Sgr018559 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr018559
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Pentatricopeptide repeat-containing protein
Location	tig00153206: 177336 .. 179464 (+)
RNA-Seq Expression	Sgr018559
Synteny	Sgr018559

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGAAGTAGGGATGAGGCCTAATGAAGTGACATTTCTTGGTGTGCTGTCTGCCTGTTCCCATACCGGTTTGTCATCTGAAGGATTATATATTCTGGAGTTAATGGAAAAGTGTTATGGTATTGAGCCTAGTTTAGATCATTATGCAGTCTTGATCGATATGTTTGGAAGAAAAAATAGACTTGCTGAAGCATTGGATTTAATAGCTAGAGCACCCAATGGATCAAAACACGTTGGAATATGGGGTGCAGTTCTGGGGGCTTGTCGAATGCCTGAAAATTTGAACCTGGCTATAAGAGCTGCAGAAACTTTGTTTAAGATGGAGCCAGATAATGACGGAATGTATGTATGTATGTAATGTTATCTAATATATTTGCTGCAGCAAGTAGATGGATGGATGCCCATAATGTGAGAAAACTTATGGAGGAAAGAGGTTTCAAGAAGGAAGTAGCATATAGCTGCATAGAAATAAGAAATATAAGACACAAGTTTGTGGCAAGAGATAATTCCCACAGTCAGATGGGTGAGATATATATGAGCTAATGTTTATACTACTAGATCATATGAAAAATTTTGGTTACATGCCAATTGACAACAGTATTTACATTTATGATGGATATGGTATTTGAACTTTGAGCATGATTTATTTGGATGCCGTGGCTCAGTGTTGCAATTGTCTAGACATTGAAAATGTTAGCAATGAATGAATTTGAGGATATGAAAGCTGCAAGATGTTGAAGCTACAAAGCTGAAGAGGACAGATTGCTATCAAGTAGGCGGTCTTTTATTTTATGTTATTTTCCCCACCATATTGATGTGATGTTAATAATTTGGTAAAGTACACTAAAATAAATCGTAAAATTTTGATCTTAAAGTTTTATCAAGTCCTACAGAAAATAAACAGATATTCAGGCATTAATCATTTAATTATAGTTTTTAGCCACACAAGCATATAGGTTTTCCTTTTTGGGTTTTGATTTTTGAATTATTTTCCTTTAAAAAAATTTGGAAATTGCAATAATACCAAACTATTTAGACACACATTCACCTCCCTTTATACGTCATGATTTTAATCAAGGCATTTTTTTTATGACAAACCAAAATTCAGACAAACGAAGAATATAAGTAGTCAATACAAAAAAAAGGAGGAAAGCCCAGTACAAAAGAAGCCTGAACAAGGGAGCCAAACAAAAATGAAAAAAAGGGGCCTAACAGTCAGAGACAAGGGATAATTACAAAACTCTTTGCAAATTAACATAGAACCAATACATTATGGTTTCAGGTTTGAACTAATGTTGGTCGGCACAATCTTTTGTCCTATAGATGAAACTTAGAACCAAATTAAGAAATTCTGTTGACCTTTTTGTTCCGTAGGCATAATCGGGGAGCATGACCTTCCTCTACTTCTTTAAGGAACTAAGTCTCAAATATTTAATGGATGCTCATTAGTATGCTTGTTATTCTAATTATAAAACTACTTTCAGTTAATGAGAGTCTATAGTAACCTTTTTTTTGCAAATTAATCTTCTAAGTAAGTTATGCTGAGAGTGTTCGATCATGGAGTAACAATTTTTCTCTCTCATTGGATAGAAATGCAATTAAATTTTGAAATATTTTACTTTACCCTCCATGCAAAATATTAGATGCTATTTTGGTTGCATATGTTTATACTTGATAAATATTACTTGGCCAGACTGCATATTGTATTTGATTGAGAGATATCTCCTATGAAACGTGACTCTCTGGGGTTCTTCATTTTGGTGCTCTTCTTTCTTTATTGATGACTCTGATCCTTACTTCCTTTTTTGTAATCCTCTAGGAAGATTACTGTTACTGGAACTAAAAGAAATGATGAAGTGCTGCTGTTCTTAATCTAGCCAGAAAAATTTGAGGGTGCAAGGCCTGATCGAGTTTTGTCTTAAGAGTTTGTATGCAGAGATGAAATTCAGAAAAAATTTCTCCCTGAAAGGGAAACATCTTTCCTTTGTCGTGGTTGCTCTTGCATTCACTGTCTTGGTGTTGTGGACCTGGGAAGAAAATCCTTTTCTTACCACTTGTCAATCAGTTCAAGCGTGGTACAGAACTTCTTATGCAGGTATGCTTGCCAATCCCTGTTTAAAAATGTAG

mRNA sequence

ATGATAGAAGTAGGGATGAGGCCTAATGAAGTGACATTTCTTGGTGTGCTGTCTGCCTGTTCCCATACCGGTTTGTCATCTGAAGGATTATATATTCTGGAGTTAATGGAAAAGTGTTATGGTATTGAGCCTAGTTTAGATCATTATGCAGTCTTGATCGATATGTTTGGAAGAAAAAATAGACTTGCTGAAGCATTGGATTTAATAGCTAGAGCACCCAATGGATCAAAACACGTTGGAATATGGGGTGCAGTTCTGGGGGCTTGTCGAATGCCTGAAAATTTGAACCTGGCTATAAGAGCTGCAGAAACTTTGTTTAAGATGGAGCCAGATAATGACGGAATCCAGAAAAATTTGAGGGTGCAAGGCCTGATCGAGTTTTGTCTTAAGAGTTTGTATGCAGAGATGAAATTCAGAAAAAATTTCTCCCTGAAAGGGAAACATCTTTCCTTTGTCGTGGTTGCTCTTGCATTCACTGTCTTGGTGTTGTGGACCTGGGAAGAAAATCCTTTTCTTACCACTTGTCAATCAGTTCAAGCGTGGTACAGAACTTCTTATGCAGGTATGCTTGCCAATCCCTGTTTAAAAATGTAG

Coding sequence (CDS)

ATGATAGAAGTAGGGATGAGGCCTAATGAAGTGACATTTCTTGGTGTGCTGTCTGCCTGTTCCCATACCGGTTTGTCATCTGAAGGATTATATATTCTGGAGTTAATGGAAAAGTGTTATGGTATTGAGCCTAGTTTAGATCATTATGCAGTCTTGATCGATATGTTTGGAAGAAAAAATAGACTTGCTGAAGCATTGGATTTAATAGCTAGAGCACCCAATGGATCAAAACACGTTGGAATATGGGGTGCAGTTCTGGGGGCTTGTCGAATGCCTGAAAATTTGAACCTGGCTATAAGAGCTGCAGAAACTTTGTTTAAGATGGAGCCAGATAATGACGGAATCCAGAAAAATTTGAGGGTGCAAGGCCTGATCGAGTTTTGTCTTAAGAGTTTGTATGCAGAGATGAAATTCAGAAAAAATTTCTCCCTGAAAGGGAAACATCTTTCCTTTGTCGTGGTTGCTCTTGCATTCACTGTCTTGGTGTTGTGGACCTGGGAAGAAAATCCTTTTCTTACCACTTGTCAATCAGTTCAAGCGTGGTACAGAACTTCTTATGCAGGTATGCTTGCCAATCCCTGTTTAAAAATGTAG

Protein sequence

MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKNRLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDGIQKNLRVQGLIEFCLKSLYAEMKFRKNFSLKGKHLSFVVVALAFTVLVLWTWEENPFLTTCQSVQAWYRTSYAGMLANPCLKM

Homology

[Close]

BLAST of Sgr018559 vs. NCBI nr
Match: XP_022925937.1 (pentatricopeptide repeat-containing protein At2g21090-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 275.0 bits (702), Expect = 5.0e-70
Identity = 140/215 (65.12%), Postives = 164/215 (76.28%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           MIEVG++PNEVTFLGVLSACSHTGLSSEGLYI+ELMEK   I+PSLDHYAVLIDMFGRKN
Sbjct: 372 MIEVGIKPNEVTFLGVLSACSHTGLSSEGLYIMELMEKSNDIKPSLDHYAVLIDMFGRKN 431

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG------ 120
           RLAEALDLI+RAPN SKH+GIWGAVLGACR+ +NL+LAIRAAETLF+MEPDN G      
Sbjct: 432 RLAEALDLISRAPNASKHIGIWGAVLGACRIHDNLDLAIRAAETLFEMEPDNAGRYVMLS 491

Query: 121 --------------IQKNLRVQGLIEFCLKSL-----YAEMKFRKNFSLKGKHLSFVVVA 180
                         ++K +  +G  +   +S      +AEMK R NF  +GKH SFV+ A
Sbjct: 492 NVFAAASRWMDAHNVRKLMEERGFKKEVAQSFIEIRNFAEMKLRNNFPARGKHCSFVMAA 551

Query: 181 LAFTVLVLWTWEENPFLTTCQSVQAWYRTSYAGML 191
           LAFT++VLW W EN F+TT QSVQAWYRTSY+G +
Sbjct: 552 LAFTIVVLWAWGENSFITTSQSVQAWYRTSYSGFM 586

[Close]

BLAST of Sgr018559 vs. NCBI nr
Match: XP_022925935.1 (pentatricopeptide repeat-containing protein At2g21090-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 275.0 bits (702), Expect = 5.0e-70
Identity = 140/215 (65.12%), Postives = 164/215 (76.28%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           MIEVG++PNEVTFLGVLSACSHTGLSSEGLYI+ELMEK   I+PSLDHYAVLIDMFGRKN
Sbjct: 372 MIEVGIKPNEVTFLGVLSACSHTGLSSEGLYIMELMEKSNDIKPSLDHYAVLIDMFGRKN 431

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG------ 120
           RLAEALDLI+RAPN SKH+GIWGAVLGACR+ +NL+LAIRAAETLF+MEPDN G      
Sbjct: 432 RLAEALDLISRAPNASKHIGIWGAVLGACRIHDNLDLAIRAAETLFEMEPDNAGRYVMLS 491

Query: 121 --------------IQKNLRVQGLIEFCLKSL-----YAEMKFRKNFSLKGKHLSFVVVA 180
                         ++K +  +G  +   +S      +AEMK R NF  +GKH SFV+ A
Sbjct: 492 NVFAAASRWMDAHNVRKLMEERGFKKEVAQSFIEIRNFAEMKLRNNFPARGKHCSFVMAA 551

Query: 181 LAFTVLVLWTWEENPFLTTCQSVQAWYRTSYAGML 191
           LAFT++VLW W EN F+TT QSVQAWYRTSY+G +
Sbjct: 552 LAFTIVVLWAWGENSFITTSQSVQAWYRTSYSGFM 586

[Close]

BLAST of Sgr018559 vs. NCBI nr
Match: XP_022925936.1 (pentatricopeptide repeat-containing protein At2g21090-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 6.5e-70
Identity = 140/213 (65.73%), Postives = 163/213 (76.53%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           MIEVG++PNEVTFLGVLSACSHTGLSSEGLYI+ELMEK   I+PSLDHYAVLIDMFGRKN
Sbjct: 372 MIEVGIKPNEVTFLGVLSACSHTGLSSEGLYIMELMEKSNDIKPSLDHYAVLIDMFGRKN 431

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG------ 120
           RLAEALDLI+RAPN SKH+GIWGAVLGACR+ +NL+LAIRAAETLF+MEPDN G      
Sbjct: 432 RLAEALDLISRAPNASKHIGIWGAVLGACRIHDNLDLAIRAAETLFEMEPDNAGRYVMLS 491

Query: 121 --------------IQKNLRVQGLIEFCLKSL-----YAEMKFRKNFSLKGKHLSFVVVA 180
                         ++K +  +G  +   +S      +AEMK R NF  +GKH SFV+ A
Sbjct: 492 NVFAAASRWMDAHNVRKLMEERGFKKEVAQSFIEIRNFAEMKLRNNFPARGKHCSFVMAA 551

Query: 181 LAFTVLVLWTWEENPFLTTCQSVQAWYRTSYAG 189
           LAFT++VLW W EN F+TT QSVQAWYRTSY+G
Sbjct: 552 LAFTIVVLWAWGENSFITTSQSVQAWYRTSYSG 584

[Close]

BLAST of Sgr018559 vs. NCBI nr
Match: XP_023543897.1 (pentatricopeptide repeat-containing protein At2g21090-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543898.1 pentatricopeptide repeat-containing protein At2g21090-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.6 bits (693), Expect = 5.5e-69
Identity = 140/215 (65.12%), Postives = 163/215 (75.81%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           MIEVG++PNEVTFLGVLSACSHTGLSSEGLYI+ELMEK   I+ SLDHYAVLIDMFGRKN
Sbjct: 372 MIEVGIKPNEVTFLGVLSACSHTGLSSEGLYIMELMEKSNDIKLSLDHYAVLIDMFGRKN 431

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG------ 120
           RLAEALDLI+RAPN SKHVGIWGAVLGACR+ +NL+LAIRAAETLF+MEPDN G      
Sbjct: 432 RLAEALDLISRAPNASKHVGIWGAVLGACRIHDNLDLAIRAAETLFEMEPDNAGRYVMLS 491

Query: 121 --------------IQKNLRVQGLIEFCLKSL-----YAEMKFRKNFSLKGKHLSFVVVA 180
                         ++K +  +G  +   +S      +AEMK R NF  +GKH SFV+ A
Sbjct: 492 NVFAAASRWMDAHNVRKLMEERGFKKEVAQSFIEIRNFAEMKLRNNFPARGKHCSFVMAA 551

Query: 181 LAFTVLVLWTWEENPFLTTCQSVQAWYRTSYAGML 191
           LAFT++VLW W EN F+TT QSVQAWYRTSY+G +
Sbjct: 552 LAFTIVVLWAWGENSFITTSQSVQAWYRTSYSGFM 586

[Close]

BLAST of Sgr018559 vs. NCBI nr
Match: XP_023543899.1 (pentatricopeptide repeat-containing protein At2g21090-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.2 bits (692), Expect = 7.2e-69
Identity = 140/213 (65.73%), Postives = 162/213 (76.06%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           MIEVG++PNEVTFLGVLSACSHTGLSSEGLYI+ELMEK   I+ SLDHYAVLIDMFGRKN
Sbjct: 372 MIEVGIKPNEVTFLGVLSACSHTGLSSEGLYIMELMEKSNDIKLSLDHYAVLIDMFGRKN 431

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG------ 120
           RLAEALDLI+RAPN SKHVGIWGAVLGACR+ +NL+LAIRAAETLF+MEPDN G      
Sbjct: 432 RLAEALDLISRAPNASKHVGIWGAVLGACRIHDNLDLAIRAAETLFEMEPDNAGRYVMLS 491

Query: 121 --------------IQKNLRVQGLIEFCLKSL-----YAEMKFRKNFSLKGKHLSFVVVA 180
                         ++K +  +G  +   +S      +AEMK R NF  +GKH SFV+ A
Sbjct: 492 NVFAAASRWMDAHNVRKLMEERGFKKEVAQSFIEIRNFAEMKLRNNFPARGKHCSFVMAA 551

Query: 181 LAFTVLVLWTWEENPFLTTCQSVQAWYRTSYAG 189
           LAFT++VLW W EN F+TT QSVQAWYRTSY+G
Sbjct: 552 LAFTIVVLWAWGENSFITTSQSVQAWYRTSYSG 584

[Close]

BLAST of Sgr018559 vs. ExPASy Swiss-Prot
Match: P0C8Q2 (Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E1 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.3e-24
Identity = 50/110 (45.45%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           MI++  +PN +TFL VL AC+H+G   +G     +M++ Y I P LDHY+ ++D+ GRK 
Sbjct: 450 MIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKG 509

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEP 111
           +L EAL+LI R  +     GIWGA+L AC++  N+ +A +AAE+LF +EP
Sbjct: 510 KLEEALELI-RNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEP 558

[Close]

BLAST of Sgr018559 vs. ExPASy Swiss-Prot
Match: Q9FFG8 (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H17 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.6e-24
Identity = 50/106 (47.17%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 6   MRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKNRLAEA 65
           ++PN VTF+G L ACSH+GL  +G  + + M + +G++P+ DHY  ++D+ GR  RL EA
Sbjct: 381 IKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEA 440

Query: 66  LDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPD 112
           L+LI +  +   H G+WGA+LGACR+  N  +A  AAE LF++EPD
Sbjct: 441 LELI-KTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPD 485

[Close]

BLAST of Sgr018559 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.6e-23
Identity = 52/109 (47.71%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 6   MRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKNRLAEA 65
           ++PN VTFL V+SACSH+GL   GL    +M++ Y IE S+DHY  ++D+ GR  RL EA
Sbjct: 535 IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594

Query: 66  LDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG 115
            D I + P     V ++GA+LGAC++ +N+N A +AAE LF++ PD+ G
Sbjct: 595 WDFIMQMP-VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGG 642

[Close]

BLAST of Sgr018559 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 4.7e-23
Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           M+  G++PNEVTF+ V +ACSH+G+  EGL I  +M+  YG+EPS DHYA ++D+ GR  
Sbjct: 609 MMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAG 668

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPD 112
           R+ EA  L+   P      G W ++LGA R+  NL +   AA+ L ++EP+
Sbjct: 669 RIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719

[Close]

BLAST of Sgr018559 vs. ExPASy Swiss-Prot
Match: Q9LZ19 (Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 6.2e-23
Identity = 53/114 (46.49%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           M + GM PNEVTF  +LS C HTGL  EG    +LM   YG+ P++ HY+ ++D+ GR  
Sbjct: 355 MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 414

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG 115
            L+EA +LI   P       IWG++L +CR+ +NL LA  AAE LF++EP+N G
Sbjct: 415 LLSEAYELIKSIP-FDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAG 467

[Close]

BLAST of Sgr018559 vs. ExPASy TrEMBL
Match: A0A6J1EJM2 (pentatricopeptide repeat-containing protein At2g21090-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433199 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.4e-70
Identity = 140/215 (65.12%), Postives = 164/215 (76.28%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           MIEVG++PNEVTFLGVLSACSHTGLSSEGLYI+ELMEK   I+PSLDHYAVLIDMFGRKN
Sbjct: 372 MIEVGIKPNEVTFLGVLSACSHTGLSSEGLYIMELMEKSNDIKPSLDHYAVLIDMFGRKN 431

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG------ 120
           RLAEALDLI+RAPN SKH+GIWGAVLGACR+ +NL+LAIRAAETLF+MEPDN G      
Sbjct: 432 RLAEALDLISRAPNASKHIGIWGAVLGACRIHDNLDLAIRAAETLFEMEPDNAGRYVMLS 491

Query: 121 --------------IQKNLRVQGLIEFCLKSL-----YAEMKFRKNFSLKGKHLSFVVVA 180
                         ++K +  +G  +   +S      +AEMK R NF  +GKH SFV+ A
Sbjct: 492 NVFAAASRWMDAHNVRKLMEERGFKKEVAQSFIEIRNFAEMKLRNNFPARGKHCSFVMAA 551

Query: 181 LAFTVLVLWTWEENPFLTTCQSVQAWYRTSYAGML 191
           LAFT++VLW W EN F+TT QSVQAWYRTSY+G +
Sbjct: 552 LAFTIVVLWAWGENSFITTSQSVQAWYRTSYSGFM 586

[Close]

BLAST of Sgr018559 vs. ExPASy TrEMBL
Match: A0A6J1ECZ4 (pentatricopeptide repeat-containing protein At2g21090-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111433199 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.4e-70
Identity = 140/215 (65.12%), Postives = 164/215 (76.28%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           MIEVG++PNEVTFLGVLSACSHTGLSSEGLYI+ELMEK   I+PSLDHYAVLIDMFGRKN
Sbjct: 372 MIEVGIKPNEVTFLGVLSACSHTGLSSEGLYIMELMEKSNDIKPSLDHYAVLIDMFGRKN 431

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG------ 120
           RLAEALDLI+RAPN SKH+GIWGAVLGACR+ +NL+LAIRAAETLF+MEPDN G      
Sbjct: 432 RLAEALDLISRAPNASKHIGIWGAVLGACRIHDNLDLAIRAAETLFEMEPDNAGRYVMLS 491

Query: 121 --------------IQKNLRVQGLIEFCLKSL-----YAEMKFRKNFSLKGKHLSFVVVA 180
                         ++K +  +G  +   +S      +AEMK R NF  +GKH SFV+ A
Sbjct: 492 NVFAAASRWMDAHNVRKLMEERGFKKEVAQSFIEIRNFAEMKLRNNFPARGKHCSFVMAA 551

Query: 181 LAFTVLVLWTWEENPFLTTCQSVQAWYRTSYAGML 191
           LAFT++VLW W EN F+TT QSVQAWYRTSY+G +
Sbjct: 552 LAFTIVVLWAWGENSFITTSQSVQAWYRTSYSGFM 586

[Close]

BLAST of Sgr018559 vs. ExPASy TrEMBL
Match: A0A6J1EDI3 (pentatricopeptide repeat-containing protein At2g21090-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433199 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.1e-70
Identity = 140/213 (65.73%), Postives = 163/213 (76.53%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           MIEVG++PNEVTFLGVLSACSHTGLSSEGLYI+ELMEK   I+PSLDHYAVLIDMFGRKN
Sbjct: 372 MIEVGIKPNEVTFLGVLSACSHTGLSSEGLYIMELMEKSNDIKPSLDHYAVLIDMFGRKN 431

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG------ 120
           RLAEALDLI+RAPN SKH+GIWGAVLGACR+ +NL+LAIRAAETLF+MEPDN G      
Sbjct: 432 RLAEALDLISRAPNASKHIGIWGAVLGACRIHDNLDLAIRAAETLFEMEPDNAGRYVMLS 491

Query: 121 --------------IQKNLRVQGLIEFCLKSL-----YAEMKFRKNFSLKGKHLSFVVVA 180
                         ++K +  +G  +   +S      +AEMK R NF  +GKH SFV+ A
Sbjct: 492 NVFAAASRWMDAHNVRKLMEERGFKKEVAQSFIEIRNFAEMKLRNNFPARGKHCSFVMAA 551

Query: 181 LAFTVLVLWTWEENPFLTTCQSVQAWYRTSYAG 189
           LAFT++VLW W EN F+TT QSVQAWYRTSY+G
Sbjct: 552 LAFTIVVLWAWGENSFITTSQSVQAWYRTSYSG 584

[Close]

BLAST of Sgr018559 vs. ExPASy TrEMBL
Match: A0A5D3C8H5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001990 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 6.8e-49
Identity = 97/114 (85.09%), Postives = 109/114 (95.61%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           M EVG+RPN+VTFLGVLSACSHTGLSSEGLYILELMEK Y I+PSL+HYAV+IDMFGR+N
Sbjct: 342 MTEVGIRPNKVTFLGVLSACSHTGLSSEGLYILELMEKSYDIKPSLEHYAVMIDMFGREN 401

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG 115
           +L+EALDLI+RAPNGSKHVGIWGAVLGACR+ ENL+LAIRAAETLF+MEPDN G
Sbjct: 402 KLSEALDLISRAPNGSKHVGIWGAVLGACRIHENLDLAIRAAETLFEMEPDNAG 455

[Close]

BLAST of Sgr018559 vs. ExPASy TrEMBL
Match: A0A6J1BT15 (pentatricopeptide repeat-containing protein At2g13600-like OS=Momordica charantia OX=3673 GN=LOC111005503 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 6.8e-49
Identity = 99/114 (86.84%), Postives = 107/114 (93.86%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           MIEVG+RPN+VTFLGVLSACSHTGL SEGLY+LELMEK +GI+PSLDHYAVLIDMFGRKN
Sbjct: 372 MIEVGIRPNKVTFLGVLSACSHTGLLSEGLYLLELMEKFFGIKPSLDHYAVLIDMFGRKN 431

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG 115
           RLAEALDLIARAPN S HVGIWGAVLGACRM ENL+LA+ AAETLF+MEPDN G
Sbjct: 432 RLAEALDLIARAPNRSNHVGIWGAVLGACRMHENLDLAMSAAETLFEMEPDNAG 485

[Close]

BLAST of Sgr018559 vs. TAIR 10
Match: AT4G19191.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 5.2e-25
Identity = 50/110 (45.45%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           MI++  +PN +TFL VL AC+H+G   +G     +M++ Y I P LDHY+ ++D+ GRK 
Sbjct: 450 MIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKG 509

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEP 111
           +L EAL+LI R  +     GIWGA+L AC++  N+ +A +AAE+LF +EP
Sbjct: 510 KLEEALELI-RNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEP 558

[Close]

BLAST of Sgr018559 vs. TAIR 10
Match: AT5G44230.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 6.8e-25
Identity = 50/106 (47.17%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 6   MRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKNRLAEA 65
           ++PN VTF+G L ACSH+GL  +G  + + M + +G++P+ DHY  ++D+ GR  RL EA
Sbjct: 381 IKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEA 440

Query: 66  LDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPD 112
           L+LI +  +   H G+WGA+LGACR+  N  +A  AAE LF++EPD
Sbjct: 441 LELI-KTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPD 485

[Close]

BLAST of Sgr018559 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-24
Identity = 52/109 (47.71%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 6   MRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKNRLAEA 65
           ++PN VTFL V+SACSH+GL   GL    +M++ Y IE S+DHY  ++D+ GR  RL EA
Sbjct: 535 IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594

Query: 66  LDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG 115
            D I + P     V ++GA+LGAC++ +N+N A +AAE LF++ PD+ G
Sbjct: 595 WDFIMQMP-VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGG 642

[Close]

BLAST of Sgr018559 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 3.4e-24
Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           M+  G++PNEVTF+ V +ACSH+G+  EGL I  +M+  YG+EPS DHYA ++D+ GR  
Sbjct: 609 MMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAG 668

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPD 112
           R+ EA  L+   P      G W ++LGA R+  NL +   AA+ L ++EP+
Sbjct: 669 RIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719

[Close]

BLAST of Sgr018559 vs. TAIR 10
Match: AT5G04780.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 4.4e-24
Identity = 53/114 (46.49%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 1   MIEVGMRPNEVTFLGVLSACSHTGLSSEGLYILELMEKCYGIEPSLDHYAVLIDMFGRKN 60
           M + GM PNEVTF  +LS C HTGL  EG    +LM   YG+ P++ HY+ ++D+ GR  
Sbjct: 355 MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 414

Query: 61  RLAEALDLIARAPNGSKHVGIWGAVLGACRMPENLNLAIRAAETLFKMEPDNDG 115
            L+EA +LI   P       IWG++L +CR+ +NL LA  AAE LF++EP+N G
Sbjct: 415 LLSEAYELIKSIP-FDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAG 467

The following BLAST results are available for this feature:

BLAST of Sgr018559 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925937.1	5.0e-70	65.12	pentatricopeptide repeat-containing protein At2g21090-like isoform X3 [Cucurbita...	[more]
XP_022925935.1	5.0e-70	65.12	pentatricopeptide repeat-containing protein At2g21090-like isoform X1 [Cucurbita...	[more]
XP_022925936.1	6.5e-70	65.73	pentatricopeptide repeat-containing protein At2g21090-like isoform X2 [Cucurbita...	[more]
XP_023543897.1	5.5e-69	65.12	pentatricopeptide repeat-containing protein At2g21090-like isoform X1 [Cucurbita...	[more]
XP_023543899.1	7.2e-69	65.73	pentatricopeptide repeat-containing protein At2g21090-like isoform X2 [Cucurbita...	[more]

BLAST of Sgr018559 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8Q2	7.3e-24	45.45	Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidop...	[more]
Q9FFG8	9.6e-24	47.17	Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX...	[more]
Q3E6Q1	3.6e-23	47.71	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
Q7Y211	4.7e-23	44.14	Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop...	[more]
Q9LZ19	6.2e-23	46.49	Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidop...	[more]

BLAST of Sgr018559 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJM2	2.4e-70	65.12	pentatricopeptide repeat-containing protein At2g21090-like isoform X1 OS=Cucurbi...	[more]
A0A6J1ECZ4	2.4e-70	65.12	pentatricopeptide repeat-containing protein At2g21090-like isoform X3 OS=Cucurbi...	[more]
A0A6J1EDI3	3.1e-70	65.73	pentatricopeptide repeat-containing protein At2g21090-like isoform X2 OS=Cucurbi...	[more]
A0A5D3C8H5	6.8e-49	85.09	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1BT15	6.8e-49	86.84	pentatricopeptide repeat-containing protein At2g13600-like OS=Momordica charanti...	[more]

BLAST of Sgr018559 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19191.1	5.2e-25	45.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G44230.1	6.8e-25	47.17	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G11290.1	2.6e-24	47.71	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G57430.1	3.4e-24	44.14	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G04780.1	4.4e-24	46.49	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 4..58 e-value: 7.2E-6 score: 26.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 11..45 e-value: 0.0022 score: 16.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..150 e-value: 9.0E-18 score: 66.7
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 1..113
None	No IPR available	PANTHER	PTHR47926:SF232	SUBFAMILY NOT NAMED	coord: 1..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr018559.1	Sgr018559.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding