Sgr018795 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr018795
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Protein FLOWERING locus D-like protein
Location	tig00153210: 692353 .. 693051 (-)
RNA-Seq Expression	Sgr018795
Synteny	Sgr018795

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAGTTATACAGAAGAGAAGCATTTCAATCTGGAAAAATGAAAGGTCTGCTATGTATCTCAAGTCTTAAGATATTTGCACGTCTTTTATGTGCAGATTCTCCCCTCGTGTCTGAGTTGTGTTTAACTAACCCTTGATATACAGCATTACTCAAAATGATAGATATGACAAAAATTAGAAGTATTACCAAAATTGAAAAACAGACTCATTAGTTAGCAAGTAATACGTGATACTGTAGAGTCATCAAGTAATACGTATATTGTTTCCGCAGATAGCCAGATCATTGCCACGAATCTGCTTCTTATCTGGTCTCAGCGGAGAGGAAATGATGATGTTCATAGATGCTTTTCCAGAAACTGGTATTGAAAGACTCCCTCTTCTTTTTTCATTTTAAGAAGTTATAATCTTTTAAAATTCAAAAGTATATTTGAAAAATTGCAAATTCTTTACCAGAGAAGCCAAATGAAATCTCTCACTCTCTCTCTCTCTCATCCTAGTACTAGAAGAGCCATCTCATGGATCAGTTAGAAGGTTTCTTATACAATATACTTCAACCAGTGTTCATTTTCTTTTGGTGCAGGACTCAACCTGCTGTATTTGCCGCTCTTGTTCCCAACGGAGCCAATAAACCAGTAGAAGAGTTAATAGAAGAGATTATGGGGGACCATGAAATGATGGCAAGGAAGAATTCCTAG

mRNA sequence

ATGGTGGAGTTATACAGAAGAGAAGCATTTCAATCTGGAAAAATGAAAGGTCTGCTATGTATCTCAAGTCTTAAGATATTTGCACATAGCCAGATCATTGCCACGAATCTGCTTCTTATCTGGTCTCAGCGGAGAGGAAATGATGATGTTCATAGATGCTTTTCCAGAAACTGGACTCAACCTGCTGTATTTGCCGCTCTTGTTCCCAACGGAGCCAATAAACCAGTAGAAGAGTTAATAGAAGAGATTATGGGGGACCATGAAATGATGGCAAGGAAGAATTCCTAG

Coding sequence (CDS)

ATGGTGGAGTTATACAGAAGAGAAGCATTTCAATCTGGAAAAATGAAAGGTCTGCTATGTATCTCAAGTCTTAAGATATTTGCACATAGCCAGATCATTGCCACGAATCTGCTTCTTATCTGGTCTCAGCGGAGAGGAAATGATGATGTTCATAGATGCTTTTCCAGAAACTGGACTCAACCTGCTGTATTTGCCGCTCTTGTTCCCAACGGAGCCAATAAACCAGTAGAAGAGTTAATAGAAGAGATTATGGGGGACCATGAAATGATGGCAAGGAAGAATTCCTAG

Protein sequence

MVELYRREAFQSGKMKGLLCISSLKIFAHSQIIATNLLLIWSQRRGNDDVHRCFSRNWTQPAVFAALVPNGANKPVEELIEEIMGDHEMMARKNS

Homology

[Close]

BLAST of Sgr018795 vs. NCBI nr
Match: KAG2294984.1 (hypothetical protein Bca52824_041653 [Brassica carinata])

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-08
Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 25  KIFAHSQIIATNLLLIWSQRRGNDDVHRCFSRNWTQPAVFAALVPNGANKPVEELIEEIM 84
           ++  +S + A NLLLIW  R         F     +PAVFAA+VPN A+KP+ EL+EEIM
Sbjct: 138 RVKVYSGVAAPNLLLIWFDREEMMMFIDAFPETGLEPAVFAAMVPNSADKPISELMEEIM 197

Query: 85  GDHEMMARKNS 96
           GDHE++    S
Sbjct: 198 GDHELLTGSGS 208

[Close]

BLAST of Sgr018795 vs. NCBI nr
Match: XP_021897706.1 (uncharacterized protein LOC110814535 [Carica papaya] >XP_021897707.1 uncharacterized protein LOC110814535 [Carica papaya])

HSP 1 Score: 65.9 bits (159), Expect = 2.2e-07
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 60  QPAVFAALVPNGANKPVEELIEEIMGDHEMMARKNS 96
           +PAVFAALVPN ANKPV+ELIEEIMGDHEM+ RK S
Sbjct: 172 KPAVFAALVPNSANKPVQELIEEIMGDHEMLTRKKS 207

[Close]

BLAST of Sgr018795 vs. NCBI nr
Match: KAG5239667.1 (Vacuolar acid trehalase [Salix suchowensis])

HSP 1 Score: 65.5 bits (158), Expect = 2.9e-07
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 54  FSRNWTQPAVFAALVPNGANKPVEELIEEIMGDHEMMARKN 95
           F     +PAVFAALVPN A+KP+EELIEEIMGDHEM+A KN
Sbjct: 167 FPETGLEPAVFAALVPNSADKPLEELIEEIMGDHEMLAAKN 207

[Close]

BLAST of Sgr018795 vs. NCBI nr
Match: KAB5544110.1 (hypothetical protein DKX38_012222 [Salix brachista])

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-06
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 54  FSRNWTQPAVFAALVPNGANKPVEELIEEIMGDHEMMARKN 95
           F     +PAVFAALVPN A+KP+EELIEEIMGDHEM+A  N
Sbjct: 167 FPETGLEPAVFAALVPNSADKPLEELIEEIMGDHEMLAANN 207

[Close]

BLAST of Sgr018795 vs. NCBI nr
Match: KCW65460.1 (hypothetical protein EUGRSUZ_G02872 [Eucalyptus grandis])

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 54  FSRNWTQPAVFAALVPNGANKPVEELIEEIMGDHEMMARK 94
           F     +PAVFAALVPN ANKPV+ELIEEIMGDHEM+  K
Sbjct: 173 FPETGLEPAVFAALVPNSANKPVQELIEEIMGDHEMLTGK 212

[Close]

BLAST of Sgr018795 vs. ExPASy TrEMBL
Match: A0A5N5LN78 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_012222 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.3e-07
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 54  FSRNWTQPAVFAALVPNGANKPVEELIEEIMGDHEMMARKN 95
           F     +PAVFAALVPN A+KP+EELIEEIMGDHEM+A  N
Sbjct: 167 FPETGLEPAVFAALVPNSADKPLEELIEEIMGDHEMLAANN 207

[Close]

BLAST of Sgr018795 vs. ExPASy TrEMBL
Match: A0A6N2KG61 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS82330 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.3e-07
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 54  FSRNWTQPAVFAALVPNGANKPVEELIEEIMGDHEMMARKN 95
           F     +PAVFAALVPN A+KP+EELIEEIMGDHEM+A  N
Sbjct: 92  FPETGLEPAVFAALVPNSADKPLEELIEEIMGDHEMLAANN 132

[Close]

BLAST of Sgr018795 vs. ExPASy TrEMBL
Match: A0A2P5DZB7 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_018440 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.9e-07
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 54  FSRNWTQPAVFAALVPNGANKPVEELIEEIMGDHEMMARKN 95
           F     +PAVFAALVPN A+KP++ELIEEIMGDHEM++ KN
Sbjct: 187 FPETGLEPAVFAALVPNSAHKPLQELIEEIMGDHEMLSSKN 227

[Close]

BLAST of Sgr018795 vs. ExPASy TrEMBL
Match: A0A059BIH4 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G02872 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.9e-07
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 54  FSRNWTQPAVFAALVPNGANKPVEELIEEIMGDHEMMARK 94
           F     +PAVFAALVPN ANKPV+ELIEEIMGDHEM+  K
Sbjct: 173 FPETGLEPAVFAALVPNSANKPVQELIEEIMGDHEMLTGK 212

[Close]

BLAST of Sgr018795 vs. ExPASy TrEMBL
Match: A0A7J7C5T5 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW21G01645 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.9e-07
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 54  FSRNWTQPAVFAALVPNGANKPVEELIEEIMGDHEMMARK 94
           F     +PAVFAALVPN ANKPV+ELIEEIMGDHEM+  K
Sbjct: 169 FPETGLEPAVFAALVPNSANKPVQELIEEIMGDHEMLTGK 208

[Close]

BLAST of Sgr018795 vs. TAIR 10
Match: AT3G10405.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: chloroplast; Has 44 Blast hits to 44 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 1.1e-07
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0


Query: 54  FSRNWTQPAVFAALVPNGANKPVEELIEEIMGDHEMMARKNS 96
           F     +P VFAA+VPN A+KP+ EL EEIMGDHE++   +S
Sbjct: 170 FPETGLEPVVFAAMVPNSADKPIFELTEEIMGDHELLTGSSS 211

The following BLAST results are available for this feature:

BLAST of Sgr018795 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG2294984.1	2.0e-08	46.48	hypothetical protein Bca52824_041653 [Brassica carinata]	[more]
XP_021897706.1	2.2e-07	83.33	uncharacterized protein LOC110814535 [Carica papaya] >XP_021897707.1 uncharacter...	[more]
KAG5239667.1	2.9e-07	73.17	Vacuolar acid trehalase [Salix suchowensis]	[more]
KAB5544110.1	1.1e-06	70.73	hypothetical protein DKX38_012222 [Salix brachista]	[more]
KCW65460.1	1.4e-06	72.50	hypothetical protein EUGRSUZ_G02872 [Eucalyptus grandis]	[more]

BLAST of Sgr018795 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr018795 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5N5LN78	5.3e-07	70.73	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_012222 PE=4 SV=1	[more]
A0A6N2KG61	5.3e-07	70.73	Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS82330 PE=4 SV=1	[more]
A0A2P5DZB7	6.9e-07	68.29	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_018440 PE...	[more]
A0A059BIH4	6.9e-07	72.50	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G02872 PE=4 SV...	[more]
A0A7J7C5T5	6.9e-07	72.50	Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW21G01645 ...	[more]

BLAST of Sgr018795 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10405.1	1.1e-07	54.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen d...	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016621	Uncharacterised conserved protein UCP014543	PFAM	PF12646	DUF3783	coord: 59..90 e-value: 1.0E-6 score: 28.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr018795.1	Sgr018795.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0016570	histone modification
biological_process	GO:0009555	pollen development
molecular_function	GO:0016491	oxidoreductase activity