Sgr017304 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr017304
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	exosome complex component RRP43
Location	tig00153037: 824547 .. 833830 (+)
RNA-Seq Expression	Sgr017304
Synteny	Sgr017304

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGAATGTTTTCCAAATCTGGGGTCGACGTGAATGGCGGAAGGGAAAGAGAGAGGGTAAGAGGTACCGGGTGGTGAGGAACGGGGCGCTGCGGCGGAGGTGGTGAGGAAGGGGGCGAGAGGGAGGGAATATGTTTTTTAATATTTTTTAAAATTTTAAAATTTTGACACGGCATCATAGATAAATATGAAAAAAAAAAACCACATCATTTCCTGTTAAAAAAGTTAACGGAAAATTAACAATGTAAACCAAAAAAGAGCATTAATAAAACCTTAGGAGTAAGAGTATATGAGAAAGTTTTCCTCATTTTTTTTTTTCGCCTCTGTTGATCATCCAATGCAAACTGACGGAAAAGTTAACCCATCTAACAGTACGGGTCAATTTCAACCATTAACAAAGGTGGGGGCTGCCGAATTGGCATATTTCTTGCGTGTACCAATTGAAGTTTTTTGAAAAATGAAATTTAGAATCAATGCAAATTGGGTTTTTTTTTAGGCCTGATTATATGAAAATGATCTCTAATCTTTTAGATTACTTTTAATTTGATCTTTAATCTTTTAAAATTTTTAAATTTACTTCTAATATATAAATTTTTTTTATTTAGGTCATTCTATAAAAAAATTGTTAAAATTTGTTAAATATATCATCAAATTATTATTTTATTAACATATTTGAATACGTAATATGTGATTTGGATGTTACTTGACACATAAAACGTACATCGCTCATCAATAAAATTCGACCCGCTCATCAACAAAATCTATTTCTTCAAAATGATATGTTCAAGTGACATGTCTGTGTGTTCTCAAATATGTTAACAAAATAATAATTTAATGACACATCAACTTTCTATTGATAAATTTTAACATATTTTTTTTATGAAAAGACTTAATTGAAAATTTTTAATACATTGAAGATAAAATTAAAAATTTTAAAATATTAAAGATCAAATTAAAAAAAAAAAAATAGTGACATTTAGCCTAATTCTTACTGTTAAAAATTTATGGGTGCAGTTGTACGTAGTTTAGGCGGTTTGCGGTTTCCGCAATTTGCCAAAAAATAATAATAAATAAAATAAACCATTCGGTTTTTTTAGGTGATTTGGATCAATCTTTTAGGCACGGTCGAACCGGTTTCTGCGACGGTTTTCCAATGAGCCCAAATCGCTCGGATTTTCTTCGGTACTTCCTTCCATTAGACACGTTCCAGCTGCACCACAACGGGGGGCAATTGACACCTCGCGCTCGCTGCCTCCATTTTCATGCCGTCTCCACCTCCACGGCCGCCGCATTCATCTCCTTTGAAATCGCCGCAAGTCGCCGCCGAAGCCCACCGCAACTGAAGCCCCGCTGCTGGGTTTTGGATCGGAGAAAAGATAGACAAAGAAGTGCAGAACATATACACATAGGAGCGTCTGGTTTATTGTTAGAGAAAGAGAAGGAAATAACTAGTGCTTTGAGTTCAGAACCTTGCTGATAAAGCTTCATCTTTAATTTCTTTCATGACATTAGTCTAGGGTAATTGCTGGAAACAGATAAGAAGAATACCCAAAGAATGGGATTGCCAAATGCTGCTTCTGGGGACTTGTCGTCAGAAATGGAGGTTGATGCTTTCAGACGACTCTTCCCACTTCAGTTTTATGAGCGTCATCTCGCTGAATCAATACGTCCTGATGGAAGAGCTCTTGGAAAAGCTAGAGACACGACCATAGCTCTTGGTTAGTTGTTGGCTTTCATTTACAGAAACTTTCTATTTCTTTACGATTTTCAACTTTTGTTTATCATCTCGAGTTTGCTTGATTGATTTTCATACTCAAAACTGAATTTGGATATCGTTTGTTCATATAAGGGCCGGTATCAACTGCGAACGGGTCAGCTCTGGCAAAGATTGGTTCTACGGTAAGTGCCTCCACGCCGGTCTTTATCCTAGAGCAGGCTATACCTGTATGAGAGTGCTTAGATTTTGTGATAGTTTATTCCGTATCTTTTTCAAAATCCGATAATTTGATATAGTGCAGACAATGTTGGCTGCTATTAAAATGGAAGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGCTGCATAGGTTGGCCATTGTCAATTGCTAGATATTTTTGGTCCTTGTTCATCATTATCTTTATGATAACATCCTAAACATCTTGGTGATATTGGGTATATATTTTTTTTCCAGCTATTGATTTCCATATGCCTCCAATATGCTCTCCGATTGTTAGGCCTGGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACACTATTTCAAGGTACCGTTTCACCTTTTGTGCAACTTACTTAGACATTGTAATTCGCACACGATATTCTTTTGCCTTTAGAGAATCTTTTGACTACTATTGAAGTTTTTTGAGATGGGTTTGGGATTAAAGATTAACCTCCTTAGTGGTGGTATTAATTGCAATGAGAATAGAACTCTGGAGGTAGCTAACATATTATCATGTGGAGTGGGCTCACTTGGCCCCTAACTTGGGAATGCCTCTTATGGGAAATCTGACTTTTAAAGACTTTTGGGATCCGGTCATAGATAGATTAAGGGGAAAGACTTCAAAATGGAAGAATTAACTTCTCTCTGAGGGAGGAAGATTATCTCTTATTCAATTGGTACTCTCCTCTATTCTCTTATATCATATGTCTCTTTTCCAGATGCCTAGCACGATTGCTAATATTCTAGAATAGAACATTAGACTTTATTTAGGAAAGCAATAATGGGGGAGAGGCAACCATTTGGTGAATCGGAAGACAACTTGCCTCCCCTTCGCTAGTGGTGGCTTGGGGATTGGAAACTTGAGAGTTGAGAAGTGGAAATGTTGCCCTCATGATTAAGTGGCTTTGGAGATTTCCTAAAGAGAGGGAAGCTCTTCGGTATAAAATTGTGGTGAGCAAGGTTGACCTTCATGATGAGGGTTGGAACTCAAAAGAGATTAAAAAAGCAAACAAAAGAAGCCCATGGGTTAGCATTTCTAAACTGAAAAATATCTTCTTCTCTCATGCTGTTTAGAAAGTTAACAATTGCAAAAATATGCTTTTTTGGGAAGAAAAATGGCATAATAGGGACCCCTTTGCTTGACCTTTTCTTGCCTTTATGCCTTAGCTAACAGAAAAGCCAAGACTCTTTTGCAAGGCTAGAATGGTGAGCAAAACTATTGGTTACTTAACTTTAGGTAGAATTTCAGAGACATTGAAACAGAAGAATGGATCTCCCTTATGGATGTTTTGAATTCTGTGCTTCTTAGGGAGGAGGATATATTTTGCAATGGTCTCTTGAAGGGTCAAGCAACTTCACTGTCAAGCCCTTATTCAATAAATTAACTAGTGGCCAAGGCCTCCCAAAGGAAGACTACAACCAACTGATTTGGAAGAGAAAAAGCCCAAAGAAGGTTAAATTCTCTTGTGGACTTTTCTTCTTAACAAATTAAACACTATGAACTGGGTTCAAAAAGAAAACCCAAATTTGGTTTTATGACCCTCTTAGTGGGTCCTTCGCTACGGGAGTATTGAAGATCTCAACGATAACTTTCTTCACTATGAATTTACTCAAAGAGATCCAGCATTGGGCTGATTTGGTATTCTCCTGAAGAGGCTTCCTGGGCTTCCTGGGCTTTCCCCTTTTTGTATTGCCCTTGTGTATTCTTTCATTTCTTCTCAATGAAAGTTGGTTTCTTCTTTTAAAAAAGGCTTCTTCTACTTTTTCAATTTCAACTACTTTATAAAGCTTCTTTAAAGAGGGAAGACAAAATTCTTATGGGGAGAATGTTGTGAAAGCTACATTCTAGAAAATCTGGCTTGAAAGAAATGAGAGGCTTTTTGGAGGGAAAAGAGAAACATTTGAGTGATTTTTGGGACATTTTCAAGTTTAATGCTTCTTTATGGTGCTCTAGATCAAAACTCTTCGGTGGTTGTTCTCCTTTCTTGATTTCTACAGTTGGAGGACTTTTTTTTTTTTTATAAGAAATGGAGAAATATATTGATGAAAGGAGAGGATACAAAATAGAGGGGAGATGAGATATCCCCACAGGACCAAAGGGTTACAAAAAGGAGGCCCAATTGGTTAAAATATGTACAAGCTCATAATTACAAAAAAGTTTAGAAAGAGAACACTAGATGGAAGCAAAGAGTTTGGTGGAGTCCCAAAAATCCTCAAGACCGGAAGAAATCTGTTTGATGACCCTCTGGTTTCTTTCGAACCATAATCTCCATAAGGTAGCAATAACTGCGTTGAACACCATTTGGAGGGCTTTTTTGTAACCTACCTTGGTTTTTGTAAGTTGGGAGATGTCTCATCTTCCCTCTGTTATAGCCTCCTTCTTTGGTAATTAAAAGTTGTTTCTTAAAAAAAAAAAAACTTTGACCTATTGCAAACTATTCTGCTTGCAGTATTGCATTTTTTTAGTATTTTACAAGCAAACTGGTTTTCTCACCAAAGGGTATTCGATAAATATTTAATTTTGTCAATAGAATGTTGTTCTCTCGACAGCTCTTTTAATGCTCTTTAGATTTGATCCTAAAAAATTCAATTATTAGTTTGTCACCATTTAATGGAGATCTGATAAAAAAAATGCAATACACTTTGGTTTCCTATCTCTTATCCTTGTCCTAAAAGTCAATTTTCTTTGAATCTAATGGCTGACTAATTATGACACTGATGTGAATTTTTCAGTTCTGGGATGATTGATCTGAGAGAATTATCTCTTGTTAAAGGAAAAGCTGCTTGGATGGCGTACCTGGTATGTGTTTTGAATTTATGCATTGTCAACATATATATATTTCTATTCTAGAAGTATTTTGGTGTTTAATGTAAGACTTCACTACCGGCTTATCTTTATTTTTTGTCTCTAAAATTTTTACTTGCGTCATCATCCTTAATGTTATTGGACATTTTCTTTTTATAGCATGATTTTTGGCCAGATTGCAGCTTTAGTATTGCAGTTAATCATTTGGATGAGATAGCAACTTGACATGTGTTCCACAGGATATTTATTGTTTGGATGCTGATGGATCTCTTTTTGATGCCGCACTTCTTTCTGCAGCTGCTGCATTTTCTCACTGTAAGATTTCAGGCTCTCACTAGTTCATAACTTTATATGTTTCTGCATAATCTGGTAGATGTAATGCTGAAGGAAGTAATGCTGGTTATGGAACATTTGTCCAACATTAAGAATAGATTTTCAGATCATAGATTGATACTTTATGCTTTTAATCCGTTATACATTACTTATGTTACTGGATAACATTCTGAAATTGTATCCCTTTTTTTAAATTCCTTAAATTTTAGGGGGTACTTAGTAATTATGTCACCAACTTAACTACCACACCATATACATGCCAGGCCATCTAATCTAATGGTCAACAAAATTCATTGACCATTTAGAACCATTCCCATACCTCTAGGACTAAAGCGTTGCTATTCAAACTTCATGAACTAAATCTACTAAAAGTGTAACTTGCCCTAAAAAACACTGGTTACAATAGAATTTCTTGTGGAAGGCACTCCAGCAAGAGGTCGTAAATGGTACATGATCACAAAATAAATCAAAGGCAGGCTTTTTATCTCTAAAAGTTTTTTGGTTTCTTTCCATCCAAAAGAGCCATGATAACGCTCTAACCACACAAATCCAAAGGACTTCAGTCTTGTCTTTCAACCACCATCTTGAGAGGGCTTCGGGCAACTAATCATCAATTCAATTAGGCAAGCAAAGAGACGTTGACAAATATCGTGGATGGACCATTGAAACTGCTCCATCATTCCTCCAATGGATGTTACACGTATGAGAAATTCTTCCAAACGGAAGAAAACACTGTTAGAGGACGAATACAATTGCCTGGAACTCACTATGGAAGGACTAAGGAGAGCTTATCCTCTTGTCTCATCAAGTGATTTACTTGATCCAATTCTTGGACTATCAAGTTCGTCAATGTTGTGCTACTATTCTCTTTTCAAAGAAGCTTCAGGAGAAAGAATTTCATCTTATCTGCTTTTGGTTGGTCGGTGGTTTTTCCCAACAATATCCCTGCTTGGCTGTCTTTGATATTCTCAGATCACCCTTTCAAGAAGGCCAAGAAGATCTTATGGCTTCAGATCAACAAGGCTTTTATTTGGTTGCTGTGGAATGAGAGAAGTGCTAGAATTTTCCAAAACAAGGAGAAAGCAATGGATTCTTTTTTAGACCATCCTTACTTCCTTGCTTTATCTTGGTGTGAAAATGTTTACCCTTTTTGCCACTTTAGTTTGAACACTCTTATGTCCAATTGGAGAAGTTTTTCGTAACTTCATTGGATGGGATCTTATCTCCCTTTTGTATAATTTCATACTATCAATGAAATTGTTTTCTATCAAAAAAAAAAAAAAGAAAAATTATGAGTTAATATAACTCGATGCCTATTTATAGATAATAGACCTTTTTCAGTTGATGTTACCGACTGTAATTAAAAAATTATTAGCCAACTAACTGCCATGGTAAATTCCAGTTAGGAAGGTATATTAATAAAAAACCACATAAGCTAAGCACTGTTCACTAGTTATTAGCCTGTATCAGGTGCCCAATATATATTGGACATGACACTTTACCTTAACTATAACATCCACGCTACGTTTTATACTTAATGGTTTGCTGCCCCTTTAGGGTTCTAGGGTTTTGAGAATATTATTAGGATGGTAAGGGCATGTTAGTAATTAGCTAAGGAGTTTGTTAGTAGCAGTTGTTGTATAACAGAGTGAGTAGGAGGGGAGAAAGGTAGGCAATTGTTTAGTGGGTGTAGGCTTGAGTTAGAATACTTGAGAGGGGGTTCCAAGTACCTTGAATACTTGGGGGTTATATTGTAGTTCTTTATCTTTTATATTTCAATACTATTTTCGTTATTCGGTTTCTATCAGGTCTATAGTGTGACTTGCACCCTCCGGGGTGAGTGGTTATGGCATGAACTAGGTTCAATCCTTCTTTGTATCACACCATTTGGAAAATTCATGACTACCTTGATTTATGGTGTAAAAATTTTATAGACATATACATACGCAACAAGGTAGCCCAATTGGAGTCTTTCTGTAACTCCTTAGGTTTTGTGTGGAACTATTTTGTTCTCCCTTTATTATTTTTCTTTGGTTAATCAAAGGCAAGAAAAATCTTGAACTTGTAATGTATTATCTTCTGTTGATCCCATGTTTATGAACCATGTCAGTGATTAATGGCTATTTTATGAGCCTTTATTTGAAAAATCTAATAATTTCTCTCTTCAAAAGCTGAAAAATGTTAATATGAGGTTTCTTTTCTGTCTTGCTTGTTAACTTGGTAGTTTGAACCACTTTTAGAATGATTGCTCTCTTTTTCTCCTTTAAGCCATATTTTAAACTTCTTCCTGGTTTATATTGTTAGTGCAAATCCCTGTTGTTGCTCTAAATGATGATGGAAAAATAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAGCCTGTCAACAAGGAGAAAAGGAAACTGAAACTGAGCTGTATTCCTTTCTCACTAACATGCCTACTCCACAAGAACTACATCTTGGCAGACCCGACTGCAGAGGAGGAGTCTATTATGGAAACTATTGTGACTGTGGTCTTAGATTCGTCTGGTCAACTTGTGTCCTTCTACAAGCCCGGTGGATCCGTTCTTGCCTATACATCAGTTGTTCAGGTTGGTCTCTCCTTTCTCTGGCAAGTTTATTGATGGAATCCAATTCATTAGATAATGAATTAGTTCCCTCAATTTCTTCTTTCGTCACCTTTTCCCTGTCTATTCATTTTGGTGAAGCTTGTTGGATTTTCAATATGTTGTTGCATATCGGATTACTTATACTATAACAGTAATTTAGGCCTCGTTTGATAACCATTTTGTTTTTGGCCTTCTGTTTTTTAAAATTCTTCTTATAATGGAACTTATGTGTTTCTTTGTTTTGTTATCTACTTTTTGAAAATGTTTGTAAAATCTAAGCCAAATTTTGAAAACTAAAAAAAGTAGTTTTTTAAAACTTGTTTTTGTTTTTGAAATTTGGCTAAGAATTCAAATGCTTTTTTACGAAAGGTGAAAAACATACAAAGAGATTGTGAGGAAACAAACATAATTTTTAAAATTAGAAAACTCCAAACGAAATCATTATCAAACGAGGCCTTAAAGTGTTTGATTTTTCAAAAGTGTTCTGGAAAATTCTAATTGCACCTAAAAGCATCAATTGAGGAAGCATCTAATTGGTACTTATTAGTTTACTCTAAAAAATCATCTTAAACTCTAAAGATAATGAATTGACTCAGTTTTTTTTTTTGTTTATCAAGAAAACACTTTTGTTGATGTGCGAAAGGTTACAATATCATCCAAGCTTAAAAGTTTCTAACTCTTTTGCTTGATCTTACTTTAGGATGCACATTCTTTTTATAAAATAACATTAGGACTAGAGTAACTGGTATACAACAGTTGTGATTTTGCACCTCTCAAGTTACAATGATCTCATACTTCGTCTCTTGCTCTCAACATTTTTGTAATTTTCCCTTTTTTAATAGTTACCTAGCTATATAGACTTCGTTTGTTTGGTTTCTCTTTTTTTTTTTTTTATTGTCCATTTGTATTATTTCATTATAAGTTTGGTCTTGAACTTTAAAGTTTCAAGGTTGTGTCTAATATGTTCTTAAACTTTTAAAAGTATTAATAGGTCCCTGAACTTTAAGAAGTGCTAACAAGTCTCTTGTACTTTTAAAAGTGTCTAATAGTTTTCTGAATTTTAAGAAATGCTAACAAGTTTCTAAACTTTCAATTTTATATCTAATAAGTCTCTAAATTTTTAATTTTGTGTCTAATAGATTCATAACTTATAAGACACTTTAAAATTCATGGATCTGTTGGACACAAAATTAAAAATTCAAGAACTTATTAGACACAACTTTTTAAGTTTAGGGATTAAACTTGTAATTTAACCAATTTAAAGTCATGAATCTATTAGACACAGAATTGAAAGTTTCAAAAACTTTTTAAGCACAACTTTCAAAGTTCAAGGATCAAACTTGTAATTTAACTATTTTATTTTTTAAAATGAAAGCTTGGTTTTTAATTTTAAAAAAATTGTGATTAGTACAAGTGAATACTTCATAGCTTTAAGTTCTAATGCATGAGCGGATGGCACGGTTGCAGGATTGCGTTGCGTTGACAAGACAAAGAGTAAAGGAACTACAAATGATTTTAGATGAAGCCATTTCTGGTATGGAAATCGACTAA

mRNA sequence

ATTGAATGTTTTCCAAATCTGGGGTCGACGTGAATGGCGGAAGGGAAAGAGAGAGGGTAAGAGGTACCGGGTGGTGAGGAACGGGGCGCTGCGGCGGAGGTGGCACGGTCGAACCGGTTTCTGCGACGGTTTTCCAATGAGCCCAAATCGCTCGGATTTTCTTCGGTACTTCCTTCCATTAGACACGTTCCAGCTGCACCACAACGGGGGGCAATTGACACCTCGCGCTCGCTGCCTCCATTTTCATGCCGTCTCCACCTCCACGGCCGCCGCATTCATCTCCTTTGAAATCGCCGCAAGTCGCCGCCGAAGCCCACCGCAACTGAAGCCCCGCTGCTGGGTTTTGGATCGGAGAAAAGATAGACAAAGAAATAAGAAGAATACCCAAAGAATGGGATTGCCAAATGCTGCTTCTGGGGACTTGTCGTCAGAAATGGAGGTTGATGCTTTCAGACGACTCTTCCCACTTCAGTTTTATGAGCGTCATCTCGCTGAATCAATACGTCCTGATGGAAGAGCTCTTGGAAAAGCTAGAGACACGACCATAGCTCTTGGGCCGGTATCAACTGCGAACGGGTCAGCTCTGGCAAAGATTGGTTCTACGACAATGTTGGCTGCTATTAAAATGGAAGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGCTGCATAGCTATTGATTTCCATATGCCTCCAATATGCTCTCCGATTGTTAGGCCTGGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACACTATTTCAAGTTCTGGGATGATTGATCTGAGAGAATTATCTCTTGTTAAAGGAAAAGCTGCTTGGATGGCGTACCTGGATATTTATTGTTTGGATGCTGATGGATCTCTTTTTGATGCCGCACTTCTTTCTGCAGCTGCTGCATTTTCTCACTTGCAAATCCCTGTTGTTGCTCTAAATGATGATGGAAAAATAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAGCCTGTCAACAAGGAGAAAAGGAAACTGAAACTGAGCTGTATTCCTTTCTCACTAACATGCCTACTCCACAAGAACTACATCTTGGCAGACCCGACTGCAGAGGAGGAGTCTATTATGGAAACTATTGTGACTGTGGTCTTAGATTCGTCTGGTCAACTTGTGTCCTTCTACAAGCCCGGTGGATCCGTTCTTGCCTATACATCAGTTGTTCAGGATTGCGTTGCGTTGACAAGACAAAGAGTAAAGGAACTACAAATGATTTTAGATGAAGCCATTTCTGGTATGGAAATCGACTAA

Coding sequence (CDS)

ATTGAATGTTTTCCAAATCTGGGGTCGACGTGAATGGCGGAAGGGAAAGAGAGAGGGTAAGAGGTACCGGGTGGTGAGGAACGGGGCGCTGCGGCGGAGGTGGCACGGTCGAACCGGTTTCTGCGACGGTTTTCCAATGAGCCCAAATCGCTCGGATTTTCTTCGGTACTTCCTTCCATTAGACACGTTCCAGCTGCACCACAACGGGGGGCAATTGACACCTCGCGCTCGCTGCCTCCATTTTCATGCCGTCTCCACCTCCACGGCCGCCGCATTCATCTCCTTTGAAATCGCCGCAAGTCGCCGCCGAAGCCCACCGCAACTGAAGCCCCGCTGCTGGGTTTTGGATCGGAGAAAAGATAGACAAAGAAATAAGAAGAATACCCAAAGAATGGGATTGCCAAATGCTGCTTCTGGGGACTTGTCGTCAGAAATGGAGGTTGATGCTTTCAGACGACTCTTCCCACTTCAGTTTTATGAGCGTCATCTCGCTGAATCAATACGTCCTGATGGAAGAGCTCTTGGAAAAGCTAGAGACACGACCATAGCTCTTGGGCCGGTATCAACTGCGAACGGGTCAGCTCTGGCAAAGATTGGTTCTACGACAATGTTGGCTGCTATTAAAATGGAAGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGCTGCATAGCTATTGATTTCCATATGCCTCCAATATGCTCTCCGATTGTTAGGCCTGGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACACTATTTCAAGTTCTGGGATGATTGATCTGAGAGAATTATCTCTTGTTAAAGGAAAAGCTGCTTGGATGGCGTACCTGGATATTTATTGTTTGGATGCTGATGGATCTCTTTTTGATGCCGCACTTCTTTCTGCAGCTGCTGCATTTTCTCACTTGCAAATCCCTGTTGTTGCTCTAAATGATGATGGAAAAATAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAGCCTGTCAACAAGGAGAAAAGGAAACTGAAACTGAGCTGTATTCCTTTCTCACTAACATGCCTACTCCACAAGAACTACATCTTGGCAGACCCGACTGCAGAGGAGGAGTCTATTATGGAAACTATTGTGACTGTGGTCTTAGATTCGTCTGGTCAACTTGTGTCCTTCTACAAGCCCGGTGGATCCGTTCTTGCCTATACATCAGTTGTTCAGGATTGCGTTGCGTTGACAAGACAAAGAGTAAAGGAACTACAAATGATTTTAGATGAAGCCATTTCTGGTATGGAAATCGACTAA

Protein sequence

LNVFQIWGRREWRKGKREGKRYRVVRNGALRRRWHGRTGFCDGFPMSPNRSDFLRYFLPLDTFQLHHNGGQLTPRARCLHFHAVSTSTAAAFISFEIAASRRRSPPQLKPRCWVLDRRKDRQRNKKNTQRMGLPNAASGDLSSEMEVDAFRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKIVFVSEEEGGENFEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISGMEID

Homology

[Close]

BLAST of Sgr017304 vs. NCBI nr
Match: XP_022152237.1 (exosome complex component RRP43 [Momordica charantia])

HSP 1 Score: 571.2 bits (1471), Expect = 7.4e-159
Identity = 294/304 (96.71%), Postives = 300/304 (98.68%), Query Frame = 0


Query: 131 MGLPNAASGDLSSEMEVDAFRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTA 190
           MGLPNAASGDLSSEMEVDAFRRLFPLQFYERH AESIRPDGRALGKARDTTIALGPVS+A
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPLQFYERHFAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 191 NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI 250
           NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI 120

Query: 251 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 310
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 311 PVVALNDDGKIVFVSEEEGGENFEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAE 370
           PVVALNDDGK+VFVSEEEGGENFEKEPVNKEKRKLKLS IPFSLTC+LHKN+ILADPTAE
Sbjct: 181 PVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLSSIPFSLTCILHKNHILADPTAE 240

Query: 371 EESIMETIVTVVLDSSGQLVSFYKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISG 430
           EESIMETIVTVVLD SGQLVSFYKPGGSVLA+TS VQDCVALTRQRVKELQ+ILDEAISG
Sbjct: 241 EESIMETIVTVVLDLSGQLVSFYKPGGSVLAFTSAVQDCVALTRQRVKELQVILDEAISG 300

Query: 431 MEID 435
           MEID
Sbjct: 301 MEID 304

[Close]

BLAST of Sgr017304 vs. NCBI nr
Match: XP_023544252.1 (exosome complex component RRP43 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570.1 bits (1468), Expect = 1.7e-158
Identity = 291/304 (95.72%), Postives = 300/304 (98.68%), Query Frame = 0


Query: 131 MGLPNAASGDLSSEMEVDAFRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTA 190
           MGLPNAASGDLSSEMEVDAFRRLFP+QF+ERHLAESIRPDGRALGKARDTTIALGPVS+A
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 191 NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI 250
           NGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIA+DFHMPPICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVI 120

Query: 251 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 310
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 311 PVVALNDDGKIVFVSEEEGGENFEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAE 370
           PVVALNDDGK+VFVSEEEGGENFEKE VNKEKRKLKL+ +PFSLTCLLHKNYILADPTAE
Sbjct: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKEKRKLKLNSLPFSLTCLLHKNYILADPTAE 240

Query: 371 EESIMETIVTVVLDSSGQLVSFYKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISG 430
           EES+METIVTVVLDSSGQLVSFYKPGGSVLAYTS VQDCVALTRQR KELQMILDEAISG
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG 300

Query: 431 MEID 435
           MEID
Sbjct: 301 MEID 304

[Close]

BLAST of Sgr017304 vs. NCBI nr
Match: KAG7033523.1 (Exosome complex component RRP43 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 568.9 bits (1465), Expect = 3.7e-158
Identity = 290/304 (95.39%), Postives = 300/304 (98.68%), Query Frame = 0


Query: 131 MGLPNAASGDLSSEMEVDAFRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTA 190
           MGLPNAASGDLSSEMEVDAFRRLFP+QF+ERHLAESIRPDGRALGKARDTTIALGPVS+A
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 191 NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI 250
           NGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIA+DFHMPPICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVI 120

Query: 251 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 310
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 311 PVVALNDDGKIVFVSEEEGGENFEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAE 370
           PVVALNDDGK+VFVSEEEGGENFEKE VNKE+RKLKL+ +PFSLTCLLHKNYILADPTAE
Sbjct: 181 PVVALNDDGKVVFVSEEEGGENFEKEAVNKERRKLKLNSLPFSLTCLLHKNYILADPTAE 240

Query: 371 EESIMETIVTVVLDSSGQLVSFYKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISG 430
           EES+METIVTVVLDSSGQLVSFYKPGGSVLAYTS VQDCVALTRQR KELQMILDEAISG
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG 300

Query: 431 MEID 435
           MEID
Sbjct: 301 MEID 304

[Close]

BLAST of Sgr017304 vs. NCBI nr
Match: XP_022928740.1 (exosome complex component RRP43 [Cucurbita moschata])

HSP 1 Score: 568.2 bits (1463), Expect = 6.3e-158
Identity = 290/304 (95.39%), Postives = 299/304 (98.36%), Query Frame = 0


Query: 131 MGLPNAASGDLSSEMEVDAFRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTA 190
           MGLPNAASGDLSSEMEVDAFRRLFP+QF+ERHLAESIRPDGRALGKARDTTIALGPVS+A
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 191 NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI 250
           NGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIA+DFHMPPICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVI 120

Query: 251 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 310
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 311 PVVALNDDGKIVFVSEEEGGENFEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAE 370
           P VALNDDGK+VFVSEEEGGENFEKE VNKEKRKLKL+ +PFSLTCLLHKNYILADPTAE
Sbjct: 181 PFVALNDDGKVVFVSEEEGGENFEKEAVNKEKRKLKLNSLPFSLTCLLHKNYILADPTAE 240

Query: 371 EESIMETIVTVVLDSSGQLVSFYKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISG 430
           EES+METIVTVVLDSSGQLVSFYKPGGSVLAYTS VQDCVALTRQR KELQMILDEAISG
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG 300

Query: 431 MEID 435
           MEID
Sbjct: 301 MEID 304

[Close]

BLAST of Sgr017304 vs. NCBI nr
Match: XP_008460772.1 (PREDICTED: exosome complex component RRP43 isoform X1 [Cucumis melo])

HSP 1 Score: 567.8 bits (1462), Expect = 8.2e-158
Identity = 289/314 (92.04%), Postives = 304/314 (96.82%), Query Frame = 0


Query: 121 RQRNKKNTQRMGLPNAASGDLSSEMEVDAFRRLFPLQFYERHLAESIRPDGRALGKARDT 180
           ++  K   Q MGLPNAASGDLSS+MEVDAFRRLFP+QFYERHLAESIRPDGRALGKARDT
Sbjct: 3   KEAKKIIVQTMGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALGKARDT 62

Query: 181 TIALGPVSTANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRP 240
           TIALGPVS+ANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHMPP+CSPIVRP
Sbjct: 63  TIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRP 122

Query: 241 GRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS 300
           GRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS
Sbjct: 123 GRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS 182

Query: 301 AAAAFSHLQIPVVALNDDGKIVFVSEEEGGENFEKEPVNKEKRKLKLSCIPFSLTCLLHK 360
           AAAAFSHLQIPVVALNDDG++VFVSEEEGGENFEKEPVNKEKRKLKL+ +PFSLTCLLHK
Sbjct: 183 AAAAFSHLQIPVVALNDDGRVVFVSEEEGGENFEKEPVNKEKRKLKLNSVPFSLTCLLHK 242

Query: 361 NYILADPTAEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYTSVVQDCVALTRQRVKEL 420
            YILADPTAEEES+METIVTVVLDSSGQLVSFYKPGGSVLAYTS VQDC+ALTRQR KEL
Sbjct: 243 KYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKEL 302

Query: 421 QMILDEAISGMEID 435
           Q+ILDEAISGMEID
Sbjct: 303 QIILDEAISGMEID 316

[Close]

BLAST of Sgr017304 vs. ExPASy Swiss-Prot
Match: Q96B26 (Exosome complex component RRP43 OS=Homo sapiens OX=9606 GN=EXOSC8 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 9.4e-48
Identity = 102/284 (35.92%), Postives = 166/284 (58.45%), Query Frame = 0


Query: 150 FRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTANGSALAKIGSTTMLAAIKM 209
           F+ + PL++Y R L E+ RPDGR LG+ R TT+ +G +STA+GSAL K+G+TT++  +K 
Sbjct: 5   FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKA 64

Query: 210 EVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLREL 269
           E   PS ++PD+G +  +  +PP+CS   R G P E A V S+ ++D I +S +I   +L
Sbjct: 65  EFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124

Query: 270 SLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKIVFVSEEEG 329
            +  GK  W+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +  V+    
Sbjct: 125 CISPGKLVWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVN---- 184

Query: 330 GENFEKEPVNKEKRKLKLSCIPFSLT-CLLHKNYILADPTAEEESIMETIVTVVLDSSGQ 389
                     K+K  L +   P + +  +     ++ DPT EEE +    +T+V+D  G+
Sbjct: 185 ---------LKKKSYLNIRTHPVATSFAVFDDTLLIVDPTGEEEHLATGTLTIVMDEEGK 244

Query: 390 LVSFYKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISGME 433
           L   +KPGGS L   + +QDC++    R KE++ ++DE I  M+
Sbjct: 245 LCCLHKPGGSGLT-GAKLQDCMSRAVTRHKEVKKLMDEVIKSMK 274

[Close]

BLAST of Sgr017304 vs. ExPASy Swiss-Prot
Match: Q9D753 (Exosome complex component RRP43 OS=Mus musculus OX=10090 GN=Exosc8 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.7e-47
Identity = 105/282 (37.23%), Postives = 163/282 (57.80%), Query Frame = 0


Query: 150 FRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTANGSALAKIGSTTMLAAIKM 209
           F+ + PL++Y R L E+ RPDGR LG+ R TT+ +G +STA+GSAL K+G+TT++  +K 
Sbjct: 5   FKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSISTADGSALVKLGNTTVICGVKA 64

Query: 210 EVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLREL 269
           E   P +++PD G +  +  +PP+CS   R G P E A V S+ ++D + +S +I   +L
Sbjct: 65  EFAAPPVDAPDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDL 124

Query: 270 SLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKIVFVSEEEG 329
            +  GK AW+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +  V+ +  
Sbjct: 125 CISPGKLAWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLK-- 184

Query: 330 GENFEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAEEESIMETIVTVVLDSSGQL 389
               +K  +N     +  S   F  T L      + DPT EEE +    +TVV D  G+L
Sbjct: 185 ----KKSYLNVRTNPVATSFAVFDDTLL------IVDPTGEEEHLSTGTLTVVTDEDGKL 244

Query: 390 VSFYKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISGM 432
              +KPGGS L   + +QDC++    R KE+  +LDE I  M
Sbjct: 245 CCLHKPGGSGLT-GAKLQDCMSRAVTRHKEVSKLLDEVIQSM 273

[Close]

BLAST of Sgr017304 vs. ExPASy Swiss-Prot
Match: Q2KHU3 (Exosome complex component RRP43 OS=Bos taurus OX=9913 GN=EXOSC8 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.4e-45
Identity = 102/283 (36.04%), Postives = 163/283 (57.60%), Query Frame = 0


Query: 150 FRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTANGSALAKIGSTTMLAAIKM 209
           F+ + PL++Y R L E+ RPDGR LG+ R TT+ +G + TA+GSAL K+G+TT++  IK 
Sbjct: 5   FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNVGSIGTADGSALVKLGNTTVICGIKA 64

Query: 210 EVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLREL 269
           E   P  ++PD+G +  +  + P+CS   R G P E A V S+ ++D I +S +I   +L
Sbjct: 65  EFGAPPTDAPDKGYVVPNVDLSPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124

Query: 270 SLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKIVFVSEEEG 329
            +  GK AW+ Y D+ CL+ DG++ DA   +  AA  ++Q+P V +N++  +  V+ +  
Sbjct: 125 CISSGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLK-- 184

Query: 330 GENFEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAEEESIMETIVTVVLDSSGQL 389
               +K  +N     +  S   F  T L      + DPT EEE +    +TVV+D  G+L
Sbjct: 185 ----KKSCLNIRTHPVATSFAVFDDTLL------IVDPTEEEEHLATGTLTVVMDEEGRL 244

Query: 390 VSFYKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISGME 433
              +KPGGS L   + +QDC++    R KE++ ++DE    M+
Sbjct: 245 CCLHKPGGSGLT-GAKLQDCMSRAVTRHKEVKKLMDEVFKSMK 274

[Close]

BLAST of Sgr017304 vs. ExPASy Swiss-Prot
Match: Q10205 (Exosome complex component rrp43 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp43 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.0e-33
Identity = 84/267 (31.46%), Postives = 146/267 (54.68%), Query Frame = 0


Query: 150 FRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTANGSALAKIGSTTMLAAIKM 209
           F+++ P Q+    L + +R DGR++ + R+  I    +STANGSA+ + G    +  IK 
Sbjct: 17  FKKITPEQYLSHLLNQDVRSDGRSVSEFREIVINDNCISTANGSAIIRAGENVFVCGIKA 76

Query: 210 EVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLREL 269
           E+  P   SP+EG I  +  + P+CS   +PG P++ A V+S++L  T+  S +I+L+ L
Sbjct: 77  EIAEPFENSPNEGWIVPNLELSPLCSSKFKPGPPSDLAQVVSQELHQTLQQSNLINLQSL 136

Query: 270 SLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKIVFVSEEEG 329
            + + KAAW+ Y DI CL+ DGS FD A  +  AA   +++P    ++D + V  +    
Sbjct: 137 CIFEKKAAWVLYADIICLNYDGSAFDYAWAALFAALKTVKLPTAVWDEDLERVICA---- 196

Query: 330 GENFEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAEEESIMETIVTVVLDSSGQL 389
                    +   R ++LS    S +  +  + +LADPT EEE +    +T++L+SS  +
Sbjct: 197 ---------STLTRPVQLSTEVRSFSWSVFDDKLLADPTDEEEDLSTEFLTIMLNSSKNI 256

Query: 390 VSFYKPGGSVLAYTSVVQDCVALTRQR 417
           V   K GG+ +    +++ C+ + R +
Sbjct: 257 VKIIKLGGTHI-QPLLLKKCIEVARSK 269

[Close]

BLAST of Sgr017304 vs. ExPASy Swiss-Prot
Match: Q8TYC2 (Exosome complex component Rrp42 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) OX=190192 GN=rrp42 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 7.2e-32
Identity = 82/255 (32.16%), Postives = 142/255 (55.69%), Query Frame = 0


Query: 168 RPDGRALGKARDTTIALGPVSTANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAID 227
           R DGR   + R   +  G +S ANGSAL ++G+T ++  +K+EV  P  +SP+EG +A++
Sbjct: 23  RIDGRDFEEFRPIEVRAGVISKANGSALVRLGNTQLVVGVKLEVGRPYPDSPNEGALAVN 82

Query: 228 FHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCL 287
             + P+  P   PG P E A  +S+ +   I  S MIDL EL + +G+  W+ ++DI+ L
Sbjct: 83  AELVPLADPSFEPGPPDENAIELSRVVDRGIRESEMIDLEELCIEEGEHCWVTFVDIHVL 142

Query: 288 DADGSLFDAALLSAAAAFSHLQIPVVALNDDGKIVFVSEEEGGENFEKEPVNKEKRKLKL 347
           D DG+LFDA+++ + +A S  ++P   + DD               E E + ++   L +
Sbjct: 143 DHDGNLFDASMIGSVSALSITEVPKAEVVDD---------------EVEVMEEDTEPLAI 202

Query: 348 SCIPFSLTCLLHKNYILADPTAEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYTS-VV 407
           +  P S+T      Y+L DP  EEE IM+T +TV +  SG++ +  K  G +  +   ++
Sbjct: 203 NDFPISVTIAKVGEYLLVDPCLEEEVIMDTRLTVTVTESGEVCAVQK--GELGDFPEHLL 260

Query: 408 QDCVALTRQRVKELQ 422
           +D + L  ++ +E++
Sbjct: 263 EDAIDLATKKAEEVR 260

[Close]

BLAST of Sgr017304 vs. ExPASy TrEMBL
Match: A0A6J1DFM7 (exosome complex component RRP43 OS=Momordica charantia OX=3673 GN=LOC111020008 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 3.6e-159
Identity = 294/304 (96.71%), Postives = 300/304 (98.68%), Query Frame = 0


Query: 131 MGLPNAASGDLSSEMEVDAFRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTA 190
           MGLPNAASGDLSSEMEVDAFRRLFPLQFYERH AESIRPDGRALGKARDTTIALGPVS+A
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPLQFYERHFAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 191 NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI 250
           NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI 120

Query: 251 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 310
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 311 PVVALNDDGKIVFVSEEEGGENFEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAE 370
           PVVALNDDGK+VFVSEEEGGENFEKEPVNKEKRKLKLS IPFSLTC+LHKN+ILADPTAE
Sbjct: 181 PVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLSSIPFSLTCILHKNHILADPTAE 240

Query: 371 EESIMETIVTVVLDSSGQLVSFYKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISG 430
           EESIMETIVTVVLD SGQLVSFYKPGGSVLA+TS VQDCVALTRQRVKELQ+ILDEAISG
Sbjct: 241 EESIMETIVTVVLDLSGQLVSFYKPGGSVLAFTSAVQDCVALTRQRVKELQVILDEAISG 300

Query: 431 MEID 435
           MEID
Sbjct: 301 MEID 304

[Close]

BLAST of Sgr017304 vs. ExPASy TrEMBL
Match: A0A6J1ESF5 (exosome complex component RRP43 OS=Cucurbita moschata OX=3662 GN=LOC111435558 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 3.0e-158
Identity = 290/304 (95.39%), Postives = 299/304 (98.36%), Query Frame = 0


Query: 131 MGLPNAASGDLSSEMEVDAFRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTA 190
           MGLPNAASGDLSSEMEVDAFRRLFP+QF+ERHLAESIRPDGRALGKARDTTIALGPVS+A
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 191 NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI 250
           NGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIA+DFHMPPICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVI 120

Query: 251 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 310
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 311 PVVALNDDGKIVFVSEEEGGENFEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAE 370
           P VALNDDGK+VFVSEEEGGENFEKE VNKEKRKLKL+ +PFSLTCLLHKNYILADPTAE
Sbjct: 181 PFVALNDDGKVVFVSEEEGGENFEKEAVNKEKRKLKLNSLPFSLTCLLHKNYILADPTAE 240

Query: 371 EESIMETIVTVVLDSSGQLVSFYKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISG 430
           EES+METIVTVVLDSSGQLVSFYKPGGSVLAYTS VQDCVALTRQR KELQMILDEAISG
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG 300

Query: 431 MEID 435
           MEID
Sbjct: 301 MEID 304

[Close]

BLAST of Sgr017304 vs. ExPASy TrEMBL
Match: A0A1S3CEE1 (exosome complex component RRP43 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499535 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 4.0e-158
Identity = 287/304 (94.41%), Postives = 300/304 (98.68%), Query Frame = 0


Query: 131 MGLPNAASGDLSSEMEVDAFRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTA 190
           MGLPNAASGDLSS+MEVDAFRRLFP+QFYERHLAESIRPDGRALGKARDTTIALGPVS+A
Sbjct: 1   MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 191 NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI 250
           NGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHMPP+CSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPVI 120

Query: 251 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 310
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 311 PVVALNDDGKIVFVSEEEGGENFEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAE 370
           PVVALNDDG++VFVSEEEGGENFEKEPVNKEKRKLKL+ +PFSLTCLLHK YILADPTAE
Sbjct: 181 PVVALNDDGRVVFVSEEEGGENFEKEPVNKEKRKLKLNSVPFSLTCLLHKKYILADPTAE 240

Query: 371 EESIMETIVTVVLDSSGQLVSFYKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISG 430
           EES+METIVTVVLDSSGQLVSFYKPGGSVLAYTS VQDC+ALTRQR KELQ+ILDEAISG
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG 300

Query: 431 MEID 435
           MEID
Sbjct: 301 MEID 304

[Close]

BLAST of Sgr017304 vs. ExPASy TrEMBL
Match: A0A1S3CD66 (exosome complex component RRP43 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499535 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 4.0e-158
Identity = 289/314 (92.04%), Postives = 304/314 (96.82%), Query Frame = 0


Query: 121 RQRNKKNTQRMGLPNAASGDLSSEMEVDAFRRLFPLQFYERHLAESIRPDGRALGKARDT 180
           ++  K   Q MGLPNAASGDLSS+MEVDAFRRLFP+QFYERHLAESIRPDGRALGKARDT
Sbjct: 3   KEAKKIIVQTMGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALGKARDT 62

Query: 181 TIALGPVSTANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRP 240
           TIALGPVS+ANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHMPP+CSPIVRP
Sbjct: 63  TIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRP 122

Query: 241 GRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS 300
           GRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS
Sbjct: 123 GRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS 182

Query: 301 AAAAFSHLQIPVVALNDDGKIVFVSEEEGGENFEKEPVNKEKRKLKLSCIPFSLTCLLHK 360
           AAAAFSHLQIPVVALNDDG++VFVSEEEGGENFEKEPVNKEKRKLKL+ +PFSLTCLLHK
Sbjct: 183 AAAAFSHLQIPVVALNDDGRVVFVSEEEGGENFEKEPVNKEKRKLKLNSVPFSLTCLLHK 242

Query: 361 NYILADPTAEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYTSVVQDCVALTRQRVKEL 420
            YILADPTAEEES+METIVTVVLDSSGQLVSFYKPGGSVLAYTS VQDC+ALTRQR KEL
Sbjct: 243 KYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKEL 302

Query: 421 QMILDEAISGMEID 435
           Q+ILDEAISGMEID
Sbjct: 303 QIILDEAISGMEID 316

[Close]

BLAST of Sgr017304 vs. ExPASy TrEMBL
Match: A0A6J1HVL5 (exosome complex component RRP43 OS=Cucurbita maxima OX=3661 GN=LOC111467240 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 2.0e-157
Identity = 289/304 (95.07%), Postives = 299/304 (98.36%), Query Frame = 0


Query: 131 MGLPNAASGDLSSEMEVDAFRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTA 190
           MGLPNAASGDLSSEMEVDAFRRLFP+QF+ERHLAESIRPDGRALGKARDTTIALGPVS+A
Sbjct: 1   MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSA 60

Query: 191 NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI 250
           NGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIA+DFHMP ICSPIVRPGRPAEAAPVI
Sbjct: 61  NGSALAKVGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPSICSPIVRPGRPAEAAPVI 120

Query: 251 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 310
           SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI
Sbjct: 121 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 180

Query: 311 PVVALNDDGKIVFVSEEEGGENFEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAE 370
           PVVALNDDGK+VFVSEE+GGENFEKE VNKEKRKLKL+ +PFSLTCLLHKNYILADPTAE
Sbjct: 181 PVVALNDDGKVVFVSEEKGGENFEKEAVNKEKRKLKLNSLPFSLTCLLHKNYILADPTAE 240

Query: 371 EESIMETIVTVVLDSSGQLVSFYKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISG 430
           EES+METIVTVVLDSSGQLVSFYKPGGSVLAYTS VQDCVALTRQR KELQMILDEAISG
Sbjct: 241 EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRSKELQMILDEAISG 300

Query: 431 MEID 435
           MEID
Sbjct: 301 MEID 304

[Close]

BLAST of Sgr017304 vs. TAIR 10
Match: AT1G60080.1 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 445.7 bits (1145), Expect = 4.4e-125
Identity = 232/307 (75.57%), Postives = 267/307 (86.97%), Query Frame = 0


Query: 131 MGLPNAASGDLSSEMEVDAFRRLFPLQFYERHLAESIRPDGRALGKARDTTIALGPVSTA 190
           MG+P+AA  DLS+EMEVDAFRR+FPL+F+ERHL+ES+RPDGR LGKARDT + LG VSTA
Sbjct: 1   MGIPDAAQ-DLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTA 60

Query: 191 NGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI 250
           +GSALAKIGSTTMLAAI+MEVMTPS +SPDEGCIAI+FHMPPICSP VRPGRPAEAAPVI
Sbjct: 61  DGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVI 120

Query: 251 SKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQI 310
           SK+LSDTI SSGMIDL+EL LV GKAAWM YLDIYCLDADG+LFDAALL+A AAFS+LQI
Sbjct: 121 SKRLSDTILSSGMIDLKELCLVSGKAAWMGYLDIYCLDADGALFDAALLAAVAAFSNLQI 180

Query: 311 PVVALNDDGKIVFVSEEEGGEN---FEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADP 370
           P+VALND+G+IV V+ E+  +N    EKE VNKEKRKL L  IPFSLTC+LHKNYILADP
Sbjct: 181 PIVALNDNGRIVAVTGEKDQDNALITEKEAVNKEKRKLTLKNIPFSLTCILHKNYILADP 240

Query: 371 TAEEESIMETIVTVVLDSSGQLVSFYKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEA 430
           T EEESIM+T+VTVVLDSS Q+VSFYK GG+ LAY+S ++ CV L R+R KEL+ IL E 
Sbjct: 241 TTEEESIMDTLVTVVLDSSDQMVSFYKSGGAALAYSSAIKSCVELARKRAKELKQILGE- 300

Query: 431 ISGMEID 435
              M+ID
Sbjct: 301 ---MDID 302

[Close]

BLAST of Sgr017304 vs. TAIR 10
Match: AT3G07750.1 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 103.2 bits (256), Expect = 5.3e-22
Identity = 82/280 (29.29%), Postives = 134/280 (47.86%), Query Frame = 0


Query: 158 FYERHLAESIRPDGRALGKARDTTIALGPVSTANGSALAKIGSTTMLAAIKMEVMTPSIE 217
           F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS  
Sbjct: 10  FIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVKAEIGRPSSL 69

Query: 218 SPDEGCIAIDFHMPPICSPIV--RPGR--PAEAAPVISKQLSDTISSSGM-IDLRELSLV 277
            PD+G +A+     P   P    R G    +E A  + + L    S +G  I+L  L + 
Sbjct: 70  QPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGAGINLSSLLIK 129

Query: 278 KGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKIVFVSEEEGGEN 337
           +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        K+   +E    E 
Sbjct: 130 EGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIP--------KVNVSAEVADDEQ 189

Query: 338 FEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAEEESIMETIVTVVLDSSGQLVSF 397
            E +  ++E  +   S +P  +T      + + D TAEEES M + V++ ++ +G +   
Sbjct: 190 PEIDISDEEYLQFDTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVSISVNRTGHICGL 249

Query: 398 YKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISGME 433
            K  GS L   SV+ D +++ +   + L   LD  IS  E
Sbjct: 250 TKRSGSGLD-PSVILDMISVAKHVTETLMSKLDSEISAAE 280

[Close]

BLAST of Sgr017304 vs. TAIR 10
Match: AT3G07750.2 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 103.2 bits (256), Expect = 5.3e-22
Identity = 82/280 (29.29%), Postives = 134/280 (47.86%), Query Frame = 0


Query: 158 FYERHLAESIRPDGRALGKARDTTIALGPVSTANGSALAKIGSTTMLAAIKMEVMTPSIE 217
           F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS  
Sbjct: 10  FIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVKAEIGRPSSL 69

Query: 218 SPDEGCIAIDFHMPPICSPIV--RPGR--PAEAAPVISKQLSDTISSSGM-IDLRELSLV 277
            PD+G +A+     P   P    R G    +E A  + + L    S +G  I+L  L + 
Sbjct: 70  QPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGAGINLSSLLIK 129

Query: 278 KGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKIVFVSEEEGGEN 337
           +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        K+   +E    E 
Sbjct: 130 EGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIP--------KVNVSAEVADDEQ 189

Query: 338 FEKEPVNKEKRKLKLSCIPFSLTCLLHKNYILADPTAEEESIMETIVTVVLDSSGQLVSF 397
            E +  ++E  +   S +P  +T      + + D TAEEES M + V++ ++ +G +   
Sbjct: 190 PEIDISDEEYLQFDTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVSISVNRTGHICGL 249

Query: 398 YKPGGSVLAYTSVVQDCVALTRQRVKELQMILDEAISGME 433
            K  GS L   SV+ D +++ +   + L   LD  IS  E
Sbjct: 250 TKRSGSGLD-PSVILDMISVAKHVTETLMSKLDSEISAAE 280

The following BLAST results are available for this feature:

BLAST of Sgr017304 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152237.1	7.4e-159	96.71	exosome complex component RRP43 [Momordica charantia]	[more]
XP_023544252.1	1.7e-158	95.72	exosome complex component RRP43 [Cucurbita pepo subsp. pepo]	[more]
KAG7033523.1	3.7e-158	95.39	Exosome complex component RRP43 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022928740.1	6.3e-158	95.39	exosome complex component RRP43 [Cucurbita moschata]	[more]
XP_008460772.1	8.2e-158	92.04	PREDICTED: exosome complex component RRP43 isoform X1 [Cucumis melo]	[more]

BLAST of Sgr017304 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96B26	9.4e-48	35.92	Exosome complex component RRP43 OS=Homo sapiens OX=9606 GN=EXOSC8 PE=1 SV=1	[more]
Q9D753	2.7e-47	37.23	Exosome complex component RRP43 OS=Mus musculus OX=10090 GN=Exosc8 PE=1 SV=1	[more]
Q2KHU3	7.4e-45	36.04	Exosome complex component RRP43 OS=Bos taurus OX=9913 GN=EXOSC8 PE=2 SV=1	[more]
Q10205	1.0e-33	31.46	Exosome complex component rrp43 OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]
Q8TYC2	7.2e-32	32.16	Exosome complex component Rrp42 OS=Methanopyrus kandleri (strain AV19 / DSM 6324...	[more]

BLAST of Sgr017304 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DFM7	3.6e-159	96.71	exosome complex component RRP43 OS=Momordica charantia OX=3673 GN=LOC111020008 P...	[more]
A0A6J1ESF5	3.0e-158	95.39	exosome complex component RRP43 OS=Cucurbita moschata OX=3662 GN=LOC111435558 PE...	[more]
A0A1S3CEE1	4.0e-158	94.41	exosome complex component RRP43 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034995...	[more]
A0A1S3CD66	4.0e-158	92.04	exosome complex component RRP43 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034995...	[more]
A0A6J1HVL5	2.0e-157	95.07	exosome complex component RRP43 OS=Cucurbita maxima OX=3661 GN=LOC111467240 PE=4...	[more]

BLAST of Sgr017304 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60080.1	4.4e-125	75.57	3'-5'-exoribonuclease family protein	[more]
AT3G07750.1	5.3e-22	29.29	3'-5'-exoribonuclease family protein	[more]
AT3G07750.2	5.3e-22	29.29	3'-5'-exoribonuclease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001247	Exoribonuclease, phosphorolytic domain 1	PFAM	PF01138	RNase_PH	coord: 178..311 e-value: 5.0E-21 score: 75.6
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 146..433 e-value: 1.2E-82 score: 279.4
IPR015847	Exoribonuclease, phosphorolytic domain 2	PFAM	PF03725	RNase_PH_C	coord: 350..399 e-value: 1.1E-4 score: 22.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..139
None	No IPR available	PANTHER	PTHR11097:SF28	SUBFAMILY NOT NAMED	coord: 140..434
None	No IPR available	PANTHER	PTHR11097	EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN	coord: 140..434
None	No IPR available	CDD	cd11369	RNase_PH_RRP43	coord: 151..424 e-value: 1.01209E-118 score: 344.926
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 148..373
IPR036345	Exoribonuclease, PH domain 2 superfamily	SUPERFAMILY	55666	Ribonuclease PH domain 2-like	coord: 345..428

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr017304.1	Sgr017304.1	mRNA