Sgr018173 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr018173
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	protein GRAVITROPIC IN THE LIGHT 1
Location	tig00153113: 778603 .. 778899 (-)
RNA-Seq Expression	Sgr018173
Synteny	Sgr018173

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGACATGGATGGTTCCTCCAACTACAAGACCCCACAGATCTCCGAGATGTTTCAGAAATTCGCCCTCGCTTTCAAGACCAAAACGTTTGAATTCTTTGCCGATGAGGATGCTGCTGACGAATCTGATGGCTTTTCGCTCTTGGACTCCGCCGAGGAGGTTATTACGGACCAGAAAGTCGTCGTGATTAAGCCCGACTCGGCTTTCGATGTGTTTCCCTCCGTGCCGTCCGCGGCGGTGAGGCCTCTGGCGACAAGGGGAATCGGGTGGAGAGTGAAGCCCGACTCGGCTTAG

mRNA sequence

ATGCCGGACATGGATGGTTCCTCCAACTACAAGACCCCACAGATCTCCGAGATGTTTCAGAAATTCGCCCTCGCTTTCAAGACCAAAACGTTTGAATTCTTTGCCGATGAGGATGCTGCTGACGAATCTGATGGCTTTTCGCTCTTGGACTCCGCCGAGGAGGTTATTACGGACCAGAAAGTCGTCGTGATTAAGCCCGACTCGGCTTTCGATGTGTTTCCCTCCGTGCCGTCCGCGGCGGTGAGGCCTCTGGCGACAAGGGGAATCGGGTGGAGAGTGAAGCCCGACTCGGCTTAG

Coding sequence (CDS)

ATGCCGGACATGGATGGTTCCTCCAACTACAAGACCCCACAGATCTCCGAGATGTTTCAGAAATTCGCCCTCGCTTTCAAGACCAAAACGTTTGAATTCTTTGCCGATGAGGATGCTGCTGACGAATCTGATGGCTTTTCGCTCTTGGACTCCGCCGAGGAGGTTATTACGGACCAGAAAGTCGTCGTGATTAAGCCCGACTCGGCTTTCGATGTGTTTCCCTCCGTGCCGTCCGCGGCGGTGAGGCCTCTGGCGACAAGGGGAATCGGGTGGAGAGTGAAGCCCGACTCGGCTTAG

Protein sequence

MPDMDGSSNYKTPQISEMFQKFALAFKTKTFEFFADEDAADESDGFSLLDSAEEVITDQKVVVIKPDSAFDVFPSVPSAAVRPLATRGIGWRVKPDSA

Homology

[Close]

BLAST of Sgr018173 vs. NCBI nr
Match: KAG7025964.1 (IRK-interacting protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-34
Identity = 77/85 (90.59%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MPDMDGSSNYKTPQISEMFQKFALAFKTKTFEFFADEDAADESDGFSLLDSAEEVITDQK 60
          MPDMDGSSNYK+PQISEMFQKFALAFKTKTFEFFAD+DAADE DGFSLLDSAEEVITDQK
Sbjct: 1  MPDMDGSSNYKSPQISEMFQKFALAFKTKTFEFFADDDAADEPDGFSLLDSAEEVITDQK 60

Query: 61 VVVIKPDSAFDVFPSVPSAAVRPLA 86
          VVVIKPDSAFD+FPS+PSA ++PLA
Sbjct: 61 VVVIKPDSAFDLFPSLPSAVIKPLA 85

[Close]

BLAST of Sgr018173 vs. NCBI nr
Match: XP_023514503.1 (protein GRAVITROPIC IN THE LIGHT 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-34
Identity = 77/85 (90.59%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MPDMDGSSNYKTPQISEMFQKFALAFKTKTFEFFADEDAADESDGFSLLDSAEEVITDQK 60
          MPDMDGSSNYK+PQISEMFQKFALAFKTKTFEFFAD+DAADE DGFSLLDSAEEVITDQK
Sbjct: 1  MPDMDGSSNYKSPQISEMFQKFALAFKTKTFEFFADDDAADEPDGFSLLDSAEEVITDQK 60

Query: 61 VVVIKPDSAFDVFPSVPSAAVRPLA 86
          VVVIKPDSAFD+FPS+PSA ++PLA
Sbjct: 61 VVVIKPDSAFDLFPSLPSAVIKPLA 85

[Close]

BLAST of Sgr018173 vs. NCBI nr
Match: XP_022964602.1 (protein GRAVITROPIC IN THE LIGHT 1 [Cucurbita moschata])

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-34
Identity = 77/85 (90.59%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MPDMDGSSNYKTPQISEMFQKFALAFKTKTFEFFADEDAADESDGFSLLDSAEEVITDQK 60
          MPDMDGSSNYK+PQISEMFQKFALAFKTKTFEFFAD+DAADE DGFSLLDSAEEVITDQK
Sbjct: 1  MPDMDGSSNYKSPQISEMFQKFALAFKTKTFEFFADDDAADEPDGFSLLDSAEEVITDQK 60

Query: 61 VVVIKPDSAFDVFPSVPSAAVRPLA 86
          VVVIKPDSAFD+FPS+PSA ++PLA
Sbjct: 61 VVVIKPDSAFDLFPSLPSAVIKPLA 85

[Close]

BLAST of Sgr018173 vs. NCBI nr
Match: XP_023514504.1 (uncharacterized protein LOC111778761 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-34
Identity = 77/85 (90.59%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MPDMDGSSNYKTPQISEMFQKFALAFKTKTFEFFADEDAADESDGFSLLDSAEEVITDQK 60
          MPDMDGSSNYK+PQISEMFQKFALAFKTKTFEFFAD+DAADE DGFSLLDSAEEVITDQK
Sbjct: 1  MPDMDGSSNYKSPQISEMFQKFALAFKTKTFEFFADDDAADEPDGFSLLDSAEEVITDQK 60

Query: 61 VVVIKPDSAFDVFPSVPSAAVRPLA 86
          VVVIKPDSAFD+FPS+PSA ++PLA
Sbjct: 61 VVVIKPDSAFDLFPSLPSAVIKPLA 85

[Close]

BLAST of Sgr018173 vs. NCBI nr
Match: XP_023000092.1 (protein GRAVITROPIC IN THE LIGHT 1 isoform X1 [Cucurbita maxima] >XP_023000093.1 protein GRAVITROPIC IN THE LIGHT 1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-34
Identity = 77/85 (90.59%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MPDMDGSSNYKTPQISEMFQKFALAFKTKTFEFFADEDAADESDGFSLLDSAEEVITDQK 60
          MPDMDGSSNYK+PQISEMFQKFALAFKTKTFEFFAD+DAADE DGFSLLDSAEEVITDQK
Sbjct: 1  MPDMDGSSNYKSPQISEMFQKFALAFKTKTFEFFADDDAADEPDGFSLLDSAEEVITDQK 60

Query: 61 VVVIKPDSAFDVFPSVPSAAVRPLA 86
          VVVIKPDSAFD+FPS+PSA ++PLA
Sbjct: 61 VVVIKPDSAFDLFPSLPSAVIKPLA 85

[Close]

BLAST of Sgr018173 vs. ExPASy TrEMBL
Match: A0A6J1KCL3 (protein GRAVITROPIC IN THE LIGHT 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494391 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 8.1e-35
Identity = 77/85 (90.59%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MPDMDGSSNYKTPQISEMFQKFALAFKTKTFEFFADEDAADESDGFSLLDSAEEVITDQK 60
          MPDMDGSSNYK+PQISEMFQKFALAFKTKTFEFFAD+DAADE DGFSLLDSAEEVITDQK
Sbjct: 1  MPDMDGSSNYKSPQISEMFQKFALAFKTKTFEFFADDDAADEPDGFSLLDSAEEVITDQK 60

Query: 61 VVVIKPDSAFDVFPSVPSAAVRPLA 86
          VVVIKPDSAFD+FPS+PSA ++PLA
Sbjct: 61 VVVIKPDSAFDLFPSLPSAVIKPLA 85

[Close]

BLAST of Sgr018173 vs. ExPASy TrEMBL
Match: A0A6J1HI83 (protein GRAVITROPIC IN THE LIGHT 1 OS=Cucurbita moschata OX=3662 GN=LOC111464566 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 8.1e-35
Identity = 77/85 (90.59%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MPDMDGSSNYKTPQISEMFQKFALAFKTKTFEFFADEDAADESDGFSLLDSAEEVITDQK 60
          MPDMDGSSNYK+PQISEMFQKFALAFKTKTFEFFAD+DAADE DGFSLLDSAEEVITDQK
Sbjct: 1  MPDMDGSSNYKSPQISEMFQKFALAFKTKTFEFFADDDAADEPDGFSLLDSAEEVITDQK 60

Query: 61 VVVIKPDSAFDVFPSVPSAAVRPLA 86
          VVVIKPDSAFD+FPS+PSA ++PLA
Sbjct: 61 VVVIKPDSAFDLFPSLPSAVIKPLA 85

[Close]

BLAST of Sgr018173 vs. ExPASy TrEMBL
Match: A0A5D3CUU8 (IRK-interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00060 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.9e-31
Identity = 72/94 (76.60%), Postives = 83/94 (88.30%), Query Frame = 0


Query: 1  MPDMDGSSNYKTPQISEMFQKFALAFKTKTFEFFADEDAADESDGFSLLDSAEEVITDQK 60
          M DMDGSSNYKTPQIS+MFQKFALAFKTKTFEFFAD+DA D+SDGFSLLDSAEE+ITDQK
Sbjct: 1  MCDMDGSSNYKTPQISQMFQKFALAFKTKTFEFFADDDAPDDSDGFSLLDSAEEIITDQK 60

Query: 61 VVVIKPDSAFDVFPSVPSAAVRPLATRGIGWRVK 95
          VVVIKPDSAFD FP+VPS  + P + + +  +V+
Sbjct: 61 VVVIKPDSAFDFFPTVPSNVIPPKSNQVVESKVE 94

[Close]

BLAST of Sgr018173 vs. ExPASy TrEMBL
Match: A0A1S3C6P3 (IRK-interacting protein OS=Cucumis melo OX=3656 GN=LOC103497664 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.9e-31
Identity = 72/94 (76.60%), Postives = 83/94 (88.30%), Query Frame = 0


Query: 1  MPDMDGSSNYKTPQISEMFQKFALAFKTKTFEFFADEDAADESDGFSLLDSAEEVITDQK 60
          M DMDGSSNYKTPQIS+MFQKFALAFKTKTFEFFAD+DA D+SDGFSLLDSAEE+ITDQK
Sbjct: 1  MCDMDGSSNYKTPQISQMFQKFALAFKTKTFEFFADDDAPDDSDGFSLLDSAEEIITDQK 60

Query: 61 VVVIKPDSAFDVFPSVPSAAVRPLATRGIGWRVK 95
          VVVIKPDSAFD FP+VPS  + P + + +  +V+
Sbjct: 61 VVVIKPDSAFDFFPTVPSNVIPPKSNQVVESKVE 94

[Close]

BLAST of Sgr018173 vs. ExPASy TrEMBL
Match: A0A0A0KFR3 (DUF641 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109710 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.2e-31
Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 1  MPDMDGSSNYKTPQISEMFQKFALAFKTKTFEFFADEDAADESDGFSLLDSAEEVITDQK 60
          M DMDGSSNYKTPQIS+MFQKFALAFKTKTFEFFAD+DA D+SDGFSLLDSAEE+ITDQK
Sbjct: 1  MCDMDGSSNYKTPQISQMFQKFALAFKTKTFEFFADDDAPDDSDGFSLLDSAEEIITDQK 60

Query: 61 VVVIKPDSAFDVFPSVPSAAVRPLATRGIGWRVK 95
          VVVIKPDSAFD FP+VPS  + P +   +  +V+
Sbjct: 61 VVVIKPDSAFDFFPTVPSNLIPPKSNHVVESKVE 94

[Close]

BLAST of Sgr018173 vs. TAIR 10
Match: AT3G60680.1 (Plant protein of unknown function (DUF641) )

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 36/56 (64.29%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 13 PQISEMFQKFALAFKTKTFEFFADED-AADESDGFSLLDSAEEVITDQKVVVIKPD 68
          PQ S+MFQK A+A KTKT+EFF ++D    +++GFSLLDS+E+ ITDQKVVV+KPD
Sbjct: 14 PQFSQMFQKLAMAVKTKTYEFFTEDDNERTDAEGFSLLDSSEDFITDQKVVVLKPD 69

The following BLAST results are available for this feature:

BLAST of Sgr018173 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025964.1	1.7e-34	90.59	IRK-interacting protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023514503.1	1.7e-34	90.59	protein GRAVITROPIC IN THE LIGHT 1 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022964602.1	1.7e-34	90.59	protein GRAVITROPIC IN THE LIGHT 1 [Cucurbita moschata]	[more]
XP_023514504.1	1.7e-34	90.59	uncharacterized protein LOC111778761 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023000092.1	1.7e-34	90.59	protein GRAVITROPIC IN THE LIGHT 1 isoform X1 [Cucurbita maxima] >XP_023000093.1...	[more]

BLAST of Sgr018173 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr018173 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KCL3	8.1e-35	90.59	protein GRAVITROPIC IN THE LIGHT 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HI83	8.1e-35	90.59	protein GRAVITROPIC IN THE LIGHT 1 OS=Cucurbita moschata OX=3662 GN=LOC111464566...	[more]
A0A5D3CUU8	1.9e-31	76.60	IRK-interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C6P3	1.9e-31	76.60	IRK-interacting protein OS=Cucumis melo OX=3656 GN=LOC103497664 PE=4 SV=1	[more]
A0A0A0KFR3	3.2e-31	76.60	DUF641 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109710 PE=4...	[more]

BLAST of Sgr018173 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60680.1	1.3e-13	64.29	Plant protein of unknown function (DUF641)	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31161:SF3	EXPRESSED PROTEIN	coord: 12..70
IPR040225	Protein gravitropic in the light 1-like	PANTHER	PTHR31161	PROTEIN GRAVITROPIC IN THE LIGHT 1	coord: 12..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr018173.1	Sgr018173.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009959	negative gravitropism
biological_process	GO:0009639	response to red or far red light