Homology
BLAST of Sgr017238 vs. NCBI nr
Match:
XP_022143855.1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Momordica charantia])
HSP 1 Score: 1434.1 bits (3711), Expect = 0.0e+00
Identity = 714/756 (94.44%), Postives = 737/756 (97.49%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSSKPISSSSIFFSTSVSDQLASSSSSNFTSSSPNVHLPPD 60
MAFTCVKCYPWSLPHAPLSFSSKPIS+SSIFFSTSVSDQLASS SSN SSSPN+HLPPD
Sbjct: 1 MAFTCVKCYPWSLPHAPLSFSSKPISNSSIFFSTSVSDQLASSYSSNLASSSPNLHLPPD 60
Query: 61 FTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRVLE 120
FTPKQLLETLRRQTDEVSALRVFNWASKQP+FVP+SSVYEE+LRKLGKAGSFE MRRVLE
Sbjct: 61 FTPKQLLETLRRQTDEVSALRVFNWASKQPNFVPNSSVYEEILRKLGKAGSFECMRRVLE 120
Query: 121 EMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVLVDA 180
E+KLSGC+VDRGIFLIF+ESYAKF+LYDEVM I+KVME EYRIKPDTRFYNVLLNVLVDA
Sbjct: 121 EIKLSGCDVDRGIFLIFVESYAKFELYDEVMDIVKVMEYEYRIKPDTRFYNVLLNVLVDA 180
Query: 181 NKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETTF 240
NKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETTF
Sbjct: 181 NKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETTF 240
Query: 241 TTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAAN 300
TTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAAN
Sbjct: 241 TTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAAN 300
Query: 301 EGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKVGEIEE 360
EGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCK+GEIEE
Sbjct: 301 EGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIEE 360
Query: 361 AVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVCTFNSLIQ 420
AVKILDQMVSRDCSPNAVTYNT+ISSLCKENRVEEATEIARLL+SKGILPDVCTFNSLIQ
Sbjct: 361 AVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLIQ 420
Query: 421 GLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEMESNGCAR 480
GLC SGNHRNAMELFEEMKGKGC PDEFTYNMLIDSLCSS RLEEALNLLKEMES+GCAR
Sbjct: 421 GLCLSGNHRNAMELFEEMKGKGCHPDEFTYNMLIDSLCSSRRLEEALNLLKEMESSGCAR 480
Query: 481 NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRRVEDAAHLM 540
NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG+SRDSVTYNTLIDGLCK RRVEDAAHLM
Sbjct: 481 NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSRRVEDAAHLM 540
Query: 541 DQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCKA 600
DQMIM GLKPDKFTYNSLLTHFCKAGDI+KAADIVQTMTSSGCNPDIVTYGTLIGGLC+A
Sbjct: 541 DQMIMEGLKPDKFTYNSLLTHFCKAGDIQKAADIVQTMTSSGCNPDIVTYGTLIGGLCRA 600
Query: 601 GRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKADPPDAITY 660
GRLQVASRLLRSIQMKGMVLTPQAYNP+IQALFKRNR HEAMRLFREM EKADPPDA+TY
Sbjct: 601 GRLQVASRLLRSIQMKGMVLTPQAYNPIIQALFKRNRNHEAMRLFREMLEKADPPDAVTY 660
Query: 661 KIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAMEDTLVKLVDMIM 720
KIVYRGLCNGGGPI EAVDFTVEMIERG IPEFSSFAMLAEGLCTLAM+DTLVKLVDMIM
Sbjct: 661 KIVYRGLCNGGGPIGEAVDFTVEMIERGKIPEFSSFAMLAEGLCTLAMDDTLVKLVDMIM 720
Query: 721 EKAKFSDSEISTIRGFLKIRKFQDGLSTLGGVLDGL 757
EKA FS+SEISTIRGFLKIRKFQD LSTL G+LD +
Sbjct: 721 EKANFSESEISTIRGFLKIRKFQDALSTLEGILDSI 756
BLAST of Sgr017238 vs. NCBI nr
Match:
XP_038881185.1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Benincasa hispida])
HSP 1 Score: 1412.1 bits (3654), Expect = 0.0e+00
Identity = 700/757 (92.47%), Postives = 733/757 (96.83%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSSKPISSSSIFFSTSVSDQLASSSSSNFTSSSPNV-HLPP 60
MA TCVKCYPWSLPH+PLSFSSKPIS+SSIFFS SVSDQL SSSSS FTSSSPNV HLP
Sbjct: 1 MALTCVKCYPWSLPHSPLSFSSKPISNSSIFFSASVSDQLPSSSSSKFTSSSPNVHHLPL 60
Query: 61 DFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRVL 120
DFTPKQL++ LRRQTDEV+ALRVFNWASKQP+FVPSSSVYEE+LRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIDALRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCE DRGIFLIF+ESYAKF+LYDEVMGI+K MEDEYR+KPDTRFYNVLLNVLV+
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYAKFELYDEVMGIVKEMEDEYRMKPDTRFYNVLLNVLVE 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHD+STFNILIKALCKAHQ+RPAILMMEEMP+YGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTT+MQGYIEEGNLDGALRIKEQM EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA
Sbjct: 241 FTTIMQGYIEEGNLDGALRIKEQMAEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKVGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHA+HAMEVVDAMLLGGFDPDIYTYNSLISGLCK+GEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHARHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVCTFNSLI 420
EAV ILDQMVSRDC+PNAVTYNT+ISSLCK NRVEEATEIARLL+SKG+LPDVCTFNSLI
Sbjct: 361 EAVTILDQMVSRDCTPNAVTYNTIISSLCKANRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEMESNGCA 480
QGLC SGNHRNA+ELFEEMKGKGCRPDEFTYNMLI SLCSS +LEEALNLLKEME +GCA
Sbjct: 421 QGLCLSGNHRNAVELFEEMKGKGCRPDEFTYNMLIGSLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG+SRDSVTYNTLIDGLCK +RVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAHL 540
Query: 541 MDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIM GLKPDKFTYNSLLTHFCK GDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKADPPDAIT 660
AGR+QVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLF+EM EKADPPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFKEMLEKADPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPI EAVDFTVEMIERGNIPEFSSF MLAEGLCTL+MEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMEDTLVKLVDMI 720
Query: 721 MEKAKFSDSEISTIRGFLKIRKFQDGLSTLGGVLDGL 757
MEKAKFS+SEISTIRGFLKI+KFQD LSTLGG+LD L
Sbjct: 721 MEKAKFSESEISTIRGFLKIQKFQDALSTLGGILDDL 757
BLAST of Sgr017238 vs. NCBI nr
Match:
XP_008447642.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Cucumis melo] >KAA0032618.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK23499.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1407.1 bits (3641), Expect = 0.0e+00
Identity = 697/757 (92.07%), Postives = 730/757 (96.43%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSSKPISSSSIFFSTSVSDQLASSSSSNFTSSSPNVH-LPP 60
MAFTCVKCYPWSLPH PLSFSSKPIS+SSIFFS SVSDQLASSSSSNFTSSSPNVH LPP
Sbjct: 1 MAFTCVKCYPWSLPHVPLSFSSKPISNSSIFFSASVSDQLASSSSSNFTSSSPNVHQLPP 60
Query: 61 DFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRVL 120
DFTPKQL+ETLRRQTDEV+ALRVFNWASKQP+FVPSSSVYEE+LRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCE DRGIFLIF+ESY KF+LYDEVMGI+KVMEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVMGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQ+RPAILMMEEMP+YGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTT+MQGYIE GNLDGALRIKEQM+EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMIEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKVGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGG DPDIYTYNSLISG CK+GEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGFCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYNT+ISSLCKENRVEEATEIARLL+SKG+LPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEMESNGCA 480
QGLC S NH+NAMELFEEMKGKGCRPDEFTYNMLI+SLCSS +LEEALNLLKEME +GCA
Sbjct: 421 QGLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIESLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG+SRDSVTYN LIDGLCK +RVEDAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIM GL+PDKFTYNSLLTHFCK GDIKKAADIVQTMTSSGCNPDIVTYGTLI GLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKADPPDAIT 660
AGR+QVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREM EK++PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPI EAVDFTVEMIERGNIPE+SSF MLAEGL TL+M+DTL+KLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEYSSFIMLAEGLYTLSMDDTLLKLVDMI 720
Query: 721 MEKAKFSDSEISTIRGFLKIRKFQDGLSTLGGVLDGL 757
MEKAKF + EISTIRGFLKIRKFQD LSTLGG+LD +
Sbjct: 721 MEKAKFKEREISTIRGFLKIRKFQDALSTLGGILDDM 757
BLAST of Sgr017238 vs. NCBI nr
Match:
XP_004142210.1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Cucumis sativus] >KGN54537.2 hypothetical protein Csa_017913 [Cucumis sativus])
HSP 1 Score: 1398.6 bits (3619), Expect = 0.0e+00
Identity = 694/757 (91.68%), Postives = 729/757 (96.30%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSSKPISSSSIFFSTSVSDQLASSSSSNFTSSSPNV-HLPP 60
MAFTCVKCYPWSLPHAPLSFSSKPIS+SSIFFS S+SDQLASSSSSN TSSS V HLPP
Sbjct: 1 MAFTCVKCYPWSLPHAPLSFSSKPISNSSIFFSASLSDQLASSSSSNSTSSSHIVHHLPP 60
Query: 61 DFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRVL 120
DFTPKQL+ETLRRQTDEV+ALRVFNWASKQP+FVPSSSVYEE+LRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCE DRGIFLIF+ESY KF+LYDEV+GI+KVMEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQ+RPAILMMEEMP+YGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTT+MQGYIE GNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKVGEIE 360
+EGFRPDQFTYNTLVNGLCK+GHAKHAMEVVDAMLLGG DPDIYTYNSLISGLCK+GEIE
Sbjct: 301 SEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYN +ISSLCKENRV+EATEIARLL+SKGILPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEMESNGCA 480
QGLC S NH++AM+LFEEMKGKGCRPDEFTYNMLIDSLCSS +LEEALNLLKEME NGCA
Sbjct: 421 QGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG+SRDSVTYNTLIDGLCK +RVEDAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIM GL+PDKFTYNSLLTHFCK GDIKKAADIVQTMTSSGCNPDIVTY TLI GLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKADPPDAIT 660
AGR+QVASRLLRSIQMKGMVLTP AYNPVIQALFKRNRTHEAMRLFREM +K++PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPI EAVDFTVEMIERGNIPEFSSF MLAEGLCTL+M+DTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMI 720
Query: 721 MEKAKFSDSEISTIRGFLKIRKFQDGLSTLGGVLDGL 757
MEKAKFS+ EISTIRGFLKIRKFQD LSTLGG+LD +
Sbjct: 721 MEKAKFSEREISTIRGFLKIRKFQDALSTLGGILDDM 757
BLAST of Sgr017238 vs. NCBI nr
Match:
KAG6595306.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1385.5 bits (3585), Expect = 0.0e+00
Identity = 692/757 (91.41%), Postives = 721/757 (95.24%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSSKPISSSSIFFSTSVSDQLASSSSSNFTSSSPNV-HLPP 60
MAFTCVKCYPWSLPH+PLSF SKPIS+SSIFFS SVSDQLASSSSSN +SSSPNV HLPP
Sbjct: 1 MAFTCVKCYPWSLPHSPLSFPSKPISNSSIFFSNSVSDQLASSSSSNSSSSSPNVHHLPP 60
Query: 61 DFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRVL 120
DFTPKQL+ETLRRQTDEVSALRVFNWASKQ +FVPSSSVYEE+LRKLGK GSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVSALRVFNWASKQRNFVPSSSVYEEILRKLGKVGSFEYMRRVL 120
Query: 121 EEMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVLVD 180
EEMK+SGCE+DRGIFLIF+ESYA F+LYDEVM I+KVMEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKVSGCEIDRGIFLIFVESYANFELYDEVMNIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDV+TFNILI ALCKAHQIRPAILMMEEMP+YGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVTTFNILINALCKAHQIRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTT+MQGYIEEGN DGALRIKEQMVEYGC CTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEEGNFDGALRIKEQMVEYGCSCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKVGEIE 360
NEGF PDQFTYNTLVNGLCKVGH KHAMEVVDAMLL G DPDIYTYNSLISGLCK+GEIE
Sbjct: 301 NEGFCPDQFTYNTLVNGLCKVGHPKHAMEVVDAMLLEGLDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVCTFNSLI 420
EAVK+LDQMVSRDCSPN+VTYN LISSLCKENRVEEATEIARLL+SKGILPDVCTFNSLI
Sbjct: 361 EAVKLLDQMVSRDCSPNSVTYNILISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEMESNGCA 480
QGLC S +HRNAM+LFEEMKGKGCRPDEFTYNMLI SLCSSG+L EALNLLKEME++GCA
Sbjct: 421 QGLCMSSSHRNAMDLFEEMKGKGCRPDEFTYNMLIGSLCSSGKLGEALNLLKEMETSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG+SRDSVTYN LIDGLCK RRVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSRRVEDAAHL 540
Query: 541 MDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIM GLKPDKFTYNSLLTHFCK GDIKKAADIVQTM SSGC+PDIVTYGTLIGGLCK
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMASSGCDPDIVTYGTLIGGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKADPPDAIT 660
AGR+QVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRT EAMRLFREMSEKA PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTLEAMRLFREMSEKAAPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPI EAVDFTVEMIE+GNIPE SSF MLAEGLCTL MEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIEKGNIPEISSFVMLAEGLCTLGMEDTLVKLVDMI 720
Query: 721 MEKAKFSDSEISTIRGFLKIRKFQDGLSTLGGVLDGL 757
MEKAKF +SEISTIRGFLKIRKF D LSTLGG+LD L
Sbjct: 721 MEKAKFLESEISTIRGFLKIRKFHDALSTLGGILDDL 757
BLAST of Sgr017238 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 1028.9 bits (2659), Expect = 3.6e-299
Identity = 505/763 (66.19%), Postives = 633/763 (82.96%), Query Frame = 0
Query: 1 MAF-TCVKCYPWS------LPHAPLSFSSKPISSSSIFFSTSVSDQLASSSSSNFTSSSP 60
MAF +C+K YP+S L H S + P SS+I F++ S L+S
Sbjct: 1 MAFSSCLKFYPFSISQAVTLTHHSFSLNLTP-PSSTISFASPHSAALSS----------- 60
Query: 61 NVHLPPDFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFE 120
T +LL++LR Q D+ +ALR+FN ASK+P+F P ++YEE+L +LG++GSF+
Sbjct: 61 --------TDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFD 120
Query: 121 YMRRVLEEMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVL 180
M+++LE+MK S CE+ FLI IESYA+F+L DE++ ++ M DE+ +KPDT FYN +
Sbjct: 121 DMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRM 180
Query: 181 LNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGL 240
LN+LVD N LKLVE +H+ M I+ DVSTFN+LIKALC+AHQ+RPAILM+E+MP+YGL
Sbjct: 181 LNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGL 240
Query: 241 SPDETTFTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALS 300
PDE TFTT+MQGYIEEG+LDGALRI+EQMVE+GC ++V+VNV+++GFCK+GR++ AL+
Sbjct: 241 VPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALN 300
Query: 301 FIQEAAN-EGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGL 360
FIQE +N +GF PDQ+T+NTLVNGLCK GH KHA+E++D ML G+DPD+YTYNS+ISGL
Sbjct: 301 FIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 360
Query: 361 CKVGEIEEAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDV 420
CK+GE++EAV++LDQM++RDCSPN VTYNTLIS+LCKEN+VEEATE+AR+L+SKGILPDV
Sbjct: 361 CKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 420
Query: 421 CTFNSLIQGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKE 480
CTFNSLIQGLC + NHR AMELFEEM+ KGC PDEFTYNMLIDSLCS G+L+EALN+LK+
Sbjct: 421 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 480
Query: 481 MESNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRR 540
ME +GCAR+V+ YNTLIDGFCK + EAEEIFDEME+ G+SR+SVTYNTLIDGLCK RR
Sbjct: 481 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 540
Query: 541 VEDAAHLMDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGT 600
VEDAA LMDQMIM G KPDK+TYNSLLTHFC+ GDIKKAADIVQ MTS+GC PDIVTYGT
Sbjct: 541 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 600
Query: 601 LIGGLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKA 660
LI GLCKAGR++VAS+LLRSIQMKG+ LTP AYNPVIQ LF++ +T EA+ LFREM E+
Sbjct: 601 LISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 660
Query: 661 D-PPDAITYKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAMEDT 720
+ PPDA++Y+IV+RGLCNGGGPI EAVDF VE++E+G +PEFSS MLAEGL TL+ME+T
Sbjct: 661 EAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET 720
Query: 721 LVKLVDMIMEKAKFSDSEISTIRGFLKIRKFQDGLSTLGGVLD 755
LVKLV+M+M+KA+FS+ E+S ++G LKIRKFQD L+TLGGVLD
Sbjct: 721 LVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLD 743
BLAST of Sgr017238 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 363.6 bits (932), Expect = 6.6e-99
Identity = 198/638 (31.03%), Postives = 324/638 (50.78%), Query Frame = 0
Query: 62 TPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRVLEE 121
TP QL + L + +++ +F+W Q + S VY+ ++ KLG G F+ + R+L +
Sbjct: 77 TPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQ 136
Query: 122 MKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVLVDAN 181
MK G +F+ + Y K + ++ M + Y +P + YNV+L +LV N
Sbjct: 137 MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGN 196
Query: 182 KLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETTFT 241
K+ + M+ R+I + TF +++KA C ++I A+ ++ +M +G P+ +
Sbjct: 197 CHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQ 256
Query: 242 TLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAANE 301
TL+ + ++ AL++ E+M GC T N +I G CK RI++A +
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316
Query: 302 GFRPDQFTYNTLVNGLCKVGHAKHAMEVV------------------------------- 361
GF PD TY L+NGLCK+G A ++
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 362 -DAMLLGGFDPDIYTYNSLISGLCKVGEIEEAVKILDQMVSRDCSPNAVTYNTLISSLCK 421
D + G PD+ TYNSLI G K G + A+++L M ++ C PN +Y L+ CK
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 422 ENRVEEATEIARLLSSKGILPDVCTFNSLIQGLCSSGNHRNAMELFEEMKGKGCRPDEFT 481
+++EA + +S+ G+ P+ FN LI C A+E+F EM KGC+PD +T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 482 YNMLIDSLCSSGRLEEALNLLKEMESNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 541
+N LI LC ++ AL LL++M S G N V YNTLI+ F + I+EA ++ +EM
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 542 LQGISRDSVTYNTLIDGLCKRRRVEDAAHLMDQMIMVGLKPDKFTYNSLLTHFCKAGDIK 601
QG D +TYN+LI GLC+ V+ A L ++M+ G P + N L+ C++G ++
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 602 KAADIVQTMTSSGCNPDIVTYGTLIGGLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVI 661
+A + + M G PDIVT+ +LI GLC+AGR++ + R +Q +G+ +N ++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 662 QALFKRNRTHEAMRLFREMSEKADPPDAITYKIVYRGL 668
L K ++A L E E P+ T+ I+ + +
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
BLAST of Sgr017238 vs. ExPASy Swiss-Prot
Match:
Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)
HSP 1 Score: 356.7 bits (914), Expect = 8.0e-97
Identity = 218/699 (31.19%), Postives = 335/699 (47.93%), Query Frame = 0
Query: 59 PDFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRV 118
P PK + ++ Q D + AL +FN K+ F + S Y V+ KLG G FE M V
Sbjct: 3 PPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEV 62
Query: 119 LEEMKLS-GCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVL 178
L +M+ + G + G+++ +++Y + E + + + M D Y +P YN +++VL
Sbjct: 63 LVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVL 122
Query: 179 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDE 238
VD+ + M R I DV +F I +K+ CK + A+ ++ M + G +
Sbjct: 123 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNV 182
Query: 239 TTFTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 298
+ T++ G+ EE + +M+ G T N L+ CK+G + + + +
Sbjct: 183 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 242
Query: 299 AANEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKVGE 358
G P+ FTYN + GLC+ G A+ +V ++ G PD+ TYN+LI GLCK +
Sbjct: 243 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 302
Query: 359 IEEAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVCTFNS 418
+EA L +MV+ P++ TYNTLI+ CK V+ A I G +PD T+ S
Sbjct: 303 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 362
Query: 419 LIQGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEMESNG 478
LI GLC G A+ LF E GKG +P+ YN LI L + G + EA L EM G
Sbjct: 363 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 422
Query: 479 CARNVVIYNTLIDGFCK-----------------------------------NKRIEEAE 538
V +N L++G CK ++E A
Sbjct: 423 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 482
Query: 539 EIFDEMELQGISRDSVTYNTLIDGLCKRRRVEDAAHLMDQMIMVGLKPDKFTYNSLLTHF 598
EI D M G+ D TYN+L++GLCK + ED M+ G P+ FT+N LL
Sbjct: 483 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 542
Query: 599 CKAGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCKAGRLQVASRLLRSIQ--MKGMVL 658
C+ + +A +++ M + NPD VT+GTLI G CK G L A L R ++ K
Sbjct: 543 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 602
Query: 659 TPQAYNPVIQALFKRNRTHEAMRLFREMSEKADPPDAITYKIVYRGLCNGGGPIAEAVDF 718
TP YN +I A ++ A +LF+EM ++ PD TY+++ G C G + F
Sbjct: 603 TP-TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN-VNLGYKF 662
Query: 719 TVEMIERGNIPEFSSFAMLAEGLCTLAMEDTLVKLVDMI 720
+EM+E G IP ++ + LC +ED + + +I
Sbjct: 663 LLEMMENGFIPSLTTLGRVINCLC---VEDRVYEAAGII 695
BLAST of Sgr017238 vs. ExPASy Swiss-Prot
Match:
Q9SS81 (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX=3702 GN=At3g09060 PE=2 SV=1)
HSP 1 Score: 337.8 bits (865), Expect = 3.9e-91
Identity = 187/651 (28.73%), Postives = 336/651 (51.61%), Query Frame = 0
Query: 55 VHLPPDFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEY 114
V P +PK +L+ L+ + + +A +F+ A++ P + S+ VY +LR+L + +
Sbjct: 2 VVFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNH 61
Query: 115 MRRVLEEMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLL 174
+ R++E ++ C+ D + L I++Y K + D+ + + K M + + +P R YN LL
Sbjct: 62 VSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLL 121
Query: 175 NVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLS 234
N V+A + VES + + ++ T+N+LIK CK + A ++ M G
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK 181
Query: 235 PDETTFTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSF 294
PD +++T++ + G LD AL + ++M E G N+LI+GF K+ A+
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 295 IQEAANE-GFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLC 354
+ P+ T+N +++GL K G +++ + M + D+YTY+SLI GLC
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 355 KVGEIEEAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVC 414
G +++A + +++ R S + VTYNT++ C+ +++E+ E+ R++ K + ++
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIV 361
Query: 415 TFNSLIQGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEM 474
++N LI+GL +G A ++ M KG D+ TY + I LC +G + +AL +++E+
Sbjct: 362 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 421
Query: 475 ESNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRRV 534
ES+G +V Y ++ID CK KR+EEA + EM G+ +S N LI GL + R+
Sbjct: 422 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 481
Query: 535 EDAAHLMDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGTL 594
+A+ + +M G +P +YN L+ CKAG +A+ V+ M +G PD+ TY L
Sbjct: 482 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 541
Query: 595 IGGLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKAD 654
+ GLC+ ++ +A L G+ +N +I L + +AM + M +
Sbjct: 542 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 601
Query: 655 PPDAITYKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLC 705
+ +TY + G G V + M + G P+ S+ + +GLC
Sbjct: 602 TANLVTYNTLMEGFFKVGDSNRATVIWGY-MYKMGLQPDIISYNTIMKGLC 650
BLAST of Sgr017238 vs. ExPASy Swiss-Prot
Match:
Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)
HSP 1 Score: 331.6 bits (849), Expect = 2.8e-89
Identity = 185/547 (33.82%), Postives = 289/547 (52.83%), Query Frame = 0
Query: 170 YNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMP 229
+N LL+ + NK LV S M RI +D+ ++NILI C+ Q+ A+ ++ +M
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 230 NYGLSPDETTFTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRID 289
G PD T ++L+ GY + A+ + +QM VT N LI+G +
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 290 QALSFIQEAANEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLI 349
+A++ I G +PD FTY T+VNGLCK G A+ ++ M G + D+ Y ++I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 350 SGLCKVGEIEEAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGIL 409
LC + +A+ + +M ++ PN VTYN+LI LC R +A+ + + + I
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 410 PDVCTFNSLIQGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNL 469
P+V TF++LI G A +L++EM + PD FTY+ LI+ C RL+EA ++
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 470 LKEMESNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCK 529
+ M S C NVV YNTLI GFCK KR+EE E+F EM +G+ ++VTYNTLI GL +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 530 RRRVEDAAHLMDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVT 589
+ A + +M+ G+ PD TY+ LL CK G ++KA + + + S PDI T
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 590 YGTLIGGLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMS 649
Y +I G+CKAG+++ L S+ +KG+ Y +I ++ EA LFREM
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 650 EKADPPDAITYKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAME 709
E P++ TY + R G A A + EM G + + S+ +M+ L +E
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASA-ELIKEMRSCGFVGDASTISMVINMLHDGRLE 622
Query: 710 DTLVKLV 717
+ ++++
Sbjct: 623 KSYLEML 628
BLAST of Sgr017238 vs. ExPASy TrEMBL
Match:
A0A6J1CPZ4 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013667 PE=4 SV=1)
HSP 1 Score: 1434.1 bits (3711), Expect = 0.0e+00
Identity = 714/756 (94.44%), Postives = 737/756 (97.49%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSSKPISSSSIFFSTSVSDQLASSSSSNFTSSSPNVHLPPD 60
MAFTCVKCYPWSLPHAPLSFSSKPIS+SSIFFSTSVSDQLASS SSN SSSPN+HLPPD
Sbjct: 1 MAFTCVKCYPWSLPHAPLSFSSKPISNSSIFFSTSVSDQLASSYSSNLASSSPNLHLPPD 60
Query: 61 FTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRVLE 120
FTPKQLLETLRRQTDEVSALRVFNWASKQP+FVP+SSVYEE+LRKLGKAGSFE MRRVLE
Sbjct: 61 FTPKQLLETLRRQTDEVSALRVFNWASKQPNFVPNSSVYEEILRKLGKAGSFECMRRVLE 120
Query: 121 EMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVLVDA 180
E+KLSGC+VDRGIFLIF+ESYAKF+LYDEVM I+KVME EYRIKPDTRFYNVLLNVLVDA
Sbjct: 121 EIKLSGCDVDRGIFLIFVESYAKFELYDEVMDIVKVMEYEYRIKPDTRFYNVLLNVLVDA 180
Query: 181 NKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETTF 240
NKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETTF
Sbjct: 181 NKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETTF 240
Query: 241 TTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAAN 300
TTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAAN
Sbjct: 241 TTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAAN 300
Query: 301 EGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKVGEIEE 360
EGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCK+GEIEE
Sbjct: 301 EGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKLGEIEE 360
Query: 361 AVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVCTFNSLIQ 420
AVKILDQMVSRDCSPNAVTYNT+ISSLCKENRVEEATEIARLL+SKGILPDVCTFNSLIQ
Sbjct: 361 AVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLIQ 420
Query: 421 GLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEMESNGCAR 480
GLC SGNHRNAMELFEEMKGKGC PDEFTYNMLIDSLCSS RLEEALNLLKEMES+GCAR
Sbjct: 421 GLCLSGNHRNAMELFEEMKGKGCHPDEFTYNMLIDSLCSSRRLEEALNLLKEMESSGCAR 480
Query: 481 NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRRVEDAAHLM 540
NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG+SRDSVTYNTLIDGLCK RRVEDAAHLM
Sbjct: 481 NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSRRVEDAAHLM 540
Query: 541 DQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCKA 600
DQMIM GLKPDKFTYNSLLTHFCKAGDI+KAADIVQTMTSSGCNPDIVTYGTLIGGLC+A
Sbjct: 541 DQMIMEGLKPDKFTYNSLLTHFCKAGDIQKAADIVQTMTSSGCNPDIVTYGTLIGGLCRA 600
Query: 601 GRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKADPPDAITY 660
GRLQVASRLLRSIQMKGMVLTPQAYNP+IQALFKRNR HEAMRLFREM EKADPPDA+TY
Sbjct: 601 GRLQVASRLLRSIQMKGMVLTPQAYNPIIQALFKRNRNHEAMRLFREMLEKADPPDAVTY 660
Query: 661 KIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAMEDTLVKLVDMIM 720
KIVYRGLCNGGGPI EAVDFTVEMIERG IPEFSSFAMLAEGLCTLAM+DTLVKLVDMIM
Sbjct: 661 KIVYRGLCNGGGPIGEAVDFTVEMIERGKIPEFSSFAMLAEGLCTLAMDDTLVKLVDMIM 720
Query: 721 EKAKFSDSEISTIRGFLKIRKFQDGLSTLGGVLDGL 757
EKA FS+SEISTIRGFLKIRKFQD LSTL G+LD +
Sbjct: 721 EKANFSESEISTIRGFLKIRKFQDALSTLEGILDSI 756
BLAST of Sgr017238 vs. ExPASy TrEMBL
Match:
A0A5A7SQ06 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00010 PE=4 SV=1)
HSP 1 Score: 1407.1 bits (3641), Expect = 0.0e+00
Identity = 697/757 (92.07%), Postives = 730/757 (96.43%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSSKPISSSSIFFSTSVSDQLASSSSSNFTSSSPNVH-LPP 60
MAFTCVKCYPWSLPH PLSFSSKPIS+SSIFFS SVSDQLASSSSSNFTSSSPNVH LPP
Sbjct: 1 MAFTCVKCYPWSLPHVPLSFSSKPISNSSIFFSASVSDQLASSSSSNFTSSSPNVHQLPP 60
Query: 61 DFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRVL 120
DFTPKQL+ETLRRQTDEV+ALRVFNWASKQP+FVPSSSVYEE+LRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCE DRGIFLIF+ESY KF+LYDEVMGI+KVMEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVMGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQ+RPAILMMEEMP+YGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTT+MQGYIE GNLDGALRIKEQM+EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMIEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKVGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGG DPDIYTYNSLISG CK+GEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGFCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYNT+ISSLCKENRVEEATEIARLL+SKG+LPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEMESNGCA 480
QGLC S NH+NAMELFEEMKGKGCRPDEFTYNMLI+SLCSS +LEEALNLLKEME +GCA
Sbjct: 421 QGLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIESLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG+SRDSVTYN LIDGLCK +RVEDAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIM GL+PDKFTYNSLLTHFCK GDIKKAADIVQTMTSSGCNPDIVTYGTLI GLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKADPPDAIT 660
AGR+QVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREM EK++PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPI EAVDFTVEMIERGNIPE+SSF MLAEGL TL+M+DTL+KLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEYSSFIMLAEGLYTLSMDDTLLKLVDMI 720
Query: 721 MEKAKFSDSEISTIRGFLKIRKFQDGLSTLGGVLDGL 757
MEKAKF + EISTIRGFLKIRKFQD LSTLGG+LD +
Sbjct: 721 MEKAKFKEREISTIRGFLKIRKFQDALSTLGGILDDM 757
BLAST of Sgr017238 vs. ExPASy TrEMBL
Match:
A0A1S3BHC3 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490047 PE=4 SV=1)
HSP 1 Score: 1407.1 bits (3641), Expect = 0.0e+00
Identity = 697/757 (92.07%), Postives = 730/757 (96.43%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSSKPISSSSIFFSTSVSDQLASSSSSNFTSSSPNVH-LPP 60
MAFTCVKCYPWSLPH PLSFSSKPIS+SSIFFS SVSDQLASSSSSNFTSSSPNVH LPP
Sbjct: 1 MAFTCVKCYPWSLPHVPLSFSSKPISNSSIFFSASVSDQLASSSSSNFTSSSPNVHQLPP 60
Query: 61 DFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRVL 120
DFTPKQL+ETLRRQTDEV+ALRVFNWASKQP+FVPSSSVYEE+LRKLGKAGSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCE DRGIFLIF+ESY KF+LYDEVMGI+KVMEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVMGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQ+RPAILMMEEMP+YGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTT+MQGYIE GNLDGALRIKEQM+EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMIEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKVGEIE 360
NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGG DPDIYTYNSLISG CK+GEIE
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGFCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVCTFNSLI 420
EAVKILDQMVSRDCSPNAVTYNT+ISSLCKENRVEEATEIARLL+SKG+LPDVCTFNSLI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEMESNGCA 480
QGLC S NH+NAMELFEEMKGKGCRPDEFTYNMLI+SLCSS +LEEALNLLKEME +GCA
Sbjct: 421 QGLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIESLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG+SRDSVTYN LIDGLCK +RVEDAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIM GL+PDKFTYNSLLTHFCK GDIKKAADIVQTMTSSGCNPDIVTYGTLI GLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKADPPDAIT 660
AGR+QVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREM EK++PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPI EAVDFTVEMIERGNIPE+SSF MLAEGL TL+M+DTL+KLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEYSSFIMLAEGLYTLSMDDTLLKLVDMI 720
Query: 721 MEKAKFSDSEISTIRGFLKIRKFQDGLSTLGGVLDGL 757
MEKAKF + EISTIRGFLKIRKFQD LSTLGG+LD +
Sbjct: 721 MEKAKFKEREISTIRGFLKIRKFQDALSTLGGILDDM 757
BLAST of Sgr017238 vs. ExPASy TrEMBL
Match:
A0A6J1I5N1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471244 PE=4 SV=1)
HSP 1 Score: 1385.2 bits (3584), Expect = 0.0e+00
Identity = 691/757 (91.28%), Postives = 721/757 (95.24%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSSKPISSSSIFFSTSVSDQLASSSSSNFTSSSPNV-HLPP 60
MAFTCVKCYPWSLPH+PLSF SKPIS+SSIFFS SVSDQLASSSSSN +SSSPNV HLPP
Sbjct: 1 MAFTCVKCYPWSLPHSPLSFPSKPISNSSIFFSNSVSDQLASSSSSNSSSSSPNVHHLPP 60
Query: 61 DFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRVL 120
DFTPKQL+ETLRRQTDEVSALR+FNWASKQ +FVPSSSVYEE+LRKLGK GSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVSALRIFNWASKQRNFVPSSSVYEEILRKLGKVGSFEYMRRVL 120
Query: 121 EEMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCE+DRGIFLIF+ESYA F+LYDEVM I+KVMEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEIDRGIFLIFVESYANFELYDEVMNIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDV+TFNILI ALCKAHQIRPAILMMEEMP+YGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVTTFNILINALCKAHQIRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTT+MQGYIEEGN DGALRIKEQMVEYGC CTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEEGNFDGALRIKEQMVEYGCSCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKVGEIE 360
NEGF PDQFTYNTLVNGLCKVGH KHAMEVVDAMLL G DPDIYTYNSLISGLCK+GEIE
Sbjct: 301 NEGFCPDQFTYNTLVNGLCKVGHPKHAMEVVDAMLLEGLDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVCTFNSLI 420
EAVK+LDQMVSRDCSPN+VTYN LISSLCKENRVEEATEIARLL+SKGILPDVCTFNSLI
Sbjct: 361 EAVKLLDQMVSRDCSPNSVTYNILISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEMESNGCA 480
QGLC S +HRNAM+LFEEMKGKGCRPDEFTYNMLI SLCSSG+L EALNLLKEME++GCA
Sbjct: 421 QGLCMSSSHRNAMDLFEEMKGKGCRPDEFTYNMLIGSLCSSGKLVEALNLLKEMETSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRRVEDAAHL 540
RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG+SRDSVTYN LIDGLCK RRVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSRRVEDAAHL 540
Query: 541 MDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIM GLKPDKFTYNSLLTHFCK GDIKKAADIVQTM SSGC+PDIVTYGTLIGGLC+
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMASSGCDPDIVTYGTLIGGLCR 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKADPPDAIT 660
AGR+QVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRT EAMRLFREMSEKA PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTLEAMRLFREMSEKAAPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPI EAVDFTVEMIE+GNIPE SSF MLAEGLCTL MEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIEKGNIPEISSFVMLAEGLCTLGMEDTLVKLVDMI 720
Query: 721 MEKAKFSDSEISTIRGFLKIRKFQDGLSTLGGVLDGL 757
MEKAKF +SEISTIRGFLKIRKF D LSTLGG+LD L
Sbjct: 721 MEKAKFLESEISTIRGFLKIRKFHDALSTLGGILDDL 757
BLAST of Sgr017238 vs. ExPASy TrEMBL
Match:
A0A6J1HFU3 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463562 PE=4 SV=1)
HSP 1 Score: 1384.4 bits (3582), Expect = 0.0e+00
Identity = 691/757 (91.28%), Postives = 720/757 (95.11%), Query Frame = 0
Query: 1 MAFTCVKCYPWSLPHAPLSFSSKPISSSSIFFSTSVSDQLASSSSSNFTSSSPNV-HLPP 60
MAFTCVKCYPWSLPH+PLSF SKPIS+SSIFFS SVSDQLASSSSSN +SSSPNV HLPP
Sbjct: 1 MAFTCVKCYPWSLPHSPLSFPSKPISNSSIFFSNSVSDQLASSSSSNSSSSSPNVHHLPP 60
Query: 61 DFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRVL 120
DFTPKQL+ETLRRQTDEVSALR+FNWASKQ +FVPSSSVYEE+LRKLGK GSFEYMRRVL
Sbjct: 61 DFTPKQLIETLRRQTDEVSALRIFNWASKQRNFVPSSSVYEEILRKLGKVGSFEYMRRVL 120
Query: 121 EEMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVLVD 180
EEMKLSGCE+DRGIFLIF+ESYA F+LYDEVM I+KVMEDEYRIKPDTRFYNVLLNVLVD
Sbjct: 121 EEMKLSGCEIDRGIFLIFVESYANFELYDEVMNIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETT 240
ANKLKLVESAHSSMVRRRIRHDV+TFNILI ALCKAHQIRPAILMMEEMP+YGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVTTFNILINALCKAHQIRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAA 300
FTT+MQGYIEEGN DGALRIKEQMVEYGC CTDVTVNVLINGFCKQGRIDQALSFIQEA
Sbjct: 241 FTTIMQGYIEEGNFDGALRIKEQMVEYGCSCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKVGEIE 360
NEGF PDQFTYNTLVNGLCKVGH KHAMEVVDAMLL G DPDIYTYNSLISGLCK+GEIE
Sbjct: 301 NEGFCPDQFTYNTLVNGLCKVGHPKHAMEVVDAMLLEGLDPDIYTYNSLISGLCKLGEIE 360
Query: 361 EAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVCTFNSLI 420
EAVK+LDQMVSRDCSPN+VTYN LISSLCKENRVEEATEIARLL+SKGILPDVCTFNSLI
Sbjct: 361 EAVKLLDQMVSRDCSPNSVTYNILISSLCKENRVEEATEIARLLTSKGILPDVCTFNSLI 420
Query: 421 QGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEMESNGCA 480
QGLC S +HRNAM+LFEEMKGKGCRPDEFTYNMLI SLCSSG+L EALNLLKEME++GCA
Sbjct: 421 QGLCMSSSHRNAMDLFEEMKGKGCRPDEFTYNMLIGSLCSSGKLGEALNLLKEMETSGCA 480
Query: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRRVEDAAHL 540
RNVVIYNTLIDGFCKNKR EEAEEIFDEMELQG+SRDSVTYN LIDGLCK RRVEDAAHL
Sbjct: 481 RNVVIYNTLIDGFCKNKRTEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSRRVEDAAHL 540
Query: 541 MDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCK 600
MDQMIM GLKPDKFTYNSLLTHFCK GDIKKAADIVQTM SSGC+PDIVTYGTLIGGLCK
Sbjct: 541 MDQMIMEGLKPDKFTYNSLLTHFCKTGDIKKAADIVQTMASSGCDPDIVTYGTLIGGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKADPPDAIT 660
AGR+QVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRT EAMRLFREMSEKA PPDAIT
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTLEAMRLFREMSEKAAPPDAIT 660
Query: 661 YKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGPI EAVDFTVEMIE+GNIPE SSF MLAEGLCTL MEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIEKGNIPEISSFVMLAEGLCTLGMEDTLVKLVDMI 720
Query: 721 MEKAKFSDSEISTIRGFLKIRKFQDGLSTLGGVLDGL 757
MEKAKF +SEISTIRGFLKIRKF D LSTLGG+LD L
Sbjct: 721 MEKAKFLESEISTIRGFLKIRKFHDALSTLGGILDDL 757
BLAST of Sgr017238 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 1028.9 bits (2659), Expect = 2.6e-300
Identity = 505/763 (66.19%), Postives = 633/763 (82.96%), Query Frame = 0
Query: 1 MAF-TCVKCYPWS------LPHAPLSFSSKPISSSSIFFSTSVSDQLASSSSSNFTSSSP 60
MAF +C+K YP+S L H S + P SS+I F++ S L+S
Sbjct: 1 MAFSSCLKFYPFSISQAVTLTHHSFSLNLTP-PSSTISFASPHSAALSS----------- 60
Query: 61 NVHLPPDFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFE 120
T +LL++LR Q D+ +ALR+FN ASK+P+F P ++YEE+L +LG++GSF+
Sbjct: 61 --------TDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFD 120
Query: 121 YMRRVLEEMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVL 180
M+++LE+MK S CE+ FLI IESYA+F+L DE++ ++ M DE+ +KPDT FYN +
Sbjct: 121 DMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRM 180
Query: 181 LNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGL 240
LN+LVD N LKLVE +H+ M I+ DVSTFN+LIKALC+AHQ+RPAILM+E+MP+YGL
Sbjct: 181 LNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGL 240
Query: 241 SPDETTFTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALS 300
PDE TFTT+MQGYIEEG+LDGALRI+EQMVE+GC ++V+VNV+++GFCK+GR++ AL+
Sbjct: 241 VPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALN 300
Query: 301 FIQEAAN-EGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGL 360
FIQE +N +GF PDQ+T+NTLVNGLCK GH KHA+E++D ML G+DPD+YTYNS+ISGL
Sbjct: 301 FIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 360
Query: 361 CKVGEIEEAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDV 420
CK+GE++EAV++LDQM++RDCSPN VTYNTLIS+LCKEN+VEEATE+AR+L+SKGILPDV
Sbjct: 361 CKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 420
Query: 421 CTFNSLIQGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKE 480
CTFNSLIQGLC + NHR AMELFEEM+ KGC PDEFTYNMLIDSLCS G+L+EALN+LK+
Sbjct: 421 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 480
Query: 481 MESNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRR 540
ME +GCAR+V+ YNTLIDGFCK + EAEEIFDEME+ G+SR+SVTYNTLIDGLCK RR
Sbjct: 481 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 540
Query: 541 VEDAAHLMDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGT 600
VEDAA LMDQMIM G KPDK+TYNSLLTHFC+ GDIKKAADIVQ MTS+GC PDIVTYGT
Sbjct: 541 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 600
Query: 601 LIGGLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKA 660
LI GLCKAGR++VAS+LLRSIQMKG+ LTP AYNPVIQ LF++ +T EA+ LFREM E+
Sbjct: 601 LISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 660
Query: 661 D-PPDAITYKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAMEDT 720
+ PPDA++Y+IV+RGLCNGGGPI EAVDF VE++E+G +PEFSS MLAEGL TL+ME+T
Sbjct: 661 EAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET 720
Query: 721 LVKLVDMIMEKAKFSDSEISTIRGFLKIRKFQDGLSTLGGVLD 755
LVKLV+M+M+KA+FS+ E+S ++G LKIRKFQD L+TLGGVLD
Sbjct: 721 LVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLD 743
BLAST of Sgr017238 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 363.6 bits (932), Expect = 4.7e-100
Identity = 198/638 (31.03%), Postives = 324/638 (50.78%), Query Frame = 0
Query: 62 TPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRVLEE 121
TP QL + L + +++ +F+W Q + S VY+ ++ KLG G F+ + R+L +
Sbjct: 77 TPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQ 136
Query: 122 MKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVLVDAN 181
MK G +F+ + Y K + ++ M + Y +P + YNV+L +LV N
Sbjct: 137 MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGN 196
Query: 182 KLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDETTFT 241
K+ + M+ R+I + TF +++KA C ++I A+ ++ +M +G P+ +
Sbjct: 197 CHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQ 256
Query: 242 TLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAANE 301
TL+ + ++ AL++ E+M GC T N +I G CK RI++A +
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316
Query: 302 GFRPDQFTYNTLVNGLCKVGHAKHAMEVV------------------------------- 361
GF PD TY L+NGLCK+G A ++
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 362 -DAMLLGGFDPDIYTYNSLISGLCKVGEIEEAVKILDQMVSRDCSPNAVTYNTLISSLCK 421
D + G PD+ TYNSLI G K G + A+++L M ++ C PN +Y L+ CK
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 422 ENRVEEATEIARLLSSKGILPDVCTFNSLIQGLCSSGNHRNAMELFEEMKGKGCRPDEFT 481
+++EA + +S+ G+ P+ FN LI C A+E+F EM KGC+PD +T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 482 YNMLIDSLCSSGRLEEALNLLKEMESNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 541
+N LI LC ++ AL LL++M S G N V YNTLI+ F + I+EA ++ +EM
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 542 LQGISRDSVTYNTLIDGLCKRRRVEDAAHLMDQMIMVGLKPDKFTYNSLLTHFCKAGDIK 601
QG D +TYN+LI GLC+ V+ A L ++M+ G P + N L+ C++G ++
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 602 KAADIVQTMTSSGCNPDIVTYGTLIGGLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVI 661
+A + + M G PDIVT+ +LI GLC+AGR++ + R +Q +G+ +N ++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 662 QALFKRNRTHEAMRLFREMSEKADPPDAITYKIVYRGL 668
L K ++A L E E P+ T+ I+ + +
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
BLAST of Sgr017238 vs. TAIR 10
Match:
AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 356.7 bits (914), Expect = 5.7e-98
Identity = 218/699 (31.19%), Postives = 335/699 (47.93%), Query Frame = 0
Query: 59 PDFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEYMRRV 118
P PK + ++ Q D + AL +FN K+ F + S Y V+ KLG G FE M V
Sbjct: 3 PPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEV 62
Query: 119 LEEMKLS-GCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLLNVL 178
L +M+ + G + G+++ +++Y + E + + + M D Y +P YN +++VL
Sbjct: 63 LVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVL 122
Query: 179 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLSPDE 238
VD+ + M R I DV +F I +K+ CK + A+ ++ M + G +
Sbjct: 123 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNV 182
Query: 239 TTFTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 298
+ T++ G+ EE + +M+ G T N L+ CK+G + + + +
Sbjct: 183 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 242
Query: 299 AANEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLCKVGE 358
G P+ FTYN + GLC+ G A+ +V ++ G PD+ TYN+LI GLCK +
Sbjct: 243 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 302
Query: 359 IEEAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVCTFNS 418
+EA L +MV+ P++ TYNTLI+ CK V+ A I G +PD T+ S
Sbjct: 303 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 362
Query: 419 LIQGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEMESNG 478
LI GLC G A+ LF E GKG +P+ YN LI L + G + EA L EM G
Sbjct: 363 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 422
Query: 479 CARNVVIYNTLIDGFCK-----------------------------------NKRIEEAE 538
V +N L++G CK ++E A
Sbjct: 423 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 482
Query: 539 EIFDEMELQGISRDSVTYNTLIDGLCKRRRVEDAAHLMDQMIMVGLKPDKFTYNSLLTHF 598
EI D M G+ D TYN+L++GLCK + ED M+ G P+ FT+N LL
Sbjct: 483 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 542
Query: 599 CKAGDIKKAADIVQTMTSSGCNPDIVTYGTLIGGLCKAGRLQVASRLLRSIQ--MKGMVL 658
C+ + +A +++ M + NPD VT+GTLI G CK G L A L R ++ K
Sbjct: 543 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 602
Query: 659 TPQAYNPVIQALFKRNRTHEAMRLFREMSEKADPPDAITYKIVYRGLCNGGGPIAEAVDF 718
TP YN +I A ++ A +LF+EM ++ PD TY+++ G C G + F
Sbjct: 603 TP-TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN-VNLGYKF 662
Query: 719 TVEMIERGNIPEFSSFAMLAEGLCTLAMEDTLVKLVDMI 720
+EM+E G IP ++ + LC +ED + + +I
Sbjct: 663 LLEMMENGFIPSLTTLGRVINCLC---VEDRVYEAAGII 695
BLAST of Sgr017238 vs. TAIR 10
Match:
AT3G09060.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 337.8 bits (865), Expect = 2.7e-92
Identity = 187/651 (28.73%), Postives = 336/651 (51.61%), Query Frame = 0
Query: 55 VHLPPDFTPKQLLETLRRQTDEVSALRVFNWASKQPSFVPSSSVYEEVLRKLGKAGSFEY 114
V P +PK +L+ L+ + + +A +F+ A++ P + S+ VY +LR+L + +
Sbjct: 2 VVFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNH 61
Query: 115 MRRVLEEMKLSGCEVDRGIFLIFIESYAKFDLYDEVMGIIKVMEDEYRIKPDTRFYNVLL 174
+ R++E ++ C+ D + L I++Y K + D+ + + K M + + +P R YN LL
Sbjct: 62 VSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLL 121
Query: 175 NVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMPNYGLS 234
N V+A + VES + + ++ T+N+LIK CK + A ++ M G
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK 181
Query: 235 PDETTFTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSF 294
PD +++T++ + G LD AL + ++M E G N+LI+GF K+ A+
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 295 IQEAANE-GFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLISGLC 354
+ P+ T+N +++GL K G +++ + M + D+YTY+SLI GLC
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 355 KVGEIEEAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGILPDVC 414
G +++A + +++ R S + VTYNT++ C+ +++E+ E+ R++ K + ++
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIV 361
Query: 415 TFNSLIQGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNLLKEM 474
++N LI+GL +G A ++ M KG D+ TY + I LC +G + +AL +++E+
Sbjct: 362 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 421
Query: 475 ESNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCKRRRV 534
ES+G +V Y ++ID CK KR+EEA + EM G+ +S N LI GL + R+
Sbjct: 422 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 481
Query: 535 EDAAHLMDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVTYGTL 594
+A+ + +M G +P +YN L+ CKAG +A+ V+ M +G PD+ TY L
Sbjct: 482 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 541
Query: 595 IGGLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMSEKAD 654
+ GLC+ ++ +A L G+ +N +I L + +AM + M +
Sbjct: 542 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 601
Query: 655 PPDAITYKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLC 705
+ +TY + G G V + M + G P+ S+ + +GLC
Sbjct: 602 TANLVTYNTLMEGFFKVGDSNRATVIWGY-MYKMGLQPDIISYNTIMKGLC 650
BLAST of Sgr017238 vs. TAIR 10
Match:
AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 331.6 bits (849), Expect = 2.0e-90
Identity = 185/547 (33.82%), Postives = 289/547 (52.83%), Query Frame = 0
Query: 170 YNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQIRPAILMMEEMP 229
+N LL+ + NK LV S M RI +D+ ++NILI C+ Q+ A+ ++ +M
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 230 NYGLSPDETTFTTLMQGYIEEGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRID 289
G PD T ++L+ GY + A+ + +QM VT N LI+G +
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 290 QALSFIQEAANEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGFDPDIYTYNSLI 349
+A++ I G +PD FTY T+VNGLCK G A+ ++ M G + D+ Y ++I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 350 SGLCKVGEIEEAVKILDQMVSRDCSPNAVTYNTLISSLCKENRVEEATEIARLLSSKGIL 409
LC + +A+ + +M ++ PN VTYN+LI LC R +A+ + + + I
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 410 PDVCTFNSLIQGLCSSGNHRNAMELFEEMKGKGCRPDEFTYNMLIDSLCSSGRLEEALNL 469
P+V TF++LI G A +L++EM + PD FTY+ LI+ C RL+EA ++
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 470 LKEMESNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRDSVTYNTLIDGLCK 529
+ M S C NVV YNTLI GFCK KR+EE E+F EM +G+ ++VTYNTLI GL +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 530 RRRVEDAAHLMDQMIMVGLKPDKFTYNSLLTHFCKAGDIKKAADIVQTMTSSGCNPDIVT 589
+ A + +M+ G+ PD TY+ LL CK G ++KA + + + S PDI T
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 590 YGTLIGGLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMS 649
Y +I G+CKAG+++ L S+ +KG+ Y +I ++ EA LFREM
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 650 EKADPPDAITYKIVYRGLCNGGGPIAEAVDFTVEMIERGNIPEFSSFAMLAEGLCTLAME 709
E P++ TY + R G A A + EM G + + S+ +M+ L +E
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASA-ELIKEMRSCGFVGDASTISMVINMLHDGRLE 622
Query: 710 DTLVKLV 717
+ ++++
Sbjct: 623 KSYLEML 628
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022143855.1 | 0.0e+00 | 94.44 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Momordica ... | [more] |
XP_038881185.1 | 0.0e+00 | 92.47 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Benincasa ... | [more] |
XP_008447642.1 | 0.0e+00 | 92.07 | PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic ... | [more] |
XP_004142210.1 | 0.0e+00 | 91.68 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Cucumis sa... | [more] |
KAG6595306.1 | 0.0e+00 | 91.41 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q9LFF1 | 3.6e-299 | 66.19 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9FMF6 | 6.6e-99 | 31.03 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Q9CA58 | 8.0e-97 | 31.19 | Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... | [more] |
Q9SS81 | 3.9e-91 | 28.73 | Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX... | [more] |
Q9LQ14 | 2.8e-89 | 33.82 | Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CPZ4 | 0.0e+00 | 94.44 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Momordic... | [more] |
A0A5A7SQ06 | 0.0e+00 | 92.07 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BHC3 | 0.0e+00 | 92.07 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucumis ... | [more] |
A0A6J1I5N1 | 0.0e+00 | 91.28 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucurbit... | [more] |
A0A6J1HFU3 | 0.0e+00 | 91.28 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
AT3G53700.1 | 2.6e-300 | 66.19 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G64320.1 | 4.7e-100 | 31.03 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G74580.1 | 5.7e-98 | 31.19 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G09060.1 | 2.7e-92 | 28.73 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G62930.1 | 2.0e-90 | 33.82 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |