCCGTATTTTCTCATAAAATAAATGTAATACTGTAATTTTTCAATGAAGATCCAATAGTACAACCTTAGTTTTTAATAATAGACATTCAACATATCACTCACTCTCGTCTTTCTCAAGTTTTCTGGAAACTATATTTTGTTGTAATATAAAACAATACCAATGTAGCACTACTTTATAACTCCCTTGTCCTGTTCTGGGTTGTAGGAGTGCGGTTTAGTTCATTCCTTTGTTGAAATACTCAATGGAGAGAAAAATTGCTGATAATTAATCACTTATACTGCTTGTATCTGGCTGTAGTGTCATTTTCTGTAATTGTATTGACTATTGAGTTTCTTTCCTCAAATGGACTAATACGATTGATTTCTTTGCAAGTTTTCCAGTTTTTCATTAATGTTCATTTAATGTAACTGATTGAAGCAAACTGGTAGTGCACGTTCGCCACCCCTGTTGTAATGGAATCTAAAGGTAATGATGCTTATTCTGAAGCGGGATTCGGAATATGATGTTTGAGCTTTTGCGCTCTATTCTTAGGAAAATGGTGGGCAAAAAGCTGTTAAGGCATCAGCTCGTTTAGAGGAAACCGAGGACAGAAGTATGGGAGCTGAAATCAGATACAAAAGAGAAGCAACAAATGGTTTTCACAAAGATGCCATCCCAAGTTCGAATTTGGGGGCATTGGAGGTCTCTTAAGATCCAATTAAACTCTTTTTTCTGCCTTGTACACTGTCTTACGCTTGTTGGTTCCCATTTATATGTTAGTATATACCATTGTTTGTTCAAAAGAAACACAAATAAGATTGCTGCAATAGTTCTTGAGCGCAAACCAATGCAGGGTTCATCTAAAAAATGTCATTGAAATCAAATAGAAGTTTGCTTATTTTCCTATTGGGTTGTTTCCATCACATCCTGTGCATTGTGCAGTGAGCATTCTATAACTCTTGCTTTTGAAACTTTCTTGACTGAAAAAAAAAGGTAAAAGAAAATGAAGTTCTCATGCTGATATTGACCCTTTTTGTAAAGAATCTATGATCTATTATAAGAATCAATTAAATTTGAGATGTTGTATATAGACAGCCAGTTCTCTTAAGAGCTGCAATTGGTAAGAGGCTTCAGTTAAGTCATTCATTCACTGAGTACCAAGCTTGAGAGAGCATTTTTGAAGCCTATCAATTGAGGGCCTTACTACAAAGTCACCTTTACTAATCAACCCAAGCCTCTTCCATGACTCAAAATCCAATAGTCCAATCCTATGTTCAAGCATGCCTCGATCATTCTCCTTTCCTTAAAAAATATCCCTTCCCCCATTGAAAGGCACATCCTAGGTGACTGAATATGAGACTTCTAGCTTAATATTGACTGATGTAGGTCAGATGCAACCAATTCTCCCAAAAGTTGTGGCTAAGATGAAAGTCAATGTCAAACATACATTTATTCAAACCTAGGCATAAGTGCACTCTTTCAGCCTGGGGCGTTACTTTGAGGTCATCCCTTCTTGAGGCATTACTATGAAGGTAATCCCTTACTGACAAGCTCAAGCCTTATTCAAGACTCAAAAACCAATAGATCACCTTCGTGATTAATCAAATTAAAGCTCGTCCATTTAAAGTTTTGAAGTTCCAAGAGGACTCTATATCATAGCGTGAGCAGGATAGGGGGATAGATGACAGGCTTCTACTTAACCTTTTCTCCCACCCTTTTTCACTTTTCCCCTTTATCAATTTGTGAACCATGTAATCAGCTCACGCTCATTAAATGCCATAGCCTATTTCCCATGTGTTTTTGCGTTTAATTCTTTCTGTCACAATTATGTCTCTGCCGTATATTCTTTTGTTTTCACACTTACACTACTCTGCTGCCAATATTTACACAGAGACATGTTACGAGAAAGCAGGAACTGAAGCCGTCAGTGCAGGAACTTGCTTCTCGAGCAGCTTCTAGAAGTATGGTTGAAGCTGCAAAAAACATCACAGCCCCAACTACTGCCTATCAATTCGAAGTTTCTTGGCGAGGATTCTCTGGTGATCGTGCACTGCAGGCTCGTCTTTTGAAGGTATGTGATATAGACTGACAATGCCGTCAATGGTATTGTGTTATTTTGGTTTGGCTATCCAAGATAATATAAATAAATGGTATTTGCGTACATATAAAAATTGTTGTCTGAGTACCAAGCTTGAAGTGTGCGGCCATATTAAAGACTGGTTTGTCAATTGGTCAGTGAATTGTTTGATCTTTTTTCATCATATGATCATCAATTTGTTTTTCAATGGAAAACCCCTAGAGATCACTTACGAAGTGTATTAAGTAACGCTAGTCTTGACTACCCAATATTGTAGGTCATATAGGTGTCTCCAGTTTTGTATCTGTTGAATCATCAATTGGCTGATATATTTAGGAAAAAAAAAAAACACTCCTTTTCATTTTGTGGTAGTGAGCACTCTGCATATTGGCATGGCATTGGCGAAATTTCACTTCGTAGTAAATGAATGTATTGGGAAATCCATTGAGCCCAAAGTACTTGGCATTTTATTCGGCTCCTTTCCACAGTTCTTTTTATTTTTTTTAACGCAATTGTTTTTCTTATTAGGCCATCTCTCCAGTCATGTTGCCTCAGATATTAAAAAATGCATTAACAGCTCCAATATTAATAGACATTGTCAAGTGCGTGGCTACCTTTTTCACGTAAGTTGAGAATTTTAATTTGTCCTGAGTGAACATTTAGAAATATCATTTAGAACATCAATGGCTAACATACCATACTGGCTTATCAATATGCAGTGAAGAGATGGCATTGGCTATCAGTTTTTAGAAAATTTAACTAAGGTCCCAAGATTCAGCATACTCATGATGTGTCTTCCATCCTCTGAAAAGTTTGGTAAGTTGTTGAAACCCTTCCCTCTTTACCGCCCTTCTTGCATGGTAACCTCCATTTAGTACATTTTTTACCCCTATATTCTGAGTTCGGTACGTTCTATGAACCCCCCACCCCCACCACCTTTTAATTCGTCTTGGTGGGGAGAAATTAGGTTTTGTTAGGAACTGAAATGTATGTCCACACACAGCCCCCAAAATAATAACAGAAATCCAGAAATCTTAGGGCTTATCGTGGCGAGTGTTTTATTTATTTGTACACTATCTAATTGTAAAGCTTTGTGAAACAGATCTCCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCTGTTCCTATTGAGTATGCAGAAACGCTCGATAGCTTGCGTCAAAGTACTTTCTTAAACAATGACATGTTTCTTGAATGAGAAGAAGCACGTTGTCTTCAAACTCTGCCTTTCCTAAGCCAACCTAGCTGCATGTGCATCCTCTGTGTAAAGTATCCAATTACTCCTCACGCAATGAAGTTAATGTTATGAAAATTGTCTTATTCTAGTGCAATGGCAATCAACTGTCAATTCTTTTCCATAACGTTTCCAACATGCTTGAAAATTTTCAGAATTTGCTCGGTAGAAGTCTCGGCTCGAATTGATCAACACTTCTGAACTCAATGAACATAAAAGTTTTCATGACCAGAAGAATAGTTAACTGGTTCATAGAATTGGTATATTGAACCGTAGGGTAGTGCCTTAGATAGGGTTCAGTTGCCCCATGTTGTGTTGTGGTGCACTGCCACATGCAGGAGGACAATTGAATGGCCCATTTCCATTCATCTGGACCATCCTCAACTCAAAAGTCTTTATGTGAATATGTAG

mRNA sequence

ATGGGGAACAACATAGAGCTAGTTAGAAACGGAGATCATGAACCAATATCAGAGACAAAACACTCTATTCAGTTCATGTCAGAGACATTACATCCAAAACGGAGGAGAACCACAAATCCAAAAGTGTGGGAGGTCGAATCCGAGCAAGAGGAGCATTCTTTATCATTGTCCCAGCACTCATCACCATCACAATCAGATCAAGAACAGACCCCAGTCCGAAAAGTCTCTGACTCAGTAACAAGTTCCCAAGGATTACGACTTCTTAAGCACGTGAGTCAGAGCTCAACTAGCGAACCTTACAGCATTTCTAGAACCCAACCCGAGTTCAGAAATGCTGTCCAAAGCGCTTCGCCACAAGATCATCCGTATTTCGGACACCAGAACCAGCTAAAGCCTGAACAGCAGCAGCTTCTCCATGTTGTTCGCCCAGTGAAAGAACACAAGTCCTTGGAGACCGGCCTCGTCCAGAACCTGATTGGATCGGAGGTTCGAGGAAGAGTCGACGGGGCTTTCGACTCTGGCTTCCTAATGACTGCTACTGTCAATGGGAAAATATACAGAGGTGTCCTGTTCACACCCGGACCTGGGGTCTTCTCAAGGGCCACCATTGTTGCAGAGAATCCACTTCTTCCAGCAAACACACTCCCAAACTCGAATCACGTAGAACCGTCCAAGACCTTGCAGCATCGACCGTTGGTTCCGATGCCCGAGTCTGCTCAGAGCTTCAGGCAAGCTCAACTCAGTCCTCCAGTTCCAATCATAAAACCCACTCCATCTTCATTACCAGTCAAGCTTAGAGATGATCTTCAGGGTGTCAAAAATAAAATTAAAAAAAATGAAAAAAAAAAAGCAAGAGAACGGGGTCGGTGTCAGCTGTCTGATCTGTCTGCCACTTGGGATTCACAGATTTTGTATCCATGGCGAAGACCCGACCGGAGGGGACTGCTTTCGGCCGACGCTCCGAGGCTTTGGACGCTTCGAGAAGCACTCCGAGACCTCGTTAAGCTAGAATCTCCGTTCTCTTTCTTCGTTTTCATTTCGTTTGGTCTCCAATGGCCGAGCCCTCTGGCAAGCACGGGCGTGATCATTGAGCGTCCTGTTGCTGCATATCGACGCATTGATAGGAAAAACAGTATGATTCGTTGTCTGTGGAATAGTGTATGGTGTGCATTTCTGTTCCCTTGCATTGCAGTGATAAACAGGCTGAATGTATTGAAAGAGGGATTAGAATTCGATTTCCAGGGATTTTTGAATGATTTGCAGGATTGGGAACTCTCCCTTAAGGGAAAAGACAAGAAATTGAAGCCACAGGCCATTGTTAAAGAAAGGAGAGATGTCATAGCTATCCAGGGTAGAAGGCAGGCAGAAAAAGCTTCATCAGCTGATTACTTGAAGCACTATGATGCAGTTAACCGTCTATCAAGAAATTTTCAGACGGAACAGAGTTTTGCTGATTCTGCTTCAGAGAAAGAACAGGGTAATGAGTTTTTTAAGCAGAAGAAGTTTAAAGAAGCTATTGACTGCTATTCAAGAAGTATTGCTTTGTCACCAACGGCTGTAGCCTTTGCAAATAGGGCCATGGCCTACCTAAAAATTAGAAGATTTCAGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGATCGATATATTAAAGCATATTCACGCCGAGCAACAGCTAGAAAGGAACTCGGGAAAGCTAAAGAAGCCTTGGAGGATGCTGAATTTGCCCAGAGGTTGGAGCCTCACAACCCAGAGATCAAGAAGCAACATGCTGAGCTCAGAGCTTTTGTTGGGAAAGCAATTCTTGAGAAGGCATCTGGTGCATCGAGAAGCTCCAGACAGGATAAGGAGATGGAAAATGGTGGGCAAAAAGCTGTTAAGGCATCAGCTCGTTTAGAGGAAACCGAGGACAGAAGTATGGGAGCTGAAATCAGATACAAAAGAGAAGCAACAAATGGTTTTCACAAAGATGCCATCCCAAGTTCGAATTTGGGGGCATTGGAGAGACATGTTACGAGAAAGCAGGAACTGAAGCCGTCAGTGCAGGAACTTGCTTCTCGAGCAGCTTCTAGAAGTATGGTTGAAGCTGCAAAAAACATCACAGCCCCAACTACTGCCTATCAATTCGAAGTTTCTTGGCGAGGATTCTCTGGTGATCGTGCACTGCAGGCTCGTCTTTTGAAGATCTCCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCTGTTCCTATTGAGTATGCAGAAACGCTCGATAGCTTGCGTCAAAGGTAGTGCCTTAGATAGGGTTCAGTTGCCCCATGTTGTGTTGTGGTGCACTGCCACATGCAGGAGGACAATTGAATGGCCCATTTCCATTCATCTGGACCATCCTCAACTCAAAAGTCTTTATGTGAATATGTAG

Coding sequence (CDS)

ATGGGGAACAACATAGAGCTAGTTAGAAACGGAGATCATGAACCAATATCAGAGACAAAACACTCTATTCAGTTCATGTCAGAGACATTACATCCAAAACGGAGGAGAACCACAAATCCAAAAGTGTGGGAGGTCGAATCCGAGCAAGAGGAGCATTCTTTATCATTGTCCCAGCACTCATCACCATCACAATCAGATCAAGAACAGACCCCAGTCCGAAAAGTCTCTGACTCAGTAACAAGTTCCCAAGGATTACGACTTCTTAAGCACGTGAGTCAGAGCTCAACTAGCGAACCTTACAGCATTTCTAGAACCCAACCCGAGTTCAGAAATGCTGTCCAAAGCGCTTCGCCACAAGATCATCCGTATTTCGGACACCAGAACCAGCTAAAGCCTGAACAGCAGCAGCTTCTCCATGTTGTTCGCCCAGTGAAAGAACACAAGTCCTTGGAGACCGGCCTCGTCCAGAACCTGATTGGATCGGAGGTTCGAGGAAGAGTCGACGGGGCTTTCGACTCTGGCTTCCTAATGACTGCTACTGTCAATGGGAAAATATACAGAGGTGTCCTGTTCACACCCGGACCTGGGGTCTTCTCAAGGGCCACCATTGTTGCAGAGAATCCACTTCTTCCAGCAAACACACTCCCAAACTCGAATCACGTAGAACCGTCCAAGACCTTGCAGCATCGACCGTTGGTTCCGATGCCCGAGTCTGCTCAGAGCTTCAGGCAAGCTCAACTCAGTCCTCCAGTTCCAATCATAAAACCCACTCCATCTTCATTACCAGTCAAGCTTAGAGATGATCTTCAGGGTGTCAAAAATAAAATTAAAAAAAATGAAAAAAAAAAAGCAAGAGAACGGGGTCGGTGTCAGCTGTCTGATCTGTCTGCCACTTGGGATTCACAGATTTTGTATCCATGGCGAAGACCCGACCGGAGGGGACTGCTTTCGGCCGACGCTCCGAGGCTTTGGACGCTTCGAGAAGCACTCCGAGACCTCGTTAAGCTAGAATCTCCGTTCTCTTTCTTCGTTTTCATTTCGTTTGGTCTCCAATGGCCGAGCCCTCTGGCAAGCACGGGCGTGATCATTGAGCGTCCTGTTGCTGCATATCGACGCATTGATAGGAAAAACAGTATGATTCGTTGTCTGTGGAATAGTGTATGGTGTGCATTTCTGTTCCCTTGCATTGCAGTGATAAACAGGCTGAATGTATTGAAAGAGGGATTAGAATTCGATTTCCAGGGATTTTTGAATGATTTGCAGGATTGGGAACTCTCCCTTAAGGGAAAAGACAAGAAATTGAAGCCACAGGCCATTGTTAAAGAAAGGAGAGATGTCATAGCTATCCAGGGTAGAAGGCAGGCAGAAAAAGCTTCATCAGCTGATTACTTGAAGCACTATGATGCAGTTAACCGTCTATCAAGAAATTTTCAGACGGAACAGAGTTTTGCTGATTCTGCTTCAGAGAAAGAACAGGGTAATGAGTTTTTTAAGCAGAAGAAGTTTAAAGAAGCTATTGACTGCTATTCAAGAAGTATTGCTTTGTCACCAACGGCTGTAGCCTTTGCAAATAGGGCCATGGCCTACCTAAAAATTAGAAGATTTCAGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGATCGATATATTAAAGCATATTCACGCCGAGCAACAGCTAGAAAGGAACTCGGGAAAGCTAAAGAAGCCTTGGAGGATGCTGAATTTGCCCAGAGGTTGGAGCCTCACAACCCAGAGATCAAGAAGCAACATGCTGAGCTCAGAGCTTTTGTTGGGAAAGCAATTCTTGAGAAGGCATCTGGTGCATCGAGAAGCTCCAGACAGGATAAGGAGATGGAAAATGGTGGGCAAAAAGCTGTTAAGGCATCAGCTCGTTTAGAGGAAACCGAGGACAGAAGTATGGGAGCTGAAATCAGATACAAAAGAGAAGCAACAAATGGTTTTCACAAAGATGCCATCCCAAGTTCGAATTTGGGGGCATTGGAGAGACATGTTACGAGAAAGCAGGAACTGAAGCCGTCAGTGCAGGAACTTGCTTCTCGAGCAGCTTCTAGAAGTATGGTTGAAGCTGCAAAAAACATCACAGCCCCAACTACTGCCTATCAATTCGAAGTTTCTTGGCGAGGATTCTCTGGTGATCGTGCACTGCAGGCTCGTCTTTTGAAGATCTCCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCTGTTCCTATTGAGTATGCAGAAACGCTCGATAGCTTGCGTCAAAGGTAGTGCCTTAGATAGGGTTCAGTTGCCCCATGTTGTGTTGTGGTGCACTGCCACATGCAGGAGGACAATTGAATGGCCCATTTCCATTCATCTGGACCATCCTCAACTCAAAAGTCTTTATGTGAATATGTAG

Protein sequence

MGNNIELVRNGDHEPISETKHSIQFMSETLHPKRRRTTNPKVWEVESEQEEHSLSLSQHSSPSQSDQEQTPVRKVSDSVTSSQGLRLLKHVSQSSTSEPYSISRTQPEFRNAVQSASPQDHPYFGHQNQLKPEQQQLLHVVRPVKEHKSLETGLVQNLIGSEVRGRVDGAFDSGFLMTATVNGKIYRGVLFTPGPGVFSRATIVAENPLLPANTLPNSNHVEPSKTLQHRPLVPMPESAQSFRQAQLSPPVPIIKPTPSSLPVKLRDDLQGVKNKIKKNEKKKARERGRCQLSDLSATWDSQILYPWRRPDRRGLLSADAPRLWTLREALRDLVKLESPFSFFVFISFGLQWPSPLASTGVIIERPVAAYRRIDRKNSMIRCLWNSVWCAFLFPCIAVINRLNVLKEGLEFDFQGFLNDLQDWELSLKGKDKKLKPQAIVKERRDVIAIQGRRQAEKASSADYLKHYDAVNRLSRNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKKQHAELRAFVGKAILEKASGASRSSRQDKEMENGGQKAVKASARLEETEDRSMGAEIRYKREATNGFHKDAIPSSNLGALERHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDRALQARLLKISSRFGMKYFVMRLFLLSMQKRSIACVKGSALDRVQLPHVVLWCTATCRRTIEWPISIHLDHPQLKSLYVNM

Homology

[Close]

BLAST of Sgr020456 vs. NCBI nr
Match: XP_022156426.1 (RNA polymerase II-associated protein 3 [Momordica charantia])

HSP 1 Score: 516.2 bits (1328), Expect = 5.2e-142
Identity = 288/357 (80.67%), Postives = 300/357 (84.03%), Query Frame = 0


Query: 412 DFQGFLNDLQDWELSLKGKDKKLKPQAIVKERRDVIAIQGRRQAEKASSADYLKHYDAVN 471
           DFQGFLND+QDWELSLKGKDKKLKPQA  KE+      +GRR+AEKAS+ADYLKHYDAVN
Sbjct: 15  DFQGFLNDMQDWELSLKGKDKKLKPQAFGKEK------EGRRRAEKASAADYLKHYDAVN 74

Query: 472 RLSRNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 531
            LSRNFQTEQSF D+ASEKE+GNE+FKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK
Sbjct: 75  HLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 134

Query: 532 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKK 591
           I+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHN EIKK
Sbjct: 135 IKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKK 194

Query: 592 QHAELRAFVGKAILEKASGASRSSRQDKEM------------------------------ 651
           QHAELRAFVGK+ILEKASGASRSS QDKE                               
Sbjct: 195 QHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQE 254

Query: 652 ---ENGGQKAVKASARLEETEDRSMGAEIRYKREATNGFHKDAIPSSNLGALER-HVTRK 711
              EN  QKAVKAS RL++TEDRSM AEIRYKREATNGFHKDA PS NLG LER HVTRK
Sbjct: 255 HIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGLERNHVTRK 314

Query: 712 QELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDRALQARLLKISS 735
           QELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGD ALQARLLK  S
Sbjct: 315 QELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAIS 365

[Close]

BLAST of Sgr020456 vs. NCBI nr
Match: XP_038890655.1 (RNA polymerase II-associated protein 3 isoform X3 [Benincasa hispida])

HSP 1 Score: 489.6 bits (1259), Expect = 5.2e-134
Identity = 276/354 (77.97%), Postives = 288/354 (81.36%), Query Frame = 0


Query: 412 DFQGFLNDLQDWELSLKGKDKKLKPQAIVKERRDVIAIQGRRQAEKASSADYLKHYDAVN 471
           DFQGFLNDLQDWELS KGKDKKLKPQAI KE+      +GRRQ EKAS+ADYLKHYDAVN
Sbjct: 15  DFQGFLNDLQDWELSFKGKDKKLKPQAISKEK------EGRRQTEKASAADYLKHYDAVN 74

Query: 472 RLSRNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 531
           RLSRNFQT+QSF D+ASEKEQGNE+FKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK
Sbjct: 75  RLSRNFQTDQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 134

Query: 532 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKK 591
           IRR+QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDA+FAQRLEPHN EIKK
Sbjct: 135 IRRYQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDADFAQRLEPHNQEIKK 194

Query: 592 QHAELRAFVGKAILEKASGASRSSRQDKEM------------------------------ 651
           QHAELRAFVGKAILEKASGASRSS +DKE                               
Sbjct: 195 QHAELRAFVGKAILEKASGASRSSTKDKETVRKSDSEAKIKDIPPVSSSTPRTGLSAARE 254

Query: 652 ---ENGGQKAVKASARLEETEDRSMGAEIRYKREATNGFHKDAIPSSNLGALERH-VTRK 711
              ENGG+ A K SA LEE EDRS GAEI YK+ ATNGFHKD+  SS  G LER  V RK
Sbjct: 255 RVDENGGENAAKTSAYLEENEDRSTGAEIAYKKVATNGFHKDS--SSYAGELERDCVPRK 314

Query: 712 QELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDRALQARLLK 732
           QELKPSVQE AS AASRSMVEAAKNI APTTAYQFEVSWRGFSGDR LQARLLK
Sbjct: 315 QELKPSVQEFASLAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRGLQARLLK 360

[Close]

BLAST of Sgr020456 vs. NCBI nr
Match: XP_038890654.1 (RNA polymerase II-associated protein 3 isoform X2 [Benincasa hispida])

HSP 1 Score: 488.8 bits (1257), Expect = 8.9e-134
Identity = 276/356 (77.53%), Postives = 288/356 (80.90%), Query Frame = 0


Query: 412 DFQGFLNDLQDWELSLKGKDKKLKPQAIVKERRDVIAIQGRRQAEKASSADYLKHYDAVN 471
           DFQGFLNDLQDWELS KGKDKKLKPQAI KE+      +GRRQ EKAS+ADYLKHYDAVN
Sbjct: 15  DFQGFLNDLQDWELSFKGKDKKLKPQAISKEK------EGRRQTEKASAADYLKHYDAVN 74

Query: 472 RLSRNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 531
           RLSRNFQT+QSF D+ASEKEQGNE+FKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK
Sbjct: 75  RLSRNFQTDQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 134

Query: 532 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKK 591
           IRR+QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDA+FAQRLEPHN EIKK
Sbjct: 135 IRRYQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDADFAQRLEPHNQEIKK 194

Query: 592 QHAELRAFVGKAILEKASGASRSSRQDKE------------------------------- 651
           QHAELRAFVGKAILEKASGASRSS +DKE                               
Sbjct: 195 QHAELRAFVGKAILEKASGASRSSTKDKETVRKSDSEAKIKDIPPVSSSTPRTGLSAARE 254

Query: 652 ----MENGGQKAVKASARLEETEDRSMGAEIRYKREATNGFHKDAIPSSNLGALERH-VT 711
                ENGG+ A K SA LEE EDRS GAEI YK+ ATNGFHKD+  SS  G LER  V 
Sbjct: 255 RVDVKENGGENAAKTSAYLEENEDRSTGAEIAYKKVATNGFHKDS--SSYAGELERDCVP 314

Query: 712 RKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDRALQARLLK 732
           RKQELKPSVQE AS AASRSMVEAAKNI APTTAYQFEVSWRGFSGDR LQARLLK
Sbjct: 315 RKQELKPSVQEFASLAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRGLQARLLK 362

[Close]

BLAST of Sgr020456 vs. NCBI nr
Match: KAG7021040.1 (RNA polymerase II-associated protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 488.8 bits (1257), Expect = 8.9e-134
Identity = 277/357 (77.59%), Postives = 292/357 (81.79%), Query Frame = 0


Query: 412 DFQGFLNDLQDWELSLKGKDKKLKPQAIVKERRDVIAIQGRRQAEKASSADYLKHYDAVN 471
           DFQGFLNDLQDWELSL G+DKKLKP AI KE+      +G RQ  KA++ADY+KHYDAVN
Sbjct: 15  DFQGFLNDLQDWELSLNGRDKKLKPHAISKEK------EGGRQPVKATAADYMKHYDAVN 74

Query: 472 RLSRNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 531
            LS    TEQSF D+ASEKEQGNE+FKQKKFKEAI CYSRSIALSPTAVAFANRAMAYLK
Sbjct: 75  SLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFANRAMAYLK 134

Query: 532 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKK 591
           IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+N EIKK
Sbjct: 135 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKK 194

Query: 592 QHAELRAFVGKAILEKASGASRSSRQDKEM------------------------------ 651
           QHAELRAFVGKAILEKASGASRSS ++K+M                              
Sbjct: 195 QHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLRSGLSAAQE 254

Query: 652 ---ENGGQKAVKASARLEETEDRSMGAEIRYKREATNGFHKDAIPSSNLGALER-HVTRK 711
              ENGG+KAVK SARLE TE RS GAEIRYKREATNG HKD  P+SNLGALER HV+RK
Sbjct: 255 HVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKD--PNSNLGALERNHVSRK 314

Query: 712 QELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDRALQARLLKISS 735
           QELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGDRALQARLLK  S
Sbjct: 315 QELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLKAIS 363

[Close]

BLAST of Sgr020456 vs. NCBI nr
Match: XP_038890653.1 (RNA polymerase II-associated protein 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 488.0 bits (1255), Expect = 1.5e-133
Identity = 277/364 (76.10%), Postives = 289/364 (79.40%), Query Frame = 0


Query: 412 DFQGFLNDLQDWELSLKGKDKKLKPQAIVKERRDVIAIQGRRQAEKASSADYLKHYDAVN 471
           DFQGFLNDLQDWELS KGKDKKLKPQAI KE+      +GRRQ EKAS+ADYLKHYDAVN
Sbjct: 15  DFQGFLNDLQDWELSFKGKDKKLKPQAISKEK------EGRRQTEKASAADYLKHYDAVN 74

Query: 472 RLSRNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 531
           RLSRNFQT+QSF D+ASEKEQGNE+FKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK
Sbjct: 75  RLSRNFQTDQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 134

Query: 532 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKK 591
           IRR+QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDA+FAQRLEPHN EIKK
Sbjct: 135 IRRYQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDADFAQRLEPHNQEIKK 194

Query: 592 QHAELRAFVGKAILEKASGASRSSRQDKE------------------------------- 651
           QHAELRAFVGKAILEKASGASRSS +DKE                               
Sbjct: 195 QHAELRAFVGKAILEKASGASRSSTKDKETVRKSDSEAKIKDIPPVSSSTPRTGLSAARE 254

Query: 652 ------------MENGGQKAVKASARLEETEDRSMGAEIRYKREATNGFHKDAIPSSNLG 711
                       MENGG+ A K SA LEE EDRS GAEI YK+ ATNGFHKD+  SS  G
Sbjct: 255 RVDVKVSNSLLPMENGGENAAKTSAYLEENEDRSTGAEIAYKKVATNGFHKDS--SSYAG 314

Query: 712 ALERH-VTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDRALQA 732
            LER  V RKQELKPSVQE AS AASRSMVEAAKNI APTTAYQFEVSWRGFSGDR LQA
Sbjct: 315 ELERDCVPRKQELKPSVQEFASLAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRGLQA 370

[Close]

BLAST of Sgr020456 vs. ExPASy Swiss-Prot
Match: Q5ZKQ3 (RNA polymerase II-associated protein 3 OS=Gallus gallus OX=9031 GN=RPAP3 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.8e-21
Identity = 65/150 (43.33%), Postives = 98/150 (65.33%), Query Frame = 0


Query: 454 QAEKASSADYLKHYDAV-NRLSRN----FQTEQSFADSASEKEQGNEFFKQKKFKEAIDC 513
           QA  + S++  +  +AV + L+ N     + EQ    + +EK+ GN +FK+ K++ AI+C
Sbjct: 246 QALSSESSEQKEFEEAVRSELTENERRCIEEEQLKQKAVTEKDLGNGYFKEGKYEAAIEC 305

Query: 514 YSRSIALSPT-AVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG 573
           Y+R IA   T A+  ANRAMAYLKI++++EAE+DCT+AL LD  Y KA++RR  AR  LG
Sbjct: 306 YTRGIAADGTNALLPANRAMAYLKIQKYEEAENDCTQALLLDASYSKAFARRGAARVALG 365

Query: 574 KAKEALEDAEFAQRLEPHNPEIKKQHAELR 598
           K KEA++D E   +LEP N +   +  ++R
Sbjct: 366 KLKEAMQDFEAVLKLEPGNKQAINELTKIR 395

[Close]

BLAST of Sgr020456 vs. ExPASy Swiss-Prot
Match: Q9D706 (RNA polymerase II-associated protein 3 OS=Mus musculus OX=10090 GN=Rpap3 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.8e-21
Identity = 63/129 (48.84%), Postives = 86/129 (66.67%), Query Frame = 0


Query: 480 EQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIRRFQEA 539
           +Q    + +EK+ GN FFK+ K+++AI+CY+R IA   T A+  ANRAMAYLKI+R++EA
Sbjct: 278 QQGRQKAIAEKDLGNGFFKEGKYEQAIECYTRGIAADRTNALLPANRAMAYLKIQRYEEA 337

Query: 540 EDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKKQHAELRA 599
           E DCT+A+ LD  Y KA++RR TAR  LGK  EA +D E    LEP N    KQ A   +
Sbjct: 338 ERDCTQAIVLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGN----KQAATELS 397

Query: 600 FVGKAILEK 608
            + K ++EK
Sbjct: 398 RIKKELIEK 402

[Close]

BLAST of Sgr020456 vs. ExPASy Swiss-Prot
Match: Q9H6T3 (RNA polymerase II-associated protein 3 OS=Homo sapiens OX=9606 GN=RPAP3 PE=1 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 8.1e-21
Identity = 65/159 (40.88%), Postives = 98/159 (61.64%), Query Frame = 0


Query: 454 QAEKASSADYLKHYDAVNRLS----RNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCY 513
           QA  +    Y K  D V + +    +  + +Q+   + SEK++GN FFK+ K++ AI+CY
Sbjct: 246 QALASKENSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDRGNGFFKEGKYERAIECY 305

Query: 514 SRSIAL-SPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 573
           +R IA     A+  ANRAMAYLKI++++EAE DCT+A+ LD  Y KA++RR TAR  LGK
Sbjct: 306 TRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGK 365

Query: 574 AKEALEDAEFAQRLEPHNPEIKKQHAELRAFVGKAILEK 608
             EA +D E    LEP N +   + ++++    K ++EK
Sbjct: 366 LNEAKQDFETVLLLEPGNKQAVTELSKIK----KELIEK 400

[Close]

BLAST of Sgr020456 vs. ExPASy Swiss-Prot
Match: Q28IV3 (RNA polymerase II-associated protein 3 OS=Xenopus tropicalis OX=8364 GN=rpap3 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 9.0e-20
Identity = 59/129 (45.74%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 475 RNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIR 534
           +  + +Q    +  +K+ GN +FK+ K++ AIDCYS+ +    T A+  ANRAMAYLKI+
Sbjct: 273 KQIEIQQRKQQAIMQKDLGNAYFKEGKYEIAIDCYSQGMEADTTNALLPANRAMAYLKIQ 332

Query: 535 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNP----EI 594
           +++EAE DCT A++LD  Y KA++RR TAR  LGK KEA ED E   +L+P N     E+
Sbjct: 333 KYKEAETDCTLAISLDASYCKAFARRGTARIMLGKQKEAKEDFEMVLKLDPGNKQAVLEL 392

Query: 595 KKQHAELRA 599
           +K   ELR+
Sbjct: 393 EKISRELRS 401

[Close]

BLAST of Sgr020456 vs. ExPASy Swiss-Prot
Match: Q6NU95 (RNA polymerase II-associated protein 3 OS=Xenopus laevis OX=8355 GN=rpap3 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.9e-18
Identity = 62/150 (41.33%), Postives = 91/150 (60.67%), Query Frame = 0


Query: 475 RNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIR 534
           +  + +Q    +  +K+ GN +FK+ K++ AI+CYS+ +    T A+  ANRAMAYLKI+
Sbjct: 273 KQIEIQQRKQQAIMQKDLGNAYFKEGKYEIAIECYSQGMEADNTNALLPANRAMAYLKIQ 332

Query: 535 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNP----EI 594
           +++EAE DCT A++LD  Y KA++RR TA   LGK KEA ED E   +L+P N     E+
Sbjct: 333 KYKEAEADCTLAISLDASYCKAFARRGTASIMLGKQKEAKEDFEMVLKLDPGNKQAVLEL 392

Query: 595 KKQHAELRAFVGKAILEKASGASRSSRQDK 620
            K   ELR+      +EK    ++ S Q K
Sbjct: 393 AKISQELRS------IEKDRNGNKDSNQRK 416

[Close]

BLAST of Sgr020456 vs. ExPASy TrEMBL
Match: A0A6J1DUX9 (RNA polymerase II-associated protein 3 OS=Momordica charantia OX=3673 GN=LOC111023318 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 2.5e-142
Identity = 288/357 (80.67%), Postives = 300/357 (84.03%), Query Frame = 0


Query: 412 DFQGFLNDLQDWELSLKGKDKKLKPQAIVKERRDVIAIQGRRQAEKASSADYLKHYDAVN 471
           DFQGFLND+QDWELSLKGKDKKLKPQA  KE+      +GRR+AEKAS+ADYLKHYDAVN
Sbjct: 15  DFQGFLNDMQDWELSLKGKDKKLKPQAFGKEK------EGRRRAEKASAADYLKHYDAVN 74

Query: 472 RLSRNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 531
            LSRNFQTEQSF D+ASEKE+GNE+FKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK
Sbjct: 75  HLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 134

Query: 532 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKK 591
           I+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHN EIKK
Sbjct: 135 IKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKK 194

Query: 592 QHAELRAFVGKAILEKASGASRSSRQDKEM------------------------------ 651
           QHAELRAFVGK+ILEKASGASRSS QDKE                               
Sbjct: 195 QHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQE 254

Query: 652 ---ENGGQKAVKASARLEETEDRSMGAEIRYKREATNGFHKDAIPSSNLGALER-HVTRK 711
              EN  QKAVKAS RL++TEDRSM AEIRYKREATNGFHKDA PS NLG LER HVTRK
Sbjct: 255 HIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGLERNHVTRK 314

Query: 712 QELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDRALQARLLKISS 735
           QELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGD ALQARLLK  S
Sbjct: 315 QELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAIS 365

[Close]

BLAST of Sgr020456 vs. ExPASy TrEMBL
Match: A0A6J1HPT1 (RNA polymerase II-associated protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465531 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 9.6e-134
Identity = 276/357 (77.31%), Postives = 291/357 (81.51%), Query Frame = 0


Query: 412 DFQGFLNDLQDWELSLKGKDKKLKPQAIVKERRDVIAIQGRRQAEKASSADYLKHYDAVN 471
           DFQGFLNDLQDWELSL G+DKKLKP AI KE+      +G RQ  KA++ADY+KHYDA+N
Sbjct: 15  DFQGFLNDLQDWELSLNGRDKKLKPHAISKEK------EGGRQPVKATAADYVKHYDAIN 74

Query: 472 RLSRNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 531
            LS     EQSF D+ASEKEQGNE+FKQKKFKEAI CYSRSIALSPTAVAFANRAMAYLK
Sbjct: 75  SLSTKSHNEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFANRAMAYLK 134

Query: 532 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKK 591
           IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+N EIKK
Sbjct: 135 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKK 194

Query: 592 QHAELRAFVGKAILEKASGASRSSRQDKEM------------------------------ 651
           QHAELRAFVGKAILEKASGASRSS +DK+M                              
Sbjct: 195 QHAELRAFVGKAILEKASGASRSSTKDKKMVGKSDSEAKIQDIPPVSSSTLRSGLSAAQE 254

Query: 652 ---ENGGQKAVKASARLEETEDRSMGAEIRYKREATNGFHKDAIPSSNLGALER-HVTRK 711
              ENGG+KAVK SARLE TE RS GAEIRYKREATNG HKD  P+SNLGALER HV+RK
Sbjct: 255 HVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKD--PNSNLGALERNHVSRK 314

Query: 712 QELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDRALQARLLKISS 735
           QELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGDRALQARLLK  S
Sbjct: 315 QELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLKAIS 363

[Close]

BLAST of Sgr020456 vs. ExPASy TrEMBL
Match: A0A6J1FCA0 (RNA polymerase II-associated protein 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444090 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.3e-133
Identity = 276/357 (77.31%), Postives = 291/357 (81.51%), Query Frame = 0


Query: 412 DFQGFLNDLQDWELSLKGKDKKLKPQAIVKERRDVIAIQGRRQAEKASSADYLKHYDAVN 471
           DFQGFLNDLQDWELSL G+DKKLKP AI KE+      +G RQ  KA++ADY+KHYDAVN
Sbjct: 15  DFQGFLNDLQDWELSLNGRDKKLKPHAISKEK------EGGRQPVKATAADYMKHYDAVN 74

Query: 472 RLSRNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 531
            LS    TEQSF D+ASEKEQGNE+FKQKKFKEAI CYSRSIALSPTAVAFANRAMAYLK
Sbjct: 75  SLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFANRAMAYLK 134

Query: 532 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKK 591
           IRRFQEAEDDCTEALN DDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+N EIKK
Sbjct: 135 IRRFQEAEDDCTEALNFDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKK 194

Query: 592 QHAELRAFVGKAILEKASGASRSSRQDKEM------------------------------ 651
           QHAELRAFVGKAILEKASGASRSS ++K+M                              
Sbjct: 195 QHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLRSGLSAAQE 254

Query: 652 ---ENGGQKAVKASARLEETEDRSMGAEIRYKREATNGFHKDAIPSSNLGALER-HVTRK 711
              ENGG+KAVK SARLE TE RS GAEIRYKREATNG HKD  P+SNLGALER HV+RK
Sbjct: 255 HVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKD--PNSNLGALERNHVSRK 314

Query: 712 QELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDRALQARLLKISS 735
           QELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGDRALQARLLK  S
Sbjct: 315 QELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARLLKAIS 363

[Close]

BLAST of Sgr020456 vs. ExPASy TrEMBL
Match: A0A0A0LGI8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034580 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 3.8e-130
Identity = 272/357 (76.19%), Postives = 289/357 (80.95%), Query Frame = 0


Query: 412 DFQGFLNDLQDWELSLKGKDKKLKPQAIVKERRDVIAIQGRRQAEKASSADYLKHYDAVN 471
           DFQGFLNDLQDWE+S KGKDKKLKPQAI KE+ D      RRQ EKAS+ADY+K YDAVN
Sbjct: 15  DFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKED------RRQTEKASAADYMKQYDAVN 74

Query: 472 RLSRNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 531
           RLSRNFQTE SF D+ASEKEQGNE+FKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK
Sbjct: 75  RLSRNFQTEGSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 134

Query: 532 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKK 591
           IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+N EIKK
Sbjct: 135 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKK 194

Query: 592 QHAELRAFVGKAILEKASGASRSSRQDKEM------------------------------ 651
           QHA+LRAFVGKAILEKASGASRSS ++K+                               
Sbjct: 195 QHADLRAFVGKAILEKASGASRSSTKNKKTLKKSDSDAKIQDIPPVSSSTSRTGLLAARE 254

Query: 652 ---ENGGQKAVKASARLEETEDRSMGAEIRYKREATNGFHKDAIPSSNLGALER-HVTRK 711
              ENGG  AVK SARLEE+ED S GAEI  K+ ATNGFHKD+  SS L ALER H+ RK
Sbjct: 255 RVEENGGGNAVKTSARLEESEDTSSGAEITSKKVATNGFHKDS--SSYLSALERDHLPRK 314

Query: 712 QELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDRALQARLLKISS 735
           QELK SV ELAS+AASRSMVEAAKNI APTTAYQFEVSWRGFSGD+ALQARLLK  S
Sbjct: 315 QELKASVYELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDQALQARLLKTIS 363

[Close]

BLAST of Sgr020456 vs. ExPASy TrEMBL
Match: A0A6J1DS20 (rab9 effector protein with kelch motifs-like OS=Momordica charantia OX=3673 GN=LOC111023325 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 6.5e-130
Identity = 248/272 (91.18%), Postives = 254/272 (93.38%), Query Frame = 0


Query: 1   MGNNIELVRNGDHEPISETKHSIQFMSETLHPKRRRTTNPKVWEVESEQEEHSLSLSQHS 60
           MGNNIELVR GDHE   ETKHSIQ MSETLHPKRRRTTNPKVWEVESEQEEHSLSLSQHS
Sbjct: 362 MGNNIELVRKGDHELKLETKHSIQLMSETLHPKRRRTTNPKVWEVESEQEEHSLSLSQHS 421

Query: 61  SPSQSDQEQTPVRKVSDSVTSSQGLRLLKHVSQSSTSEPYSISRTQPEFRNAVQSASPQD 120
           SPSQSDQEQTPVRKVSDSVTSSQGLRLLKHVS SSTSEP+SISRTQPEFRN VQSA  QD
Sbjct: 422 SPSQSDQEQTPVRKVSDSVTSSQGLRLLKHVSHSSTSEPHSISRTQPEFRNTVQSAPLQD 481

Query: 121 HPYFGHQNQLKPEQQQLLHVVRPVKEHKSLETGLVQNLIGSEVRGRVDGAFDSGFLMTAT 180
            PY GHQNQLKPEQQ LLHVVRPVKE KSLE G++QNLIGSEVRGRVDGAFDSGFLMTAT
Sbjct: 482 LPYLGHQNQLKPEQQPLLHVVRPVKEQKSLEMGIIQNLIGSEVRGRVDGAFDSGFLMTAT 541

Query: 181 VNGKIYRGVLFTPGPGVFSRATIVAENPLLPANTLPNSNHVEPSKTLQHRPLVPMPESAQ 240
           VNGKIYRGVLFTPGPGVFSRATI+AEN  LPANTLPNSNHVE SKTLQHRPLVPMPES Q
Sbjct: 542 VNGKIYRGVLFTPGPGVFSRATIIAENASLPANTLPNSNHVELSKTLQHRPLVPMPESTQ 601

Query: 241 SFRQAQLSPPVPIIKPTPSSLPVKLRDDLQGV 273
           +FRQAQ+SPPVPIIKPTPSSLPVKLRDDLQGV
Sbjct: 602 TFRQAQVSPPVPIIKPTPSSLPVKLRDDLQGV 633

[Close]

BLAST of Sgr020456 vs. TAIR 10
Match: AT1G56440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 293.9 bits (751), Expect = 3.9e-79
Identity = 185/372 (49.73%), Postives = 237/372 (63.71%), Query Frame = 0


Query: 412 DFQGFLNDLQDWELSLKGKDKKLKPQAIVKERRDVIAIQGRRQAEKASSADYLKHYDAVN 471
           DFQGF NDLQDWELSLK KDKK+K Q                +   +   D+ K Y ++ 
Sbjct: 15  DFQGFFNDLQDWELSLKDKDKKIKQQPANSSNPSSETF----RPSGSGKYDFAKKYRSIR 74

Query: 472 RLSRNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 531
            LS +   E S  DS+SEKEQGNEFFKQKKF EAIDCYSRSIALSP AV +ANRAMAYLK
Sbjct: 75  DLSSSLIGE-SLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAVTYANRAMAYLK 134

Query: 532 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKK 591
           I+R++EAE DCTEALNLDDRYIKAYSRRATARKELG  KEA EDAEFA RLEP + E+KK
Sbjct: 135 IKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALRLEPESQELKK 194

Query: 592 QHAELRAFVGKAILEKASGASRSSRQ--------DKEM---------------------- 651
           Q+A++++ + K I+EKA+GA +S+ Q        DK++                      
Sbjct: 195 QYADIKSLLEKEIIEKATGAMQSTAQELLKTSGLDKKIQKPKTEMTSKPVTLVAKTNRDI 254

Query: 652 --------ENGGQKAVKASARLEETEDRSMG----AEIRYKREATNG---FHKDAIPSSN 711
                   E+ G+K ++     E++++ SM      EI   ++ T G   + K+A PS  
Sbjct: 255 VQPVLGSNESSGKKLIENIQPEEKSKEGSMKIPAITEILDSKKVTPGSQSYEKEAKPSDR 314

Query: 712 LGAL----ERHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGD 735
            G      E  V+++ ELKPSVQELA+ AAS +M EA+KNI  P +AY+FE SWR FSGD
Sbjct: 315 NGTQPSGPENQVSKQLELKPSVQELAAHAASLAMTEASKNIKTPKSAYEFENSWRSFSGD 374

[Close]

BLAST of Sgr020456 vs. TAIR 10
Match: AT1G56440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 284.6 bits (727), Expect = 2.4e-76
Identity = 187/390 (47.95%), Postives = 239/390 (61.28%), Query Frame = 0


Query: 412 DFQGFLNDLQDWELSLKGKDKKLKPQAIVKERRDVIAIQGRRQAEKASSADYLKHYDAVN 471
           DFQGF NDLQDWELSLK KDKK+K Q                +   +   D+ K Y ++ 
Sbjct: 15  DFQGFFNDLQDWELSLKDKDKKIKQQPANSSNPSSETF----RPSGSGKYDFAKKYRSIR 74

Query: 472 RLSRNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLK 531
            LS +   E S  DS+SEKEQGNEFFKQKKF EAIDCYSRSIALSP AV +ANRAMAYLK
Sbjct: 75  DLSSSLIGE-SLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAVTYANRAMAYLK 134

Query: 532 IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKK 591
           I+R++EAE DCTEALNLDDRYIKAYSRRATARKELG  KEA EDAEFA RLEP + E+KK
Sbjct: 135 IKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALRLEPESQELKK 194

Query: 592 QHAELRAFVGKAILEKASGASRSSRQ--------DKEM---------------------- 651
           Q+A++++ + K I+EKA+GA +S+ Q        DK++                      
Sbjct: 195 QYADIKSLLEKEIIEKATGAMQSTAQELLKTSGLDKKIQKPKTEMTSKPVTLVAKTNRDI 254

Query: 652 --------ENGGQKAVK-----------------ASARLEE-TEDRSMG----AEIRYKR 711
                   E+ G+K ++                  S  L+E +++ SM      EI   +
Sbjct: 255 VQPVLGSNESSGKKLIENIQPEHRWNFRELISLYLSCYLQEKSKEGSMKIPAITEILDSK 314

Query: 712 EATNG---FHKDAIPSSNLGAL----ERHVTRKQELKPSVQELASRAASRSMVEAAKNIT 735
           + T G   + K+A PS   G      E  V+++ ELKPSVQELA+ AAS +M EA+KNI 
Sbjct: 315 KVTPGSQSYEKEAKPSDRNGTQPSGPENQVSKQLELKPSVQELAAHAASLAMTEASKNIK 374

[Close]

BLAST of Sgr020456 vs. TAIR 10
Match: AT3G17970.1 (translocon at the outer membrane of chloroplasts 64-III )

HSP 1 Score: 92.0 bits (227), Expect = 2.3e-18
Identity = 56/127 (44.09%), Postives = 81/127 (63.78%), Query Frame = 0


Query: 474 SRNFQTEQSFADSASEKEQGNEFFKQKKFKEAIDCYSRSIALSP-TAVAFANRAMAYLKI 533
           S+   T++  A+ A  KE+GN+ FK+K +++AI  YS +I LS   A  ++NRA AYL++
Sbjct: 464 SKKAITKEESAEIA--KEKGNQAFKEKLWQKAIGLYSEAIKLSDNNATYYSNRAAAYLEL 523

Query: 534 RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKKQ 593
             F +AE+DCT+A+ LD + +KAY RR TAR+ LG  K A+ED  +A  LEP+N      
Sbjct: 524 GGFLQAEEDCTKAITLDKKNVKAYLRRGTAREMLGDCKGAIEDFRYALVLEPNNKRASLS 583

Query: 594 HAELRAF 600
              LR F
Sbjct: 584 AERLRKF 588

[Close]

BLAST of Sgr020456 vs. TAIR 10
Match: AT2G42810.1 (protein phosphatase 5.2 )

HSP 1 Score: 81.3 bits (199), Expect = 4.0e-15
Identity = 54/142 (38.03%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 478 QTEQSFADSASE-KEQGNEFFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIRRF 537
           + E S    A E K Q NE FK  K+  AID Y+++I L S  AV +ANRA A+ K+  +
Sbjct: 4   KNENSDVSRAEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEY 63

Query: 538 QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKKQHAE 597
             A  D ++A+ +D RY K Y RR  A   +GK K+AL+D +  +RL P++P+  ++  E
Sbjct: 64  GSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDALKDFQQVKRLSPNDPDATRKLKE 123

Query: 598 LRAFVGKAILEKASGASRSSRQ 618
               V K   E+A     S R+
Sbjct: 124 CEKAVMKLKFEEAISVPVSERR 145

[Close]

BLAST of Sgr020456 vs. TAIR 10
Match: AT2G42810.2 (protein phosphatase 5.2 )

HSP 1 Score: 81.3 bits (199), Expect = 4.0e-15
Identity = 54/142 (38.03%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 478 QTEQSFADSASE-KEQGNEFFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIRRF 537
           + E S    A E K Q NE FK  K+  AID Y+++I L S  AV +ANRA A+ K+  +
Sbjct: 4   KNENSDVSRAEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEY 63

Query: 538 QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNPEIKKQHAE 597
             A  D ++A+ +D RY K Y RR  A   +GK K+AL+D +  +RL P++P+  ++  E
Sbjct: 64  GSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDALKDFQQVKRLSPNDPDATRKLKE 123

Query: 598 LRAFVGKAILEKASGASRSSRQ 618
               V K   E+A     S R+
Sbjct: 124 CEKAVMKLKFEEAISVPVSERR 145

The following BLAST results are available for this feature:

BLAST of Sgr020456 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156426.1	5.2e-142	80.67	RNA polymerase II-associated protein 3 [Momordica charantia]	[more]
XP_038890655.1	5.2e-134	77.97	RNA polymerase II-associated protein 3 isoform X3 [Benincasa hispida]	[more]
XP_038890654.1	8.9e-134	77.53	RNA polymerase II-associated protein 3 isoform X2 [Benincasa hispida]	[more]
KAG7021040.1	8.9e-134	77.59	RNA polymerase II-associated protein 3, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_038890653.1	1.5e-133	76.10	RNA polymerase II-associated protein 3 isoform X1 [Benincasa hispida]	[more]

BLAST of Sgr020456 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZKQ3	2.8e-21	43.33	RNA polymerase II-associated protein 3 OS=Gallus gallus OX=9031 GN=RPAP3 PE=2 SV...	[more]
Q9D706	4.8e-21	48.84	RNA polymerase II-associated protein 3 OS=Mus musculus OX=10090 GN=Rpap3 PE=1 SV...	[more]
Q9H6T3	8.1e-21	40.88	RNA polymerase II-associated protein 3 OS=Homo sapiens OX=9606 GN=RPAP3 PE=1 SV=...	[more]
Q28IV3	9.0e-20	45.74	RNA polymerase II-associated protein 3 OS=Xenopus tropicalis OX=8364 GN=rpap3 PE...	[more]
Q6NU95	2.9e-18	41.33	RNA polymerase II-associated protein 3 OS=Xenopus laevis OX=8355 GN=rpap3 PE=2 S...	[more]

BLAST of Sgr020456 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUX9	2.5e-142	80.67	RNA polymerase II-associated protein 3 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1HPT1	9.6e-134	77.31	RNA polymerase II-associated protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1FCA0	1.3e-133	77.31	RNA polymerase II-associated protein 3 isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A0A0LGI8	3.8e-130	76.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034580 PE=4 SV=1	[more]
A0A6J1DS20	6.5e-130	91.18	rab9 effector protein with kelch motifs-like OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Sgr020456 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56440.1	3.9e-79	49.73	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G56440.2	2.4e-76	47.95	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G17970.1	2.3e-18	44.09	translocon at the outer membrane of chloroplasts 64-III	[more]
AT2G42810.1	4.0e-15	38.03	protein phosphatase 5.2	[more]
AT2G42810.2	4.0e-15	38.03	protein phosphatase 5.2	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 559..579
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 609..637
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..104
None	No IPR available	PANTHER	PTHR47329:SF1	OS05G0129900 PROTEIN	coord: 410..734
None	No IPR available	PANTHER	PTHR47329	OS05G0129900 PROTEIN	coord: 410..734
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 553..586 e-value: 0.15 score: 21.2 coord: 520..552 e-value: 0.082 score: 22.0 coord: 486..519 e-value: 0.0024 score: 27.1
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 486..519 score: 9.4699
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 471..584 e-value: 1.4E-34 score: 120.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 487..602

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr020456.1	Sgr020456.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding